HEADER CELL ADHESION 24-JUL-09 3IFQ TITLE INTERCTION OF PLAKOGLOBIN AND BETA-CATENIN WITH DESMOSOMAL CADHERINS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PLAKOGLOBIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 124-676; COMPND 5 SYNONYM: DESMOPLAKIN-3, DESMOPLAKIN III, CATENIN GAMMA; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: E-CADHERIN; COMPND 9 CHAIN: C, D; COMPND 10 FRAGMENT: RESIDUES 778-884; COMPND 11 SYNONYM: EPITHELIAL CADHERIN, CADHERIN-1, UVOMORULIN, ARC-1, E- COMPND 12 CAD/CTF1, E-CAD/CTF2, E-CAD/CTF3; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: JUP, CTNNG, DP3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 12 ORGANISM_COMMON: MOUSE; SOURCE 13 ORGANISM_TAXID: 10090; SOURCE 14 GENE: CDH1; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS ARMADILLO REPEAT, ACETYLATION, CARDIOMYOPATHY, CELL ADHESION, CELL KEYWDS 2 JUNCTION, CYTOPLASM, CYTOSKELETON, DISEASE MUTATION, MEMBRANE, KEYWDS 3 PALMOPLANTAR KERATODERMA, PHOSPHOPROTEIN, POLYMORPHISM, CALCIUM, KEYWDS 4 CELL MEMBRANE, CLEAVAGE ON PAIR OF BASIC RESIDUES, DISULFIDE BOND, KEYWDS 5 GLYCOPROTEIN, TRANSMEMBRANE EXPDTA X-RAY DIFFRACTION AUTHOR H.-J.CHOI,J.C.GROSS,S.POKUTTA,W.I.WEIS REVDAT 3 06-SEP-23 3IFQ 1 REMARK LINK REVDAT 2 24-NOV-09 3IFQ 1 JRNL REVDAT 1 15-SEP-09 3IFQ 0 JRNL AUTH H.J.CHOI,J.C.GROSS,S.POKUTTA,W.I.WEIS JRNL TITL INTERACTIONS OF PLAKOGLOBIN AND BETA-CATENIN WITH DESMOSOMAL JRNL TITL 2 CADHERINS: BASIS OF SELECTIVE EXCLUSION OF ALPHA- AND JRNL TITL 3 BETA-CATENIN FROM DESMOSOMES. JRNL REF J.BIOL.CHEM. V. 284 31776 2009 JRNL REFN ISSN 0021-9258 JRNL PMID 19759396 JRNL DOI 10.1074/JBC.M109.047928 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 34192 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.010 REMARK 3 FREE R VALUE TEST SET COUNT : 3424 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.7914 - 8.0617 0.92 1253 144 0.1456 0.1859 REMARK 3 2 8.0617 - 6.4048 0.99 1307 144 0.1574 0.2099 REMARK 3 3 6.4048 - 5.5969 0.99 1279 171 0.2046 0.2838 REMARK 3 4 5.5969 - 5.0860 0.99 1284 145 0.1782 0.2700 REMARK 3 5 5.0860 - 4.7219 0.99 1273 153 0.1614 0.2506 REMARK 3 6 4.7219 - 4.4437 1.00 1293 162 0.1491 0.2187 REMARK 3 7 4.4437 - 4.2214 0.99 1266 142 0.1577 0.2077 REMARK 3 8 4.2214 - 4.0377 0.99 1292 164 0.1632 0.2302 REMARK 3 9 4.0377 - 3.8824 0.99 1285 145 0.1705 0.2430 REMARK 3 10 3.8824 - 3.7485 0.99 1299 145 0.1820 0.2343 REMARK 3 11 3.7485 - 3.6313 0.99 1243 135 0.1857 0.2802 REMARK 3 12 3.6313 - 3.5276 1.00 1309 161 0.2172 0.3089 REMARK 3 13 3.5276 - 3.4347 1.00 1269 152 0.2295 0.3052 REMARK 3 14 3.4347 - 3.3510 1.00 1294 149 0.2466 0.3395 REMARK 3 15 3.3510 - 3.2748 1.00 1293 125 0.2537 0.3587 REMARK 3 16 3.2748 - 3.2051 1.00 1297 112 0.2631 0.3516 REMARK 3 17 3.2051 - 3.1411 1.00 1279 164 0.2528 0.3216 REMARK 3 18 3.1411 - 3.0818 1.00 1313 118 0.2601 0.3157 REMARK 3 19 3.0818 - 3.0268 1.00 1299 131 0.2712 0.3683 REMARK 3 20 3.0268 - 2.9755 0.99 1310 123 0.2680 0.3472 REMARK 3 21 2.9755 - 2.9275 0.99 1274 118 0.2600 0.3036 REMARK 3 22 2.9275 - 2.8824 1.00 1302 133 0.2738 0.3024 REMARK 3 23 2.8824 - 2.8401 0.99 1251 157 0.2846 0.3738 REMARK 3 24 2.8401 - 2.8000 0.94 1204 131 0.3033 0.3905 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 51.81 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.450 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.730 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 83.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 93.08 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -15.35640 REMARK 3 B22 (A**2) : 4.43350 REMARK 3 B33 (A**2) : 10.92290 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 3.88410 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 9873 REMARK 3 ANGLE : 0.619 13434 REMARK 3 CHIRALITY : 0.042 1604 REMARK 3 PLANARITY : 0.003 1741 REMARK 3 DIHEDRAL : 14.402 3658 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN D AND RESID 699-721 REMARK 3 ORIGIN FOR THE GROUP (A): -7.5279 -30.5596 68.0396 REMARK 3 T TENSOR REMARK 3 T11: 0.7303 T22: 0.6896 REMARK 3 T33: 0.5678 T12: -0.0577 REMARK 3 T13: -0.0195 T23: 0.0133 REMARK 3 L TENSOR REMARK 3 L11: 0.7446 L22: 0.4878 REMARK 3 L33: 1.9340 L12: 0.5647 REMARK 3 L13: 0.9421 L23: -0.7339 REMARK 3 S TENSOR REMARK 3 S11: 0.0330 S12: 0.3322 S13: 0.0324 REMARK 3 S21: 0.1121 S22: 0.1553 S23: 0.0118 REMARK 3 S31: 0.1671 S32: -0.1918 S33: -0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3IFQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-JUL-09. REMARK 100 THE DEPOSITION ID IS D_1000054353. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-DEC-08 REMARK 200 TEMPERATURE (KELVIN) : 193 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34257 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.09700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.8900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : 0.40000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1I7W REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 17% PEG 3350, 0.1M AMMONIUM SULFATE, REMARK 280 0.1M TRIS-CL, PH 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 289.5K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 38.07500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 17270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 51040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -76.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 76.04300 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 124 REMARK 465 SER A 125 REMARK 465 ASP A 659 REMARK 465 TYR A 660 REMARK 465 LYS A 674 REMARK 465 HIS A 675 REMARK 465 ASP A 676 REMARK 465 LYS B 124 REMARK 465 SER B 125 REMARK 465 VAL B 542 REMARK 465 ALA B 543 REMARK 465 ALA B 544 REMARK 465 GLY B 545 REMARK 465 THR B 546 REMARK 465 GLN B 547 REMARK 465 GLN B 548 REMARK 465 PRO B 549 REMARK 465 TYR B 550 REMARK 465 ASN B 657 REMARK 465 PRO B 658 REMARK 465 ASP B 659 REMARK 465 TYR B 660 REMARK 465 ARG B 661 REMARK 465 LYS B 674 REMARK 465 HIS B 675 REMARK 465 ASP B 676 REMARK 465 LEU C 622 REMARK 465 ASP C 623 REMARK 465 ALA C 624 REMARK 465 ARG C 625 REMARK 465 PRO C 626 REMARK 465 GLU C 627 REMARK 465 SER C 697 REMARK 465 GLU C 698 REMARK 465 SER C 699 REMARK 465 ASP C 700 REMARK 465 GLN C 701 REMARK 465 GLU C 726 REMARK 465 ASP C 727 REMARK 465 ASP C 728 REMARK 465 LEU D 622 REMARK 465 ASP D 623 REMARK 465 ALA D 624 REMARK 465 ARG D 625 REMARK 465 PRO D 626 REMARK 465 GLU D 627 REMARK 465 SER D 696 REMARK 465 SER D 697 REMARK 465 GLU D 698 REMARK 465 TYR D 722 REMARK 465 GLY D 723 REMARK 465 GLY D 724 REMARK 465 GLY D 725 REMARK 465 GLU D 726 REMARK 465 ASP D 727 REMARK 465 ASP D 728 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 661 CG CD NE CZ NH1 NH2 REMARK 470 HIS B 541 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 156 C - N - CA ANGL. DEV. = 9.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 324 104.37 -59.68 REMARK 500 ASN A 422 86.32 -153.76 REMARK 500 ASN A 432 51.92 -112.25 REMARK 500 ASP A 552 72.55 -68.39 REMARK 500 ASP B 153 107.09 -54.52 REMARK 500 ASP B 155 97.66 -161.81 REMARK 500 ASN B 195 -66.31 -120.14 REMARK 500 GLU B 240 -71.51 -44.01 REMARK 500 TYR B 256 -63.00 -133.25 REMARK 500 ASN B 280 45.43 -86.90 REMARK 500 ASN B 490 47.80 -104.73 REMARK 500 PRO B 492 -101.07 -55.01 REMARK 500 GLN B 494 72.57 -113.09 REMARK 500 ASP B 552 71.94 -69.05 REMARK 500 ASN B 670 63.22 -69.38 REMARK 500 PRO C 647 -173.44 -69.63 REMARK 500 PRO C 650 2.00 -60.05 REMARK 500 SER C 666 56.00 -115.87 REMARK 500 ASP C 680 48.46 -149.80 REMARK 500 GLN C 703 -31.93 -132.53 REMARK 500 TYR C 722 -90.84 -100.58 REMARK 500 VAL D 678 97.43 -69.93 REMARK 500 ASP D 680 47.48 -153.29 REMARK 500 GLU D 682 30.21 -95.99 REMARK 500 SER D 690 76.18 45.11 REMARK 500 ASN D 713 -74.18 -82.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 103 DBREF 3IFQ A 124 676 UNP P14923 PLAK_HUMAN 124 676 DBREF 3IFQ B 124 676 UNP P14923 PLAK_HUMAN 124 676 DBREF 3IFQ C 622 728 UNP P09803 CADH1_MOUSE 778 884 DBREF 3IFQ D 622 728 UNP P09803 CADH1_MOUSE 778 884 SEQRES 1 A 553 LYS SER ALA ILE VAL HIS LEU ILE ASN TYR GLN ASP ASP SEQRES 2 A 553 ALA GLU LEU ALA THR ARG ALA LEU PRO GLU LEU THR LYS SEQRES 3 A 553 LEU LEU ASN ASP GLU ASP PRO VAL VAL VAL THR LYS ALA SEQRES 4 A 553 ALA MET ILE VAL ASN GLN LEU SER LYS LYS GLU ALA SER SEQRES 5 A 553 ARG ARG ALA LEU MET GLY SER PRO GLN LEU VAL ALA ALA SEQRES 6 A 553 VAL VAL ARG THR MET GLN ASN THR SER ASP LEU ASP THR SEQRES 7 A 553 ALA ARG CYS THR THR SER ILE LEU HIS ASN LEU SER HIS SEQRES 8 A 553 HIS ARG GLU GLY LEU LEU ALA ILE PHE LYS SER GLY GLY SEQRES 9 A 553 ILE PRO ALA LEU VAL ARG MET LEU SER SER PRO VAL GLU SEQRES 10 A 553 SER VAL LEU PHE TYR ALA ILE THR THR LEU HIS ASN LEU SEQRES 11 A 553 LEU LEU TYR GLN GLU GLY ALA LYS MET ALA VAL ARG LEU SEQRES 12 A 553 ALA ASP GLY LEU GLN LYS MET VAL PRO LEU LEU ASN LYS SEQRES 13 A 553 ASN ASN PRO LYS PHE LEU ALA ILE THR THR ASP CYS LEU SEQRES 14 A 553 GLN LEU LEU ALA TYR GLY ASN GLN GLU SER LYS LEU ILE SEQRES 15 A 553 ILE LEU ALA ASN GLY GLY PRO GLN ALA LEU VAL GLN ILE SEQRES 16 A 553 MET ARG ASN TYR SER TYR GLU LYS LEU LEU TRP THR THR SEQRES 17 A 553 SER ARG VAL LEU LYS VAL LEU SER VAL CYS PRO SER ASN SEQRES 18 A 553 LYS PRO ALA ILE VAL GLU ALA GLY GLY MET GLN ALA LEU SEQRES 19 A 553 GLY LYS HIS LEU THR SER ASN SER PRO ARG LEU VAL GLN SEQRES 20 A 553 ASN CYS LEU TRP THR LEU ARG ASN LEU SER ASP VAL ALA SEQRES 21 A 553 THR LYS GLN GLU GLY LEU GLU SER VAL LEU LYS ILE LEU SEQRES 22 A 553 VAL ASN GLN LEU SER VAL ASP ASP VAL ASN VAL LEU THR SEQRES 23 A 553 CYS ALA THR GLY THR LEU SER ASN LEU THR CYS ASN ASN SEQRES 24 A 553 SER LYS ASN LYS THR LEU VAL THR GLN ASN SER GLY VAL SEQRES 25 A 553 GLU ALA LEU ILE HIS ALA ILE LEU ARG ALA GLY ASP LYS SEQRES 26 A 553 ASP ASP ILE THR GLU PRO ALA VAL CYS ALA LEU ARG HIS SEQRES 27 A 553 LEU THR SER ARG HIS PRO GLU ALA GLU MET ALA GLN ASN SEQRES 28 A 553 SER VAL ARG LEU ASN TYR GLY ILE PRO ALA ILE VAL LYS SEQRES 29 A 553 LEU LEU ASN GLN PRO ASN GLN TRP PRO LEU VAL LYS ALA SEQRES 30 A 553 THR ILE GLY LEU ILE ARG ASN LEU ALA LEU CYS PRO ALA SEQRES 31 A 553 ASN HIS ALA PRO LEU GLN GLU ALA ALA VAL ILE PRO ARG SEQRES 32 A 553 LEU VAL GLN LEU LEU VAL LYS ALA HIS GLN ASP ALA GLN SEQRES 33 A 553 ARG HIS VAL ALA ALA GLY THR GLN GLN PRO TYR THR ASP SEQRES 34 A 553 GLY VAL ARG MET GLU GLU ILE VAL GLU GLY CYS THR GLY SEQRES 35 A 553 ALA LEU HIS ILE LEU ALA ARG ASP PRO MET ASN ARG MET SEQRES 36 A 553 GLU ILE PHE ARG LEU ASN THR ILE PRO LEU PHE VAL GLN SEQRES 37 A 553 LEU LEU TYR SER SER VAL GLU ASN ILE GLN ARG VAL ALA SEQRES 38 A 553 ALA GLY VAL LEU CYS GLU LEU ALA GLN ASP LYS GLU ALA SEQRES 39 A 553 ALA ASP ALA ILE ASP ALA GLU GLY ALA SER ALA PRO LEU SEQRES 40 A 553 MET GLU LEU LEU HIS SER ARG ASN GLU GLY THR ALA THR SEQRES 41 A 553 TYR ALA ALA ALA VAL LEU PHE ARG ILE SER GLU ASP LYS SEQRES 42 A 553 ASN PRO ASP TYR ARG LYS ARG VAL SER VAL GLU LEU THR SEQRES 43 A 553 ASN SER LEU PHE LYS HIS ASP SEQRES 1 B 553 LYS SER ALA ILE VAL HIS LEU ILE ASN TYR GLN ASP ASP SEQRES 2 B 553 ALA GLU LEU ALA THR ARG ALA LEU PRO GLU LEU THR LYS SEQRES 3 B 553 LEU LEU ASN ASP GLU ASP PRO VAL VAL VAL THR LYS ALA SEQRES 4 B 553 ALA MET ILE VAL ASN GLN LEU SER LYS LYS GLU ALA SER SEQRES 5 B 553 ARG ARG ALA LEU MET GLY SER PRO GLN LEU VAL ALA ALA SEQRES 6 B 553 VAL VAL ARG THR MET GLN ASN THR SER ASP LEU ASP THR SEQRES 7 B 553 ALA ARG CYS THR THR SER ILE LEU HIS ASN LEU SER HIS SEQRES 8 B 553 HIS ARG GLU GLY LEU LEU ALA ILE PHE LYS SER GLY GLY SEQRES 9 B 553 ILE PRO ALA LEU VAL ARG MET LEU SER SER PRO VAL GLU SEQRES 10 B 553 SER VAL LEU PHE TYR ALA ILE THR THR LEU HIS ASN LEU SEQRES 11 B 553 LEU LEU TYR GLN GLU GLY ALA LYS MET ALA VAL ARG LEU SEQRES 12 B 553 ALA ASP GLY LEU GLN LYS MET VAL PRO LEU LEU ASN LYS SEQRES 13 B 553 ASN ASN PRO LYS PHE LEU ALA ILE THR THR ASP CYS LEU SEQRES 14 B 553 GLN LEU LEU ALA TYR GLY ASN GLN GLU SER LYS LEU ILE SEQRES 15 B 553 ILE LEU ALA ASN GLY GLY PRO GLN ALA LEU VAL GLN ILE SEQRES 16 B 553 MET ARG ASN TYR SER TYR GLU LYS LEU LEU TRP THR THR SEQRES 17 B 553 SER ARG VAL LEU LYS VAL LEU SER VAL CYS PRO SER ASN SEQRES 18 B 553 LYS PRO ALA ILE VAL GLU ALA GLY GLY MET GLN ALA LEU SEQRES 19 B 553 GLY LYS HIS LEU THR SER ASN SER PRO ARG LEU VAL GLN SEQRES 20 B 553 ASN CYS LEU TRP THR LEU ARG ASN LEU SER ASP VAL ALA SEQRES 21 B 553 THR LYS GLN GLU GLY LEU GLU SER VAL LEU LYS ILE LEU SEQRES 22 B 553 VAL ASN GLN LEU SER VAL ASP ASP VAL ASN VAL LEU THR SEQRES 23 B 553 CYS ALA THR GLY THR LEU SER ASN LEU THR CYS ASN ASN SEQRES 24 B 553 SER LYS ASN LYS THR LEU VAL THR GLN ASN SER GLY VAL SEQRES 25 B 553 GLU ALA LEU ILE HIS ALA ILE LEU ARG ALA GLY ASP LYS SEQRES 26 B 553 ASP ASP ILE THR GLU PRO ALA VAL CYS ALA LEU ARG HIS SEQRES 27 B 553 LEU THR SER ARG HIS PRO GLU ALA GLU MET ALA GLN ASN SEQRES 28 B 553 SER VAL ARG LEU ASN TYR GLY ILE PRO ALA ILE VAL LYS SEQRES 29 B 553 LEU LEU ASN GLN PRO ASN GLN TRP PRO LEU VAL LYS ALA SEQRES 30 B 553 THR ILE GLY LEU ILE ARG ASN LEU ALA LEU CYS PRO ALA SEQRES 31 B 553 ASN HIS ALA PRO LEU GLN GLU ALA ALA VAL ILE PRO ARG SEQRES 32 B 553 LEU VAL GLN LEU LEU VAL LYS ALA HIS GLN ASP ALA GLN SEQRES 33 B 553 ARG HIS VAL ALA ALA GLY THR GLN GLN PRO TYR THR ASP SEQRES 34 B 553 GLY VAL ARG MET GLU GLU ILE VAL GLU GLY CYS THR GLY SEQRES 35 B 553 ALA LEU HIS ILE LEU ALA ARG ASP PRO MET ASN ARG MET SEQRES 36 B 553 GLU ILE PHE ARG LEU ASN THR ILE PRO LEU PHE VAL GLN SEQRES 37 B 553 LEU LEU TYR SER SER VAL GLU ASN ILE GLN ARG VAL ALA SEQRES 38 B 553 ALA GLY VAL LEU CYS GLU LEU ALA GLN ASP LYS GLU ALA SEQRES 39 B 553 ALA ASP ALA ILE ASP ALA GLU GLY ALA SER ALA PRO LEU SEQRES 40 B 553 MET GLU LEU LEU HIS SER ARG ASN GLU GLY THR ALA THR SEQRES 41 B 553 TYR ALA ALA ALA VAL LEU PHE ARG ILE SER GLU ASP LYS SEQRES 42 B 553 ASN PRO ASP TYR ARG LYS ARG VAL SER VAL GLU LEU THR SEQRES 43 B 553 ASN SER LEU PHE LYS HIS ASP SEQRES 1 C 107 LEU ASP ALA ARG PRO GLU VAL THR ARG ASN ASP VAL ALA SEQRES 2 C 107 PRO THR LEU MET SER VAL PRO GLN TYR ARG PRO ARG PRO SEQRES 3 C 107 ALA ASN PRO ASP GLU ILE GLY ASN PHE ILE ASP GLU ASN SEQRES 4 C 107 LEU LYS ALA ALA ASP SER ASP PRO THR ALA PRO PRO TYR SEQRES 5 C 107 ASP SER LEU LEU VAL PHE ASP TYR GLU GLY SEP GLY SEP SEQRES 6 C 107 GLU ALA ALA SER LEU SEP SER LEU ASN SER SER GLU SER SEQRES 7 C 107 ASP GLN ASP GLN ASP TYR ASP TYR LEU ASN GLU TRP GLY SEQRES 8 C 107 ASN ARG PHE LYS LYS LEU ALA ASP MET TYR GLY GLY GLY SEQRES 9 C 107 GLU ASP ASP SEQRES 1 D 107 LEU ASP ALA ARG PRO GLU VAL THR ARG ASN ASP VAL ALA SEQRES 2 D 107 PRO THR LEU MET SER VAL PRO GLN TYR ARG PRO ARG PRO SEQRES 3 D 107 ALA ASN PRO ASP GLU ILE GLY ASN PHE ILE ASP GLU ASN SEQRES 4 D 107 LEU LYS ALA ALA ASP SER ASP PRO THR ALA PRO PRO TYR SEQRES 5 D 107 ASP SER LEU LEU VAL PHE ASP TYR GLU GLY SEP GLY SEP SEQRES 6 D 107 GLU ALA ALA SER LEU SEP SER LEU ASN SER SER GLU SER SEQRES 7 D 107 ASP GLN ASP GLN ASP TYR ASP TYR LEU ASN GLU TRP GLY SEQRES 8 D 107 ASN ARG PHE LYS LYS LEU ALA ASP MET TYR GLY GLY GLY SEQRES 9 D 107 GLU ASP ASP MODRES 3IFQ SEP C 684 SER PHOSPHOSERINE MODRES 3IFQ SEP C 686 SER PHOSPHOSERINE MODRES 3IFQ SEP C 692 SER PHOSPHOSERINE MODRES 3IFQ SEP D 684 SER PHOSPHOSERINE MODRES 3IFQ SEP D 686 SER PHOSPHOSERINE MODRES 3IFQ SEP D 692 SER PHOSPHOSERINE HET SEP C 684 10 HET SEP C 686 10 HET SEP C 692 10 HET SEP D 684 10 HET SEP D 686 10 HET SEP D 692 10 HET SO4 A 101 5 HET SO4 A 103 5 HET SO4 B 102 5 HETNAM SEP PHOSPHOSERINE HETNAM SO4 SULFATE ION HETSYN SEP PHOSPHONOSERINE FORMUL 3 SEP 6(C3 H8 N O6 P) FORMUL 5 SO4 3(O4 S 2-) HELIX 1 1 ALA A 126 ASN A 132 1 7 HELIX 2 2 ASN A 132 ALA A 143 1 12 HELIX 3 3 ALA A 143 ASN A 152 1 10 HELIX 4 4 ASP A 155 SER A 170 1 16 HELIX 5 5 LYS A 172 GLY A 181 1 10 HELIX 6 6 SER A 182 GLN A 194 1 13 HELIX 7 7 ASP A 198 SER A 213 1 16 HELIX 8 8 HIS A 215 SER A 225 1 11 HELIX 9 9 GLY A 226 MET A 234 1 9 HELIX 10 10 LEU A 235 SER A 237 5 3 HELIX 11 11 VAL A 239 GLN A 257 1 19 HELIX 12 12 GLY A 259 ALA A 267 1 9 HELIX 13 13 ASP A 268 LYS A 279 5 12 HELIX 14 14 ASN A 281 TYR A 297 1 17 HELIX 15 15 ASN A 299 ASN A 309 1 11 HELIX 16 16 GLY A 310 TYR A 322 1 13 HELIX 17 17 TYR A 324 SER A 339 1 16 HELIX 18 18 SER A 343 ALA A 351 1 9 HELIX 19 19 GLY A 352 LYS A 359 1 8 HELIX 20 20 HIS A 360 SER A 363 5 4 HELIX 21 21 SER A 365 ASP A 381 1 17 HELIX 22 22 LEU A 389 ASN A 398 1 10 HELIX 23 23 ASP A 404 THR A 419 1 16 HELIX 24 24 ASN A 422 THR A 430 1 9 HELIX 25 25 SER A 433 GLY A 446 1 14 HELIX 26 26 LYS A 448 THR A 463 1 16 HELIX 27 27 GLU A 468 LEU A 478 1 11 HELIX 28 28 TYR A 480 LEU A 488 1 9 HELIX 29 29 LEU A 489 GLN A 491 5 3 HELIX 30 30 GLN A 494 ALA A 509 1 16 HELIX 31 31 LEU A 510 ALA A 513 5 4 HELIX 32 32 ASN A 514 ALA A 521 1 8 HELIX 33 33 ALA A 522 ALA A 544 1 23 HELIX 34 34 ARG A 555 ALA A 571 1 17 HELIX 35 35 ASP A 573 LEU A 583 1 11 HELIX 36 36 THR A 585 LEU A 593 1 9 HELIX 37 37 VAL A 597 ALA A 612 1 16 HELIX 38 38 ASP A 614 GLU A 624 1 11 HELIX 39 39 ALA A 626 LEU A 634 1 9 HELIX 40 40 ASN A 638 ILE A 652 1 15 HELIX 41 41 ARG A 661 LEU A 668 1 8 HELIX 42 42 ALA B 126 ASN B 132 1 7 HELIX 43 43 ASN B 132 ARG B 142 1 11 HELIX 44 44 ALA B 143 ASP B 153 1 11 HELIX 45 45 ASP B 155 SER B 170 1 16 HELIX 46 46 LYS B 172 SER B 182 1 11 HELIX 47 47 SER B 182 GLN B 194 1 13 HELIX 48 48 ASP B 198 SER B 213 1 16 HELIX 49 49 HIS B 215 SER B 225 1 11 HELIX 50 50 GLY B 226 MET B 234 1 9 HELIX 51 51 VAL B 239 TYR B 256 1 18 HELIX 52 52 ALA B 260 ALA B 267 1 8 HELIX 53 53 ASP B 268 VAL B 274 1 7 HELIX 54 54 PRO B 275 LEU B 277 5 3 HELIX 55 55 ASN B 281 TYR B 297 1 17 HELIX 56 56 ASN B 299 ASN B 309 1 11 HELIX 57 57 GLY B 310 TYR B 322 1 13 HELIX 58 58 TYR B 324 SER B 339 1 16 HELIX 59 59 SER B 343 ALA B 351 1 9 HELIX 60 60 GLY B 352 LYS B 359 1 8 HELIX 61 61 HIS B 360 SER B 363 5 4 HELIX 62 62 SER B 365 SER B 380 1 16 HELIX 63 63 LEU B 389 GLN B 399 1 11 HELIX 64 64 ASP B 404 THR B 419 1 16 HELIX 65 65 ASN B 422 GLN B 431 1 10 HELIX 66 66 SER B 433 GLY B 446 1 14 HELIX 67 67 ILE B 451 THR B 463 1 13 HELIX 68 68 GLU B 468 ASN B 479 1 12 HELIX 69 69 TYR B 480 LEU B 488 1 9 HELIX 70 70 LEU B 489 GLN B 491 5 3 HELIX 71 71 GLN B 494 CYS B 511 1 18 HELIX 72 72 ASN B 514 ALA B 521 1 8 HELIX 73 73 ALA B 522 HIS B 541 1 20 HELIX 74 74 ARG B 555 ALA B 571 1 17 HELIX 75 75 ASP B 573 LEU B 583 1 11 HELIX 76 76 THR B 585 LEU B 593 1 9 HELIX 77 77 VAL B 597 ALA B 612 1 16 HELIX 78 78 ASP B 614 GLU B 624 1 11 HELIX 79 79 ALA B 626 LEU B 634 1 9 HELIX 80 80 ASN B 638 ILE B 652 1 15 HELIX 81 81 LYS B 662 ASN B 670 1 9 HELIX 82 82 GLU C 652 ASP C 665 1 14 HELIX 83 83 TYR C 705 TRP C 711 5 7 HELIX 84 84 GLY C 712 ARG C 714 5 3 HELIX 85 85 PHE C 715 ASP C 720 1 6 HELIX 86 86 ASN D 649 ASP D 651 5 3 HELIX 87 87 GLU D 652 ASP D 665 1 14 HELIX 88 88 TYR D 705 TRP D 711 5 7 HELIX 89 89 PHE D 715 MET D 721 1 7 SHEET 1 A 2 THR C 629 VAL C 633 0 SHEET 2 A 2 ASP C 674 VAL C 678 -1 O LEU C 676 N ASN C 631 SHEET 1 B 2 THR D 629 VAL D 633 0 SHEET 2 B 2 ASP D 674 VAL D 678 -1 O ASP D 674 N VAL D 633 LINK C GLY C 683 N SEP C 684 1555 1555 1.33 LINK C SEP C 684 N GLY C 685 1555 1555 1.33 LINK C GLY C 685 N SEP C 686 1555 1555 1.33 LINK C SEP C 686 N GLU C 687 1555 1555 1.33 LINK C LEU C 691 N SEP C 692 1555 1555 1.33 LINK C SEP C 692 N SER C 693 1555 1555 1.33 LINK C GLY D 683 N SEP D 684 1555 1555 1.33 LINK C SEP D 684 N GLY D 685 1555 1555 1.33 LINK C GLY D 685 N SEP D 686 1555 1555 1.33 LINK C SEP D 686 N GLU D 687 1555 1555 1.33 LINK C LEU D 691 N SEP D 692 1555 1555 1.33 LINK C SEP D 692 N SER D 693 1555 1555 1.33 CISPEP 1 PRO C 671 PRO C 672 0 3.14 CISPEP 2 PRO D 671 PRO D 672 0 6.45 SITE 1 AC1 3 ARG A 177 HIS A 215 ARG A 216 SITE 1 AC2 4 SO4 A 103 ARG B 177 HIS B 215 ARG B 216 SITE 1 AC3 7 GLN A 491 PRO A 492 TRP A 495 VAL A 498 SITE 2 AC3 7 LEU A 530 LYS A 533 SO4 B 102 CRYST1 76.043 76.150 122.940 90.00 97.15 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013150 0.000000 0.001650 0.00000 SCALE2 0.000000 0.013132 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008198 0.00000