data_3IG7 # _entry.id 3IG7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3IG7 RCSB RCSB054370 WWPDB D_1000054370 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3IGG _pdbx_database_related.details 'Same Protein bound to inhibitor EFQ' _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3IG7 _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-07-27 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # _audit_author.name 'Pandit, J.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;Potent and cellularly active 4-aminoimidazole inhibitors of cyclin-dependent kinase 5/p25 for the treatment of Alzheimer's disease. ; _citation.journal_abbrev Bioorg.Med.Chem.Lett. _citation.journal_volume 19 _citation.page_first 5703 _citation.page_last 5707 _citation.year 2009 _citation.journal_id_ASTM BMCLE8 _citation.country UK _citation.journal_id_ISSN 0960-894X _citation.journal_id_CSD 1127 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19700321 _citation.pdbx_database_id_DOI 10.1016/j.bmcl.2009.08.019 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Helal, C.J.' 1 primary 'Kang, Z.' 2 primary 'Lucas, J.C.' 3 primary 'Gant, T.' 4 primary 'Ahlijanian, M.K.' 5 primary 'Schachter, J.B.' 6 primary 'Richter, K.E.' 7 primary 'Cook, J.M.' 8 primary 'Menniti, F.S.' 9 primary 'Kelly, K.' 10 primary 'Mente, S.' 11 primary 'Pandit, J.' 12 primary 'Hosea, N.' 13 # _cell.entry_id 3IG7 _cell.length_a 53.343 _cell.length_b 70.994 _cell.length_c 71.811 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3IG7 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Cell division protein kinase 2' 34002.527 1 2.7.11.22 ? ? ? 2 non-polymer syn 'N-{1-[cis-3-(acetylamino)cyclobutyl]-1H-imidazol-4-yl}-2-(4-methoxyphenyl)acetamide' 342.392 1 ? ? ? ? 3 water nat water 18.015 66 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'p33 protein kinase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(ACE)MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLRL ; _entity_poly.pdbx_seq_one_letter_code_can ;XMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV FEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLRL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ACE n 1 2 MET n 1 3 GLU n 1 4 ASN n 1 5 PHE n 1 6 GLN n 1 7 LYS n 1 8 VAL n 1 9 GLU n 1 10 LYS n 1 11 ILE n 1 12 GLY n 1 13 GLU n 1 14 GLY n 1 15 THR n 1 16 TYR n 1 17 GLY n 1 18 VAL n 1 19 VAL n 1 20 TYR n 1 21 LYS n 1 22 ALA n 1 23 ARG n 1 24 ASN n 1 25 LYS n 1 26 LEU n 1 27 THR n 1 28 GLY n 1 29 GLU n 1 30 VAL n 1 31 VAL n 1 32 ALA n 1 33 LEU n 1 34 LYS n 1 35 LYS n 1 36 ILE n 1 37 ARG n 1 38 LEU n 1 39 ASP n 1 40 THR n 1 41 GLU n 1 42 THR n 1 43 GLU n 1 44 GLY n 1 45 VAL n 1 46 PRO n 1 47 SER n 1 48 THR n 1 49 ALA n 1 50 ILE n 1 51 ARG n 1 52 GLU n 1 53 ILE n 1 54 SER n 1 55 LEU n 1 56 LEU n 1 57 LYS n 1 58 GLU n 1 59 LEU n 1 60 ASN n 1 61 HIS n 1 62 PRO n 1 63 ASN n 1 64 ILE n 1 65 VAL n 1 66 LYS n 1 67 LEU n 1 68 LEU n 1 69 ASP n 1 70 VAL n 1 71 ILE n 1 72 HIS n 1 73 THR n 1 74 GLU n 1 75 ASN n 1 76 LYS n 1 77 LEU n 1 78 TYR n 1 79 LEU n 1 80 VAL n 1 81 PHE n 1 82 GLU n 1 83 PHE n 1 84 LEU n 1 85 HIS n 1 86 GLN n 1 87 ASP n 1 88 LEU n 1 89 LYS n 1 90 LYS n 1 91 PHE n 1 92 MET n 1 93 ASP n 1 94 ALA n 1 95 SER n 1 96 ALA n 1 97 LEU n 1 98 THR n 1 99 GLY n 1 100 ILE n 1 101 PRO n 1 102 LEU n 1 103 PRO n 1 104 LEU n 1 105 ILE n 1 106 LYS n 1 107 SER n 1 108 TYR n 1 109 LEU n 1 110 PHE n 1 111 GLN n 1 112 LEU n 1 113 LEU n 1 114 GLN n 1 115 GLY n 1 116 LEU n 1 117 ALA n 1 118 PHE n 1 119 CYS n 1 120 HIS n 1 121 SER n 1 122 HIS n 1 123 ARG n 1 124 VAL n 1 125 LEU n 1 126 HIS n 1 127 ARG n 1 128 ASP n 1 129 LEU n 1 130 LYS n 1 131 PRO n 1 132 GLN n 1 133 ASN n 1 134 LEU n 1 135 LEU n 1 136 ILE n 1 137 ASN n 1 138 THR n 1 139 GLU n 1 140 GLY n 1 141 ALA n 1 142 ILE n 1 143 LYS n 1 144 LEU n 1 145 ALA n 1 146 ASP n 1 147 PHE n 1 148 GLY n 1 149 LEU n 1 150 ALA n 1 151 ARG n 1 152 ALA n 1 153 PHE n 1 154 GLY n 1 155 VAL n 1 156 PRO n 1 157 VAL n 1 158 ARG n 1 159 THR n 1 160 TYR n 1 161 THR n 1 162 HIS n 1 163 GLU n 1 164 VAL n 1 165 VAL n 1 166 THR n 1 167 LEU n 1 168 TRP n 1 169 TYR n 1 170 ARG n 1 171 ALA n 1 172 PRO n 1 173 GLU n 1 174 ILE n 1 175 LEU n 1 176 LEU n 1 177 GLY n 1 178 CYS n 1 179 LYS n 1 180 TYR n 1 181 TYR n 1 182 SER n 1 183 THR n 1 184 ALA n 1 185 VAL n 1 186 ASP n 1 187 ILE n 1 188 TRP n 1 189 SER n 1 190 LEU n 1 191 GLY n 1 192 CYS n 1 193 ILE n 1 194 PHE n 1 195 ALA n 1 196 GLU n 1 197 MET n 1 198 VAL n 1 199 THR n 1 200 ARG n 1 201 ARG n 1 202 ALA n 1 203 LEU n 1 204 PHE n 1 205 PRO n 1 206 GLY n 1 207 ASP n 1 208 SER n 1 209 GLU n 1 210 ILE n 1 211 ASP n 1 212 GLN n 1 213 LEU n 1 214 PHE n 1 215 ARG n 1 216 ILE n 1 217 PHE n 1 218 ARG n 1 219 THR n 1 220 LEU n 1 221 GLY n 1 222 THR n 1 223 PRO n 1 224 ASP n 1 225 GLU n 1 226 VAL n 1 227 VAL n 1 228 TRP n 1 229 PRO n 1 230 GLY n 1 231 VAL n 1 232 THR n 1 233 SER n 1 234 MET n 1 235 PRO n 1 236 ASP n 1 237 TYR n 1 238 LYS n 1 239 PRO n 1 240 SER n 1 241 PHE n 1 242 PRO n 1 243 LYS n 1 244 TRP n 1 245 ALA n 1 246 ARG n 1 247 GLN n 1 248 ASP n 1 249 PHE n 1 250 SER n 1 251 LYS n 1 252 VAL n 1 253 VAL n 1 254 PRO n 1 255 PRO n 1 256 LEU n 1 257 ASP n 1 258 GLU n 1 259 ASP n 1 260 GLY n 1 261 ARG n 1 262 SER n 1 263 LEU n 1 264 LEU n 1 265 SER n 1 266 GLN n 1 267 MET n 1 268 LEU n 1 269 HIS n 1 270 TYR n 1 271 ASP n 1 272 PRO n 1 273 ASN n 1 274 LYS n 1 275 ARG n 1 276 ILE n 1 277 SER n 1 278 ALA n 1 279 LYS n 1 280 ALA n 1 281 ALA n 1 282 LEU n 1 283 ALA n 1 284 HIS n 1 285 PRO n 1 286 PHE n 1 287 PHE n 1 288 GLN n 1 289 ASP n 1 290 VAL n 1 291 THR n 1 292 LYS n 1 293 PRO n 1 294 VAL n 1 295 PRO n 1 296 HIS n 1 297 LEU n 1 298 ARG n 1 299 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene CDK2 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Spodoptera frugiperda' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CDK2_HUMAN _struct_ref.pdbx_db_accession P24941 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF EFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLRL ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3IG7 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 299 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P24941 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 298 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 298 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EFP non-polymer . 'N-{1-[cis-3-(acetylamino)cyclobutyl]-1H-imidazol-4-yl}-2-(4-methoxyphenyl)acetamide' ? 'C18 H22 N4 O3' 342.392 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3IG7 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.00 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 38.53 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS II' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RUH2R' _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 3IG7 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -2.0 _reflns.d_resolution_high 1.80 _reflns.d_resolution_low 50.00 _reflns.number_all 25951 _reflns.number_obs 25483 _reflns.percent_possible_obs 98.2 _reflns.pdbx_Rmerge_I_obs 0.063 _reflns.pdbx_Rsym_value 0.063 _reflns.pdbx_netI_over_sigmaI 17.05 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.86 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 97.4 _reflns_shell.Rmerge_I_obs 0.697 _reflns_shell.meanI_over_sigI_obs 1.66 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy ? _reflns_shell.number_unique_all 2478 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3IG7 _refine.ls_d_res_high 1.800 _refine.ls_d_res_low 36.67 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs ? _refine.ls_number_reflns_obs 24375 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details ? _refine.details ? _refine.ls_R_factor_all 0.209 _refine.ls_R_factor_obs 0.209 _refine.ls_R_factor_R_work 0.20839 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.25731 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 1294 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 33.199 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.solvent_model_details ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 99.23 _refine.B_iso_min 12.29 _refine.occupancy_max 1.00 _refine.occupancy_min 1.00 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2243 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 25 _refine_hist.number_atoms_solvent 66 _refine_hist.number_atoms_total 2334 _refine_hist.d_res_high 1.800 _refine_hist.d_res_low 36.67 # _struct.entry_id 3IG7 _struct.title 'Novel CDK-5 inhibitors - crystal structure of inhibitor EFP with CDK-2' _struct.pdbx_descriptor 'Cell division protein kinase 2 (E.C.2.7.11.22)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3IG7 _struct_keywords.text ;PROTEIN KINASE, TRANSFERASE, SERINE/THREONINE PROTEIN KINASE, ATP-BINDING, CELL CYCLE, CELL DIVISION, MITOSIS, 4-AMINOIMIDAZOLE, Kinase, Nucleotide-binding, Phosphoprotein, Polymorphism, Serine/threonine-protein kinase ; _struct_keywords.pdbx_keywords TRANSFERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 46 ? LYS A 57 ? PRO A 45 LYS A 56 1 ? 12 HELX_P HELX_P2 2 LEU A 88 ? SER A 95 ? LEU A 87 SER A 94 1 ? 8 HELX_P HELX_P3 3 PRO A 101 ? HIS A 122 ? PRO A 100 HIS A 121 1 ? 22 HELX_P HELX_P4 4 LYS A 130 ? GLN A 132 ? LYS A 129 GLN A 131 5 ? 3 HELX_P HELX_P5 5 GLY A 148 ? PHE A 153 ? GLY A 147 PHE A 152 1 ? 6 HELX_P HELX_P6 6 ALA A 171 ? LEU A 176 ? ALA A 170 LEU A 175 1 ? 6 HELX_P HELX_P7 7 THR A 183 ? ARG A 200 ? THR A 182 ARG A 199 1 ? 18 HELX_P HELX_P8 8 SER A 208 ? GLY A 221 ? SER A 207 GLY A 220 1 ? 14 HELX_P HELX_P9 9 GLY A 230 ? MET A 234 ? GLY A 229 MET A 233 5 ? 5 HELX_P HELX_P10 10 ASP A 248 ? VAL A 253 ? ASP A 247 VAL A 252 1 ? 6 HELX_P HELX_P11 11 ASP A 257 ? LEU A 268 ? ASP A 256 LEU A 267 1 ? 12 HELX_P HELX_P12 12 SER A 277 ? HIS A 284 ? SER A 276 HIS A 283 1 ? 8 HELX_P HELX_P13 13 PRO A 285 ? VAL A 290 ? PRO A 284 VAL A 289 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id ACE _struct_conn.ptnr1_label_seq_id 1 _struct_conn.ptnr1_label_atom_id C _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id MET _struct_conn.ptnr2_label_seq_id 2 _struct_conn.ptnr2_label_atom_id N _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id ACE _struct_conn.ptnr1_auth_seq_id 0 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id MET _struct_conn.ptnr2_auth_seq_id 1 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.322 _struct_conn.pdbx_value_order ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 5 ? GLU A 13 ? PHE A 4 GLU A 12 A 2 VAL A 18 ? ASN A 24 ? VAL A 17 ASN A 23 A 3 VAL A 30 ? ILE A 36 ? VAL A 29 ILE A 35 A 4 LYS A 76 ? GLU A 82 ? LYS A 75 GLU A 81 A 5 LEU A 67 ? THR A 73 ? LEU A 66 THR A 72 B 1 GLN A 86 ? ASP A 87 ? GLN A 85 ASP A 86 B 2 LEU A 134 ? ILE A 136 ? LEU A 133 ILE A 135 B 3 ILE A 142 ? LEU A 144 ? ILE A 141 LEU A 143 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 8 ? N VAL A 7 O LYS A 21 ? O LYS A 20 A 2 3 N TYR A 20 ? N TYR A 19 O LEU A 33 ? O LEU A 32 A 3 4 N ILE A 36 ? N ILE A 35 O LEU A 77 ? O LEU A 76 A 4 5 O LYS A 76 ? O LYS A 75 N THR A 73 ? N THR A 72 B 1 2 N GLN A 86 ? N GLN A 85 O ILE A 136 ? O ILE A 135 B 2 3 N LEU A 135 ? N LEU A 134 O LYS A 143 ? O LYS A 142 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 13 _struct_site.details 'BINDING SITE FOR RESIDUE EFP A 999' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 13 GLU A 9 ? GLU A 8 . ? 1_555 ? 2 AC1 13 ILE A 11 ? ILE A 10 . ? 1_555 ? 3 AC1 13 ALA A 32 ? ALA A 31 . ? 1_555 ? 4 AC1 13 LYS A 34 ? LYS A 33 . ? 1_555 ? 5 AC1 13 GLU A 82 ? GLU A 81 . ? 1_555 ? 6 AC1 13 PHE A 83 ? PHE A 82 . ? 1_555 ? 7 AC1 13 LEU A 84 ? LEU A 83 . ? 1_555 ? 8 AC1 13 HIS A 85 ? HIS A 84 . ? 1_555 ? 9 AC1 13 LYS A 90 ? LYS A 89 . ? 1_555 ? 10 AC1 13 LEU A 135 ? LEU A 134 . ? 1_555 ? 11 AC1 13 ASP A 146 ? ASP A 145 . ? 1_555 ? 12 AC1 13 HOH C . ? HOH A 336 . ? 1_555 ? 13 AC1 13 HOH C . ? HOH A 363 . ? 1_555 ? # _atom_sites.entry_id 3IG7 _atom_sites.fract_transf_matrix[1][1] 0.018747 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014086 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013925 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ACE 1 0 0 ACE ACE A . n A 1 2 MET 2 1 1 MET MET A . n A 1 3 GLU 3 2 2 GLU GLU A . n A 1 4 ASN 4 3 3 ASN ASN A . n A 1 5 PHE 5 4 4 PHE PHE A . n A 1 6 GLN 6 5 5 GLN GLN A . n A 1 7 LYS 7 6 6 LYS LYS A . n A 1 8 VAL 8 7 7 VAL VAL A . n A 1 9 GLU 9 8 8 GLU GLU A . n A 1 10 LYS 10 9 9 LYS LYS A . n A 1 11 ILE 11 10 10 ILE ILE A . n A 1 12 GLY 12 11 11 GLY GLY A . n A 1 13 GLU 13 12 12 GLU GLU A . n A 1 14 GLY 14 13 13 GLY GLY A . n A 1 15 THR 15 14 14 THR THR A . n A 1 16 TYR 16 15 15 TYR TYR A . n A 1 17 GLY 17 16 16 GLY GLY A . n A 1 18 VAL 18 17 17 VAL VAL A . n A 1 19 VAL 19 18 18 VAL VAL A . n A 1 20 TYR 20 19 19 TYR TYR A . n A 1 21 LYS 21 20 20 LYS LYS A . n A 1 22 ALA 22 21 21 ALA ALA A . n A 1 23 ARG 23 22 22 ARG ARG A . n A 1 24 ASN 24 23 23 ASN ASN A . n A 1 25 LYS 25 24 24 LYS LYS A . n A 1 26 LEU 26 25 25 LEU LEU A . n A 1 27 THR 27 26 26 THR THR A . n A 1 28 GLY 28 27 27 GLY GLY A . n A 1 29 GLU 29 28 28 GLU GLU A . n A 1 30 VAL 30 29 29 VAL VAL A . n A 1 31 VAL 31 30 30 VAL VAL A . n A 1 32 ALA 32 31 31 ALA ALA A . n A 1 33 LEU 33 32 32 LEU LEU A . n A 1 34 LYS 34 33 33 LYS LYS A . n A 1 35 LYS 35 34 34 LYS LYS A . n A 1 36 ILE 36 35 35 ILE ILE A . n A 1 37 ARG 37 36 ? ? ? A . n A 1 38 LEU 38 37 ? ? ? A . n A 1 39 ASP 39 38 ? ? ? A . n A 1 40 THR 40 39 ? ? ? A . n A 1 41 GLU 41 40 ? ? ? A . n A 1 42 THR 42 41 ? ? ? A . n A 1 43 GLU 43 42 ? ? ? A . n A 1 44 GLY 44 43 ? ? ? A . n A 1 45 VAL 45 44 44 VAL VAL A . n A 1 46 PRO 46 45 45 PRO PRO A . n A 1 47 SER 47 46 46 SER SER A . n A 1 48 THR 48 47 47 THR THR A . n A 1 49 ALA 49 48 48 ALA ALA A . n A 1 50 ILE 50 49 49 ILE ILE A . n A 1 51 ARG 51 50 50 ARG ARG A . n A 1 52 GLU 52 51 51 GLU GLU A . n A 1 53 ILE 53 52 52 ILE ILE A . n A 1 54 SER 54 53 53 SER SER A . n A 1 55 LEU 55 54 54 LEU LEU A . n A 1 56 LEU 56 55 55 LEU LEU A . n A 1 57 LYS 57 56 56 LYS LYS A . n A 1 58 GLU 58 57 57 GLU GLU A . n A 1 59 LEU 59 58 58 LEU LEU A . n A 1 60 ASN 60 59 59 ASN ASN A . n A 1 61 HIS 61 60 60 HIS HIS A . n A 1 62 PRO 62 61 61 PRO PRO A . n A 1 63 ASN 63 62 62 ASN ASN A . n A 1 64 ILE 64 63 63 ILE ILE A . n A 1 65 VAL 65 64 64 VAL VAL A . n A 1 66 LYS 66 65 65 LYS LYS A . n A 1 67 LEU 67 66 66 LEU LEU A . n A 1 68 LEU 68 67 67 LEU LEU A . n A 1 69 ASP 69 68 68 ASP ASP A . n A 1 70 VAL 70 69 69 VAL VAL A . n A 1 71 ILE 71 70 70 ILE ILE A . n A 1 72 HIS 72 71 71 HIS HIS A . n A 1 73 THR 73 72 72 THR THR A . n A 1 74 GLU 74 73 73 GLU GLU A . n A 1 75 ASN 75 74 74 ASN ASN A . n A 1 76 LYS 76 75 75 LYS LYS A . n A 1 77 LEU 77 76 76 LEU LEU A . n A 1 78 TYR 78 77 77 TYR TYR A . n A 1 79 LEU 79 78 78 LEU LEU A . n A 1 80 VAL 80 79 79 VAL VAL A . n A 1 81 PHE 81 80 80 PHE PHE A . n A 1 82 GLU 82 81 81 GLU GLU A . n A 1 83 PHE 83 82 82 PHE PHE A . n A 1 84 LEU 84 83 83 LEU LEU A . n A 1 85 HIS 85 84 84 HIS HIS A . n A 1 86 GLN 86 85 85 GLN GLN A . n A 1 87 ASP 87 86 86 ASP ASP A . n A 1 88 LEU 88 87 87 LEU LEU A . n A 1 89 LYS 89 88 88 LYS LYS A . n A 1 90 LYS 90 89 89 LYS LYS A . n A 1 91 PHE 91 90 90 PHE PHE A . n A 1 92 MET 92 91 91 MET MET A . n A 1 93 ASP 93 92 92 ASP ASP A . n A 1 94 ALA 94 93 93 ALA ALA A . n A 1 95 SER 95 94 94 SER SER A . n A 1 96 ALA 96 95 95 ALA ALA A . n A 1 97 LEU 97 96 96 LEU LEU A . n A 1 98 THR 98 97 97 THR THR A . n A 1 99 GLY 99 98 98 GLY GLY A . n A 1 100 ILE 100 99 99 ILE ILE A . n A 1 101 PRO 101 100 100 PRO PRO A . n A 1 102 LEU 102 101 101 LEU LEU A . n A 1 103 PRO 103 102 102 PRO PRO A . n A 1 104 LEU 104 103 103 LEU LEU A . n A 1 105 ILE 105 104 104 ILE ILE A . n A 1 106 LYS 106 105 105 LYS LYS A . n A 1 107 SER 107 106 106 SER SER A . n A 1 108 TYR 108 107 107 TYR TYR A . n A 1 109 LEU 109 108 108 LEU LEU A . n A 1 110 PHE 110 109 109 PHE PHE A . n A 1 111 GLN 111 110 110 GLN GLN A . n A 1 112 LEU 112 111 111 LEU LEU A . n A 1 113 LEU 113 112 112 LEU LEU A . n A 1 114 GLN 114 113 113 GLN GLN A . n A 1 115 GLY 115 114 114 GLY GLY A . n A 1 116 LEU 116 115 115 LEU LEU A . n A 1 117 ALA 117 116 116 ALA ALA A . n A 1 118 PHE 118 117 117 PHE PHE A . n A 1 119 CYS 119 118 118 CYS CYS A . n A 1 120 HIS 120 119 119 HIS HIS A . n A 1 121 SER 121 120 120 SER SER A . n A 1 122 HIS 122 121 121 HIS HIS A . n A 1 123 ARG 123 122 122 ARG ARG A . n A 1 124 VAL 124 123 123 VAL VAL A . n A 1 125 LEU 125 124 124 LEU LEU A . n A 1 126 HIS 126 125 125 HIS HIS A . n A 1 127 ARG 127 126 126 ARG ARG A . n A 1 128 ASP 128 127 127 ASP ASP A . n A 1 129 LEU 129 128 128 LEU LEU A . n A 1 130 LYS 130 129 129 LYS LYS A . n A 1 131 PRO 131 130 130 PRO PRO A . n A 1 132 GLN 132 131 131 GLN GLN A . n A 1 133 ASN 133 132 132 ASN ASN A . n A 1 134 LEU 134 133 133 LEU LEU A . n A 1 135 LEU 135 134 134 LEU LEU A . n A 1 136 ILE 136 135 135 ILE ILE A . n A 1 137 ASN 137 136 136 ASN ASN A . n A 1 138 THR 138 137 137 THR THR A . n A 1 139 GLU 139 138 138 GLU GLU A . n A 1 140 GLY 140 139 139 GLY GLY A . n A 1 141 ALA 141 140 140 ALA ALA A . n A 1 142 ILE 142 141 141 ILE ILE A . n A 1 143 LYS 143 142 142 LYS LYS A . n A 1 144 LEU 144 143 143 LEU LEU A . n A 1 145 ALA 145 144 144 ALA ALA A . n A 1 146 ASP 146 145 145 ASP ASP A . n A 1 147 PHE 147 146 146 PHE PHE A . n A 1 148 GLY 148 147 147 GLY GLY A . n A 1 149 LEU 149 148 148 LEU LEU A . n A 1 150 ALA 150 149 149 ALA ALA A . n A 1 151 ARG 151 150 150 ARG ARG A . n A 1 152 ALA 152 151 151 ALA ALA A . n A 1 153 PHE 153 152 152 PHE PHE A . n A 1 154 GLY 154 153 ? ? ? A . n A 1 155 VAL 155 154 ? ? ? A . n A 1 156 PRO 156 155 ? ? ? A . n A 1 157 VAL 157 156 ? ? ? A . n A 1 158 ARG 158 157 ? ? ? A . n A 1 159 THR 159 158 ? ? ? A . n A 1 160 TYR 160 159 ? ? ? A . n A 1 161 THR 161 160 ? ? ? A . n A 1 162 HIS 162 161 ? ? ? A . n A 1 163 GLU 163 162 ? ? ? A . n A 1 164 VAL 164 163 ? ? ? A . n A 1 165 VAL 165 164 ? ? ? A . n A 1 166 THR 166 165 165 THR THR A . n A 1 167 LEU 167 166 166 LEU LEU A . n A 1 168 TRP 168 167 167 TRP TRP A . n A 1 169 TYR 169 168 168 TYR TYR A . n A 1 170 ARG 170 169 169 ARG ARG A . n A 1 171 ALA 171 170 170 ALA ALA A . n A 1 172 PRO 172 171 171 PRO PRO A . n A 1 173 GLU 173 172 172 GLU GLU A . n A 1 174 ILE 174 173 173 ILE ILE A . n A 1 175 LEU 175 174 174 LEU LEU A . n A 1 176 LEU 176 175 175 LEU LEU A . n A 1 177 GLY 177 176 176 GLY GLY A . n A 1 178 CYS 178 177 177 CYS CYS A . n A 1 179 LYS 179 178 178 LYS LYS A . n A 1 180 TYR 180 179 179 TYR TYR A . n A 1 181 TYR 181 180 180 TYR TYR A . n A 1 182 SER 182 181 181 SER SER A . n A 1 183 THR 183 182 182 THR THR A . n A 1 184 ALA 184 183 183 ALA ALA A . n A 1 185 VAL 185 184 184 VAL VAL A . n A 1 186 ASP 186 185 185 ASP ASP A . n A 1 187 ILE 187 186 186 ILE ILE A . n A 1 188 TRP 188 187 187 TRP TRP A . n A 1 189 SER 189 188 188 SER SER A . n A 1 190 LEU 190 189 189 LEU LEU A . n A 1 191 GLY 191 190 190 GLY GLY A . n A 1 192 CYS 192 191 191 CYS CYS A . n A 1 193 ILE 193 192 192 ILE ILE A . n A 1 194 PHE 194 193 193 PHE PHE A . n A 1 195 ALA 195 194 194 ALA ALA A . n A 1 196 GLU 196 195 195 GLU GLU A . n A 1 197 MET 197 196 196 MET MET A . n A 1 198 VAL 198 197 197 VAL VAL A . n A 1 199 THR 199 198 198 THR THR A . n A 1 200 ARG 200 199 199 ARG ARG A . n A 1 201 ARG 201 200 200 ARG ARG A . n A 1 202 ALA 202 201 201 ALA ALA A . n A 1 203 LEU 203 202 202 LEU LEU A . n A 1 204 PHE 204 203 203 PHE PHE A . n A 1 205 PRO 205 204 204 PRO PRO A . n A 1 206 GLY 206 205 205 GLY GLY A . n A 1 207 ASP 207 206 206 ASP ASP A . n A 1 208 SER 208 207 207 SER SER A . n A 1 209 GLU 209 208 208 GLU GLU A . n A 1 210 ILE 210 209 209 ILE ILE A . n A 1 211 ASP 211 210 210 ASP ASP A . n A 1 212 GLN 212 211 211 GLN GLN A . n A 1 213 LEU 213 212 212 LEU LEU A . n A 1 214 PHE 214 213 213 PHE PHE A . n A 1 215 ARG 215 214 214 ARG ARG A . n A 1 216 ILE 216 215 215 ILE ILE A . n A 1 217 PHE 217 216 216 PHE PHE A . n A 1 218 ARG 218 217 217 ARG ARG A . n A 1 219 THR 219 218 218 THR THR A . n A 1 220 LEU 220 219 219 LEU LEU A . n A 1 221 GLY 221 220 220 GLY GLY A . n A 1 222 THR 222 221 221 THR THR A . n A 1 223 PRO 223 222 222 PRO PRO A . n A 1 224 ASP 224 223 223 ASP ASP A . n A 1 225 GLU 225 224 224 GLU GLU A . n A 1 226 VAL 226 225 225 VAL VAL A . n A 1 227 VAL 227 226 226 VAL VAL A . n A 1 228 TRP 228 227 227 TRP TRP A . n A 1 229 PRO 229 228 228 PRO PRO A . n A 1 230 GLY 230 229 229 GLY GLY A . n A 1 231 VAL 231 230 230 VAL VAL A . n A 1 232 THR 232 231 231 THR THR A . n A 1 233 SER 233 232 232 SER SER A . n A 1 234 MET 234 233 233 MET MET A . n A 1 235 PRO 235 234 234 PRO PRO A . n A 1 236 ASP 236 235 235 ASP ASP A . n A 1 237 TYR 237 236 236 TYR TYR A . n A 1 238 LYS 238 237 237 LYS LYS A . n A 1 239 PRO 239 238 238 PRO PRO A . n A 1 240 SER 240 239 239 SER SER A . n A 1 241 PHE 241 240 240 PHE PHE A . n A 1 242 PRO 242 241 241 PRO PRO A . n A 1 243 LYS 243 242 242 LYS LYS A . n A 1 244 TRP 244 243 243 TRP TRP A . n A 1 245 ALA 245 244 244 ALA ALA A . n A 1 246 ARG 246 245 245 ARG ARG A . n A 1 247 GLN 247 246 246 GLN GLN A . n A 1 248 ASP 248 247 247 ASP ASP A . n A 1 249 PHE 249 248 248 PHE PHE A . n A 1 250 SER 250 249 249 SER SER A . n A 1 251 LYS 251 250 250 LYS LYS A . n A 1 252 VAL 252 251 251 VAL VAL A . n A 1 253 VAL 253 252 252 VAL VAL A . n A 1 254 PRO 254 253 253 PRO PRO A . n A 1 255 PRO 255 254 254 PRO PRO A . n A 1 256 LEU 256 255 255 LEU LEU A . n A 1 257 ASP 257 256 256 ASP ASP A . n A 1 258 GLU 258 257 257 GLU GLU A . n A 1 259 ASP 259 258 258 ASP ASP A . n A 1 260 GLY 260 259 259 GLY GLY A . n A 1 261 ARG 261 260 260 ARG ARG A . n A 1 262 SER 262 261 261 SER SER A . n A 1 263 LEU 263 262 262 LEU LEU A . n A 1 264 LEU 264 263 263 LEU LEU A . n A 1 265 SER 265 264 264 SER SER A . n A 1 266 GLN 266 265 265 GLN GLN A . n A 1 267 MET 267 266 266 MET MET A . n A 1 268 LEU 268 267 267 LEU LEU A . n A 1 269 HIS 269 268 268 HIS HIS A . n A 1 270 TYR 270 269 269 TYR TYR A . n A 1 271 ASP 271 270 270 ASP ASP A . n A 1 272 PRO 272 271 271 PRO PRO A . n A 1 273 ASN 273 272 272 ASN ASN A . n A 1 274 LYS 274 273 273 LYS LYS A . n A 1 275 ARG 275 274 274 ARG ARG A . n A 1 276 ILE 276 275 275 ILE ILE A . n A 1 277 SER 277 276 276 SER SER A . n A 1 278 ALA 278 277 277 ALA ALA A . n A 1 279 LYS 279 278 278 LYS LYS A . n A 1 280 ALA 280 279 279 ALA ALA A . n A 1 281 ALA 281 280 280 ALA ALA A . n A 1 282 LEU 282 281 281 LEU LEU A . n A 1 283 ALA 283 282 282 ALA ALA A . n A 1 284 HIS 284 283 283 HIS HIS A . n A 1 285 PRO 285 284 284 PRO PRO A . n A 1 286 PHE 286 285 285 PHE PHE A . n A 1 287 PHE 287 286 286 PHE PHE A . n A 1 288 GLN 288 287 287 GLN GLN A . n A 1 289 ASP 289 288 288 ASP ASP A . n A 1 290 VAL 290 289 289 VAL VAL A . n A 1 291 THR 291 290 290 THR THR A . n A 1 292 LYS 292 291 291 LYS LYS A . n A 1 293 PRO 293 292 292 PRO PRO A . n A 1 294 VAL 294 293 293 VAL VAL A . n A 1 295 PRO 295 294 294 PRO PRO A . n A 1 296 HIS 296 295 295 HIS HIS A . n A 1 297 LEU 297 296 296 LEU LEU A . n A 1 298 ARG 298 297 297 ARG ARG A . n A 1 299 LEU 299 298 298 LEU LEU A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-09-08 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Version format compliance' # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 2 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 86 ? ? CG A ASP 86 ? ? OD2 A ASP 86 ? ? 124.53 118.30 6.23 0.90 N 2 1 CB A ASP 145 ? ? CA A ASP 145 ? ? C A ASP 145 ? ? 98.26 110.40 -12.14 2.00 N 3 1 CB A PHE 146 ? ? CG A PHE 146 ? ? CD2 A PHE 146 ? ? 116.10 120.80 -4.70 0.70 N 4 1 CB A TYR 168 ? ? CG A TYR 168 ? ? CD2 A TYR 168 ? ? 124.81 121.00 3.81 0.60 N 5 1 NH1 A ARG 199 ? ? CZ A ARG 199 ? ? NH2 A ARG 199 ? ? 127.87 119.40 8.47 1.10 N 6 1 NE A ARG 199 ? ? CZ A ARG 199 ? ? NH1 A ARG 199 ? ? 112.93 120.30 -7.37 0.50 N 7 1 CB A PHE 203 ? ? CG A PHE 203 ? ? CD1 A PHE 203 ? ? 125.58 120.80 4.78 0.70 N 8 1 CB A PHE 213 ? ? CG A PHE 213 ? ? CD2 A PHE 213 ? ? 125.55 120.80 4.75 0.70 N 9 1 NE A ARG 214 ? ? CZ A ARG 214 ? ? NH1 A ARG 214 ? ? 124.37 120.30 4.07 0.50 N 10 1 NE A ARG 214 ? ? CZ A ARG 214 ? ? NH2 A ARG 214 ? ? 117.12 120.30 -3.18 0.50 N 11 1 CA A MET 233 ? ? CB A MET 233 ? ? CG A MET 233 ? ? 102.47 113.30 -10.83 1.70 N 12 1 NE A ARG 245 ? ? CZ A ARG 245 ? ? NH2 A ARG 245 ? ? 117.15 120.30 -3.15 0.50 N 13 1 C A VAL 252 ? ? N A PRO 253 ? ? CA A PRO 253 ? ? 128.73 119.30 9.43 1.50 Y 14 1 CA A PRO 253 ? ? N A PRO 253 ? ? CD A PRO 253 ? ? 102.38 111.70 -9.32 1.40 N 15 1 N A LEU 298 ? ? CA A LEU 298 ? ? C A LEU 298 ? ? 133.84 111.00 22.84 2.70 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 73 ? ? 30.45 45.98 2 1 ASN A 74 ? ? 18.66 58.04 3 1 ARG A 126 ? ? 84.16 -21.53 4 1 ASP A 145 ? ? 82.32 -1.99 5 1 TYR A 179 ? ? -111.63 53.73 # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id VAL _pdbx_validate_main_chain_plane.auth_asym_id A _pdbx_validate_main_chain_plane.auth_seq_id 29 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle 11.12 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ARG 36 ? A ARG 37 2 1 Y 1 A LEU 37 ? A LEU 38 3 1 Y 1 A ASP 38 ? A ASP 39 4 1 Y 1 A THR 39 ? A THR 40 5 1 Y 1 A GLU 40 ? A GLU 41 6 1 Y 1 A THR 41 ? A THR 42 7 1 Y 1 A GLU 42 ? A GLU 43 8 1 Y 1 A GLY 43 ? A GLY 44 9 1 Y 1 A GLY 153 ? A GLY 154 10 1 Y 1 A VAL 154 ? A VAL 155 11 1 Y 1 A PRO 155 ? A PRO 156 12 1 Y 1 A VAL 156 ? A VAL 157 13 1 Y 1 A ARG 157 ? A ARG 158 14 1 Y 1 A THR 158 ? A THR 159 15 1 Y 1 A TYR 159 ? A TYR 160 16 1 Y 1 A THR 160 ? A THR 161 17 1 Y 1 A HIS 161 ? A HIS 162 18 1 Y 1 A GLU 162 ? A GLU 163 19 1 Y 1 A VAL 163 ? A VAL 164 20 1 Y 1 A VAL 164 ? A VAL 165 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'N-{1-[cis-3-(acetylamino)cyclobutyl]-1H-imidazol-4-yl}-2-(4-methoxyphenyl)acetamide' EFP 3 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EFP 1 999 999 EFP EFP A . C 3 HOH 1 300 300 HOH HOH A . C 3 HOH 2 301 301 HOH HOH A . C 3 HOH 3 302 302 HOH HOH A . C 3 HOH 4 303 303 HOH HOH A . C 3 HOH 5 304 304 HOH HOH A . C 3 HOH 6 305 305 HOH HOH A . C 3 HOH 7 306 306 HOH HOH A . C 3 HOH 8 307 307 HOH HOH A . C 3 HOH 9 308 308 HOH HOH A . C 3 HOH 10 309 309 HOH HOH A . C 3 HOH 11 310 310 HOH HOH A . C 3 HOH 12 311 311 HOH HOH A . C 3 HOH 13 312 312 HOH HOH A . C 3 HOH 14 313 313 HOH HOH A . C 3 HOH 15 314 314 HOH HOH A . C 3 HOH 16 315 315 HOH HOH A . C 3 HOH 17 316 316 HOH HOH A . C 3 HOH 18 317 317 HOH HOH A . C 3 HOH 19 318 318 HOH HOH A . C 3 HOH 20 319 319 HOH HOH A . C 3 HOH 21 320 320 HOH HOH A . C 3 HOH 22 321 321 HOH HOH A . C 3 HOH 23 322 322 HOH HOH A . C 3 HOH 24 323 323 HOH HOH A . C 3 HOH 25 324 324 HOH HOH A . C 3 HOH 26 325 325 HOH HOH A . C 3 HOH 27 326 326 HOH HOH A . C 3 HOH 28 327 327 HOH HOH A . C 3 HOH 29 328 328 HOH HOH A . C 3 HOH 30 329 329 HOH HOH A . C 3 HOH 31 330 330 HOH HOH A . C 3 HOH 32 331 331 HOH HOH A . C 3 HOH 33 332 332 HOH HOH A . C 3 HOH 34 333 333 HOH HOH A . C 3 HOH 35 334 334 HOH HOH A . C 3 HOH 36 335 335 HOH HOH A . C 3 HOH 37 336 336 HOH HOH A . C 3 HOH 38 337 337 HOH HOH A . C 3 HOH 39 338 338 HOH HOH A . C 3 HOH 40 339 339 HOH HOH A . C 3 HOH 41 340 340 HOH HOH A . C 3 HOH 42 341 341 HOH HOH A . C 3 HOH 43 342 342 HOH HOH A . C 3 HOH 44 343 343 HOH HOH A . C 3 HOH 45 344 344 HOH HOH A . C 3 HOH 46 345 345 HOH HOH A . C 3 HOH 47 346 346 HOH HOH A . C 3 HOH 48 347 347 HOH HOH A . C 3 HOH 49 348 348 HOH HOH A . C 3 HOH 50 349 349 HOH HOH A . C 3 HOH 51 350 350 HOH HOH A . C 3 HOH 52 351 351 HOH HOH A . C 3 HOH 53 352 352 HOH HOH A . C 3 HOH 54 353 353 HOH HOH A . C 3 HOH 55 354 354 HOH HOH A . C 3 HOH 56 355 355 HOH HOH A . C 3 HOH 57 356 356 HOH HOH A . C 3 HOH 58 357 357 HOH HOH A . C 3 HOH 59 358 358 HOH HOH A . C 3 HOH 60 359 359 HOH HOH A . C 3 HOH 61 360 360 HOH HOH A . C 3 HOH 62 361 361 HOH HOH A . C 3 HOH 63 362 362 HOH HOH A . C 3 HOH 64 363 363 HOH HOH A . C 3 HOH 65 364 364 HOH HOH A . C 3 HOH 66 365 365 HOH HOH A . #