HEADER HYDROLASE 27-JUL-09 3IGH TITLE CRYSTAL STRUCTURE OF AN UNCHARACTERIZED METAL-DEPENDENT HYDROLASE FROM TITLE 2 PYROCOCCUS HORIKOSHII OT3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED METAL-DEPENDENT HYDROLASE; COMPND 3 CHAIN: X; COMPND 4 FRAGMENT: RESIDUES 20-494; COMPND 5 SYNONYM: UNCHARACTERIZED PROTEIN PH1139; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS HORIKOSHII; SOURCE 3 ORGANISM_TAXID: 53953; SOURCE 4 GENE: COG1574; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: MODIFIED PET26 KEYWDS STRUCTURAL GENOMICS, AMIDOHYDROLASE, PSI-2, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, HYDROLASE, NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL KEYWDS 3 GENOMICS, NYSGXRC EXPDTA X-RAY DIFFRACTION AUTHOR Y.PATSKOVSKY,R.TORO,J.FREEMAN,S.MILLER,J.M.SAUDER,F.M.RAUSHEL, AUTHOR 2 S.K.BURLEY,S.C.ALMO,NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL AUTHOR 3 GENOMICS (NYSGXRC) REVDAT 4 21-FEB-24 3IGH 1 REMARK REVDAT 3 10-FEB-21 3IGH 1 AUTHOR JRNL REMARK SEQADV REVDAT 2 21-NOV-18 3IGH 1 AUTHOR REVDAT 1 04-AUG-09 3IGH 0 JRNL AUTH Y.PATSKOVSKY,R.TORO,J.FREEMAN,S.MILLER,J.M.SAUDER, JRNL AUTH 2 F.M.RAUSHEL,S.K.BURLEY,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF AN UNCHARACTERIZED METAL-DEPENDENT JRNL TITL 2 HYDROLASE FROM PYROCOCCUS HORIKOSHII JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.3.0034 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 54563 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1742 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3872 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.84 REMARK 3 BIN R VALUE (WORKING SET) : 0.2490 REMARK 3 BIN FREE R VALUE SET COUNT : 133 REMARK 3 BIN FREE R VALUE : 0.2810 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3837 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 95 REMARK 3 SOLVENT ATOMS : 369 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.63 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.45000 REMARK 3 B22 (A**2) : -0.45000 REMARK 3 B33 (A**2) : 0.89000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.122 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.120 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.084 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.910 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.954 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4173 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5682 ; 1.159 ; 1.997 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 533 ; 5.212 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 187 ;33.290 ;23.743 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 784 ;14.389 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 31 ;15.021 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 627 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3063 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1922 ; 0.155 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2791 ; 0.299 ; 0.500 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 632 ; 0.157 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 56 ; 0.138 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 37 ; 0.163 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2554 ; 3.972 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4030 ; 5.008 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1806 ; 8.087 ; 4.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1624 ;11.259 ; 6.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3IGH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-JUL-09. REMARK 100 THE DEPOSITION ID IS D_1000054380. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUN-09 REMARK 200 TEMPERATURE (KELVIN) : 90 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9789 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56472 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -5.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 10.20 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08400 REMARK 200 FOR THE DATA SET : 6.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.40 REMARK 200 R MERGE FOR SHELL (I) : 0.86000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2M AMMONIUM SULFATE, PH 7.5, 10% REMARK 280 GLYCEROL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.58700 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 53.28550 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 53.28550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 99.88050 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 53.28550 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 53.28550 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 33.29350 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 53.28550 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 53.28550 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 99.88050 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 53.28550 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 53.28550 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 33.29350 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 66.58700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -480.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: X REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 133.17400 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET X 17 REMARK 465 HIS X 501 REMARK 465 HIS X 502 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS X 83 100.44 -167.10 REMARK 500 ASP X 142 34.34 -83.04 REMARK 500 LYS X 150 131.17 -36.96 REMARK 500 CYS X 151 -5.04 81.28 REMARK 500 GLU X 182 -120.57 50.79 REMARK 500 ASP X 299 87.50 -154.13 REMARK 500 HIS X 355 -67.72 83.08 REMARK 500 LYS X 438 -41.54 -132.99 REMARK 500 THR X 460 -85.68 -125.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 X 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 X 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 X 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 X 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 X 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 X 6 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 X 7 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 X 8 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 X 9 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 X 10 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 X 11 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 X 12 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 X 13 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 X 14 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 X 15 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 X 16 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 X 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 X 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 X 505 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-9564A RELATED DB: TARGETDB DBREF 3IGH X 20 494 UNP O58866 O58866_PYRHO 20 494 SEQADV 3IGH MET X 17 UNP O58866 EXPRESSION TAG SEQADV 3IGH SER X 18 UNP O58866 EXPRESSION TAG SEQADV 3IGH LEU X 19 UNP O58866 EXPRESSION TAG SEQADV 3IGH GLU X 495 UNP O58866 EXPRESSION TAG SEQADV 3IGH GLY X 496 UNP O58866 EXPRESSION TAG SEQADV 3IGH HIS X 497 UNP O58866 EXPRESSION TAG SEQADV 3IGH HIS X 498 UNP O58866 EXPRESSION TAG SEQADV 3IGH HIS X 499 UNP O58866 EXPRESSION TAG SEQADV 3IGH HIS X 500 UNP O58866 EXPRESSION TAG SEQADV 3IGH HIS X 501 UNP O58866 EXPRESSION TAG SEQADV 3IGH HIS X 502 UNP O58866 EXPRESSION TAG SEQRES 1 X 486 MET SER LEU LYS ALA LEU ILE ASN GLY THR ILE TYR THR SEQRES 2 X 486 SER PHE ASN PRO LEU LYS LYS VAL SER GLY LEU VAL ILE SEQRES 3 X 486 SER HIS GLY LYS VAL ILE TYR ALA GLY ASP SER GLU VAL SEQRES 4 X 486 ALA LYS LYS ILE VAL GLU LEU SER GLY GLY GLU ILE VAL SEQRES 5 X 486 ASP LEU LYS GLY LYS TYR VAL MET PRO ALA PHE PHE ASP SEQRES 6 X 486 SER HIS LEU HIS LEU ASP GLU LEU GLY MET SER LEU GLU SEQRES 7 X 486 MET VAL ASP LEU ARG GLY ALA LYS SER ILE GLU GLU LEU SEQRES 8 X 486 ILE GLN ARG LEU LYS ARG GLY LYS GLY ARG ILE ILE PHE SEQRES 9 X 486 GLY PHE GLY TRP ASP GLN ASP GLU LEU GLY GLU TRP PRO SEQRES 10 X 486 THR ARG LYS GLU LEU ASN ALA ILE ASP LYS PRO VAL PHE SEQRES 11 X 486 ILE TYR ARG LYS CYS PHE HIS VAL ALA VAL ALA ASN ASP SEQRES 12 X 486 LYS MET LEU GLU LEU LEU ASN LEU THR PRO SER LYS ASP SEQRES 13 X 486 PHE ASP GLU ASP THR GLY ILE ILE LYS GLU LYS SER LEU SEQRES 14 X 486 GLU GLU ALA ARG LYS VAL ILE ASN GLU ARG VAL LEU THR SEQRES 15 X 486 VAL GLU ASP TYR VAL TYR TYR ILE LYS ARG ALA GLN GLU SEQRES 16 X 486 HIS LEU LEU ASP LEU GLY VAL LYS SER VAL SER PHE MET SEQRES 17 X 486 SER VAL ASN GLU LYS ALA LEU ARG ALA LEU PHE TYR LEU SEQRES 18 X 486 GLU ARG GLU GLY LYS LEU SER ILE ASN VAL PHE ALA TYR SEQRES 19 X 486 VAL THR PRO GLU VAL LEU ASP LYS LEU GLU SER ILE GLY SEQRES 20 X 486 LEU GLY ARG PHE GLN GLY ASN ARG LEU THR ILE ALA GLY SEQRES 21 X 486 VAL LYS LEU PHE THR ASP GLY SER LEU GLY ALA ARG THR SEQRES 22 X 486 ALA LEU LEU SER LYS PRO TYR SER ASP ASP PRO SER THR SEQRES 23 X 486 SER GLY GLN LEU VAL MET GLU ARG GLU GLU LEU ILE ARG SEQRES 24 X 486 ILE THR GLU LYS ALA ARG SER LEU GLY LEU ASP VAL ALA SEQRES 25 X 486 ILE HIS ALA ILE GLY ASP LYS ALA LEU ASP VAL ALA LEU SEQRES 26 X 486 ASP VAL PHE GLU THR THR GLY PHE PRO GLY ARG ILE GLU SEQRES 27 X 486 HIS ALA SER LEU VAL ARG ASP ASP GLN LEU GLU ARG VAL SEQRES 28 X 486 LYS ASN LEU LYS VAL ARG LEU SER VAL GLN PRO HIS PHE SEQRES 29 X 486 ILE ILE SER ASP TRP TRP ILE VAL GLU ARG VAL GLY GLU SEQRES 30 X 486 GLU ARG VAL LYS TRP VAL TYR ARG PHE LYS ASP LEU MET SEQRES 31 X 486 LYS VAL ALA GLU LEU GLY PHE SER THR ASP SER PRO ILE SEQRES 32 X 486 GLU PRO ALA ASP PRO TRP LEU THR VAL ASP ALA ALA VAL SEQRES 33 X 486 ASN ARG GLY LYS GLY LYS VAL LYS LEU TYR GLU LEU THR SEQRES 34 X 486 LYS ASP GLN ALA LEU ASP ILE LYS ASP ALA LEU HIS SER SEQRES 35 X 486 TYR THR TYR GLY SER ALA ARG VAL SER LEU ALA SER ASP SEQRES 36 X 486 ILE GLY LYS LEU GLU PRO GLY PHE LYS ALA GLU TYR ILE SEQRES 37 X 486 ILE LEU ASP ARG ASP PRO LEU VAL VAL LYS GLU GLY HIS SEQRES 38 X 486 HIS HIS HIS HIS HIS HET SO4 X 1 5 HET SO4 X 2 5 HET SO4 X 3 5 HET SO4 X 4 5 HET SO4 X 5 5 HET SO4 X 6 5 HET SO4 X 7 5 HET SO4 X 8 5 HET SO4 X 9 10 HET SO4 X 10 5 HET SO4 X 11 5 HET SO4 X 12 5 HET SO4 X 13 5 HET SO4 X 14 5 HET SO4 X 15 5 HET SO4 X 16 5 HET SO4 X 503 5 HET SO4 X 504 5 HET SO4 X 505 5 HETNAM SO4 SULFATE ION FORMUL 2 SO4 19(O4 S 2-) FORMUL 21 HOH *369(H2 O) HELIX 1 1 ASP X 52 GLY X 64 1 13 HELIX 2 2 HIS X 85 MET X 95 1 11 HELIX 3 3 SER X 103 ARG X 113 1 11 HELIX 4 4 ASP X 125 GLY X 130 1 6 HELIX 5 5 THR X 134 ASN X 139 1 6 HELIX 6 6 ASN X 158 ASN X 166 1 9 HELIX 7 7 GLU X 182 ARG X 195 1 14 HELIX 8 8 THR X 198 LEU X 216 1 19 HELIX 9 9 ASN X 227 GLU X 240 1 14 HELIX 10 10 THR X 252 ILE X 262 1 11 HELIX 11 11 GLU X 309 SER X 322 1 14 HELIX 12 12 GLY X 333 GLY X 348 1 16 HELIX 13 13 ARG X 360 LYS X 371 1 12 HELIX 14 14 HIS X 379 ASP X 384 1 6 HELIX 15 15 TRP X 386 GLY X 392 1 7 HELIX 16 16 GLU X 393 VAL X 399 5 7 HELIX 17 17 ARG X 401 ALA X 409 1 9 HELIX 18 18 ASP X 423 ARG X 434 1 12 HELIX 19 19 LYS X 440 LYS X 446 1 7 HELIX 20 20 ASP X 447 ALA X 449 5 3 HELIX 21 21 ASP X 451 TYR X 459 1 9 HELIX 22 22 THR X 460 SER X 467 1 8 HELIX 23 23 LYS X 494 HIS X 498 5 5 SHEET 1 A 4 LYS X 46 GLY X 51 0 SHEET 2 A 4 GLY X 39 SER X 43 -1 N VAL X 41 O ILE X 48 SHEET 3 A 4 LEU X 19 ILE X 23 -1 N LYS X 20 O ILE X 42 SHEET 4 A 4 GLU X 66 ASP X 69 1 O VAL X 68 N ALA X 21 SHEET 1 B 4 LYS X 35 VAL X 37 0 SHEET 2 B 4 THR X 26 SER X 30 -1 N ILE X 27 O VAL X 37 SHEET 3 B 4 TYR X 74 PRO X 77 1 O VAL X 75 N TYR X 28 SHEET 4 B 4 TYR X 483 LEU X 486 -1 O LEU X 486 N TYR X 74 SHEET 1 C 5 PHE X 79 LEU X 84 0 SHEET 2 C 5 VAL X 218 VAL X 226 1 O MET X 224 N LEU X 84 SHEET 3 C 5 ASN X 246 VAL X 251 1 O TYR X 250 N PHE X 223 SHEET 4 C 5 LEU X 272 PHE X 280 1 O THR X 273 N ALA X 249 SHEET 5 C 5 PHE X 267 GLN X 268 -1 N PHE X 267 O ILE X 274 SHEET 1 D 8 PHE X 79 LEU X 84 0 SHEET 2 D 8 VAL X 218 VAL X 226 1 O MET X 224 N LEU X 84 SHEET 3 D 8 ASN X 246 VAL X 251 1 O TYR X 250 N PHE X 223 SHEET 4 D 8 LEU X 272 PHE X 280 1 O THR X 273 N ALA X 249 SHEET 5 D 8 ASP X 326 ALA X 331 1 O ALA X 328 N LEU X 279 SHEET 6 D 8 ARG X 352 HIS X 355 1 O GLU X 354 N ILE X 329 SHEET 7 D 8 ARG X 373 VAL X 376 1 O ARG X 373 N ILE X 353 SHEET 8 D 8 LEU X 411 PHE X 413 1 O GLY X 412 N LEU X 374 SHEET 1 E 6 VAL X 96 ASP X 97 0 SHEET 2 E 6 ILE X 119 TRP X 124 1 O PHE X 120 N VAL X 96 SHEET 3 E 6 VAL X 145 ARG X 149 1 O TYR X 148 N GLY X 121 SHEET 4 E 6 VAL X 154 ALA X 157 -1 O VAL X 154 N ARG X 149 SHEET 5 E 6 ILE X 179 LYS X 181 -1 O ILE X 180 N ALA X 155 SHEET 6 E 6 PHE X 173 ASP X 174 -1 N ASP X 174 O ILE X 179 CISPEP 1 ASN X 32 PRO X 33 0 0.13 CISPEP 2 SER X 417 PRO X 418 0 9.14 SITE 1 AC1 8 HIS X 83 HIS X 85 LYS X 278 PHE X 280 SITE 2 AC1 8 HIS X 330 HIS X 355 ASP X 416 HOH X 606 SITE 1 AC2 5 ARG X 321 HOH X 568 HOH X 779 HOH X 780 SITE 2 AC2 5 HOH X 816 SITE 1 AC3 8 LEU X 486 ASP X 487 ARG X 488 HIS X 498 SITE 2 AC3 8 HIS X 499 HOH X 591 HOH X 791 HOH X 806 SITE 1 AC4 6 ARG X 315 HIS X 379 LEU X 426 LYS X 438 SITE 2 AC4 6 HOH X 556 HOH X 761 SITE 1 AC5 4 THR X 198 VAL X 199 GLU X 200 LYS X 229 SITE 1 AC6 4 ASP X 361 ASP X 362 LYS X 397 TRP X 398 SITE 1 AC7 6 ASN X 193 GLU X 194 ASN X 227 HOH X 588 SITE 2 AC7 6 HOH X 775 HOH X 848 SITE 1 AC8 6 GLN X 126 TRP X 132 LYS X 335 HOH X 679 SITE 2 AC8 6 HOH X 749 HOH X 832 SITE 1 AC9 9 HIS X 212 PRO X 421 ALA X 422 ASP X 423 SITE 2 AC9 9 HOH X 530 HOH X 674 HOH X 719 HOH X 773 SITE 3 AC9 9 HOH X 793 SITE 1 BC1 5 LEU X 243 ASN X 270 ARG X 271 HOH X 774 SITE 2 BC1 5 HOH X 834 SITE 1 BC2 6 GLY X 392 GLU X 393 GLU X 394 HOH X 583 SITE 2 BC2 6 HOH X 721 HOH X 830 SITE 1 BC3 3 LYS X 115 GLY X 116 LYS X 143 SITE 1 BC4 3 PRO X 33 LEU X 34 LYS X 453 SITE 1 BC5 5 LYS X 219 ARG X 271 GLU X 482 HOH X 654 SITE 2 BC5 5 HOH X 716 SITE 1 BC6 4 GLN X 109 SER X 170 LYS X 171 LYS X 183 SITE 1 BC7 9 LYS X 150 GLU X 309 ARG X 310 GLU X 311 SITE 2 BC7 9 TRP X 385 HOH X 537 HOH X 689 HOH X 710 SITE 3 BC7 9 HOH X 835 SITE 1 BC8 5 ARG X 315 LYS X 319 LYS X 438 HOH X 600 SITE 2 BC8 5 HOH X 805 SITE 1 BC9 3 ARG X 321 HOH X 625 HOH X 656 SITE 1 CC1 3 ARG X 488 HIS X 497 HIS X 499 CRYST1 106.571 106.571 133.174 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009383 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009383 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007509 0.00000