HEADER FLAVOPROTEIN, OXIDOREDUCTASE 30-JUL-09 3IHG TITLE CRYSTAL STRUCTURE OF A TERNARY COMPLEX OF AKLAVINONE-11 HYDROXYLASE TITLE 2 WITH FAD AND AKLAVINONE COMPND MOL_ID: 1; COMPND 2 MOLECULE: RDME; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES PURPURASCENS; SOURCE 3 ORGANISM_TAXID: 1924; SOURCE 4 GENE: RDME; SOURCE 5 EXPRESSION_SYSTEM: STREPTOMYCES LIVIDANS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 1916; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: TK24; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PJN018 KEYWDS FLAVOENZYME, ANTHRACYCLINE, POLYKETIDE BIOSYNTHESIS, MEROHEDRAL KEYWDS 2 TWINNING, ENZYME MECHANISM, HYDROXYLASE, FLAVOPROTEIN, KEYWDS 3 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.LINDQVIST,H.KOSKINIEMI,A.JANSSON,T.SANDALOVA,G.SCHNEIDER REVDAT 4 21-FEB-24 3IHG 1 REMARK REVDAT 3 07-MAR-18 3IHG 1 REMARK REVDAT 2 10-NOV-09 3IHG 1 JRNL REVDAT 1 29-SEP-09 3IHG 0 JRNL AUTH Y.LINDQVIST,H.KOSKINIEMI,A.JANSSON,T.SANDALOVA,R.SCHNELL, JRNL AUTH 2 Z.LIU,P.MANTSALA,J.NIEMI,G.SCHNEIDER JRNL TITL STRUCTURAL BASIS FOR SUBSTRATE RECOGNITION AND SPECIFICITY JRNL TITL 2 IN AKLAVINONE-11-HYDROXYLASE FROM RHODOMYCIN BIOSYNTHESIS. JRNL REF J.MOL.BIOL. V. 393 966 2009 JRNL REFN ISSN 0022-2836 JRNL PMID 19744497 JRNL DOI 10.1016/J.JMB.2009.09.003 REMARK 2 REMARK 2 RESOLUTION. 2.49 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0072 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.49 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.68 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 61191 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3278 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.49 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.56 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3046 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 66.07 REMARK 3 BIN R VALUE (WORKING SET) : 0.2470 REMARK 3 BIN FREE R VALUE SET COUNT : 181 REMARK 3 BIN FREE R VALUE : 0.3370 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 12144 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 339 REMARK 3 SOLVENT ATOMS : 199 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 38.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -11.23000 REMARK 3 B22 (A**2) : -11.23000 REMARK 3 B33 (A**2) : 22.45000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.123 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.063 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.262 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.404 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.919 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.876 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 12798 ; 0.019 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 17468 ; 1.877 ; 1.997 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1616 ; 6.267 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 577 ;34.445 ;22.652 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1919 ;19.019 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 140 ;23.328 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1885 ; 0.123 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 9926 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 7947 ; 0.685 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 12647 ; 1.231 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4851 ; 1.927 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 4815 ; 3.011 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 0 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 4112 ; 0.12 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 B (A): 4112 ; 0.09 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 C (A): 4112 ; 0.09 ; 0.05 REMARK 3 TIGHT THERMAL 1 A (A**2): 4112 ; 0.19 ; 0.50 REMARK 3 TIGHT THERMAL 1 B (A**2): 4112 ; 0.15 ; 0.50 REMARK 3 TIGHT THERMAL 1 C (A**2): 4112 ; 0.17 ; 0.50 REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 2 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.489 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : -H-K, K, -L REMARK 3 TWIN FRACTION : 0.511 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. REMARK 3 REFINEMENT WAS DONE USING MEROHEDRAL TWINNING. REMARK 4 REMARK 4 3IHG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-JUL-09. REMARK 100 THE DEPOSITION ID IS D_1000054415. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-FEB-00 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MAX II REMARK 200 BEAMLINE : I711 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0159 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 65078 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.490 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08200 REMARK 200 FOR THE DATA SET : 16.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.49 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.62 REMARK 200 COMPLETENESS FOR SHELL (%) : 81.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.23500 REMARK 200 FOR SHELL : 4.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.79 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20MM TRIS, 2.1M AMMONIUM SULFATE, PH REMARK 280 7.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 49.81950 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 49.81950 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 49.81950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG B 131 O HOH B 589 1.80 REMARK 500 NH2 ARG C 398 O ASP C 408 1.83 REMARK 500 NH2 ARG B 398 O ASP B 408 1.97 REMARK 500 NH2 ARG A 398 O ASP A 408 2.01 REMARK 500 NE ARG A 138 O4 SO4 A 544 2.09 REMARK 500 O GLU A 90 O HOH A 565 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLN B 263 CB HIS C 377 4665 1.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 37 CZ ARG A 37 NH1 -0.079 REMARK 500 ARG A 58 CZ ARG A 58 NH1 -0.099 REMARK 500 ARG A 193 CZ ARG A 193 NH1 -0.085 REMARK 500 ARG A 193 CZ ARG A 193 NH2 -0.093 REMARK 500 GLU B 380 CG GLU B 380 CD -0.096 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 37 NH1 - CZ - NH2 ANGL. DEV. = -6.8 DEGREES REMARK 500 ARG A 37 NE - CZ - NH2 ANGL. DEV. = 6.5 DEGREES REMARK 500 ARG A 45 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG A 58 NH1 - CZ - NH2 ANGL. DEV. = -9.3 DEGREES REMARK 500 ARG A 58 NE - CZ - NH2 ANGL. DEV. = 7.5 DEGREES REMARK 500 ASP A 152 CB - CG - OD1 ANGL. DEV. = -6.4 DEGREES REMARK 500 ASP A 152 CB - CG - OD2 ANGL. DEV. = 10.9 DEGREES REMARK 500 ARG A 160 NE - CZ - NH1 ANGL. DEV. = -6.1 DEGREES REMARK 500 ARG A 160 NE - CZ - NH2 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG A 193 NH1 - CZ - NH2 ANGL. DEV. = -7.8 DEGREES REMARK 500 ARG A 193 NE - CZ - NH1 ANGL. DEV. = 4.6 DEGREES REMARK 500 ARG A 193 NE - CZ - NH2 ANGL. DEV. = 3.1 DEGREES REMARK 500 ASP A 259 CB - CG - OD1 ANGL. DEV. = -6.2 DEGREES REMARK 500 ASP A 259 CB - CG - OD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 ARG A 421 NE - CZ - NH1 ANGL. DEV. = 5.1 DEGREES REMARK 500 ARG A 421 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG A 425 NE - CZ - NH1 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG A 493 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ASP A 507 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 MET B 1 CB - CG - SD ANGL. DEV. = -22.9 DEGREES REMARK 500 ARG B 30 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG B 160 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 ARG B 160 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG B 421 NH1 - CZ - NH2 ANGL. DEV. = -7.3 DEGREES REMARK 500 ARG B 421 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG B 421 NE - CZ - NH2 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG B 425 NE - CZ - NH1 ANGL. DEV. = -3.2 DEGREES REMARK 500 ASP B 458 CB - CG - OD1 ANGL. DEV. = 6.3 DEGREES REMARK 500 ARG C 58 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 ARG C 160 NE - CZ - NH1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG C 160 NE - CZ - NH2 ANGL. DEV. = -5.7 DEGREES REMARK 500 ASP C 259 CB - CG - OD1 ANGL. DEV. = -13.0 DEGREES REMARK 500 ASP C 259 CB - CG - OD2 ANGL. DEV. = 14.2 DEGREES REMARK 500 ARG C 421 NE - CZ - NH2 ANGL. DEV. = 4.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 4 152.97 -47.43 REMARK 500 ARG A 45 -123.84 48.66 REMARK 500 LEU A 199 -61.14 -103.14 REMARK 500 ALA A 209 137.53 -172.95 REMARK 500 THR A 237 -168.28 -127.43 REMARK 500 SER A 399 -175.14 -173.04 REMARK 500 THR A 440 -28.27 -39.47 REMARK 500 ASP A 446 -75.47 -65.65 REMARK 500 GLU A 454 -47.36 -28.19 REMARK 500 ALA A 481 -107.47 -108.70 REMARK 500 ARG B 45 -122.61 42.95 REMARK 500 ASP B 71 -169.06 -105.44 REMARK 500 THR B 110 144.06 -170.54 REMARK 500 ASP B 179 30.28 -94.43 REMARK 500 ALA B 209 138.02 -175.79 REMARK 500 ARG B 299 128.98 -174.94 REMARK 500 SER B 399 -176.93 178.92 REMARK 500 ASP B 446 -74.73 -62.37 REMARK 500 ALA B 481 -106.39 -118.80 REMARK 500 ARG B 505 -177.18 -67.70 REMARK 500 ARG C 45 -128.00 43.54 REMARK 500 ARG C 182 59.20 -90.09 REMARK 500 ALA C 209 136.74 -178.27 REMARK 500 MET C 374 -30.07 -135.58 REMARK 500 SER C 399 -173.79 -174.60 REMARK 500 ASP C 446 -71.22 -65.88 REMARK 500 ALA C 481 -103.14 -110.09 REMARK 500 ARG C 505 175.36 -59.46 REMARK 500 TRP C 512 144.95 -173.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 536 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE VAK A 537 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 538 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 539 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 540 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 541 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 542 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 543 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 544 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 545 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 546 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD B 536 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE VAK B 537 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 538 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 539 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 541 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 542 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD C 536 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE VAK C 537 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 538 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 539 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 540 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 541 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 542 DBREF 3IHG A 1 535 UNP Q54530 Q54530_9ACTO 1 535 DBREF 3IHG B 1 535 UNP Q54530 Q54530_9ACTO 1 535 DBREF 3IHG C 1 535 UNP Q54530 Q54530_9ACTO 1 535 SEQRES 1 A 535 MET ASN ASP HIS GLU VAL ASP VAL LEU VAL VAL GLY ALA SEQRES 2 A 535 GLY LEU GLY GLY LEU SER THR ALA MET PHE LEU ALA ARG SEQRES 3 A 535 GLN GLY VAL ARG VAL LEU VAL VAL GLU ARG ARG PRO GLY SEQRES 4 A 535 LEU SER PRO TYR PRO ARG ALA ALA GLY GLN ASN PRO ARG SEQRES 5 A 535 THR MET GLU LEU LEU ARG ILE GLY GLY VAL ALA ASP GLU SEQRES 6 A 535 VAL VAL ARG ALA ASP ASP ILE ARG GLY THR GLN GLY ASP SEQRES 7 A 535 PHE VAL ILE ARG LEU ALA GLU SER VAL ARG GLY GLU ILE SEQRES 8 A 535 LEU ARG THR VAL SER GLU SER PHE ASP ASP MET VAL ALA SEQRES 9 A 535 ALA THR GLU PRO CYS THR PRO ALA GLY TRP ALA MET LEU SEQRES 10 A 535 SER GLN ASP LYS LEU GLU PRO ILE LEU LEU ALA GLN ALA SEQRES 11 A 535 ARG LYS HIS GLY GLY ALA ILE ARG PHE GLY THR ARG LEU SEQRES 12 A 535 LEU SER PHE ARG GLN HIS ASP ASP ASP ALA GLY ALA GLY SEQRES 13 A 535 VAL THR ALA ARG LEU ALA GLY PRO ASP GLY GLU TYR ASP SEQRES 14 A 535 LEU ARG ALA GLY TYR LEU VAL GLY ALA ASP GLY ASN ARG SEQRES 15 A 535 SER LEU VAL ARG GLU SER LEU GLY ILE GLY ARG TYR GLY SEQRES 16 A 535 HIS GLY THR LEU THR HIS MET VAL GLY VAL ILE PHE ASP SEQRES 17 A 535 ALA ASP LEU SER GLY ILE MET GLU PRO GLY THR THR GLY SEQRES 18 A 535 TRP TYR TYR LEU HIS HIS PRO GLU PHE LYS GLY THR PHE SEQRES 19 A 535 GLY PRO THR ASP ARG PRO ASP ARG HIS THR LEU PHE VAL SEQRES 20 A 535 GLU TYR ASP PRO ASP GLU GLY GLU ARG PRO GLU ASP PHE SEQRES 21 A 535 THR PRO GLN ARG CYS VAL GLU LEU ILE GLY LEU ALA LEU SEQRES 22 A 535 ASP ALA PRO GLU VAL LYS PRO GLU LEU VAL ASP ILE GLN SEQRES 23 A 535 GLY TRP GLU MET ALA ALA ARG ILE ALA GLU ARG TRP ARG SEQRES 24 A 535 GLU GLY ARG VAL PHE LEU ALA GLY ASP ALA ALA LYS VAL SEQRES 25 A 535 THR PRO PRO THR GLY GLY MET SER GLY ASN ALA ALA VAL SEQRES 26 A 535 ALA ASP GLY PHE ASP LEU ALA TRP LYS LEU ALA ALA VAL SEQRES 27 A 535 LEU GLN GLY GLN ALA GLY ALA GLY LEU LEU ASP THR TYR SEQRES 28 A 535 GLU ASP GLU ARG LYS VAL ALA ALA GLU LEU VAL VAL ALA SEQRES 29 A 535 GLU ALA LEU ALA ILE TYR ALA GLN ARG MET ALA PRO HIS SEQRES 30 A 535 MET ALA GLU VAL TRP ASP LYS SER VAL GLY TYR PRO GLU SEQRES 31 A 535 THR LEU LEU GLY PHE ARG TYR ARG SER SER ALA VAL LEU SEQRES 32 A 535 ALA THR ASP ASP ASP PRO ALA ARG VAL GLU ASN PRO LEU SEQRES 33 A 535 THR PRO SER GLY ARG PRO GLY PHE ARG GLY PRO HIS VAL SEQRES 34 A 535 LEU VAL SER ARG HIS GLY GLU ARG LEU SER THR VAL ASP SEQRES 35 A 535 LEU PHE GLY ASP GLY TRP THR LEU LEU ALA GLY GLU LEU SEQRES 36 A 535 GLY ALA ASP TRP VAL ALA ALA ALA GLU ALA VAL SER ALA SEQRES 37 A 535 GLU LEU GLY VAL PRO VAL ARG ALA TYR ARG VAL GLY ALA SEQRES 38 A 535 GLY LEU THR ASP PRO GLU SER ALA VAL SER GLU ARG TYR SEQRES 39 A 535 GLY ILE GLY LYS ALA GLY ALA SER LEU VAL ARG PRO ASP SEQRES 40 A 535 GLY ILE VAL ALA TRP ARG THR ASP GLU ALA ALA ALA ASP SEQRES 41 A 535 ALA ALA GLN THR LEU GLU GLY VAL LEU ARG ARG VAL LEU SEQRES 42 A 535 ASP ARG SEQRES 1 B 535 MET ASN ASP HIS GLU VAL ASP VAL LEU VAL VAL GLY ALA SEQRES 2 B 535 GLY LEU GLY GLY LEU SER THR ALA MET PHE LEU ALA ARG SEQRES 3 B 535 GLN GLY VAL ARG VAL LEU VAL VAL GLU ARG ARG PRO GLY SEQRES 4 B 535 LEU SER PRO TYR PRO ARG ALA ALA GLY GLN ASN PRO ARG SEQRES 5 B 535 THR MET GLU LEU LEU ARG ILE GLY GLY VAL ALA ASP GLU SEQRES 6 B 535 VAL VAL ARG ALA ASP ASP ILE ARG GLY THR GLN GLY ASP SEQRES 7 B 535 PHE VAL ILE ARG LEU ALA GLU SER VAL ARG GLY GLU ILE SEQRES 8 B 535 LEU ARG THR VAL SER GLU SER PHE ASP ASP MET VAL ALA SEQRES 9 B 535 ALA THR GLU PRO CYS THR PRO ALA GLY TRP ALA MET LEU SEQRES 10 B 535 SER GLN ASP LYS LEU GLU PRO ILE LEU LEU ALA GLN ALA SEQRES 11 B 535 ARG LYS HIS GLY GLY ALA ILE ARG PHE GLY THR ARG LEU SEQRES 12 B 535 LEU SER PHE ARG GLN HIS ASP ASP ASP ALA GLY ALA GLY SEQRES 13 B 535 VAL THR ALA ARG LEU ALA GLY PRO ASP GLY GLU TYR ASP SEQRES 14 B 535 LEU ARG ALA GLY TYR LEU VAL GLY ALA ASP GLY ASN ARG SEQRES 15 B 535 SER LEU VAL ARG GLU SER LEU GLY ILE GLY ARG TYR GLY SEQRES 16 B 535 HIS GLY THR LEU THR HIS MET VAL GLY VAL ILE PHE ASP SEQRES 17 B 535 ALA ASP LEU SER GLY ILE MET GLU PRO GLY THR THR GLY SEQRES 18 B 535 TRP TYR TYR LEU HIS HIS PRO GLU PHE LYS GLY THR PHE SEQRES 19 B 535 GLY PRO THR ASP ARG PRO ASP ARG HIS THR LEU PHE VAL SEQRES 20 B 535 GLU TYR ASP PRO ASP GLU GLY GLU ARG PRO GLU ASP PHE SEQRES 21 B 535 THR PRO GLN ARG CYS VAL GLU LEU ILE GLY LEU ALA LEU SEQRES 22 B 535 ASP ALA PRO GLU VAL LYS PRO GLU LEU VAL ASP ILE GLN SEQRES 23 B 535 GLY TRP GLU MET ALA ALA ARG ILE ALA GLU ARG TRP ARG SEQRES 24 B 535 GLU GLY ARG VAL PHE LEU ALA GLY ASP ALA ALA LYS VAL SEQRES 25 B 535 THR PRO PRO THR GLY GLY MET SER GLY ASN ALA ALA VAL SEQRES 26 B 535 ALA ASP GLY PHE ASP LEU ALA TRP LYS LEU ALA ALA VAL SEQRES 27 B 535 LEU GLN GLY GLN ALA GLY ALA GLY LEU LEU ASP THR TYR SEQRES 28 B 535 GLU ASP GLU ARG LYS VAL ALA ALA GLU LEU VAL VAL ALA SEQRES 29 B 535 GLU ALA LEU ALA ILE TYR ALA GLN ARG MET ALA PRO HIS SEQRES 30 B 535 MET ALA GLU VAL TRP ASP LYS SER VAL GLY TYR PRO GLU SEQRES 31 B 535 THR LEU LEU GLY PHE ARG TYR ARG SER SER ALA VAL LEU SEQRES 32 B 535 ALA THR ASP ASP ASP PRO ALA ARG VAL GLU ASN PRO LEU SEQRES 33 B 535 THR PRO SER GLY ARG PRO GLY PHE ARG GLY PRO HIS VAL SEQRES 34 B 535 LEU VAL SER ARG HIS GLY GLU ARG LEU SER THR VAL ASP SEQRES 35 B 535 LEU PHE GLY ASP GLY TRP THR LEU LEU ALA GLY GLU LEU SEQRES 36 B 535 GLY ALA ASP TRP VAL ALA ALA ALA GLU ALA VAL SER ALA SEQRES 37 B 535 GLU LEU GLY VAL PRO VAL ARG ALA TYR ARG VAL GLY ALA SEQRES 38 B 535 GLY LEU THR ASP PRO GLU SER ALA VAL SER GLU ARG TYR SEQRES 39 B 535 GLY ILE GLY LYS ALA GLY ALA SER LEU VAL ARG PRO ASP SEQRES 40 B 535 GLY ILE VAL ALA TRP ARG THR ASP GLU ALA ALA ALA ASP SEQRES 41 B 535 ALA ALA GLN THR LEU GLU GLY VAL LEU ARG ARG VAL LEU SEQRES 42 B 535 ASP ARG SEQRES 1 C 535 MET ASN ASP HIS GLU VAL ASP VAL LEU VAL VAL GLY ALA SEQRES 2 C 535 GLY LEU GLY GLY LEU SER THR ALA MET PHE LEU ALA ARG SEQRES 3 C 535 GLN GLY VAL ARG VAL LEU VAL VAL GLU ARG ARG PRO GLY SEQRES 4 C 535 LEU SER PRO TYR PRO ARG ALA ALA GLY GLN ASN PRO ARG SEQRES 5 C 535 THR MET GLU LEU LEU ARG ILE GLY GLY VAL ALA ASP GLU SEQRES 6 C 535 VAL VAL ARG ALA ASP ASP ILE ARG GLY THR GLN GLY ASP SEQRES 7 C 535 PHE VAL ILE ARG LEU ALA GLU SER VAL ARG GLY GLU ILE SEQRES 8 C 535 LEU ARG THR VAL SER GLU SER PHE ASP ASP MET VAL ALA SEQRES 9 C 535 ALA THR GLU PRO CYS THR PRO ALA GLY TRP ALA MET LEU SEQRES 10 C 535 SER GLN ASP LYS LEU GLU PRO ILE LEU LEU ALA GLN ALA SEQRES 11 C 535 ARG LYS HIS GLY GLY ALA ILE ARG PHE GLY THR ARG LEU SEQRES 12 C 535 LEU SER PHE ARG GLN HIS ASP ASP ASP ALA GLY ALA GLY SEQRES 13 C 535 VAL THR ALA ARG LEU ALA GLY PRO ASP GLY GLU TYR ASP SEQRES 14 C 535 LEU ARG ALA GLY TYR LEU VAL GLY ALA ASP GLY ASN ARG SEQRES 15 C 535 SER LEU VAL ARG GLU SER LEU GLY ILE GLY ARG TYR GLY SEQRES 16 C 535 HIS GLY THR LEU THR HIS MET VAL GLY VAL ILE PHE ASP SEQRES 17 C 535 ALA ASP LEU SER GLY ILE MET GLU PRO GLY THR THR GLY SEQRES 18 C 535 TRP TYR TYR LEU HIS HIS PRO GLU PHE LYS GLY THR PHE SEQRES 19 C 535 GLY PRO THR ASP ARG PRO ASP ARG HIS THR LEU PHE VAL SEQRES 20 C 535 GLU TYR ASP PRO ASP GLU GLY GLU ARG PRO GLU ASP PHE SEQRES 21 C 535 THR PRO GLN ARG CYS VAL GLU LEU ILE GLY LEU ALA LEU SEQRES 22 C 535 ASP ALA PRO GLU VAL LYS PRO GLU LEU VAL ASP ILE GLN SEQRES 23 C 535 GLY TRP GLU MET ALA ALA ARG ILE ALA GLU ARG TRP ARG SEQRES 24 C 535 GLU GLY ARG VAL PHE LEU ALA GLY ASP ALA ALA LYS VAL SEQRES 25 C 535 THR PRO PRO THR GLY GLY MET SER GLY ASN ALA ALA VAL SEQRES 26 C 535 ALA ASP GLY PHE ASP LEU ALA TRP LYS LEU ALA ALA VAL SEQRES 27 C 535 LEU GLN GLY GLN ALA GLY ALA GLY LEU LEU ASP THR TYR SEQRES 28 C 535 GLU ASP GLU ARG LYS VAL ALA ALA GLU LEU VAL VAL ALA SEQRES 29 C 535 GLU ALA LEU ALA ILE TYR ALA GLN ARG MET ALA PRO HIS SEQRES 30 C 535 MET ALA GLU VAL TRP ASP LYS SER VAL GLY TYR PRO GLU SEQRES 31 C 535 THR LEU LEU GLY PHE ARG TYR ARG SER SER ALA VAL LEU SEQRES 32 C 535 ALA THR ASP ASP ASP PRO ALA ARG VAL GLU ASN PRO LEU SEQRES 33 C 535 THR PRO SER GLY ARG PRO GLY PHE ARG GLY PRO HIS VAL SEQRES 34 C 535 LEU VAL SER ARG HIS GLY GLU ARG LEU SER THR VAL ASP SEQRES 35 C 535 LEU PHE GLY ASP GLY TRP THR LEU LEU ALA GLY GLU LEU SEQRES 36 C 535 GLY ALA ASP TRP VAL ALA ALA ALA GLU ALA VAL SER ALA SEQRES 37 C 535 GLU LEU GLY VAL PRO VAL ARG ALA TYR ARG VAL GLY ALA SEQRES 38 C 535 GLY LEU THR ASP PRO GLU SER ALA VAL SER GLU ARG TYR SEQRES 39 C 535 GLY ILE GLY LYS ALA GLY ALA SER LEU VAL ARG PRO ASP SEQRES 40 C 535 GLY ILE VAL ALA TRP ARG THR ASP GLU ALA ALA ALA ASP SEQRES 41 C 535 ALA ALA GLN THR LEU GLU GLY VAL LEU ARG ARG VAL LEU SEQRES 42 C 535 ASP ARG HET FAD A 536 53 HET VAK A 537 30 HET SO4 A 538 5 HET SO4 A 539 5 HET SO4 A 540 5 HET SO4 A 541 5 HET SO4 A 542 5 HET SO4 A 543 5 HET SO4 A 544 5 HET SO4 A 545 5 HET SO4 A 546 5 HET FAD B 536 53 HET VAK B 537 30 HET SO4 B 538 5 HET SO4 B 539 5 HET SO4 B 541 5 HET SO4 B 542 5 HET FAD C 536 53 HET VAK C 537 30 HET SO4 C 538 5 HET SO4 C 539 5 HET SO4 C 540 5 HET SO4 C 541 5 HET SO4 C 542 5 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM VAK METHYL (1R,2R,4S)-2-ETHYL-2,4,5,7-TETRAHYDROXY-6,11- HETNAM 2 VAK DIOXO-1,2,3,4,6,11-HEXAHYDROTETRACENE-1-CARBOXYLATE HETNAM SO4 SULFATE ION HETSYN VAK AKLAVINONE FORMUL 4 FAD 3(C27 H33 N9 O15 P2) FORMUL 5 VAK 3(C22 H20 O8) FORMUL 6 SO4 18(O4 S 2-) FORMUL 28 HOH *199(H2 O) HELIX 1 1 GLY A 14 ARG A 26 1 13 HELIX 2 2 ASN A 50 GLY A 60 1 11 HELIX 3 3 VAL A 62 ALA A 69 1 8 HELIX 4 4 SER A 98 ALA A 105 1 8 HELIX 5 5 THR A 106 THR A 110 5 5 HELIX 6 6 SER A 118 HIS A 133 1 16 HELIX 7 7 ASP A 150 GLY A 154 5 5 HELIX 8 8 SER A 183 LEU A 189 1 7 HELIX 9 9 ASP A 210 ILE A 214 5 5 HELIX 10 10 ARG A 256 PHE A 260 5 5 HELIX 11 11 THR A 261 ASP A 274 1 14 HELIX 12 12 MET A 319 GLN A 340 1 22 HELIX 13 13 GLY A 346 MET A 374 1 29 HELIX 14 14 ALA A 375 ALA A 379 5 5 HELIX 15 15 GLY A 387 LEU A 393 1 7 HELIX 16 16 VAL A 441 PHE A 444 5 4 HELIX 17 17 GLY A 456 GLY A 471 1 16 HELIX 18 18 ALA A 489 TYR A 494 1 6 HELIX 19 19 ASP A 520 LEU A 533 1 14 HELIX 20 20 GLY B 14 ARG B 26 1 13 HELIX 21 21 ASN B 50 GLY B 60 1 11 HELIX 22 22 VAL B 62 ALA B 69 1 8 HELIX 23 23 SER B 98 ALA B 105 1 8 HELIX 24 24 SER B 118 HIS B 133 1 16 HELIX 25 25 ASP B 150 GLY B 154 5 5 HELIX 26 26 SER B 183 LEU B 189 1 7 HELIX 27 27 ASP B 210 ILE B 214 5 5 HELIX 28 28 ARG B 256 PHE B 260 5 5 HELIX 29 29 THR B 261 ASP B 274 1 14 HELIX 30 30 GLY B 307 ALA B 309 5 3 HELIX 31 31 MET B 319 GLN B 340 1 22 HELIX 32 32 GLY B 344 LEU B 347 5 4 HELIX 33 33 LEU B 348 MET B 374 1 27 HELIX 34 34 ALA B 375 ALA B 379 5 5 HELIX 35 35 GLY B 387 LEU B 393 1 7 HELIX 36 36 VAL B 441 PHE B 444 5 4 HELIX 37 37 GLY B 456 GLY B 471 1 16 HELIX 38 38 ALA B 489 GLY B 495 1 7 HELIX 39 39 ASP B 520 LEU B 533 1 14 HELIX 40 40 GLY C 14 ARG C 26 1 13 HELIX 41 41 ASN C 50 GLY C 60 1 11 HELIX 42 42 VAL C 62 ALA C 69 1 8 HELIX 43 43 SER C 98 ALA C 105 1 8 HELIX 44 44 SER C 118 HIS C 133 1 16 HELIX 45 45 ASP C 150 GLY C 154 5 5 HELIX 46 46 SER C 183 LEU C 189 1 7 HELIX 47 47 ASP C 210 ILE C 214 5 5 HELIX 48 48 ARG C 256 PHE C 260 5 5 HELIX 49 49 THR C 261 ASP C 274 1 14 HELIX 50 50 GLY C 307 ALA C 309 5 3 HELIX 51 51 MET C 319 GLN C 340 1 22 HELIX 52 52 GLY C 346 MET C 374 1 29 HELIX 53 53 ALA C 375 ALA C 379 5 5 HELIX 54 54 GLY C 387 LEU C 393 1 7 HELIX 55 55 VAL C 441 PHE C 444 5 4 HELIX 56 56 GLY C 456 GLY C 471 1 16 HELIX 57 57 ALA C 489 GLY C 495 1 7 HELIX 58 58 ASP C 520 LEU C 533 1 14 SHEET 1 A 6 ALA A 136 ARG A 138 0 SHEET 2 A 6 VAL A 31 VAL A 34 1 N VAL A 33 O ARG A 138 SHEET 3 A 6 VAL A 6 VAL A 11 1 N VAL A 10 O LEU A 32 SHEET 4 A 6 GLY A 166 GLY A 177 1 O VAL A 176 N LEU A 9 SHEET 5 A 6 GLY A 156 GLY A 163 -1 N VAL A 157 O ALA A 172 SHEET 6 A 6 ARG A 142 HIS A 149 -1 N ARG A 142 O ALA A 162 SHEET 1 B 6 ALA A 136 ARG A 138 0 SHEET 2 B 6 VAL A 31 VAL A 34 1 N VAL A 33 O ARG A 138 SHEET 3 B 6 VAL A 6 VAL A 11 1 N VAL A 10 O LEU A 32 SHEET 4 B 6 GLY A 166 GLY A 177 1 O VAL A 176 N LEU A 9 SHEET 5 B 6 VAL A 303 LEU A 305 1 O PHE A 304 N GLY A 177 SHEET 6 B 6 ARG A 299 GLU A 300 -1 N GLU A 300 O VAL A 303 SHEET 1 C 8 ILE A 91 SER A 96 0 SHEET 2 C 8 VAL A 80 ALA A 84 -1 N LEU A 83 O ARG A 93 SHEET 3 C 8 GLY A 221 HIS A 226 1 O TYR A 224 N ARG A 82 SHEET 4 C 8 LYS A 231 PRO A 236 -1 O GLY A 232 N LEU A 225 SHEET 5 C 8 ARG A 242 TYR A 249 -1 O GLU A 248 N LYS A 231 SHEET 6 C 8 ARG A 193 ASP A 208 -1 N PHE A 207 O HIS A 243 SHEET 7 C 8 GLU A 281 ALA A 295 -1 O MET A 290 N LEU A 199 SHEET 8 C 8 LYS A 311 VAL A 312 -1 O VAL A 312 N ARG A 293 SHEET 1 D 2 LEU A 430 ARG A 433 0 SHEET 2 D 2 GLU A 436 SER A 439 -1 O GLU A 436 N ARG A 433 SHEET 1 E 4 VAL A 474 ARG A 478 0 SHEET 2 E 4 TRP A 448 ALA A 452 1 N ALA A 452 O TYR A 477 SHEET 3 E 4 ALA A 501 VAL A 504 -1 O VAL A 504 N THR A 449 SHEET 4 E 4 VAL A 510 THR A 514 -1 O ALA A 511 N LEU A 503 SHEET 1 F 6 ALA B 136 ARG B 138 0 SHEET 2 F 6 VAL B 31 VAL B 34 1 N VAL B 33 O ARG B 138 SHEET 3 F 6 VAL B 6 VAL B 11 1 N VAL B 10 O VAL B 34 SHEET 4 F 6 GLY B 166 GLY B 177 1 O VAL B 176 N LEU B 9 SHEET 5 F 6 GLY B 156 GLY B 163 -1 N ALA B 159 O LEU B 170 SHEET 6 F 6 ARG B 142 HIS B 149 -1 N LEU B 144 O ARG B 160 SHEET 1 G 6 ALA B 136 ARG B 138 0 SHEET 2 G 6 VAL B 31 VAL B 34 1 N VAL B 33 O ARG B 138 SHEET 3 G 6 VAL B 6 VAL B 11 1 N VAL B 10 O VAL B 34 SHEET 4 G 6 GLY B 166 GLY B 177 1 O VAL B 176 N LEU B 9 SHEET 5 G 6 VAL B 303 LEU B 305 1 O PHE B 304 N GLY B 177 SHEET 6 G 6 ARG B 299 GLU B 300 -1 N GLU B 300 O VAL B 303 SHEET 1 H 8 ILE B 91 SER B 96 0 SHEET 2 H 8 VAL B 80 ALA B 84 -1 N LEU B 83 O ARG B 93 SHEET 3 H 8 GLY B 221 HIS B 226 1 O TYR B 224 N ARG B 82 SHEET 4 H 8 LYS B 231 PRO B 236 -1 O GLY B 232 N LEU B 225 SHEET 5 H 8 ARG B 242 TYR B 249 -1 O GLU B 248 N LYS B 231 SHEET 6 H 8 ARG B 193 ASP B 208 -1 N PHE B 207 O HIS B 243 SHEET 7 H 8 GLU B 281 ALA B 295 -1 O GLN B 286 N GLY B 204 SHEET 8 H 8 LYS B 311 VAL B 312 -1 O VAL B 312 N ARG B 293 SHEET 1 I 2 LEU B 430 ARG B 433 0 SHEET 2 I 2 GLU B 436 SER B 439 -1 O LEU B 438 N VAL B 431 SHEET 1 J 4 VAL B 474 ARG B 478 0 SHEET 2 J 4 TRP B 448 ALA B 452 1 N ALA B 452 O TYR B 477 SHEET 3 J 4 ALA B 501 VAL B 504 -1 O VAL B 504 N THR B 449 SHEET 4 J 4 VAL B 510 THR B 514 -1 O ALA B 511 N LEU B 503 SHEET 1 K 6 ALA C 136 PHE C 139 0 SHEET 2 K 6 VAL C 31 GLU C 35 1 N VAL C 33 O ARG C 138 SHEET 3 K 6 VAL C 6 VAL C 11 1 N VAL C 10 O LEU C 32 SHEET 4 K 6 GLY C 166 GLY C 177 1 O VAL C 176 N LEU C 9 SHEET 5 K 6 GLY C 156 GLY C 163 -1 N ALA C 159 O LEU C 170 SHEET 6 K 6 ARG C 142 HIS C 149 -1 N SER C 145 O ARG C 160 SHEET 1 L 6 ALA C 136 PHE C 139 0 SHEET 2 L 6 VAL C 31 GLU C 35 1 N VAL C 33 O ARG C 138 SHEET 3 L 6 VAL C 6 VAL C 11 1 N VAL C 10 O LEU C 32 SHEET 4 L 6 GLY C 166 GLY C 177 1 O VAL C 176 N LEU C 9 SHEET 5 L 6 VAL C 303 LEU C 305 1 O PHE C 304 N GLY C 177 SHEET 6 L 6 ARG C 299 GLU C 300 -1 N GLU C 300 O VAL C 303 SHEET 1 M 8 ILE C 91 SER C 96 0 SHEET 2 M 8 VAL C 80 ALA C 84 -1 N LEU C 83 O ARG C 93 SHEET 3 M 8 GLY C 221 HIS C 226 1 O HIS C 226 N ALA C 84 SHEET 4 M 8 LYS C 231 PRO C 236 -1 O GLY C 232 N LEU C 225 SHEET 5 M 8 ARG C 242 TYR C 249 -1 O GLU C 248 N LYS C 231 SHEET 6 M 8 ARG C 193 ASP C 208 -1 N PHE C 207 O HIS C 243 SHEET 7 M 8 GLU C 281 ALA C 295 -1 O MET C 290 N LEU C 199 SHEET 8 M 8 LYS C 311 VAL C 312 -1 O VAL C 312 N ARG C 293 SHEET 1 N 2 LEU C 430 ARG C 433 0 SHEET 2 N 2 GLU C 436 SER C 439 -1 O GLU C 436 N ARG C 433 SHEET 1 O 4 VAL C 474 ARG C 478 0 SHEET 2 O 4 TRP C 448 ALA C 452 1 N ALA C 452 O TYR C 477 SHEET 3 O 4 ALA C 501 VAL C 504 -1 O VAL C 504 N THR C 449 SHEET 4 O 4 VAL C 510 THR C 514 -1 O TRP C 512 N LEU C 503 CISPEP 1 GLY A 154 ALA A 155 0 6.95 CISPEP 2 GLY B 154 ALA B 155 0 5.68 CISPEP 3 GLY C 154 ALA C 155 0 2.25 SITE 1 AC1 24 GLY A 12 GLY A 14 LEU A 15 GLY A 16 SITE 2 AC1 24 GLU A 35 ARG A 36 ARG A 45 ALA A 46 SITE 3 AC1 24 GLN A 119 THR A 141 ARG A 142 LEU A 143 SITE 4 AC1 24 ALA A 178 ASP A 179 GLY A 180 PHE A 246 SITE 5 AC1 24 TRP A 288 GLY A 307 ASP A 308 SER A 320 SITE 6 AC1 24 ALA A 324 VAK A 537 HOH A 568 HOH A 570 SITE 1 AC2 15 ALA A 47 ILE A 72 PHE A 79 MET A 202 SITE 2 AC2 15 TRP A 222 TYR A 224 THR A 233 PRO A 315 SITE 3 AC2 15 THR A 316 GLY A 317 GLY A 318 FAD A 536 SITE 4 AC2 15 HOH A 629 HOH A 641 HOH A 647 SITE 1 AC3 2 ARG A 530 ARG A 535 SITE 1 AC4 3 ARG A 93 ARG A 373 HOH A 562 SITE 1 AC5 3 GLY A 197 THR A 198 ARG A 293 SITE 1 AC6 5 ARG A 26 GLY A 61 GLN A 129 LYS A 132 SITE 2 AC6 5 HIS A 133 SITE 1 AC7 6 GLY A 74 THR A 75 GLN A 76 GLY A 218 SITE 2 AC7 6 THR A 219 THR A 220 SITE 1 AC8 2 ARG A 193 HOH A 571 SITE 1 AC9 3 ARG A 30 LEU A 32 ARG A 138 SITE 1 BC1 4 THR A 405 PRO A 422 ARG A 513 HOH A 548 SITE 1 BC2 4 LYS A 121 ARG A 239 ARG A 475 HOH A 589 SITE 1 BC3 27 GLY B 12 GLY B 14 LEU B 15 GLY B 16 SITE 2 BC3 27 GLU B 35 ARG B 36 ARG B 37 ARG B 45 SITE 3 BC3 27 ALA B 46 GLN B 119 THR B 141 ARG B 142 SITE 4 BC3 27 LEU B 143 ALA B 178 ASP B 179 GLY B 180 SITE 5 BC3 27 PHE B 246 TRP B 288 GLY B 307 ASP B 308 SITE 6 BC3 27 SER B 320 ALA B 324 VAK B 537 HOH B 544 SITE 7 BC3 27 HOH B 551 HOH B 555 HOH B 559 SITE 1 BC4 13 ALA B 47 ILE B 72 PHE B 79 MET B 202 SITE 2 BC4 13 TRP B 222 TYR B 224 PRO B 315 THR B 316 SITE 3 BC4 13 GLY B 317 GLY B 318 FAD B 536 HOH B 545 SITE 4 BC4 13 HOH B 554 SITE 1 BC5 2 ARG B 530 ARG B 535 SITE 1 BC6 2 ARG B 93 ARG B 373 SITE 1 BC7 5 ARG B 26 GLY B 61 GLN B 129 LYS B 132 SITE 2 BC7 5 HIS B 133 SITE 1 BC8 6 GLY B 74 THR B 75 GLN B 76 GLY B 218 SITE 2 BC8 6 THR B 219 THR B 220 SITE 1 BC9 26 GLY C 12 GLY C 14 LEU C 15 GLY C 16 SITE 2 BC9 26 GLU C 35 ARG C 36 ARG C 37 ARG C 45 SITE 3 BC9 26 ALA C 46 GLN C 119 THR C 141 LEU C 143 SITE 4 BC9 26 ALA C 178 ASP C 179 GLY C 180 LEU C 184 SITE 5 BC9 26 PHE C 246 GLN C 286 TRP C 288 GLY C 307 SITE 6 BC9 26 ASP C 308 SER C 320 ALA C 324 VAK C 537 SITE 7 BC9 26 HOH C 546 HOH C 550 SITE 1 CC1 13 ALA C 47 ILE C 72 PHE C 79 MET C 116 SITE 2 CC1 13 MET C 202 TRP C 222 TYR C 224 THR C 233 SITE 3 CC1 13 PRO C 315 THR C 316 GLY C 317 GLY C 318 SITE 4 CC1 13 FAD C 536 SITE 1 CC2 2 ARG C 530 ARG C 535 SITE 1 CC3 4 ARG C 93 GLN C 372 ARG C 373 HOH C 561 SITE 1 CC4 3 GLY C 197 THR C 198 ARG C 293 SITE 1 CC5 5 ARG C 26 GLY C 61 GLN C 129 LYS C 132 SITE 2 CC5 5 HIS C 133 SITE 1 CC6 6 GLY C 74 THR C 75 GLN C 76 GLY C 218 SITE 2 CC6 6 THR C 219 THR C 220 CRYST1 183.035 183.035 99.639 90.00 90.00 120.00 P 63 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005463 0.003154 0.000000 0.00000 SCALE2 0.000000 0.006309 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010036 0.00000