HEADER TRANSFERASE 05-AUG-09 3IJW TITLE CRYSTAL STRUCTURE OF BA2930 IN COMPLEX WITH COA COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMINOGLYCOSIDE N3-ACETYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS ANTHRACIS; SOURCE 3 ORGANISM_TAXID: 198094; SOURCE 4 STRAIN: AMES; SOURCE 5 GENE: AACC7, BA_2930, GBAA2930, GBAA_2930; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS ANTHRAX, COA, TRANSFERASE, ACYLTRANSFERASE, STRUCTURAL GENOMICS, KEYWDS 2 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES, CSGID EXPDTA X-RAY DIFFRACTION AUTHOR M.M.KLIMECKA,M.CHRUSZCZ,T.SKARINA,O.ONOPRYIENKO,M.CYMBOROWSKI, AUTHOR 2 A.SAVCHENKO,A.EDWARDS,W.ANDERSON,W.MINOR,CENTER FOR STRUCTURAL AUTHOR 3 GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 6 20-NOV-24 3IJW 1 REMARK REVDAT 5 22-NOV-23 3IJW 1 REMARK REVDAT 4 06-SEP-23 3IJW 1 REMARK REVDAT 3 13-APR-22 3IJW 1 AUTHOR JRNL REMARK SEQADV REVDAT 3 2 1 LINK REVDAT 2 03-AUG-11 3IJW 1 JRNL REVDAT 1 13-OCT-09 3IJW 0 JRNL AUTH M.M.KLIMECKA,M.CHRUSZCZ,J.FONT,T.SKARINA,I.SHUMILIN, JRNL AUTH 2 O.ONOPRYIENKO,P.J.POREBSKI,M.CYMBOROWSKI,M.D.ZIMMERMAN, JRNL AUTH 3 J.HASSEMAN,I.J.GLOMSKI,L.LEBIODA,A.SAVCHENKO,A.EDWARDS, JRNL AUTH 4 W.MINOR JRNL TITL STRUCTURAL ANALYSIS OF A PUTATIVE AMINOGLYCOSIDE JRNL TITL 2 N-ACETYLTRANSFERASE FROM BACILLUS ANTHRACIS. JRNL REF J.MOL.BIOL. V. 410 411 2011 JRNL REFN ISSN 0022-2836 JRNL PMID 21601576 JRNL DOI 10.1016/J.JMB.2011.04.076 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0072 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.60 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 41511 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2203 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3010 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.28 REMARK 3 BIN R VALUE (WORKING SET) : 0.2690 REMARK 3 BIN FREE R VALUE SET COUNT : 152 REMARK 3 BIN FREE R VALUE : 0.3120 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4115 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 100 REMARK 3 SOLVENT ATOMS : 336 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.17000 REMARK 3 B22 (A**2) : -0.26000 REMARK 3 B33 (A**2) : 0.09000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.159 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.148 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.101 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.476 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4332 ; 0.022 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2905 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5899 ; 1.699 ; 1.978 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7104 ; 4.188 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 533 ; 6.052 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 178 ;34.442 ;24.157 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 732 ;14.400 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;18.410 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 661 ; 0.122 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4745 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 845 ; 0.011 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2645 ; 0.977 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1078 ; 0.000 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4303 ; 1.743 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1687 ; 3.084 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1596 ; 4.643 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 0 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 LOOSE POSITIONAL 1 A (A): 3401 ; 0.48 ; 5.00 REMARK 3 LOOSE THERMAL 1 A (A**2): 3401 ; 2.96 ; 10.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 65 REMARK 3 RESIDUE RANGE : B 1 B 73 REMARK 3 ORIGIN FOR THE GROUP (A): 11.7100 -0.5060 9.9360 REMARK 3 T TENSOR REMARK 3 T11: 0.1227 T22: 0.1096 REMARK 3 T33: 0.0327 T12: -0.0128 REMARK 3 T13: -0.0092 T23: 0.0289 REMARK 3 L TENSOR REMARK 3 L11: 0.1900 L22: 2.1302 REMARK 3 L33: 1.4446 L12: 0.1628 REMARK 3 L13: -0.0335 L23: -1.1170 REMARK 3 S TENSOR REMARK 3 S11: 0.0529 S12: -0.0499 S13: -0.0744 REMARK 3 S21: -0.0223 S22: -0.1321 S23: -0.1242 REMARK 3 S31: 0.2094 S32: 0.0713 S33: 0.0791 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 66 A 110 REMARK 3 RESIDUE RANGE : B 74 B 127 REMARK 3 ORIGIN FOR THE GROUP (A): 12.3330 -1.7460 8.8120 REMARK 3 T TENSOR REMARK 3 T11: 0.1751 T22: 0.1360 REMARK 3 T33: 0.1185 T12: -0.0102 REMARK 3 T13: -0.0216 T23: 0.0437 REMARK 3 L TENSOR REMARK 3 L11: 0.4806 L22: 0.8138 REMARK 3 L33: 2.0375 L12: 0.2172 REMARK 3 L13: 0.3182 L23: -0.7757 REMARK 3 S TENSOR REMARK 3 S11: 0.0449 S12: -0.0440 S13: -0.1929 REMARK 3 S21: 0.0560 S22: -0.1182 S23: -0.1632 REMARK 3 S31: 0.2045 S32: 0.2080 S33: 0.0732 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 111 A 264 REMARK 3 RESIDUE RANGE : B 128 B 264 REMARK 3 ORIGIN FOR THE GROUP (A): 10.7270 -0.0360 8.3210 REMARK 3 T TENSOR REMARK 3 T11: 0.0793 T22: 0.0961 REMARK 3 T33: 0.0440 T12: -0.0017 REMARK 3 T13: -0.0137 T23: 0.0013 REMARK 3 L TENSOR REMARK 3 L11: 0.3271 L22: 0.5431 REMARK 3 L33: 1.4407 L12: 0.1648 REMARK 3 L13: -0.1351 L23: -0.4238 REMARK 3 S TENSOR REMARK 3 S11: 0.0168 S12: -0.0655 S13: -0.1084 REMARK 3 S21: 0.0205 S22: -0.0067 S23: -0.0395 REMARK 3 S31: 0.1369 S32: -0.0073 S33: -0.0101 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3IJW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-AUG-09. REMARK 100 THE DEPOSITION ID IS D_1000054503. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-JUN-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44002 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 34.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : 0.09000 REMARK 200 FOR THE DATA SET : 28.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 6.20 REMARK 200 R MERGE FOR SHELL (I) : 0.55500 REMARK 200 R SYM FOR SHELL (I) : 0.55500 REMARK 200 FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-3000, MOLREP REMARK 200 STARTING MODEL: 3E4F REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES PH 7.5, 0.2M MGCL2, 15% W/V REMARK 280 PEG3350, 10 MM BUTYRYL-COA, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 18.42700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.78250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.97850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 66.78250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 18.42700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.97850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ASN A 265 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 ASN B 265 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 196 CE NZ REMARK 470 LYS A 221 CG CD CE NZ REMARK 470 ASN B 2 CG OD1 ND2 REMARK 470 GLN B 9 CG CD OE1 NE2 REMARK 470 LYS B 23 CD CE NZ REMARK 470 LYS B 196 CG CD CE NZ REMARK 470 LYS B 232 CG CD CE NZ REMARK 470 LYS B 244 CG CD CE NZ REMARK 470 GLU B 259 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 60 165.81 66.09 REMARK 500 ASN A 204 53.21 33.57 REMARK 500 THR B 60 164.89 66.71 REMARK 500 ILE B 104 -41.04 -135.46 REMARK 500 ASN B 122 -3.48 77.92 REMARK 500 ASN B 204 73.53 38.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 ACO A 266 REMARK 610 ACO B 266 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 270 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 370 O REMARK 620 2 HOH A 371 O 93.1 REMARK 620 3 HOH A 389 O 84.7 166.6 REMARK 620 4 HOH A 418 O 81.6 75.3 91.3 REMARK 620 5 HOH A 482 O 103.5 89.1 104.2 163.9 REMARK 620 6 HOH B 388 O 160.6 90.9 87.1 81.1 95.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACO A 266 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 267 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 268 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 269 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 270 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACO B 266 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: IDP00044 RELATED DB: TARGETDB DBREF 3IJW A 1 265 UNP Q81P86 Q81P86_BACAN 1 265 DBREF 3IJW B 1 265 UNP Q81P86 Q81P86_BACAN 1 265 SEQADV 3IJW SER A -2 UNP Q81P86 EXPRESSION TAG SEQADV 3IJW ASN A -1 UNP Q81P86 EXPRESSION TAG SEQADV 3IJW ALA A 0 UNP Q81P86 EXPRESSION TAG SEQADV 3IJW SER B -2 UNP Q81P86 EXPRESSION TAG SEQADV 3IJW ASN B -1 UNP Q81P86 EXPRESSION TAG SEQADV 3IJW ALA B 0 UNP Q81P86 EXPRESSION TAG SEQRES 1 A 268 SER ASN ALA MSE ASN ASP ILE VAL ALA SER THR GLN LEU SEQRES 2 A 268 PRO ASN THR ILE LYS THR ILE THR ASN ASP LEU ARG LYS SEQRES 3 A 268 LEU GLY LEU LYS LYS GLY MSE THR VAL ILE VAL HIS SER SEQRES 4 A 268 SER LEU SER SER ILE GLY TRP ILE SER GLY GLY ALA VAL SEQRES 5 A 268 ALA VAL VAL GLU ALA LEU MSE GLU VAL ILE THR GLU GLU SEQRES 6 A 268 GLY THR ILE ILE MSE PRO THR GLN SER SER ASP LEU SER SEQRES 7 A 268 ASP PRO LYS HIS TRP SER ARG PRO PRO VAL PRO GLU GLU SEQRES 8 A 268 TRP TRP GLN ILE ILE ARG ASP ASN VAL PRO ALA PHE GLU SEQRES 9 A 268 PRO HIS ILE THR PRO THR ARG ALA MSE GLY LYS VAL VAL SEQRES 10 A 268 GLU CYS PHE ARG THR TYR PRO ASN VAL VAL ARG SER ASN SEQRES 11 A 268 HIS PRO LEU GLY SER PHE ALA ALA TRP GLY ARG HIS ALA SEQRES 12 A 268 GLU GLU ILE THR VAL ASN GLN SER LEU SER MSE SER LEU SEQRES 13 A 268 GLY GLU GLU SER PRO LEU ARG LYS ILE TYR ASP LEU ASP SEQRES 14 A 268 GLY TYR ILE LEU LEU ILE GLY VAL GLY TYR ASP SER ASN SEQRES 15 A 268 THR SER VAL HIS LEU SER GLU VAL ARG SER GLY ALA CYS SEQRES 16 A 268 GLU LEU ILE LYS VAL GLY ALA PRO ILE ILE GLU ASN GLY SEQRES 17 A 268 GLU ARG VAL TRP LYS GLU PHE VAL ASP MSE ASP TYR ASP SEQRES 18 A 268 SER ASP LYS PHE VAL GLU ILE GLY VAL GLU PHE GLU GLN SEQRES 19 A 268 LYS GLY THR VAL THR MSE GLY LYS ILE GLY ASN ALA LYS SEQRES 20 A 268 CYS ARG LEU MSE LYS GLN ARG ASP ILE VAL ASP PHE GLY SEQRES 21 A 268 THR GLU TRP PHE ARG LYS LYS ASN SEQRES 1 B 268 SER ASN ALA MSE ASN ASP ILE VAL ALA SER THR GLN LEU SEQRES 2 B 268 PRO ASN THR ILE LYS THR ILE THR ASN ASP LEU ARG LYS SEQRES 3 B 268 LEU GLY LEU LYS LYS GLY MSE THR VAL ILE VAL HIS SER SEQRES 4 B 268 SER LEU SER SER ILE GLY TRP ILE SER GLY GLY ALA VAL SEQRES 5 B 268 ALA VAL VAL GLU ALA LEU MSE GLU VAL ILE THR GLU GLU SEQRES 6 B 268 GLY THR ILE ILE MSE PRO THR GLN SER SER ASP LEU SER SEQRES 7 B 268 ASP PRO LYS HIS TRP SER ARG PRO PRO VAL PRO GLU GLU SEQRES 8 B 268 TRP TRP GLN ILE ILE ARG ASP ASN VAL PRO ALA PHE GLU SEQRES 9 B 268 PRO HIS ILE THR PRO THR ARG ALA MSE GLY LYS VAL VAL SEQRES 10 B 268 GLU CYS PHE ARG THR TYR PRO ASN VAL VAL ARG SER ASN SEQRES 11 B 268 HIS PRO LEU GLY SER PHE ALA ALA TRP GLY ARG HIS ALA SEQRES 12 B 268 GLU GLU ILE THR VAL ASN GLN SER LEU SER MSE SER LEU SEQRES 13 B 268 GLY GLU GLU SER PRO LEU ARG LYS ILE TYR ASP LEU ASP SEQRES 14 B 268 GLY TYR ILE LEU LEU ILE GLY VAL GLY TYR ASP SER ASN SEQRES 15 B 268 THR SER VAL HIS LEU SER GLU VAL ARG SER GLY ALA CYS SEQRES 16 B 268 GLU LEU ILE LYS VAL GLY ALA PRO ILE ILE GLU ASN GLY SEQRES 17 B 268 GLU ARG VAL TRP LYS GLU PHE VAL ASP MSE ASP TYR ASP SEQRES 18 B 268 SER ASP LYS PHE VAL GLU ILE GLY VAL GLU PHE GLU GLN SEQRES 19 B 268 LYS GLY THR VAL THR MSE GLY LYS ILE GLY ASN ALA LYS SEQRES 20 B 268 CYS ARG LEU MSE LYS GLN ARG ASP ILE VAL ASP PHE GLY SEQRES 21 B 268 THR GLU TRP PHE ARG LYS LYS ASN MODRES 3IJW MSE A 1 MET SELENOMETHIONINE MODRES 3IJW MSE A 30 MET SELENOMETHIONINE MODRES 3IJW MSE A 56 MET SELENOMETHIONINE MODRES 3IJW MSE A 67 MET SELENOMETHIONINE MODRES 3IJW MSE A 110 MET SELENOMETHIONINE MODRES 3IJW MSE A 151 MET SELENOMETHIONINE MODRES 3IJW MSE A 215 MET SELENOMETHIONINE MODRES 3IJW MSE A 237 MET SELENOMETHIONINE MODRES 3IJW MSE A 248 MET SELENOMETHIONINE MODRES 3IJW MSE B 1 MET SELENOMETHIONINE MODRES 3IJW MSE B 30 MET SELENOMETHIONINE MODRES 3IJW MSE B 56 MET SELENOMETHIONINE MODRES 3IJW MSE B 67 MET SELENOMETHIONINE MODRES 3IJW MSE B 110 MET SELENOMETHIONINE MODRES 3IJW MSE B 151 MET SELENOMETHIONINE MODRES 3IJW MSE B 215 MET SELENOMETHIONINE MODRES 3IJW MSE B 237 MET SELENOMETHIONINE MODRES 3IJW MSE B 248 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 30 8 HET MSE A 56 8 HET MSE A 67 8 HET MSE A 110 8 HET MSE A 151 8 HET MSE A 215 8 HET MSE A 237 8 HET MSE A 248 8 HET MSE B 1 8 HET MSE B 30 8 HET MSE B 56 8 HET MSE B 67 8 HET MSE B 110 8 HET MSE B 151 8 HET MSE B 215 16 HET MSE B 237 8 HET MSE B 248 8 HET ACO A 266 48 HET CL A 267 1 HET CL A 268 1 HET CL A 269 1 HET MG A 270 1 HET ACO B 266 48 HETNAM MSE SELENOMETHIONINE HETNAM ACO ACETYL COENZYME *A HETNAM CL CHLORIDE ION HETNAM MG MAGNESIUM ION FORMUL 1 MSE 18(C5 H11 N O2 SE) FORMUL 3 ACO 2(C23 H38 N7 O17 P3 S) FORMUL 4 CL 3(CL 1-) FORMUL 7 MG MG 2+ FORMUL 9 HOH *336(H2 O) HELIX 1 1 ALA A 0 SER A 7 1 8 HELIX 2 2 THR A 13 GLY A 25 1 13 HELIX 3 3 LEU A 38 GLY A 42 5 5 HELIX 4 4 GLY A 46 THR A 60 1 15 HELIX 5 5 SER A 71 SER A 75 5 5 HELIX 6 6 ASP A 76 TRP A 80 5 5 HELIX 7 7 PRO A 86 VAL A 97 1 12 HELIX 8 8 GLY A 111 THR A 119 1 9 HELIX 9 9 HIS A 139 VAL A 145 1 7 HELIX 10 10 SER A 157 LEU A 165 1 9 HELIX 11 11 GLY A 175 THR A 180 5 6 HELIX 12 12 SER A 181 GLY A 190 1 10 HELIX 13 13 ASP A 218 ASP A 220 5 3 HELIX 14 14 LYS A 221 GLN A 231 1 11 HELIX 15 15 GLN A 250 LYS A 263 1 14 HELIX 16 16 MSE B 1 SER B 7 1 7 HELIX 17 17 THR B 13 GLY B 25 1 13 HELIX 18 18 LEU B 38 GLY B 42 5 5 HELIX 19 19 GLY B 46 THR B 60 1 15 HELIX 20 20 SER B 71 SER B 75 5 5 HELIX 21 21 ASP B 76 TRP B 80 5 5 HELIX 22 22 PRO B 86 GLU B 88 5 3 HELIX 23 23 TRP B 89 VAL B 97 1 9 HELIX 24 24 GLY B 111 TYR B 120 1 10 HELIX 25 25 HIS B 139 VAL B 145 1 7 HELIX 26 26 SER B 157 LEU B 165 1 9 HELIX 27 27 GLY B 175 THR B 180 5 6 HELIX 28 28 SER B 181 GLY B 190 1 10 HELIX 29 29 LYS B 221 GLN B 231 1 11 HELIX 30 30 GLN B 250 LYS B 264 1 15 SHEET 1 A 7 VAL A 124 ARG A 125 0 SHEET 2 A 7 PHE A 133 GLY A 137 -1 O ALA A 135 N VAL A 124 SHEET 3 A 7 THR A 64 PRO A 68 -1 N ILE A 65 O TRP A 136 SHEET 4 A 7 THR A 31 SER A 36 1 N VAL A 32 O THR A 64 SHEET 5 A 7 TYR A 168 ILE A 172 1 O TYR A 168 N THR A 31 SHEET 6 A 7 ALA A 243 LYS A 249 -1 O MSE A 248 N ILE A 169 SHEET 7 A 7 THR A 236 ILE A 240 -1 N GLY A 238 O CYS A 245 SHEET 1 B 2 LEU A 194 GLU A 203 0 SHEET 2 B 2 GLU A 206 MSE A 215 -1 O LYS A 210 N ALA A 199 SHEET 1 C 7 VAL B 124 ARG B 125 0 SHEET 2 C 7 PHE B 133 GLY B 137 -1 O ALA B 135 N VAL B 124 SHEET 3 C 7 THR B 64 PRO B 68 -1 N ILE B 65 O TRP B 136 SHEET 4 C 7 THR B 31 SER B 36 1 N VAL B 34 O ILE B 66 SHEET 5 C 7 TYR B 168 ILE B 172 1 O LEU B 170 N ILE B 33 SHEET 6 C 7 ALA B 243 LYS B 249 -1 O MSE B 248 N ILE B 169 SHEET 7 C 7 THR B 236 ILE B 240 -1 N GLY B 238 O CYS B 245 SHEET 1 D 2 LEU B 194 GLU B 203 0 SHEET 2 D 2 GLU B 206 MSE B 215 -1 O VAL B 208 N ILE B 201 LINK C ALA A 0 N MSE A 1 1555 1555 1.31 LINK C MSE A 1 N ASN A 2 1555 1555 1.32 LINK C GLY A 29 N MSE A 30 1555 1555 1.32 LINK C MSE A 30 N THR A 31 1555 1555 1.34 LINK C LEU A 55 N MSE A 56 1555 1555 1.34 LINK C MSE A 56 N GLU A 57 1555 1555 1.34 LINK C ILE A 66 N MSE A 67 1555 1555 1.32 LINK C MSE A 67 N PRO A 68 1555 1555 1.33 LINK C ALA A 109 N MSE A 110 1555 1555 1.33 LINK C MSE A 110 N GLY A 111 1555 1555 1.33 LINK C SER A 150 N MSE A 151 1555 1555 1.32 LINK C MSE A 151 N SER A 152 1555 1555 1.32 LINK C ASP A 214 N MSE A 215 1555 1555 1.33 LINK C MSE A 215 N ASP A 216 1555 1555 1.34 LINK C THR A 236 N MSE A 237 1555 1555 1.32 LINK C MSE A 237 N GLY A 238 1555 1555 1.33 LINK C LEU A 247 N MSE A 248 1555 1555 1.33 LINK C MSE A 248 N LYS A 249 1555 1555 1.34 LINK C MSE B 1 N ASN B 2 1555 1555 1.34 LINK C GLY B 29 N MSE B 30 1555 1555 1.33 LINK C MSE B 30 N THR B 31 1555 1555 1.34 LINK C LEU B 55 N MSE B 56 1555 1555 1.33 LINK C MSE B 56 N GLU B 57 1555 1555 1.32 LINK C ILE B 66 N MSE B 67 1555 1555 1.31 LINK C MSE B 67 N PRO B 68 1555 1555 1.31 LINK C ALA B 109 N MSE B 110 1555 1555 1.33 LINK C MSE B 110 N GLY B 111 1555 1555 1.32 LINK C SER B 150 N MSE B 151 1555 1555 1.33 LINK C MSE B 151 N SER B 152 1555 1555 1.32 LINK C ASP B 214 N AMSE B 215 1555 1555 1.30 LINK C ASP B 214 N BMSE B 215 1555 1555 1.30 LINK C AMSE B 215 N ASP B 216 1555 1555 1.33 LINK C BMSE B 215 N ASP B 216 1555 1555 1.32 LINK C THR B 236 N MSE B 237 1555 1555 1.33 LINK C MSE B 237 N GLY B 238 1555 1555 1.32 LINK C LEU B 247 N MSE B 248 1555 1555 1.33 LINK C MSE B 248 N LYS B 249 1555 1555 1.32 LINK MG MG A 270 O HOH A 370 1555 1555 1.86 LINK MG MG A 270 O HOH A 371 1555 1555 1.92 LINK MG MG A 270 O HOH A 389 1555 1555 1.89 LINK MG MG A 270 O HOH A 418 1555 1555 2.16 LINK MG MG A 270 O HOH A 482 1555 1555 1.85 LINK MG MG A 270 O HOH B 388 1555 1555 1.80 CISPEP 1 ARG A 82 PRO A 83 0 2.67 CISPEP 2 ARG B 82 PRO B 83 0 2.51 SITE 1 AC1 22 MSE A 1 ILE A 4 HIS A 35 SER A 36 SITE 2 AC1 22 SER A 37 LEU A 38 SER A 39 GLY A 42 SITE 3 AC1 22 ILE A 44 GLY A 47 PRO A 68 GLN A 70 SITE 4 AC1 22 ALA A 109 MSE A 110 GLY A 111 LYS A 112 SITE 5 AC1 22 VAL A 174 SER A 178 THR A 180 HOH A 289 SITE 6 AC1 22 HOH A 323 HOH A 378 SITE 1 AC2 4 MSE A 30 THR A 31 HOH A 295 HOH A 308 SITE 1 AC3 4 ARG A 262 HOH A 420 ARG B 262 HOH B 317 SITE 1 AC4 2 ALA A 243 LYS A 244 SITE 1 AC5 6 HOH A 370 HOH A 371 HOH A 389 HOH A 418 SITE 2 AC5 6 HOH A 482 HOH B 388 SITE 1 AC6 21 MSE B 1 ILE B 4 HIS B 35 SER B 36 SITE 2 AC6 21 SER B 37 LEU B 38 SER B 39 GLY B 42 SITE 3 AC6 21 ILE B 44 GLY B 47 PRO B 68 GLN B 70 SITE 4 AC6 21 ALA B 109 MSE B 110 GLY B 111 LYS B 112 SITE 5 AC6 21 VAL B 174 SER B 178 THR B 180 HOH B 280 SITE 6 AC6 21 HOH B 323 CRYST1 36.854 109.957 133.565 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027134 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009094 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007487 0.00000