HEADER ISOMERASE 05-AUG-09 3IKD TITLE STRUCTURE-BASED DESIGN OF NOVEL PIN1 INHIBITORS (I) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 45-163, PIN1 PPIASE DOMAIN; COMPND 5 SYNONYM: ROTAMASE PIN1, PPIASE PIN1; COMPND 6 EC: 5.2.1.8; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PIN1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SBDD, PPIASE, CELL CYCLE, ISOMERASE, SMALL MOLECULE, NUCLEUS, KEYWDS 2 PHOSPHOPROTEIN, ROTAMASE EXPDTA X-RAY DIFFRACTION AUTHOR D.MATTHEWS,S.GREASLEY,R.FERRE,H.PARGE REVDAT 3 21-FEB-24 3IKD 1 REMARK REVDAT 2 13-OCT-21 3IKD 1 REMARK SEQADV REVDAT 1 22-SEP-09 3IKD 0 JRNL AUTH C.GUO,X.HOU,L.DONG,E.DAGOSTINO,S.GREASLEY,R.FERRE, JRNL AUTH 2 J.MARAKOVITS,M.C.JOHNSON,D.MATTHEWS,B.MROCZKOWSKI,H.PARGE, JRNL AUTH 3 T.VANARSDALE,I.POPOFF,J.PIRAINO,S.MARGOSIAK,J.THOMSON,G.LOS, JRNL AUTH 4 B.W.MURRAY JRNL TITL STRUCTURE-BASED DESIGN OF NOVEL HUMAN PIN1 INHIBITORS (I). JRNL REF BIOORG.MED.CHEM.LETT. V. 19 5613 2009 JRNL REFN ISSN 0960-894X JRNL PMID 19729306 JRNL DOI 10.1016/J.BMCL.2009.08.034 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 5.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 12666 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NONE SELECTED REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.08 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2706 REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 0 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1750 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 52 REMARK 3 SOLVENT ATOMS : 158 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3IKD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-AUG-09. REMARK 100 THE DEPOSITION ID IS D_1000054520. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-NOV-00 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : OSMIC MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14274 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.3300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.42 REMARK 200 R MERGE FOR SHELL (I) : 0.17100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 7.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM SULFATE, 0.9M NA REMARK 280 CITRATE, 5MM TCEP, 100MM HEPES: COMPOUND @ 500UM SOAKED INTO APO REMARK 280 CRYSTAL FOR 60HRS. , PH 8.0 , VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 286K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 58.67700 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 18.01400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 58.67700 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 18.01400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 41 REMARK 465 SER A 42 REMARK 465 HIS A 43 REMARK 465 MET A 44 REMARK 465 GLY A 45 REMARK 465 LYS A 46 REMARK 465 ASN A 47 REMARK 465 GLY A 48 REMARK 465 GLN A 49 REMARK 465 GLY A 50 REMARK 465 GLY B 41 REMARK 465 SER B 42 REMARK 465 HIS B 43 REMARK 465 MET B 44 REMARK 465 GLY B 45 REMARK 465 LYS B 46 REMARK 465 ASN B 47 REMARK 465 GLY B 48 REMARK 465 GLN B 49 REMARK 465 GLY B 50 REMARK 465 GLU B 51 REMARK 465 PRO B 52 REMARK 465 ALA B 53 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 87 CG CD OE1 OE2 REMARK 470 GLN B 94 CG CD OE1 NE2 REMARK 470 LYS B 95 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH22 ARG A 80 H1 HOH A 166 1.28 REMARK 500 H2 HOH A 177 O HOH A 202 1.38 REMARK 500 H1 HOH B 37 O HOH B 190 1.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CD ARG B 68 H12 J9Z B 502 2556 1.25 REMARK 500 HG1 THR B 81 H2 HOH A 9 1566 1.27 REMARK 500 HG1 THR B 143 H1 HOH A 217 1565 1.32 REMARK 500 OE1 GLU A 135 HH12 ARG B 142 1545 1.36 REMARK 500 OE1 GLN A 129 HH22 ARG B 161 1545 1.41 REMARK 500 O GLN B 129 H1 HOH B 168 2556 1.52 REMARK 500 HH21 ARG A 74 OE1 GLN B 82 1544 1.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 64 CG HIS A 64 CD2 0.056 REMARK 500 HIS B 59 CG HIS B 59 CD2 0.061 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 VAL A 62 CG1 - CB - CG2 ANGL. DEV. = -10.3 DEGREES REMARK 500 ARG A 68 CA - CB - CG ANGL. DEV. = 14.7 DEGREES REMARK 500 ARG A 68 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG A 80 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG A 127 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG B 56 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG B 119 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG B 119 NE - CZ - NH2 ANGL. DEV. = -5.5 DEGREES REMARK 500 ARG B 127 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 118 32.60 -91.73 REMARK 500 ALA B 118 31.86 -98.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE J9Z A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE J9Z B 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3I6C RELATED DB: PDB REMARK 900 SAME PROTEIN COMPLEXED WITH SMALL MOLECULE INHIBITOR REMARK 900 RELATED ID: 3IK8 RELATED DB: PDB REMARK 900 SAME PROTEIN: APO STRUCTURE REMARK 900 RELATED ID: 3IKG RELATED DB: PDB REMARK 900 SAME PROTEIN COMPLEXED WITH SMALL MOLECULE INHIBITOR DBREF 3IKD A 45 163 UNP Q13526 PIN1_HUMAN 45 163 DBREF 3IKD B 45 163 UNP Q13526 PIN1_HUMAN 45 163 SEQADV 3IKD GLY A 41 UNP Q13526 EXPRESSION TAG SEQADV 3IKD SER A 42 UNP Q13526 EXPRESSION TAG SEQADV 3IKD HIS A 43 UNP Q13526 EXPRESSION TAG SEQADV 3IKD MET A 44 UNP Q13526 EXPRESSION TAG SEQADV 3IKD GLN A 77 UNP Q13526 LYS 77 ENGINEERED MUTATION SEQADV 3IKD GLN A 82 UNP Q13526 LYS 82 ENGINEERED MUTATION SEQADV 3IKD GLY B 41 UNP Q13526 EXPRESSION TAG SEQADV 3IKD SER B 42 UNP Q13526 EXPRESSION TAG SEQADV 3IKD HIS B 43 UNP Q13526 EXPRESSION TAG SEQADV 3IKD MET B 44 UNP Q13526 EXPRESSION TAG SEQADV 3IKD GLN B 77 UNP Q13526 LYS 77 ENGINEERED MUTATION SEQADV 3IKD GLN B 82 UNP Q13526 LYS 82 ENGINEERED MUTATION SEQRES 1 A 123 GLY SER HIS MET GLY LYS ASN GLY GLN GLY GLU PRO ALA SEQRES 2 A 123 ARG VAL ARG CYS SER HIS LEU LEU VAL LYS HIS SER GLN SEQRES 3 A 123 SER ARG ARG PRO SER SER TRP ARG GLN GLU GLN ILE THR SEQRES 4 A 123 ARG THR GLN GLU GLU ALA LEU GLU LEU ILE ASN GLY TYR SEQRES 5 A 123 ILE GLN LYS ILE LYS SER GLY GLU GLU ASP PHE GLU SER SEQRES 6 A 123 LEU ALA SER GLN PHE SER ASP CYS SER SER ALA LYS ALA SEQRES 7 A 123 ARG GLY ASP LEU GLY ALA PHE SER ARG GLY GLN MET GLN SEQRES 8 A 123 LYS PRO PHE GLU ASP ALA SER PHE ALA LEU ARG THR GLY SEQRES 9 A 123 GLU MET SER GLY PRO VAL PHE THR ASP SER GLY ILE HIS SEQRES 10 A 123 ILE ILE LEU ARG THR GLU SEQRES 1 B 123 GLY SER HIS MET GLY LYS ASN GLY GLN GLY GLU PRO ALA SEQRES 2 B 123 ARG VAL ARG CYS SER HIS LEU LEU VAL LYS HIS SER GLN SEQRES 3 B 123 SER ARG ARG PRO SER SER TRP ARG GLN GLU GLN ILE THR SEQRES 4 B 123 ARG THR GLN GLU GLU ALA LEU GLU LEU ILE ASN GLY TYR SEQRES 5 B 123 ILE GLN LYS ILE LYS SER GLY GLU GLU ASP PHE GLU SER SEQRES 6 B 123 LEU ALA SER GLN PHE SER ASP CYS SER SER ALA LYS ALA SEQRES 7 B 123 ARG GLY ASP LEU GLY ALA PHE SER ARG GLY GLN MET GLN SEQRES 8 B 123 LYS PRO PHE GLU ASP ALA SER PHE ALA LEU ARG THR GLY SEQRES 9 B 123 GLU MET SER GLY PRO VAL PHE THR ASP SER GLY ILE HIS SEQRES 10 B 123 ILE ILE LEU ARG THR GLU HET J9Z A 501 42 HET J9Z B 502 42 HETNAM J9Z (2R)-2-[(1-BENZOTHIOPHEN-2-YLCARBONYL)AMINO]-3- HETNAM 2 J9Z PHENYLPROPYL PHOSPHATE FORMUL 3 J9Z 2(C18 H16 N O5 P S 2-) FORMUL 5 HOH *158(H2 O) HELIX 1 1 THR A 81 GLY A 99 1 19 HELIX 2 2 ASP A 102 SER A 111 1 10 HELIX 3 3 CYS A 113 ARG A 119 5 7 HELIX 4 4 GLN A 131 ALA A 140 1 10 HELIX 5 5 THR B 81 SER B 98 1 18 HELIX 6 6 ASP B 102 SER B 111 1 10 HELIX 7 7 CYS B 113 ARG B 119 5 7 HELIX 8 8 GLN B 131 ALA B 140 1 10 SHEET 1 A 4 ASP A 121 PHE A 125 0 SHEET 2 A 4 VAL A 55 VAL A 62 -1 N CYS A 57 O LEU A 122 SHEET 3 A 4 GLY A 155 GLU A 163 -1 O ILE A 156 N VAL A 62 SHEET 4 A 4 VAL A 150 THR A 152 -1 N VAL A 150 O HIS A 157 SHEET 1 B 4 ASP B 121 PHE B 125 0 SHEET 2 B 4 VAL B 55 VAL B 62 -1 N CYS B 57 O LEU B 122 SHEET 3 B 4 GLY B 155 GLU B 163 -1 O LEU B 160 N SER B 58 SHEET 4 B 4 VAL B 150 THR B 152 -1 N VAL B 150 O HIS B 157 SITE 1 AC1 14 HIS A 59 LEU A 61 LYS A 63 ARG A 68 SITE 2 AC1 14 ARG A 69 CYS A 113 SER A 114 LEU A 122 SITE 3 AC1 14 GLN A 131 PHE A 134 SER A 154 HIS A 157 SITE 4 AC1 14 HOH A 165 HOH A 216 SITE 1 AC2 9 LYS B 63 ARG B 68 ARG B 69 CYS B 113 SITE 2 AC2 9 LEU B 122 SER B 154 HIS B 157 HOH B 165 SITE 3 AC2 9 HOH B 175 CRYST1 117.354 36.028 51.281 90.00 100.30 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008521 0.000000 0.001548 0.00000 SCALE2 0.000000 0.027756 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019820 0.00000