HEADER TRANSFERASE 06-AUG-09 3IL6 TITLE STRUCTURE OF E. FAECALIS FABH IN COMPLEX WITH 2-({4-[(3R,5S)-3,5- TITLE 2 DIMETHYLPIPERIDIN-1-YL]-3-PHENOXYBENZOYL}AMINO)BENZOIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 3; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE III, BETA- COMPND 5 KETOACYL-ACP SYNTHASE III, KAS III; COMPND 6 EC: 2.3.1.180; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROCOCCUS FAECALIS; SOURCE 3 ORGANISM_TAXID: 1351; SOURCE 4 GENE: EF_2885, FABH; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FABH, FATTY ACID BIOSYNTHESIS, ANTIBIOTIC, ACYLTRANSFERASE, KEYWDS 2 CYTOPLASM, LIPID SYNTHESIS, MULTIFUNCTIONAL ENZYME, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.S.GAJIWALA,S.MARGOSIAK,J.LU,J.CORTEZ,Y.SU,Z.NIE,K.APPELT REVDAT 4 06-SEP-23 3IL6 1 REMARK REVDAT 3 13-OCT-21 3IL6 1 REMARK SEQADV LINK REVDAT 2 06-OCT-09 3IL6 1 JRNL REVDAT 1 25-AUG-09 3IL6 0 JRNL AUTH K.S.GAJIWALA,S.MARGOSIAK,J.LU,J.CORTEZ,Y.SU,Z.NIE,K.APPELT JRNL TITL CRYSTAL STRUCTURES OF BACTERIAL FABH SUGGEST A MOLECULAR JRNL TITL 2 BASIS FOR THE SUBSTRATE SPECIFICITY OF THE ENZYME. JRNL REF FEBS LETT. V. 583 2939 2009 JRNL REFN ISSN 0014-5793 JRNL PMID 19665020 JRNL DOI 10.1016/J.FEBSLET.2009.08.001 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNX REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN,ACCELRYS REMARK 3 : SOFTWARE INC.(BADGER,BERARD,KUMAR,SZALMA, REMARK 3 : YIP,DZAKULA) REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.36 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 519487.020 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 96.5 REMARK 3 NUMBER OF REFLECTIONS : 19129 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1874 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 20488 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.66 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2713 REMARK 3 BIN R VALUE (WORKING SET) : 0.2290 REMARK 3 BIN FREE R VALUE : 0.2680 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.50 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 285 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.016 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2460 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 63 REMARK 3 SOLVENT ATOMS : 112 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 39.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -8.12000 REMARK 3 B22 (A**2) : -8.12000 REMARK 3 B33 (A**2) : 16.25000 REMARK 3 B12 (A**2) : 0.89000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.26 REMARK 3 ESD FROM SIGMAA (A) : 0.24 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.31 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.32 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.80 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.770 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.220 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.010 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.110 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.040 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.36 REMARK 3 BSOL : 38.95 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : 2059.PARAM REMARK 3 PARAMETER FILE 4 : SO4.PARAM REMARK 3 PARAMETER FILE 5 : CIS_PEPTIDE.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3IL6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-AUG-09. REMARK 100 THE DEPOSITION ID IS D_1000054549. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-04 REMARK 200 TEMPERATURE (KELVIN) : 120 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : ENRAF-NONIUS FR591 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19811 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : 0.07300 REMARK 200 R SYM (I) : 0.07300 REMARK 200 FOR THE DATA SET : 21.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 4.60 REMARK 200 R MERGE FOR SHELL (I) : 0.36100 REMARK 200 R SYM FOR SHELL (I) : 0.36100 REMARK 200 FOR SHELL : 4.330 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNX REMARK 200 STARTING MODEL: 3IL5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 3350, 0.2 M AMMONIUM SULFATE, REMARK 280 0.1 M BIS-TRIS, PH 5.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 288K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.94733 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 22.97367 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 22.97367 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 45.94733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -49.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 -357.78900 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 206.56958 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 206.76300 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 5 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH1 ARG A 262 O ASN A 296 2684 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 15 149.24 -172.04 REMARK 500 GLN A 53 -11.41 -149.27 REMARK 500 ALA A 115 35.69 -149.02 REMARK 500 ALA A 116 -134.03 47.18 REMARK 500 TRP A 153 25.15 -74.07 REMARK 500 THR A 158 -47.32 -147.71 REMARK 500 ALA A 212 116.41 -164.77 REMARK 500 LYS A 214 -10.90 85.20 REMARK 500 ASN A 274 37.06 -161.12 REMARK 500 SER A 282 -126.69 50.24 REMARK 500 SER A 282 -127.26 49.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE B83 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 407 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3IL3 RELATED DB: PDB REMARK 900 STRUCTURE OF HAEMOPHILUS INFLUENZAE FABH REMARK 900 RELATED ID: 3IL4 RELATED DB: PDB REMARK 900 STRUCTURE OF E. FAECALIS FABH IN COMPLEX WITH ACETYL COA REMARK 900 RELATED ID: 3IL5 RELATED DB: PDB REMARK 900 STRUCTURE OF E. FAECALIS FABH IN COMPLEX WITH 2-({4-BROMO-3- REMARK 900 [(DIETHYLAMINO)SULFONYL]BENZOYL}AMINO)BENZOIC ACID REMARK 900 RELATED ID: 3IL7 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF S. AUREUS FABH REMARK 900 RELATED ID: 3IL9 RELATED DB: PDB REMARK 900 STRUCTURE OF E. COLI FABH DBREF 3IL6 A 5 325 UNP Q820T1 FABH_ENTFA 1 321 SEQADV 3IL6 ALA A 36 UNP Q820T1 ASP 32 ENGINEERED MUTATION SEQADV 3IL6 ALA A 37 UNP Q820T1 GLU 33 ENGINEERED MUTATION SEQADV 3IL6 THR A 192 UNP Q820T1 ALA 188 ENGINEERED MUTATION SEQRES 1 A 321 MET LYS ASN TYR ALA ARG ILE SER CYS THR SER ARG TYR SEQRES 2 A 321 VAL PRO GLU ASN CYS VAL THR ASN HIS GLN LEU SER GLU SEQRES 3 A 321 MET MET ASP THR SER ALA ALA TRP ILE HIS SER ARG THR SEQRES 4 A 321 GLY ILE SER GLU ARG ARG ILE VAL THR GLN GLU ASN THR SEQRES 5 A 321 SER ASP LEU CYS HIS GLN VAL ALA LYS GLN LEU LEU GLU SEQRES 6 A 321 LYS SER GLY LYS GLN ALA SER GLU ILE ASP PHE ILE LEU SEQRES 7 A 321 VAL ALA THR VAL THR PRO ASP PHE ASN MET PRO SER VAL SEQRES 8 A 321 ALA CYS GLN VAL GLN GLY ALA ILE GLY ALA THR GLU ALA SEQRES 9 A 321 PHE ALA PHE ASP ILE SER ALA ALA SCY SER GLY PHE VAL SEQRES 10 A 321 TYR ALA LEU SER MET ALA GLU LYS LEU VAL LEU SER GLY SEQRES 11 A 321 ARG TYR GLN THR GLY LEU VAL ILE GLY GLY GLU THR PHE SEQRES 12 A 321 SER LYS MET LEU ASP TRP THR ASP ARG SER THR ALA VAL SEQRES 13 A 321 LEU PHE GLY ASP GLY ALA ALA GLY VAL LEU ILE GLU ALA SEQRES 14 A 321 ALA GLU THR PRO HIS PHE LEU ASN GLU LYS LEU GLN ALA SEQRES 15 A 321 ASP GLY GLN ARG TRP THR ALA LEU THR SER GLY TYR THR SEQRES 16 A 321 ILE ASN GLU SER PRO PHE TYR GLN GLY HIS LYS GLN ALA SEQRES 17 A 321 SER LYS THR LEU GLN MET GLU GLY ARG SER ILE PHE ASP SEQRES 18 A 321 PHE ALA ILE LYS ASP VAL SER GLN ASN ILE LEU SER LEU SEQRES 19 A 321 VAL THR ASP GLU THR VAL ASP TYR LEU LEU LEU HIS GLN SEQRES 20 A 321 ALA ASN VAL ARG ILE ILE ASP LYS ILE ALA ARG LYS THR SEQRES 21 A 321 LYS ILE SER ARG GLU LYS PHE LEU THR ASN MET ASP LYS SEQRES 22 A 321 TYR GLY ASN THR SER ALA ALA SER ILE PRO ILE LEU LEU SEQRES 23 A 321 ASP GLU ALA VAL GLU ASN GLY THR LEU ILE LEU GLY SER SEQRES 24 A 321 GLN GLN ARG VAL VAL LEU THR GLY PHE GLY GLY GLY LEU SEQRES 25 A 321 THR TRP GLY SER LEU LEU LEU THR LEU MODRES 3IL6 SCY A 117 CYS S-ACETYL-CYSTEINE HET SCY A 117 9 HET B83 A 401 33 HET SO4 A 402 5 HET SO4 A 403 5 HET SO4 A 404 5 HET SO4 A 405 5 HET SO4 A 406 5 HET SO4 A 407 5 HETNAM SCY S-ACETYL-CYSTEINE HETNAM B83 2-[({4-[(3R,5S)-3,5-DIMETHYLPIPERIDIN-1-YL]-3- HETNAM 2 B83 PHENOXYPHENYL}CARBONYL)AMINO]BENZOIC ACID HETNAM SO4 SULFATE ION HETSYN B83 2-({4-[(3R,5S)-3,5-DIMETHYLPIPERIDIN-1-YL]-3- HETSYN 2 B83 PHENOXYBENZOYL}AMINO)BENZOIC ACID FORMUL 1 SCY C5 H9 N O3 S FORMUL 2 B83 C27 H28 N2 O4 FORMUL 3 SO4 6(O4 S 2-) FORMUL 9 HOH *112(H2 O) HELIX 1 1 ASN A 25 MET A 32 1 8 HELIX 2 2 SER A 35 GLY A 44 1 10 HELIX 3 3 ASN A 55 GLY A 72 1 18 HELIX 4 4 GLN A 74 ILE A 78 5 5 HELIX 5 5 SER A 94 ILE A 103 1 10 HELIX 6 6 ALA A 115 SCY A 117 5 3 HELIX 7 7 SER A 118 SER A 133 1 16 HELIX 8 8 THR A 146 LEU A 151 5 6 HELIX 9 9 THR A 158 PHE A 162 5 5 HELIX 10 10 GLY A 188 THR A 192 5 5 HELIX 11 11 GLU A 219 SER A 237 1 19 HELIX 12 12 THR A 240 VAL A 244 5 5 HELIX 13 13 ASN A 253 LYS A 265 1 13 HELIX 14 14 SER A 267 PHE A 271 5 5 HELIX 15 15 ASN A 274 TYR A 278 5 5 HELIX 16 16 THR A 281 ALA A 283 5 3 HELIX 17 17 ALA A 284 ASN A 296 1 13 SHEET 1 A 5 TYR A 8 TYR A 17 0 SHEET 2 A 5 GLY A 165 ALA A 174 -1 O ALA A 174 N TYR A 8 SHEET 3 A 5 GLY A 139 GLU A 145 -1 N GLY A 139 O ILE A 171 SHEET 4 A 5 PHE A 80 ALA A 84 1 N LEU A 82 O LEU A 140 SHEET 5 A 5 PHE A 109 ILE A 113 1 O ILE A 113 N VAL A 83 SHEET 1 B 2 CYS A 22 THR A 24 0 SHEET 2 B 2 GLU A 47 ARG A 49 -1 O ARG A 48 N VAL A 23 SHEET 1 C 4 PHE A 179 ALA A 186 0 SHEET 2 C 4 THR A 317 THR A 324 -1 O TRP A 318 N GLN A 185 SHEET 3 C 4 ARG A 306 GLY A 313 -1 N VAL A 307 O LEU A 323 SHEET 4 C 4 TYR A 246 LEU A 249 1 N LEU A 248 O VAL A 308 SHEET 1 D 2 LEU A 194 THR A 195 0 SHEET 2 D 2 GLN A 217 MET A 218 -1 O GLN A 217 N THR A 195 LINK C ALA A 116 N SCY A 117 1555 1555 1.33 LINK C SCY A 117 N SER A 118 1555 1555 1.34 CISPEP 1 MET A 92 PRO A 93 0 0.54 CISPEP 2 GLY A 315 LEU A 316 0 -0.09 SITE 1 AC1 15 ARG A 42 SCY A 117 SER A 157 LEU A 161 SITE 2 AC1 15 GLY A 220 ARG A 221 ILE A 223 PHE A 224 SITE 3 AC1 15 HIS A 250 ALA A 252 ILE A 256 ASN A 280 SITE 4 AC1 15 PHE A 312 GLY A 313 HOH A 386 SITE 1 AC2 7 ARG A 10 TRP A 38 ALA A 174 GLU A 175 SITE 2 AC2 7 THR A 176 HIS A 178 SO4 A 403 SITE 1 AC3 7 LYS A 6 ARG A 10 ASP A 33 THR A 34 SITE 2 AC3 7 ARG A 156 GLU A 175 SO4 A 402 SITE 1 AC4 3 LYS A 259 ARG A 262 HOH A 329 SITE 1 AC5 3 ARG A 221 LYS A 259 HOH A 362 SITE 1 AC6 5 THR A 273 ASN A 274 MET A 275 ASP A 276 SITE 2 AC6 5 HOH A 336 SITE 1 AC7 3 ARG A 49 HOH A 375 HOH A 397 CRYST1 119.263 119.263 68.921 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008385 0.004841 0.000000 0.00000 SCALE2 0.000000 0.009682 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014509 0.00000