HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 07-AUG-09 3ILK TITLE THE STRUCTURE OF A PROBABLE METHYLASE FAMILY PROTEIN FROM HAEMOPHILUS TITLE 2 INFLUENZAE RD KW20 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED TRNA/RRNA METHYLTRANSFERASE HI0380; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.1.1.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HAEMOPHILUS INFLUENZAE; SOURCE 3 ORGANISM_TAXID: 727; SOURCE 4 STRAIN: RD KW20; SOURCE 5 GENE: HAEMOPHILUS INFLUENZAE, HI0380; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: PPK1037; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG19 KEYWDS APC63004, METHYLASE FAMILY PROTEIN, HAEMOPHILUS INFLUENZAE RD KW20, KEYWDS 2 STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE INITIATIVE, MIDWEST KEYWDS 3 CENTER FOR STRUCTURAL GENOMICS, MCSG, METHYLTRANSFERASE, KEYWDS 4 TRANSFERASE, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR K.TAN,H.LI,K.BUCK,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL GENOMICS AUTHOR 2 (MCSG) REVDAT 2 13-JUL-11 3ILK 1 VERSN REVDAT 1 01-SEP-09 3ILK 0 JRNL AUTH K.TAN,H.LI,K.BUCK,A.JOACHIMIAK JRNL TITL THE STRUCTURE OF A PROBABLE METHYLASE FAMILY PROTEIN FROM JRNL TITL 2 HAEMOPHILUS INFLUENZAE RD KW20 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0054 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.01 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.56 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 3 NUMBER OF REFLECTIONS : 35020 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1838 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.01 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.06 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1888 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 71.95 REMARK 3 BIN R VALUE (WORKING SET) : 0.2730 REMARK 3 BIN FREE R VALUE SET COUNT : 95 REMARK 3 BIN FREE R VALUE : 0.3370 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3696 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 34 REMARK 3 SOLVENT ATOMS : 119 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.26000 REMARK 3 B22 (A**2) : 0.15000 REMARK 3 B33 (A**2) : 1.12000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.191 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.170 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.138 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.223 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3831 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5165 ; 1.591 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 484 ; 6.091 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 176 ;37.476 ;24.091 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 717 ;18.358 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 31 ;18.714 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 598 ; 0.114 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2817 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2370 ; 0.891 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3806 ; 1.517 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1461 ; 2.621 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1351 ; 3.883 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -1 A 169 REMARK 3 ORIGIN FOR THE GROUP (A): 42.8700 33.9420 66.9320 REMARK 3 T TENSOR REMARK 3 T11: 0.2000 T22: 0.1100 REMARK 3 T33: 0.0183 T12: 0.0087 REMARK 3 T13: -0.0284 T23: -0.0008 REMARK 3 L TENSOR REMARK 3 L11: 2.4078 L22: 2.9279 REMARK 3 L33: 1.2600 L12: -0.2673 REMARK 3 L13: -0.6103 L23: 0.3458 REMARK 3 S TENSOR REMARK 3 S11: 0.0672 S12: -0.0009 S13: 0.1466 REMARK 3 S21: 0.1141 S22: -0.0462 S23: -0.1377 REMARK 3 S31: -0.0562 S32: -0.0317 S33: -0.0210 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 171 A 238 REMARK 3 ORIGIN FOR THE GROUP (A): 37.2490 78.6810 96.9530 REMARK 3 T TENSOR REMARK 3 T11: 0.2994 T22: 0.5361 REMARK 3 T33: 0.0561 T12: 0.0491 REMARK 3 T13: -0.0141 T23: 0.0960 REMARK 3 L TENSOR REMARK 3 L11: 6.2318 L22: 8.0469 REMARK 3 L33: 10.1945 L12: 1.4357 REMARK 3 L13: 1.6875 L23: -5.1790 REMARK 3 S TENSOR REMARK 3 S11: -0.0808 S12: -0.1495 S13: 0.1091 REMARK 3 S21: 0.2410 S22: 0.7145 S23: 0.2636 REMARK 3 S31: -0.3618 S32: -1.6097 S33: -0.6337 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 164 REMARK 3 ORIGIN FOR THE GROUP (A): 35.6790 56.3120 59.0130 REMARK 3 T TENSOR REMARK 3 T11: 0.2855 T22: 0.0998 REMARK 3 T33: 0.0201 T12: 0.0161 REMARK 3 T13: -0.0407 T23: 0.0074 REMARK 3 L TENSOR REMARK 3 L11: 2.5032 L22: 4.6774 REMARK 3 L33: 1.9941 L12: 0.3214 REMARK 3 L13: 0.7536 L23: 0.2348 REMARK 3 S TENSOR REMARK 3 S11: -0.0145 S12: 0.1519 S13: 0.0467 REMARK 3 S21: -0.3588 S22: -0.0251 S23: 0.2847 REMARK 3 S31: -0.1225 S32: -0.0852 S33: 0.0397 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 170 B 238 REMARK 3 ORIGIN FOR THE GROUP (A): 33.9310 78.1050 83.7310 REMARK 3 T TENSOR REMARK 3 T11: 0.6590 T22: 0.8391 REMARK 3 T33: 0.0969 T12: -0.1141 REMARK 3 T13: -0.1723 T23: 0.2055 REMARK 3 L TENSOR REMARK 3 L11: 8.5770 L22: 13.8008 REMARK 3 L33: 7.3364 L12: -1.9455 REMARK 3 L13: -1.3982 L23: -3.0078 REMARK 3 S TENSOR REMARK 3 S11: -0.0238 S12: 0.7813 S13: 0.0340 REMARK 3 S21: -1.6445 S22: 0.6981 S23: 0.7269 REMARK 3 S31: 0.6102 S32: -1.5612 S33: -0.6743 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3ILK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-AUG-09. REMARK 100 THE RCSB ID CODE IS RCSB054562. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-MAR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97931 REMARK 200 MONOCHROMATOR : SI 111 CRYSTAL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36940 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 41.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.09200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 76.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : 0.84100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD/MLPHARE/DM/ARP/WARP/HKL3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES, 10%W/V PEG8000, 8%V/V REMARK 280 ETHYLENE GLYCOL, PH 7.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.08350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.05550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.19600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 62.05550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.08350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.19600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS STATE THAT THE BIOLOGICAL UNIT IS EXPERIMENTALLY REMARK 300 UNKNOWN. THE CHAINS A AND B LIKELY FORM A DIMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7060 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -51.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ILE A 170 REMARK 465 GLU A 239 REMARK 465 ASP A 240 REMARK 465 ASN A 241 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 ASN B 165 REMARK 465 SER B 166 REMARK 465 LEU B 167 REMARK 465 SER B 168 REMARK 465 LEU B 169 REMARK 465 GLU B 239 REMARK 465 ASP B 240 REMARK 465 ASN B 241 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A -1 CG OD1 REMARK 470 MSE A 1 CG SE CE REMARK 470 SER A 168 OG REMARK 470 LEU A 169 CG CD1 CD2 REMARK 470 GLU A 171 CG CD OE1 OE2 REMARK 470 LYS A 172 CG CD CE NZ REMARK 470 ILE B 170 CG1 CG2 CD1 REMARK 470 LYS B 172 CG CD CE NZ REMARK 470 ASN B 173 CG OD1 REMARK 470 TYR B 174 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 PRO B 175 CG CD REMARK 470 LYS B 238 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 11 73.21 43.81 REMARK 500 SER A 13 -88.81 -99.40 REMARK 500 ALA A 52 31.50 -99.31 REMARK 500 ASP A 70 126.61 -39.73 REMARK 500 ILE A 115 -46.62 -137.79 REMARK 500 TYR A 137 72.54 -165.03 REMARK 500 LYS A 172 5.46 -49.90 REMARK 500 LYS A 214 80.68 59.62 REMARK 500 SER B 37 64.74 30.85 REMARK 500 ALA B 50 70.22 36.01 REMARK 500 TYR B 137 78.72 -164.80 REMARK 500 LYS B 163 -37.94 -132.65 REMARK 500 GLU B 171 130.84 174.06 REMARK 500 TYR B 174 -130.15 -146.30 REMARK 500 LYS B 214 71.57 52.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 242 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 243 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 242 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 243 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 244 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 245 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 246 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 247 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC63004 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 PRO73SER IS A CLONING MUTATION COMPARED TO THE TARGET DB SEQUENCE REMARK 999 NYSGXRC-6012A DBREF 3ILK A 1 241 UNP P44676 Y380_HAEIN 1 241 DBREF 3ILK B 1 241 UNP P44676 Y380_HAEIN 1 241 SEQADV 3ILK SER A -2 UNP P44676 EXPRESSION TAG SEQADV 3ILK ASN A -1 UNP P44676 EXPRESSION TAG SEQADV 3ILK ALA A 0 UNP P44676 EXPRESSION TAG SEQADV 3ILK SER B -2 UNP P44676 EXPRESSION TAG SEQADV 3ILK ASN B -1 UNP P44676 EXPRESSION TAG SEQADV 3ILK ALA B 0 UNP P44676 EXPRESSION TAG SEQRES 1 A 244 SER ASN ALA MSE LEU GLU ASN ILE ARG ILE VAL LEU ILE SEQRES 2 A 244 GLU THR SER HIS SER GLY ASN ILE GLY SER ALA ALA ARG SEQRES 3 A 244 ALA MSE LYS THR MSE GLY LEU THR GLN LEU CYS LEU VAL SEQRES 4 A 244 SER PRO LYS SER VAL ASP GLU GLN SER TYR ALA LEU SER SEQRES 5 A 244 ALA GLY ALA GLU ASN ILE VAL LYS ASN ALA ARG VAL VAL SEQRES 6 A 244 ASP SER PHE ASP GLU ALA VAL ASP ASP CYS SER LEU VAL SEQRES 7 A 244 ILE GLY THR SER ALA ARG LEU ARG HIS LEU GLN ASN THR SEQRES 8 A 244 LEU ILE GLU PRO ARG GLU CYS ALA GLU LYS VAL VAL ALA SEQRES 9 A 244 TYR LYS GLY LYS ILE ALA ILE VAL PHE GLY ARG GLU ARG SEQRES 10 A 244 ILE GLY LEU THR ASN GLU GLU LEU LEU LYS CYS HIS TYR SEQRES 11 A 244 HIS LEU ASN ILE PRO ALA ASN PRO ASP TYR SER SER LEU SEQRES 12 A 244 ASN LEU ALA MSE ALA VAL GLN LEU VAL SER TYR GLU LEU SEQRES 13 A 244 ARG MSE ALA PHE LEU VAL GLN ASN ASN LYS LYS ASN SER SEQRES 14 A 244 LEU SER LEU ILE GLU LYS ASN TYR PRO THR THR ASP GLN SEQRES 15 A 244 LEU ALA TYR PHE PHE ASP TYR THR GLU ARG ILE TYR GLN SEQRES 16 A 244 SER LEU GLY PHE ILE GLN ASN GLN GLY VAL MSE ARG LYS SEQRES 17 A 244 LEU LYS ARG LEU TYR TYR ARG ALA LYS LEU GLU LYS ASN SEQRES 18 A 244 GLU LEU ASN ILE LEU ASN GLY MSE LEU SER ALA VAL GLU SEQRES 19 A 244 LYS ARG ILE ASP LEU THR LYS GLU ASP ASN SEQRES 1 B 244 SER ASN ALA MSE LEU GLU ASN ILE ARG ILE VAL LEU ILE SEQRES 2 B 244 GLU THR SER HIS SER GLY ASN ILE GLY SER ALA ALA ARG SEQRES 3 B 244 ALA MSE LYS THR MSE GLY LEU THR GLN LEU CYS LEU VAL SEQRES 4 B 244 SER PRO LYS SER VAL ASP GLU GLN SER TYR ALA LEU SER SEQRES 5 B 244 ALA GLY ALA GLU ASN ILE VAL LYS ASN ALA ARG VAL VAL SEQRES 6 B 244 ASP SER PHE ASP GLU ALA VAL ASP ASP CYS SER LEU VAL SEQRES 7 B 244 ILE GLY THR SER ALA ARG LEU ARG HIS LEU GLN ASN THR SEQRES 8 B 244 LEU ILE GLU PRO ARG GLU CYS ALA GLU LYS VAL VAL ALA SEQRES 9 B 244 TYR LYS GLY LYS ILE ALA ILE VAL PHE GLY ARG GLU ARG SEQRES 10 B 244 ILE GLY LEU THR ASN GLU GLU LEU LEU LYS CYS HIS TYR SEQRES 11 B 244 HIS LEU ASN ILE PRO ALA ASN PRO ASP TYR SER SER LEU SEQRES 12 B 244 ASN LEU ALA MSE ALA VAL GLN LEU VAL SER TYR GLU LEU SEQRES 13 B 244 ARG MSE ALA PHE LEU VAL GLN ASN ASN LYS LYS ASN SER SEQRES 14 B 244 LEU SER LEU ILE GLU LYS ASN TYR PRO THR THR ASP GLN SEQRES 15 B 244 LEU ALA TYR PHE PHE ASP TYR THR GLU ARG ILE TYR GLN SEQRES 16 B 244 SER LEU GLY PHE ILE GLN ASN GLN GLY VAL MSE ARG LYS SEQRES 17 B 244 LEU LYS ARG LEU TYR TYR ARG ALA LYS LEU GLU LYS ASN SEQRES 18 B 244 GLU LEU ASN ILE LEU ASN GLY MSE LEU SER ALA VAL GLU SEQRES 19 B 244 LYS ARG ILE ASP LEU THR LYS GLU ASP ASN MODRES 3ILK MSE A 1 MET SELENOMETHIONINE MODRES 3ILK MSE A 25 MET SELENOMETHIONINE MODRES 3ILK MSE A 28 MET SELENOMETHIONINE MODRES 3ILK MSE A 144 MET SELENOMETHIONINE MODRES 3ILK MSE A 155 MET SELENOMETHIONINE MODRES 3ILK MSE A 203 MET SELENOMETHIONINE MODRES 3ILK MSE A 226 MET SELENOMETHIONINE MODRES 3ILK MSE B 1 MET SELENOMETHIONINE MODRES 3ILK MSE B 25 MET SELENOMETHIONINE MODRES 3ILK MSE B 28 MET SELENOMETHIONINE MODRES 3ILK MSE B 144 MET SELENOMETHIONINE MODRES 3ILK MSE B 155 MET SELENOMETHIONINE MODRES 3ILK MSE B 203 MET SELENOMETHIONINE MODRES 3ILK MSE B 226 MET SELENOMETHIONINE HET MSE A 1 5 HET MSE A 25 8 HET MSE A 28 8 HET MSE A 144 8 HET MSE A 155 8 HET MSE A 203 8 HET MSE A 226 8 HET MSE B 1 8 HET MSE B 25 8 HET MSE B 28 8 HET MSE B 144 8 HET MSE B 155 8 HET MSE B 203 8 HET MSE B 226 8 HET EDO A 242 4 HET EDO A 243 4 HET EDO B 242 4 HET EDO B 243 4 HET EDO B 244 4 HET ACT B 245 4 HET SO4 B 246 5 HET SO4 B 247 5 HETNAM MSE SELENOMETHIONINE HETNAM EDO 1,2-ETHANEDIOL HETNAM ACT ACETATE ION HETNAM SO4 SULFATE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 14(C5 H11 N O2 SE) FORMUL 3 EDO 5(C2 H6 O2) FORMUL 8 ACT C2 H3 O2 1- FORMUL 9 SO4 2(O4 S 2-) FORMUL 11 HOH *119(H2 O) HELIX 1 1 HIS A 14 MSE A 28 1 15 HELIX 2 2 ASP A 42 LEU A 48 1 7 HELIX 3 3 ALA A 52 ALA A 59 1 8 HELIX 4 4 SER A 64 VAL A 69 1 6 HELIX 5 5 LEU A 82 GLN A 86 5 5 HELIX 6 6 GLU A 91 TYR A 102 1 12 HELIX 7 7 THR A 118 LYS A 124 1 7 HELIX 8 8 ASN A 141 LEU A 167 1 27 HELIX 9 9 THR A 176 LEU A 194 1 19 HELIX 10 10 GLN A 200 LYS A 214 1 15 HELIX 11 11 GLU A 216 LYS A 238 1 23 HELIX 12 12 MSE B 1 GLU B 3 5 3 HELIX 13 13 HIS B 14 MSE B 28 1 15 HELIX 14 14 ASP B 42 ALA B 50 1 9 HELIX 15 15 ALA B 52 ASN B 58 1 7 HELIX 16 16 SER B 64 VAL B 69 1 6 HELIX 17 17 LEU B 82 GLN B 86 5 5 HELIX 18 18 GLU B 91 TYR B 102 1 12 HELIX 19 19 THR B 118 LEU B 123 1 6 HELIX 20 20 ASN B 141 ASN B 162 1 22 HELIX 21 21 THR B 176 LEU B 194 1 19 HELIX 22 22 GLN B 200 LYS B 214 1 15 HELIX 23 23 GLU B 216 LEU B 236 1 21 SHEET 1 A 7 ARG A 60 VAL A 62 0 SHEET 2 A 7 GLN A 32 VAL A 36 1 N LEU A 35 O VAL A 62 SHEET 3 A 7 ILE A 5 ILE A 10 1 N ILE A 7 O GLN A 32 SHEET 4 A 7 ILE A 106 PHE A 110 1 O ILE A 106 N ARG A 6 SHEET 5 A 7 LEU A 74 THR A 78 1 N ILE A 76 O VAL A 109 SHEET 6 A 7 TYR A 127 LEU A 129 1 O LEU A 129 N GLY A 77 SHEET 7 A 7 LEU A 89 ILE A 90 1 N ILE A 90 O HIS A 128 SHEET 1 B 7 ARG B 60 VAL B 62 0 SHEET 2 B 7 GLN B 32 VAL B 36 1 N LEU B 35 O ARG B 60 SHEET 3 B 7 ILE B 5 ILE B 10 1 N ILE B 7 O GLN B 32 SHEET 4 B 7 ILE B 106 PHE B 110 1 O ILE B 108 N VAL B 8 SHEET 5 B 7 LEU B 74 THR B 78 1 N ILE B 76 O VAL B 109 SHEET 6 B 7 TYR B 127 LEU B 129 1 O LEU B 129 N GLY B 77 SHEET 7 B 7 LEU B 89 ILE B 90 1 N ILE B 90 O HIS B 128 LINK C ALA A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N LEU A 2 1555 1555 1.34 LINK C ALA A 24 N MSE A 25 1555 1555 1.32 LINK C MSE A 25 N LYS A 26 1555 1555 1.33 LINK C THR A 27 N MSE A 28 1555 1555 1.34 LINK C MSE A 28 N GLY A 29 1555 1555 1.32 LINK C ALA A 143 N MSE A 144 1555 1555 1.33 LINK C MSE A 144 N ALA A 145 1555 1555 1.34 LINK C ARG A 154 N MSE A 155 1555 1555 1.34 LINK C MSE A 155 N ALA A 156 1555 1555 1.34 LINK C VAL A 202 N MSE A 203 1555 1555 1.33 LINK C MSE A 203 N ARG A 204 1555 1555 1.34 LINK C GLY A 225 N MSE A 226 1555 1555 1.33 LINK C MSE A 226 N LEU A 227 1555 1555 1.32 LINK C MSE B 1 N LEU B 2 1555 1555 1.33 LINK C ALA B 24 N MSE B 25 1555 1555 1.32 LINK C MSE B 25 N LYS B 26 1555 1555 1.33 LINK C THR B 27 N MSE B 28 1555 1555 1.33 LINK C MSE B 28 N GLY B 29 1555 1555 1.33 LINK C ALA B 143 N MSE B 144 1555 1555 1.33 LINK C MSE B 144 N ALA B 145 1555 1555 1.33 LINK C ARG B 154 N MSE B 155 1555 1555 1.34 LINK C MSE B 155 N ALA B 156 1555 1555 1.34 LINK C VAL B 202 N MSE B 203 1555 1555 1.33 LINK C MSE B 203 N ARG B 204 1555 1555 1.33 LINK C GLY B 225 N MSE B 226 1555 1555 1.33 LINK C MSE B 226 N LEU B 227 1555 1555 1.33 SITE 1 AC1 4 THR A 78 GLY A 111 LEU A 140 EDO A 243 SITE 1 AC2 5 SER A 79 LEU A 129 ASN A 130 ILE A 131 SITE 2 AC2 5 EDO A 242 SITE 1 AC3 5 SER B 79 ASN B 130 ILE B 131 LEU B 140 SITE 2 AC3 5 SO4 B 247 SITE 1 AC4 4 SER B 73 ARG B 83 HIS B 84 HIS B 126 SITE 1 AC5 1 ASN B 141 SITE 1 AC6 5 ASN B 130 ILE B 131 PRO B 132 ALA B 133 SITE 2 AC6 5 PRO B 135 SITE 1 AC7 6 ARG A 23 HIS B 14 ASN B 17 GLU B 113 SITE 2 AC7 6 ARG B 114 ASN B 141 SITE 1 AC8 4 ARG B 112 LEU B 140 LEU B 142 EDO B 242 CRYST1 48.167 94.392 124.111 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020761 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010594 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008057 0.00000