HEADER SIGNALING PROTEIN 07-AUG-09 3ILZ
TITLE STRUCTURE OF TR-ALFA BOUND TO SELECTIVE THYROMIMETIC GC-1 IN P212121
TITLE 2 SPACE GROUP
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: THYROID HORMONE RECEPTOR, ALPHA ISOFORM 1 VARIANT;
COMPND 3 CHAIN: A;
COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: NR1A1;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562;
SOURCE 8 EXPRESSION_SYSTEM_STRAIN: B834;
SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A
KEYWDS NUCLEAR RECEPTOR, SIGNALING PROTEIN
EXPDTA X-RAY DIFFRACTION
AUTHOR R.APARICIO,L.POLIKARPOV,L.BLEICHER
REVDAT 3 16-OCT-24 3ILZ 1 REMARK
REVDAT 2 06-SEP-23 3ILZ 1 REMARK SEQADV LINK
REVDAT 1 28-APR-10 3ILZ 0
JRNL AUTH L.BLEICHER,R.APARICIO,F.M.NUNES,L.MARTINEZ,S.M.GOMES DIAS,
JRNL AUTH 2 A.C.FIGUEIRA,M.A.SANTOS,W.H.VENTURELLI,R.DA SILVA,
JRNL AUTH 3 P.M.DONATE,F.A.NEVES,L.A.SIMEONI,J.D.BAXTER,P.WEBB,M.S.SKAF,
JRNL AUTH 4 I.POLIKARPOV
JRNL TITL STRUCTURAL BASIS OF GC-1 SELECTIVITY FOR THYROID HORMONE
JRNL TITL 2 RECEPTOR ISOFORMS.
JRNL REF BMC STRUCT.BIOL. V. 8 8 2008
JRNL REFN ESSN 1472-6807
JRNL PMID 18237438
JRNL DOI 10.1186/1472-6807-8-8
REMARK 2
REMARK 2 RESOLUTION. 1.85 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : REFMAC 5.1.24
REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,
REMARK 3 : NICHOLLS,WINN,LONG,VAGIN
REMARK 3
REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.47
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0
REMARK 3 NUMBER OF REFLECTIONS : 45966
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.152
REMARK 3 R VALUE (WORKING SET) : 0.150
REMARK 3 FREE R VALUE : 0.188
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000
REMARK 3 FREE R VALUE TEST SET COUNT : 2172
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 20
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90
REMARK 3 REFLECTION IN BIN (WORKING SET) : 2964
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL
REMARK 3 BIN R VALUE (WORKING SET) : 0.2540
REMARK 3 BIN FREE R VALUE SET COUNT : 150
REMARK 3 BIN FREE R VALUE : 0.3060
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 2136
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 24
REMARK 3 SOLVENT ATOMS : 477
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.42
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : 0.07000
REMARK 3 B22 (A**2) : -0.36000
REMARK 3 B33 (A**2) : 0.29000
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED OVERALL COORDINATE ERROR.
REMARK 3 ESU BASED ON R VALUE (A): 0.083
REMARK 3 ESU BASED ON FREE R VALUE (A): 0.090
REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.054
REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.763
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.972
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.957
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT
REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2222 ; 0.037 ; 0.021
REMARK 3 BOND LENGTHS OTHERS (A): 2060 ; 0.013 ; 0.020
REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3007 ; 3.078 ; 1.992
REMARK 3 BOND ANGLES OTHERS (DEGREES): 4809 ; 3.047 ; 3.000
REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 263 ; 7.429 ; 5.000
REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL
REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL
REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL
REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 337 ; 0.171 ; 0.200
REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2391 ; 0.026 ; 0.020
REMARK 3 GENERAL PLANES OTHERS (A): 419 ; 0.039 ; 0.020
REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 624 ; 0.274 ; 0.200
REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2496 ; 0.273 ; 0.200
REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION OTHERS (A): 1244 ; 0.135 ; 0.200
REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 376 ; 0.275 ; 0.200
REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 15 ; 0.101 ; 0.200
REMARK 3 SYMMETRY VDW OTHERS (A): 73 ; 0.253 ; 0.200
REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 39 ; 0.251 ; 0.200
REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1330 ; 1.719 ; 1.500
REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2177 ; 2.813 ; 2.000
REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 892 ; 4.262 ; 3.000
REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 830 ; 6.155 ; 4.500
REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 NCS RESTRAINTS STATISTICS
REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 3
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 145 A 156
REMARK 3 ORIGIN FOR THE GROUP (A): 11.7640 1.8070 53.2590
REMARK 3 T TENSOR
REMARK 3 T11: 0.1653 T22: 0.1716
REMARK 3 T33: 0.1493 T12: -0.0020
REMARK 3 T13: 0.0369 T23: -0.0022
REMARK 3 L TENSOR
REMARK 3 L11: 15.5356 L22: 1.9318
REMARK 3 L33: 12.7321 L12: -2.8852
REMARK 3 L13: -5.7730 L23: 2.6542
REMARK 3 S TENSOR
REMARK 3 S11: -0.4226 S12: 1.0423 S13: -0.0974
REMARK 3 S21: 0.3068 S22: 0.2187 S23: 0.1847
REMARK 3 S31: 0.4183 S32: -0.1105 S33: 0.2039
REMARK 3
REMARK 3 TLS GROUP : 2
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 157 A 410
REMARK 3 ORIGIN FOR THE GROUP (A): 27.7750 30.0920 35.2440
REMARK 3 T TENSOR
REMARK 3 T11: 0.0112 T22: 0.0407
REMARK 3 T33: 0.0284 T12: 0.0115
REMARK 3 T13: -0.0023 T23: 0.0051
REMARK 3 L TENSOR
REMARK 3 L11: 0.8673 L22: 1.0774
REMARK 3 L33: 0.9719 L12: 0.1832
REMARK 3 L13: -0.3200 L23: -0.5351
REMARK 3 S TENSOR
REMARK 3 S11: -0.0154 S12: 0.0508 S13: 0.1153
REMARK 3 S21: -0.0045 S22: 0.0383 S23: 0.0775
REMARK 3 S31: -0.0631 S32: -0.0705 S33: -0.0229
REMARK 3
REMARK 3 TLS GROUP : 3
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 1 A 1
REMARK 3 ORIGIN FOR THE GROUP (A): 27.7580 38.2900 31.8240
REMARK 3 T TENSOR
REMARK 3 T11: 0.1780 T22: 0.1733
REMARK 3 T33: 0.1776 T12: -0.0036
REMARK 3 T13: -0.0070 T23: 0.0115
REMARK 3 L TENSOR
REMARK 3 L11: -4.7290 L22: -0.1656
REMARK 3 L33: 7.8570 L12: 0.9619
REMARK 3 L13: -0.0246 L23: -8.7378
REMARK 3 S TENSOR
REMARK 3 S11: 0.4586 S12: 0.4514 S13: 0.7844
REMARK 3 S21: 0.1362 S22: 0.0357 S23: 0.3880
REMARK 3 S31: -0.6465 S32: -0.5489 S33: -0.4944
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : BABINET MODEL WITH MASK
REMARK 3 PARAMETERS FOR MASK CALCULATION
REMARK 3 VDW PROBE RADIUS : 1.40
REMARK 3 ION PROBE RADIUS : 0.80
REMARK 3 SHRINKAGE RADIUS : 0.80
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING
REMARK 3 POSITIONS
REMARK 4
REMARK 4 3ILZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-APR-10.
REMARK 100 THE DEPOSITION ID IS D_1000054577.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 01-JAN-04
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 7.2
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : N
REMARK 200 RADIATION SOURCE : ROTATING ANODE
REMARK 200 BEAMLINE : NULL
REMARK 200 X-RAY GENERATOR MODEL : RIGAKU ULTRAX 18
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418
REMARK 200 MONOCHROMATOR : OSMIC
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : IMAGE PLATE
REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM
REMARK 200 DATA SCALING SOFTWARE : SCALA
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47773
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850
REMARK 200 RESOLUTION RANGE LOW (A) : 31.470
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7
REMARK 200 DATA REDUNDANCY : 8.200
REMARK 200 R MERGE (I) : 0.05900
REMARK 200 R SYM (I) : 0.05900
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.8000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90
REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9
REMARK 200 DATA REDUNDANCY IN SHELL : 7.80
REMARK 200 R MERGE FOR SHELL (I) : 0.38300
REMARK 200 R SYM FOR SHELL (I) : 0.38300
REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: AMORE
REMARK 200 STARTING MODEL: 1BSX
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 69.43
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.02
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0M NACAC 0.1M NAH3OAC, PH 7.2, VAPOR
REMARK 280 DIFFUSION, TEMPERATURE 291K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X+1/2,-Y,Z+1/2
REMARK 290 3555 -X,Y+1/2,-Z+1/2
REMARK 290 4555 X+1/2,-Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.95700
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.44300
REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.17550
REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.44300
REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.95700
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.17550
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 MET A 388 N
REMARK 475
REMARK 475 ZERO OCCUPANCY RESIDUES
REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY.
REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT
REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME;
REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE)
REMARK 475 M RES C SSEQI
REMARK 475 SER A 183
REMARK 475 HIS A 184
REMARK 480
REMARK 480 ZERO OCCUPANCY ATOM
REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO
REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS
REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME;
REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 480 M RES C SSEQI ATOMS
REMARK 480 GLY A 182 C O
REMARK 480 GLN A 187 CB CG CD OE1 NE2
REMARK 480 ARG A 189 CZ NH1 NH2
REMARK 480 LYS A 190 CE NZ
REMARK 480 LYS A 220 CD CE NZ
REMARK 480 GLU A 285 CD OE1 OE2
REMARK 480 LYS A 304 CD CE NZ
REMARK 480 GLN A 408 CG CD OE1 NE2
REMARK 480 GLU A 409 CD OE1 OE2
REMARK 480 VAL A 410 OXT
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375
REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.
REMARK 500
REMARK 500 DISTANCE CUTOFF:
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE
REMARK 500 O HOH A 460 O HOH A 705 4456 2.16
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 SER A 183 -39.52 -131.16
REMARK 500 ARG A 188 -92.81 -58.94
REMARK 500 ARG A 189 -154.83 -84.25
REMARK 500 GLU A 279 -26.86 -145.54
REMARK 500 CAS A 334 57.16 -90.54
REMARK 500 ASP A 407 78.27 71.57
REMARK 500 GLU A 409 -37.94 179.01
REMARK 500
REMARK 500 REMARK: NULL
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE B72 A 1
DBREF 3ILZ A 148 410 UNP Q59FW3 Q59FW3_HUMAN 135 397
SEQADV 3ILZ GLY A 144 UNP Q59FW3 EXPRESSION TAG
SEQADV 3ILZ SER A 145 UNP Q59FW3 EXPRESSION TAG
SEQADV 3ILZ HIS A 146 UNP Q59FW3 EXPRESSION TAG
SEQADV 3ILZ MET A 147 UNP Q59FW3 EXPRESSION TAG
SEQRES 1 A 267 GLY SER HIS MET GLU GLU MET ILE ARG SER LEU GLN GLN
SEQRES 2 A 267 ARG PRO GLU PRO THR PRO GLU GLU TRP ASP LEU ILE HIS
SEQRES 3 A 267 ILE ALA THR GLU ALA HIS ARG SER THR ASN ALA GLN GLY
SEQRES 4 A 267 SER HIS TRP LYS GLN ARG ARG LYS PHE LEU PRO ASP ASP
SEQRES 5 A 267 ILE GLY GLN SER PRO ILE VAL SER MET PRO ASP GLY ASP
SEQRES 6 A 267 LYS VAL ASP LEU GLU ALA PHE SER GLU PHE THR LYS ILE
SEQRES 7 A 267 ILE THR PRO ALA ILE THR ARG VAL VAL ASP PHE ALA LYS
SEQRES 8 A 267 LYS LEU PRO MET PHE SER GLU LEU PRO CAS GLU ASP GLN
SEQRES 9 A 267 ILE ILE LEU LEU LYS GLY CYS CYS MET GLU ILE MET SER
SEQRES 10 A 267 LEU ARG ALA ALA VAL ARG TYR ASP PRO GLU SER ASP THR
SEQRES 11 A 267 LEU THR LEU SER GLY GLU MET ALA VAL LYS ARG GLU GLN
SEQRES 12 A 267 LEU LYS ASN GLY GLY LEU GLY VAL VAL SER ASP ALA ILE
SEQRES 13 A 267 PHE GLU LEU GLY LYS SER LEU SER ALA PHE ASN LEU ASP
SEQRES 14 A 267 ASP THR GLU VAL ALA LEU LEU GLN ALA VAL LEU LEU MET
SEQRES 15 A 267 SER THR ASP ARG SER GLY LEU LEU CAS VAL ASP LYS ILE
SEQRES 16 A 267 GLU LYS SER GLN GLU ALA TYR LEU LEU ALA PHE GLU HIS
SEQRES 17 A 267 TYR VAL ASN HIS ARG LYS HIS ASN ILE PRO HIS PHE TRP
SEQRES 18 A 267 PRO LYS LEU LEU MET LYS VAL THR ASP LEU ARG MET ILE
SEQRES 19 A 267 GLY ALA CAS HIS ALA SER ARG PHE LEU HIS MET LYS VAL
SEQRES 20 A 267 GLU CAS PRO THR GLU LEU PHE PRO PRO LEU PHE LEU GLU
SEQRES 21 A 267 VAL PHE GLU ASP GLN GLU VAL
MODRES 3ILZ CAS A 244 CYS S-(DIMETHYLARSENIC)CYSTEINE
MODRES 3ILZ CAS A 334 CYS S-(DIMETHYLARSENIC)CYSTEINE
MODRES 3ILZ CAS A 380 CYS S-(DIMETHYLARSENIC)CYSTEINE
MODRES 3ILZ CAS A 392 CYS S-(DIMETHYLARSENIC)CYSTEINE
HET CAS A 244 9
HET CAS A 334 9
HET CAS A 380 9
HET CAS A 392 9
HET B72 A 1 26
HETNAM CAS S-(DIMETHYLARSENIC)CYSTEINE
HETNAM B72 {4-[4-HYDROXY-3-(1-METHYLETHYL)BENZYL]-3,5-
HETNAM 2 B72 DIMETHYLPHENOXY}ACETIC ACID
FORMUL 1 CAS 4(C5 H12 AS N O2 S)
FORMUL 2 B72 C20 H24 O4
FORMUL 3 HOH *477(H2 O)
HELIX 1 1 SER A 145 ARG A 152 1 8
HELIX 2 2 THR A 161 SER A 177 1 17
HELIX 3 3 ASP A 211 LYS A 235 1 25
HELIX 4 4 LEU A 236 GLU A 241 1 6
HELIX 5 5 PRO A 243 VAL A 265 1 23
HELIX 6 6 LYS A 283 GLY A 290 1 8
HELIX 7 7 GLY A 293 SER A 307 1 15
HELIX 8 8 ALA A 308 ASN A 310 5 3
HELIX 9 9 ASP A 312 MET A 325 1 14
HELIX 10 10 CAS A 334 LYS A 357 1 24
HELIX 11 11 HIS A 362 HIS A 387 1 26
HELIX 12 12 MET A 388 CAS A 392 1 5
HELIX 13 13 PRO A 393 PHE A 397 5 5
HELIX 14 14 PRO A 398 PHE A 405 1 8
SHEET 1 A 3 LYS A 190 PHE A 191 0
SHEET 2 A 3 MET A 280 VAL A 282 1 O ALA A 281 N LYS A 190
SHEET 3 A 3 LEU A 274 LEU A 276 -1 N LEU A 276 O MET A 280
LINK C PRO A 243 N CAS A 244 1555 1555 1.33
LINK C CAS A 244 N GLU A 245 1555 1555 1.32
LINK C LEU A 333 N CAS A 334 1555 1555 1.33
LINK C CAS A 334 N VAL A 335 1555 1555 1.32
LINK C ALA A 379 N CAS A 380 1555 1555 1.33
LINK C CAS A 380 N HIS A 381 1555 1555 1.33
LINK C GLU A 391 N CAS A 392 1555 1555 1.33
LINK C CAS A 392 N PRO A 393 1555 1555 1.35
SITE 1 AC1 19 HOH A 8 HOH A 28 HOH A 124 PHE A 218
SITE 2 AC1 19 ILE A 222 ALA A 225 ARG A 228 MET A 256
SITE 3 AC1 19 MET A 259 ARG A 262 ARG A 266 LEU A 276
SITE 4 AC1 19 SER A 277 GLY A 278 GLY A 290 GLY A 291
SITE 5 AC1 19 HIS A 381 PHE A 401 HOH A 672
CRYST1 59.914 80.351 102.886 90.00 90.00 90.00 P 21 21 21 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.016691 0.000000 0.000000 0.00000
SCALE2 0.000000 0.012445 0.000000 0.00000
SCALE3 0.000000 0.000000 0.009719 0.00000