data_3ING # _entry.id 3ING # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3ING pdb_00003ing 10.2210/pdb3ing/pdb RCSB RCSB054630 ? ? WWPDB D_1000054630 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 380082 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3ING _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-08-12 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of Homoserine dehydrogenase (NP_394635.1) from THERMOPLASMA ACIDOPHILUM at 1.95 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3ING _cell.length_a 69.821 _cell.length_b 92.113 _cell.length_c 120.788 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3ING _symmetry.Int_Tables_number 20 _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Homoserine dehydrogenase' 36125.180 1 ? ? ? ? 2 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 3 non-polymer syn 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 745.421 1 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 6 ? ? ? ? 5 water nat water 18.015 214 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)KEIRIIL(MSE)GTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRISDRAF SGPEDL(MSE)GEAADLLVDCTPASRDGVREYSLYR(MSE)AFESG(MSE)NVVTANKSGLANKWHDI(MSE)DSANQNS KYIRYEATVAGGVPLFSVLDYSILPSKVKRFRGIVSSTINYVIRN(MSE)ANGRSLRDVVDDAIKKGIAESNPQDDLNGL DAARKSVILVNHIFGTEYTLNDVEYSGVDERSYNANDRLVTEVYVDDRRPVAVSRIISLNKDDFL(MSE)SIG(MSE)DG LGYQIETDSNGTVNVSDIYDGPYETAGAVVNDILLLSKVQK ; _entity_poly.pdbx_seq_one_letter_code_can ;GMKEIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRISDRAFSGPEDLMG EAADLLVDCTPASRDGVREYSLYRMAFESGMNVVTANKSGLANKWHDIMDSANQNSKYIRYEATVAGGVPLFSVLDYSIL PSKVKRFRGIVSSTINYVIRNMANGRSLRDVVDDAIKKGIAESNPQDDLNGLDAARKSVILVNHIFGTEYTLNDVEYSGV DERSYNANDRLVTEVYVDDRRPVAVSRIISLNKDDFLMSIGMDGLGYQIETDSNGTVNVSDIYDGPYETAGAVVNDILLL SKVQK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 380082 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 LYS n 1 4 GLU n 1 5 ILE n 1 6 ARG n 1 7 ILE n 1 8 ILE n 1 9 LEU n 1 10 MSE n 1 11 GLY n 1 12 THR n 1 13 GLY n 1 14 ASN n 1 15 VAL n 1 16 GLY n 1 17 LEU n 1 18 ASN n 1 19 VAL n 1 20 LEU n 1 21 ARG n 1 22 ILE n 1 23 ILE n 1 24 ASP n 1 25 ALA n 1 26 SER n 1 27 ASN n 1 28 ARG n 1 29 ARG n 1 30 ARG n 1 31 SER n 1 32 ALA n 1 33 PHE n 1 34 SER n 1 35 ILE n 1 36 LYS n 1 37 VAL n 1 38 VAL n 1 39 GLY n 1 40 VAL n 1 41 SER n 1 42 ASP n 1 43 SER n 1 44 ARG n 1 45 SER n 1 46 TYR n 1 47 ALA n 1 48 SER n 1 49 GLY n 1 50 ARG n 1 51 ASN n 1 52 LEU n 1 53 ASP n 1 54 ILE n 1 55 SER n 1 56 SER n 1 57 ILE n 1 58 ILE n 1 59 SER n 1 60 ASN n 1 61 LYS n 1 62 GLU n 1 63 LYS n 1 64 THR n 1 65 GLY n 1 66 ARG n 1 67 ILE n 1 68 SER n 1 69 ASP n 1 70 ARG n 1 71 ALA n 1 72 PHE n 1 73 SER n 1 74 GLY n 1 75 PRO n 1 76 GLU n 1 77 ASP n 1 78 LEU n 1 79 MSE n 1 80 GLY n 1 81 GLU n 1 82 ALA n 1 83 ALA n 1 84 ASP n 1 85 LEU n 1 86 LEU n 1 87 VAL n 1 88 ASP n 1 89 CYS n 1 90 THR n 1 91 PRO n 1 92 ALA n 1 93 SER n 1 94 ARG n 1 95 ASP n 1 96 GLY n 1 97 VAL n 1 98 ARG n 1 99 GLU n 1 100 TYR n 1 101 SER n 1 102 LEU n 1 103 TYR n 1 104 ARG n 1 105 MSE n 1 106 ALA n 1 107 PHE n 1 108 GLU n 1 109 SER n 1 110 GLY n 1 111 MSE n 1 112 ASN n 1 113 VAL n 1 114 VAL n 1 115 THR n 1 116 ALA n 1 117 ASN n 1 118 LYS n 1 119 SER n 1 120 GLY n 1 121 LEU n 1 122 ALA n 1 123 ASN n 1 124 LYS n 1 125 TRP n 1 126 HIS n 1 127 ASP n 1 128 ILE n 1 129 MSE n 1 130 ASP n 1 131 SER n 1 132 ALA n 1 133 ASN n 1 134 GLN n 1 135 ASN n 1 136 SER n 1 137 LYS n 1 138 TYR n 1 139 ILE n 1 140 ARG n 1 141 TYR n 1 142 GLU n 1 143 ALA n 1 144 THR n 1 145 VAL n 1 146 ALA n 1 147 GLY n 1 148 GLY n 1 149 VAL n 1 150 PRO n 1 151 LEU n 1 152 PHE n 1 153 SER n 1 154 VAL n 1 155 LEU n 1 156 ASP n 1 157 TYR n 1 158 SER n 1 159 ILE n 1 160 LEU n 1 161 PRO n 1 162 SER n 1 163 LYS n 1 164 VAL n 1 165 LYS n 1 166 ARG n 1 167 PHE n 1 168 ARG n 1 169 GLY n 1 170 ILE n 1 171 VAL n 1 172 SER n 1 173 SER n 1 174 THR n 1 175 ILE n 1 176 ASN n 1 177 TYR n 1 178 VAL n 1 179 ILE n 1 180 ARG n 1 181 ASN n 1 182 MSE n 1 183 ALA n 1 184 ASN n 1 185 GLY n 1 186 ARG n 1 187 SER n 1 188 LEU n 1 189 ARG n 1 190 ASP n 1 191 VAL n 1 192 VAL n 1 193 ASP n 1 194 ASP n 1 195 ALA n 1 196 ILE n 1 197 LYS n 1 198 LYS n 1 199 GLY n 1 200 ILE n 1 201 ALA n 1 202 GLU n 1 203 SER n 1 204 ASN n 1 205 PRO n 1 206 GLN n 1 207 ASP n 1 208 ASP n 1 209 LEU n 1 210 ASN n 1 211 GLY n 1 212 LEU n 1 213 ASP n 1 214 ALA n 1 215 ALA n 1 216 ARG n 1 217 LYS n 1 218 SER n 1 219 VAL n 1 220 ILE n 1 221 LEU n 1 222 VAL n 1 223 ASN n 1 224 HIS n 1 225 ILE n 1 226 PHE n 1 227 GLY n 1 228 THR n 1 229 GLU n 1 230 TYR n 1 231 THR n 1 232 LEU n 1 233 ASN n 1 234 ASP n 1 235 VAL n 1 236 GLU n 1 237 TYR n 1 238 SER n 1 239 GLY n 1 240 VAL n 1 241 ASP n 1 242 GLU n 1 243 ARG n 1 244 SER n 1 245 TYR n 1 246 ASN n 1 247 ALA n 1 248 ASN n 1 249 ASP n 1 250 ARG n 1 251 LEU n 1 252 VAL n 1 253 THR n 1 254 GLU n 1 255 VAL n 1 256 TYR n 1 257 VAL n 1 258 ASP n 1 259 ASP n 1 260 ARG n 1 261 ARG n 1 262 PRO n 1 263 VAL n 1 264 ALA n 1 265 VAL n 1 266 SER n 1 267 ARG n 1 268 ILE n 1 269 ILE n 1 270 SER n 1 271 LEU n 1 272 ASN n 1 273 LYS n 1 274 ASP n 1 275 ASP n 1 276 PHE n 1 277 LEU n 1 278 MSE n 1 279 SER n 1 280 ILE n 1 281 GLY n 1 282 MSE n 1 283 ASP n 1 284 GLY n 1 285 LEU n 1 286 GLY n 1 287 TYR n 1 288 GLN n 1 289 ILE n 1 290 GLU n 1 291 THR n 1 292 ASP n 1 293 SER n 1 294 ASN n 1 295 GLY n 1 296 THR n 1 297 VAL n 1 298 ASN n 1 299 VAL n 1 300 SER n 1 301 ASP n 1 302 ILE n 1 303 TYR n 1 304 ASP n 1 305 GLY n 1 306 PRO n 1 307 TYR n 1 308 GLU n 1 309 THR n 1 310 ALA n 1 311 GLY n 1 312 ALA n 1 313 VAL n 1 314 VAL n 1 315 ASN n 1 316 ASP n 1 317 ILE n 1 318 LEU n 1 319 LEU n 1 320 LEU n 1 321 SER n 1 322 LYS n 1 323 VAL n 1 324 GLN n 1 325 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name Archaea _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'NP_394635.1, Ta1179' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermoplasma acidophilum' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2303 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9HIZ7_THEAC _struct_ref.pdbx_db_accession Q9HIZ7 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MKEIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRISDRAFSGPEDLMGE AADLLVDCTPASRDGVREYSLYRMAFESGMNVVTANKSGLANKWHDIMDSANQNSKYIRYEATVAGGVPLFSVLDYSILP SKVKRFRGIVSSTINYVIRNMANGRSLRDVVDDAIKKGIAESNPQDDLNGLDAARKSVILVNHIFGTEYTLNDVEYSGVD ERSYNANDRLVTEVYVDDRRPVAVSRIISLNKDDFLMSIGMDGLGYQIETDSNGTVNVSDIYDGPYETAGAVVNDILLLS KVQK ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3ING _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 325 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9HIZ7 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 324 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 324 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3ING _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q9HIZ7 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 NDP non-polymer . 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' ? 'C21 H30 N7 O17 P3' 745.421 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3ING # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.69 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 54.24 _exptl_crystal.description 'DATA WERE SCALED USING XSCALE WITH FRIEDEL PAIRS KEPT AS SEPARATE WHEN COMPUTING R-SYM, COMPLETENESS AND ' _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 5.14 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details ;49.0000% 2-propanol, 5.0000% polyethylene glycol 1000, 0.1M citric acid pH 5.14, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 293K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat collimating mirror, toroid focusing mirror' _diffrn_detector.pdbx_collection_date 2009-03-19 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91162 1.0 2 0.97927 1.0 3 0.97908 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL9-2 _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_wavelength_list 0.91162,0.97927,0.97908 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3ING _reflns.d_resolution_high 1.95 _reflns.d_resolution_low 28.105 _reflns.number_obs 28686 _reflns.pdbx_Rmerge_I_obs 0.079 _reflns.pdbx_netI_over_sigmaI 8.450 _reflns.percent_possible_obs 98.600 _reflns.B_iso_Wilson_estimate 20.319 _reflns.observed_criterion_sigma_I -3.00 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy 3.65 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.95 2.02 10188 ? 5339 0.499 1.6 ? ? ? ? ? 97.20 1 1 2.02 2.10 10291 ? 5375 0.349 2.2 ? ? ? ? ? 98.80 2 1 2.10 2.20 11021 ? 5723 0.261 3.0 ? ? ? ? ? 99.00 3 1 2.20 2.31 9929 ? 5147 0.212 3.7 ? ? ? ? ? 98.90 4 1 2.31 2.46 10766 ? 5592 0.173 4.4 ? ? ? ? ? 99.10 5 1 2.46 2.65 10510 ? 5427 0.132 5.8 ? ? ? ? ? 98.90 6 1 2.65 2.91 10325 ? 5308 0.095 8.0 ? ? ? ? ? 99.00 7 1 2.91 3.33 10490 ? 5400 0.062 11.6 ? ? ? ? ? 98.50 8 1 3.33 4.19 10548 ? 5407 0.036 19.3 ? ? ? ? ? 98.30 9 1 4.19 28.105 10569 ? 5418 0.026 24.8 ? ? ? ? ? 97.80 10 1 # _refine.entry_id 3ING _refine.ls_d_res_high 1.950 _refine.ls_d_res_low 28.105 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.600 _refine.ls_number_reflns_obs 28657 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS OTHER REFINEMENT REMARKS: 1.HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2.ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. 3.A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4.DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE (NDP) AND SODIUM (NA), MOST LIKELY BOUND DURING PROTEIN EXPRESSION WERE MODELED INTO THE STRUCTURE. THE SODIUM WAS ASSIGNED BASED ON THE COORDINATION ENVIRONMENT, AGREEMENT WITH ELECTRON DENSITY AND IT STRUCTURAL HOMOLOG(PDB ID 1EBU). ETHYLENE GLYCOL (EDO) USED AS CRYOPROTECTANT WAS MODELED INTO THE STRUCTURE. 5.THE RAMACHANDRAN OUTLIER (GLY146) IS SUPPORTED BY ELECTRON DENSITY. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.154 _refine.ls_R_factor_R_work 0.152 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.193 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 1435 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 28.208 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.050 _refine.aniso_B[2][2] 0.990 _refine.aniso_B[3][3] -1.040 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.966 _refine.correlation_coeff_Fo_to_Fc_free 0.944 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.125 _refine.pdbx_overall_ESU_R_Free 0.122 _refine.overall_SU_ML 0.083 _refine.overall_SU_B 5.481 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 81.83 _refine.B_iso_min 6.37 _refine.occupancy_max 1.00 _refine.occupancy_min 0.20 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2405 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 73 _refine_hist.number_atoms_solvent 214 _refine_hist.number_atoms_total 2692 _refine_hist.d_res_high 1.950 _refine_hist.d_res_low 28.105 # loop_ _refine_ls_restr.type _refine_ls_restr.pdbx_refine_id _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 'X-RAY DIFFRACTION' 2589 0.018 0.022 ? ? r_bond_other_d 'X-RAY DIFFRACTION' 1704 0.002 0.020 ? ? r_angle_refined_deg 'X-RAY DIFFRACTION' 3517 1.623 1.989 ? ? r_angle_other_deg 'X-RAY DIFFRACTION' 4163 1.120 3.000 ? ? r_dihedral_angle_1_deg 'X-RAY DIFFRACTION' 335 5.140 5.000 ? ? r_dihedral_angle_2_deg 'X-RAY DIFFRACTION' 110 38.700 24.455 ? ? r_dihedral_angle_3_deg 'X-RAY DIFFRACTION' 428 11.692 15.000 ? ? r_dihedral_angle_4_deg 'X-RAY DIFFRACTION' 19 15.330 15.000 ? ? r_chiral_restr 'X-RAY DIFFRACTION' 409 0.078 0.200 ? ? r_gen_planes_refined 'X-RAY DIFFRACTION' 2916 0.007 0.020 ? ? r_gen_planes_other 'X-RAY DIFFRACTION' 499 0.002 0.020 ? ? r_nbd_refined 'X-RAY DIFFRACTION' 536 0.242 0.300 ? ? r_nbd_other 'X-RAY DIFFRACTION' 1963 0.197 0.300 ? ? r_nbtor_refined 'X-RAY DIFFRACTION' 1306 0.182 0.500 ? ? r_nbtor_other 'X-RAY DIFFRACTION' 1324 0.091 0.500 ? ? r_xyhbond_nbd_refined 'X-RAY DIFFRACTION' 321 0.188 0.500 ? ? r_xyhbond_nbd_other 'X-RAY DIFFRACTION' 1 0.027 0.500 ? ? r_symmetry_vdw_refined 'X-RAY DIFFRACTION' 9 0.238 0.300 ? ? r_symmetry_vdw_other 'X-RAY DIFFRACTION' 33 0.311 0.300 ? ? r_symmetry_hbond_refined 'X-RAY DIFFRACTION' 22 0.224 0.500 ? ? r_mcbond_it 'X-RAY DIFFRACTION' 1633 1.909 3.000 ? ? r_mcbond_other 'X-RAY DIFFRACTION' 675 0.543 3.000 ? ? r_mcangle_it 'X-RAY DIFFRACTION' 2638 3.113 5.000 ? ? r_scbond_it 'X-RAY DIFFRACTION' 977 4.977 8.000 ? ? r_scangle_it 'X-RAY DIFFRACTION' 879 7.159 11.000 ? ? # _refine_ls_shell.d_res_high 1.950 _refine_ls_shell.d_res_low 2.001 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 98.210 _refine_ls_shell.number_reflns_R_work 1990 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.212 _refine_ls_shell.R_factor_R_free 0.243 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 93 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2083 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3ING _struct.title 'Crystal structure of Homoserine dehydrogenase (NP_394635.1) from THERMOPLASMA ACIDOPHILUM at 1.95 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;NP_394635.1, Homoserine dehydrogenase, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, OXIDOREDUCTASE ; _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.entry_id 3ING # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 5 ? # _struct_biol.id 1 _struct_biol.details ;ANALYTICAL SIZE EXCLUSION CHROMATOGRAPHY PROVIDES SUPPORTING EVIDENCE THAT THE DIMER IS A SIGNIFICANT OLIGOMERIZATION STATE IN SOLUTION. ; # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 13 ? ARG A 30 ? GLY A 12 ARG A 29 1 ? 18 HELX_P HELX_P2 2 ASP A 53 ? GLY A 65 ? ASP A 52 GLY A 64 1 ? 13 HELX_P HELX_P3 3 GLY A 74 ? MSE A 79 ? GLY A 73 MSE A 78 5 ? 6 HELX_P HELX_P4 4 GLY A 96 ? SER A 109 ? GLY A 95 SER A 108 1 ? 14 HELX_P HELX_P5 5 LYS A 118 ? SER A 136 ? LYS A 117 SER A 135 1 ? 19 HELX_P HELX_P6 6 TYR A 141 ? VAL A 145 ? TYR A 140 VAL A 144 5 ? 5 HELX_P HELX_P7 7 LEU A 151 ? SER A 158 ? LEU A 150 SER A 157 1 ? 8 HELX_P HELX_P8 8 SER A 172 ? ASN A 184 ? SER A 171 ASN A 183 1 ? 13 HELX_P HELX_P9 9 SER A 187 ? GLY A 199 ? SER A 186 GLY A 198 1 ? 13 HELX_P HELX_P10 10 PRO A 205 ? ASN A 210 ? PRO A 204 ASN A 209 1 ? 6 HELX_P HELX_P11 11 GLY A 211 ? GLY A 227 ? GLY A 210 GLY A 226 1 ? 17 HELX_P HELX_P12 12 THR A 231 ? VAL A 235 ? THR A 230 VAL A 234 5 ? 5 HELX_P HELX_P13 13 ASP A 275 ? ILE A 280 ? ASP A 274 ILE A 279 5 ? 6 HELX_P HELX_P14 14 GLY A 305 ? LYS A 322 ? GLY A 304 LYS A 321 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A LEU 9 C ? ? ? 1_555 A MSE 10 N ? ? A LEU 8 A MSE 9 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale2 covale both ? A MSE 10 C ? ? ? 1_555 A GLY 11 N ? ? A MSE 9 A GLY 10 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale3 covale both ? A LEU 78 C ? ? ? 1_555 A MSE 79 N ? ? A LEU 77 A MSE 78 1_555 ? ? ? ? ? ? ? 1.308 ? ? covale4 covale both ? A MSE 79 C ? ? ? 1_555 A GLY 80 N ? ? A MSE 78 A GLY 79 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale5 covale both ? A ARG 104 C ? ? ? 1_555 A MSE 105 N ? ? A ARG 103 A MSE 104 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale6 covale both ? A MSE 105 C ? ? ? 1_555 A ALA 106 N ? ? A MSE 104 A ALA 105 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale7 covale both ? A GLY 110 C ? ? ? 1_555 A MSE 111 N ? ? A GLY 109 A MSE 110 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale8 covale both ? A MSE 111 C ? ? ? 1_555 A ASN 112 N ? ? A MSE 110 A ASN 111 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale9 covale both ? A ILE 128 C ? ? ? 1_555 A MSE 129 N ? ? A ILE 127 A MSE 128 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale10 covale both ? A MSE 129 C ? ? ? 1_555 A ASP 130 N ? ? A MSE 128 A ASP 129 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale11 covale both ? A ASN 181 C ? ? ? 1_555 A MSE 182 N ? ? A ASN 180 A MSE 181 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale12 covale both ? A MSE 182 C ? ? ? 1_555 A ALA 183 N ? ? A MSE 181 A ALA 182 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale13 covale both ? A LEU 277 C ? ? ? 1_555 A MSE 278 N ? ? A LEU 276 A MSE 277 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale14 covale both ? A MSE 278 C ? ? ? 1_555 A SER 279 N ? ? A MSE 277 A SER 278 1_555 ? ? ? ? ? ? ? 1.346 ? ? covale15 covale both ? A GLY 281 C ? ? ? 1_555 A MSE 282 N ? ? A GLY 280 A MSE 281 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale16 covale both ? A MSE 282 C ? ? ? 1_555 A ASP 283 N ? ? A MSE 281 A ASP 282 1_555 ? ? ? ? ? ? ? 1.331 ? ? metalc1 metalc ? ? A GLU 142 O ? ? ? 1_555 B NA . NA ? ? A GLU 141 A NA 325 1_555 ? ? ? ? ? ? ? 2.657 ? ? metalc2 metalc ? ? A GLU 142 OE2 ? ? ? 1_555 B NA . NA ? ? A GLU 141 A NA 325 1_555 ? ? ? ? ? ? ? 2.842 ? ? metalc3 metalc ? ? A VAL 145 O ? ? ? 1_555 B NA . NA ? ? A VAL 144 A NA 325 1_555 ? ? ? ? ? ? ? 2.541 ? ? metalc4 metalc ? ? A ALA 146 O ? ? ? 1_555 B NA . NA ? ? A ALA 145 A NA 325 1_555 ? ? ? ? ? ? ? 2.850 ? ? metalc5 metalc ? ? A VAL 149 O ? ? ? 1_555 B NA . NA ? ? A VAL 148 A NA 325 1_555 ? ? ? ? ? ? ? 2.595 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 46 ? SER A 48 ? TYR A 45 SER A 47 A 2 SER A 34 ? SER A 41 ? SER A 33 SER A 40 A 3 GLU A 4 ? MSE A 10 ? GLU A 3 MSE A 9 A 4 LEU A 85 ? ASP A 88 ? LEU A 84 ASP A 87 A 5 ASN A 112 ? THR A 115 ? ASN A 111 THR A 114 A 6 ILE A 139 ? ARG A 140 ? ILE A 138 ARG A 139 B 1 ARG A 261 ? SER A 270 ? ARG A 260 SER A 269 B 2 ASP A 249 ? ASP A 258 ? ASP A 248 ASP A 257 B 3 VAL A 164 ? ILE A 170 ? VAL A 163 ILE A 169 B 4 GLY A 286 ? THR A 291 ? GLY A 285 THR A 290 B 5 THR A 296 ? SER A 300 ? THR A 295 SER A 299 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ALA A 47 ? O ALA A 46 N VAL A 40 ? N VAL A 39 A 2 3 O LYS A 36 ? O LYS A 35 N ILE A 5 ? N ILE A 4 A 3 4 N MSE A 10 ? N MSE A 9 O VAL A 87 ? O VAL A 86 A 4 5 N LEU A 86 ? N LEU A 85 O VAL A 114 ? O VAL A 113 A 5 6 N THR A 115 ? N THR A 114 O ARG A 140 ? O ARG A 139 B 1 2 O VAL A 263 ? O VAL A 262 N TYR A 256 ? N TYR A 255 B 2 3 O THR A 253 ? O THR A 252 N GLY A 169 ? N GLY A 168 B 3 4 N LYS A 165 ? N LYS A 164 O GLU A 290 ? O GLU A 289 B 4 5 N ILE A 289 ? N ILE A 288 O VAL A 297 ? O VAL A 296 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NA 325 ? 5 'BINDING SITE FOR RESIDUE NA A 325' AC2 Software A NDP 326 ? 32 'BINDING SITE FOR RESIDUE NDP A 326' AC3 Software A EDO 327 ? 3 'BINDING SITE FOR RESIDUE EDO A 327' AC4 Software A EDO 328 ? 5 'BINDING SITE FOR RESIDUE EDO A 328' AC5 Software A EDO 329 ? 7 'BINDING SITE FOR RESIDUE EDO A 329' AC6 Software A EDO 330 ? 3 'BINDING SITE FOR RESIDUE EDO A 330' AC7 Software A EDO 331 ? 5 'BINDING SITE FOR RESIDUE EDO A 331' AC8 Software A EDO 332 ? 4 'BINDING SITE FOR RESIDUE EDO A 332' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 GLU A 142 ? GLU A 141 . ? 1_555 ? 2 AC1 5 VAL A 145 ? VAL A 144 . ? 1_555 ? 3 AC1 5 ALA A 146 ? ALA A 145 . ? 1_555 ? 4 AC1 5 GLY A 147 ? GLY A 146 . ? 1_555 ? 5 AC1 5 VAL A 149 ? VAL A 148 . ? 1_555 ? 6 AC2 32 GLY A 11 ? GLY A 10 . ? 1_555 ? 7 AC2 32 THR A 12 ? THR A 11 . ? 1_555 ? 8 AC2 32 GLY A 13 ? GLY A 12 . ? 1_555 ? 9 AC2 32 ASN A 14 ? ASN A 13 . ? 1_555 ? 10 AC2 32 VAL A 15 ? VAL A 14 . ? 1_555 ? 11 AC2 32 ASP A 42 ? ASP A 41 . ? 1_555 ? 12 AC2 32 SER A 43 ? SER A 42 . ? 1_555 ? 13 AC2 32 LYS A 61 ? LYS A 60 . ? 1_555 ? 14 AC2 32 CYS A 89 ? CYS A 88 . ? 1_555 ? 15 AC2 32 THR A 90 ? THR A 89 . ? 1_555 ? 16 AC2 32 PRO A 91 ? PRO A 90 . ? 1_555 ? 17 AC2 32 ALA A 116 ? ALA A 115 . ? 1_555 ? 18 AC2 32 ASN A 117 ? ASN A 116 . ? 1_555 ? 19 AC2 32 LYS A 118 ? LYS A 117 . ? 1_555 ? 20 AC2 32 ALA A 143 ? ALA A 142 . ? 1_555 ? 21 AC2 32 ARG A 189 ? ARG A 188 . ? 4_565 ? 22 AC2 32 GLY A 199 ? GLY A 198 . ? 1_555 ? 23 AC2 32 GLU A 202 ? GLU A 201 . ? 1_555 ? 24 AC2 32 SER A 203 ? SER A 202 . ? 1_555 ? 25 AC2 32 PRO A 306 ? PRO A 305 . ? 1_555 ? 26 AC2 32 THR A 309 ? THR A 308 . ? 1_555 ? 27 AC2 32 HOH J . ? HOH A 344 . ? 1_555 ? 28 AC2 32 HOH J . ? HOH A 348 . ? 1_555 ? 29 AC2 32 HOH J . ? HOH A 350 . ? 1_555 ? 30 AC2 32 HOH J . ? HOH A 373 . ? 4_565 ? 31 AC2 32 HOH J . ? HOH A 375 . ? 1_555 ? 32 AC2 32 HOH J . ? HOH A 378 . ? 4_565 ? 33 AC2 32 HOH J . ? HOH A 384 . ? 1_555 ? 34 AC2 32 HOH J . ? HOH A 404 . ? 1_555 ? 35 AC2 32 HOH J . ? HOH A 410 . ? 1_555 ? 36 AC2 32 HOH J . ? HOH A 418 . ? 1_555 ? 37 AC2 32 HOH J . ? HOH A 425 . ? 4_565 ? 38 AC3 3 ASN A 14 ? ASN A 13 . ? 1_555 ? 39 AC3 3 LYS A 197 ? LYS A 196 . ? 1_555 ? 40 AC3 3 EDO E . ? EDO A 328 . ? 4_565 ? 41 AC4 5 ARG A 189 ? ARG A 188 . ? 1_555 ? 42 AC4 5 ASP A 190 ? ASP A 189 . ? 1_555 ? 43 AC4 5 ASP A 193 ? ASP A 192 . ? 1_555 ? 44 AC4 5 EDO D . ? EDO A 327 . ? 4_565 ? 45 AC4 5 HOH J . ? HOH A 338 . ? 4_565 ? 46 AC5 7 SER A 173 ? SER A 172 . ? 1_555 ? 47 AC5 7 TYR A 177 ? TYR A 176 . ? 1_555 ? 48 AC5 7 ARG A 180 ? ARG A 179 . ? 1_555 ? 49 AC5 7 GLY A 281 ? GLY A 280 . ? 1_555 ? 50 AC5 7 MSE A 282 ? MSE A 281 . ? 1_555 ? 51 AC5 7 GLY A 284 ? GLY A 283 . ? 1_555 ? 52 AC5 7 HOH J . ? HOH A 403 . ? 1_555 ? 53 AC6 3 ASP A 156 ? ASP A 155 . ? 1_555 ? 54 AC6 3 HIS A 224 ? HIS A 223 . ? 1_555 ? 55 AC6 3 HOH J . ? HOH A 347 . ? 1_555 ? 56 AC7 5 ALA A 132 ? ALA A 131 . ? 1_555 ? 57 AC7 5 ASN A 133 ? ASN A 132 . ? 1_555 ? 58 AC7 5 SER A 136 ? SER A 135 . ? 1_555 ? 59 AC7 5 LYS A 137 ? LYS A 136 . ? 1_555 ? 60 AC7 5 TYR A 138 ? TYR A 137 . ? 1_555 ? 61 AC8 4 VAL A 164 ? VAL A 163 . ? 1_555 ? 62 AC8 4 ILE A 225 ? ILE A 224 . ? 1_555 ? 63 AC8 4 PHE A 226 ? PHE A 225 . ? 1_555 ? 64 AC8 4 HOH J . ? HOH A 385 . ? 1_555 ? # _atom_sites.entry_id 3ING _atom_sites.fract_transf_matrix[1][1] 0.014322 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010856 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008279 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N NA O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 ? ? ? A . n A 1 3 LYS 3 2 2 LYS LYS A . n A 1 4 GLU 4 3 3 GLU GLU A . n A 1 5 ILE 5 4 4 ILE ILE A . n A 1 6 ARG 6 5 5 ARG ARG A . n A 1 7 ILE 7 6 6 ILE ILE A . n A 1 8 ILE 8 7 7 ILE ILE A . n A 1 9 LEU 9 8 8 LEU LEU A . n A 1 10 MSE 10 9 9 MSE MSE A . n A 1 11 GLY 11 10 10 GLY GLY A . n A 1 12 THR 12 11 11 THR THR A . n A 1 13 GLY 13 12 12 GLY GLY A . n A 1 14 ASN 14 13 13 ASN ASN A . n A 1 15 VAL 15 14 14 VAL VAL A . n A 1 16 GLY 16 15 15 GLY GLY A . n A 1 17 LEU 17 16 16 LEU LEU A . n A 1 18 ASN 18 17 17 ASN ASN A . n A 1 19 VAL 19 18 18 VAL VAL A . n A 1 20 LEU 20 19 19 LEU LEU A . n A 1 21 ARG 21 20 20 ARG ARG A . n A 1 22 ILE 22 21 21 ILE ILE A . n A 1 23 ILE 23 22 22 ILE ILE A . n A 1 24 ASP 24 23 23 ASP ASP A . n A 1 25 ALA 25 24 24 ALA ALA A . n A 1 26 SER 26 25 25 SER SER A . n A 1 27 ASN 27 26 26 ASN ASN A . n A 1 28 ARG 28 27 27 ARG ARG A . n A 1 29 ARG 29 28 28 ARG ARG A . n A 1 30 ARG 30 29 29 ARG ARG A . n A 1 31 SER 31 30 ? ? ? A . n A 1 32 ALA 32 31 ? ? ? A . n A 1 33 PHE 33 32 32 PHE PHE A . n A 1 34 SER 34 33 33 SER SER A . n A 1 35 ILE 35 34 34 ILE ILE A . n A 1 36 LYS 36 35 35 LYS LYS A . n A 1 37 VAL 37 36 36 VAL VAL A . n A 1 38 VAL 38 37 37 VAL VAL A . n A 1 39 GLY 39 38 38 GLY GLY A . n A 1 40 VAL 40 39 39 VAL VAL A . n A 1 41 SER 41 40 40 SER SER A . n A 1 42 ASP 42 41 41 ASP ASP A . n A 1 43 SER 43 42 42 SER SER A . n A 1 44 ARG 44 43 43 ARG ARG A . n A 1 45 SER 45 44 44 SER SER A . n A 1 46 TYR 46 45 45 TYR TYR A . n A 1 47 ALA 47 46 46 ALA ALA A . n A 1 48 SER 48 47 47 SER SER A . n A 1 49 GLY 49 48 48 GLY GLY A . n A 1 50 ARG 50 49 49 ARG ARG A . n A 1 51 ASN 51 50 50 ASN ASN A . n A 1 52 LEU 52 51 51 LEU LEU A . n A 1 53 ASP 53 52 52 ASP ASP A . n A 1 54 ILE 54 53 53 ILE ILE A . n A 1 55 SER 55 54 54 SER SER A . n A 1 56 SER 56 55 55 SER SER A . n A 1 57 ILE 57 56 56 ILE ILE A . n A 1 58 ILE 58 57 57 ILE ILE A . n A 1 59 SER 59 58 58 SER SER A . n A 1 60 ASN 60 59 59 ASN ASN A . n A 1 61 LYS 61 60 60 LYS LYS A . n A 1 62 GLU 62 61 61 GLU GLU A . n A 1 63 LYS 63 62 62 LYS LYS A . n A 1 64 THR 64 63 63 THR THR A . n A 1 65 GLY 65 64 64 GLY GLY A . n A 1 66 ARG 66 65 65 ARG ARG A . n A 1 67 ILE 67 66 66 ILE ILE A . n A 1 68 SER 68 67 67 SER SER A . n A 1 69 ASP 69 68 68 ASP ASP A . n A 1 70 ARG 70 69 69 ARG ARG A . n A 1 71 ALA 71 70 70 ALA ALA A . n A 1 72 PHE 72 71 71 PHE PHE A . n A 1 73 SER 73 72 72 SER SER A . n A 1 74 GLY 74 73 73 GLY GLY A . n A 1 75 PRO 75 74 74 PRO PRO A . n A 1 76 GLU 76 75 75 GLU GLU A . n A 1 77 ASP 77 76 76 ASP ASP A . n A 1 78 LEU 78 77 77 LEU LEU A . n A 1 79 MSE 79 78 78 MSE MSE A . n A 1 80 GLY 80 79 79 GLY GLY A . n A 1 81 GLU 81 80 80 GLU GLU A . n A 1 82 ALA 82 81 81 ALA ALA A . n A 1 83 ALA 83 82 82 ALA ALA A . n A 1 84 ASP 84 83 83 ASP ASP A . n A 1 85 LEU 85 84 84 LEU LEU A . n A 1 86 LEU 86 85 85 LEU LEU A . n A 1 87 VAL 87 86 86 VAL VAL A . n A 1 88 ASP 88 87 87 ASP ASP A . n A 1 89 CYS 89 88 88 CYS CYS A . n A 1 90 THR 90 89 89 THR THR A . n A 1 91 PRO 91 90 90 PRO PRO A . n A 1 92 ALA 92 91 91 ALA ALA A . n A 1 93 SER 93 92 92 SER SER A . n A 1 94 ARG 94 93 93 ARG ARG A . n A 1 95 ASP 95 94 94 ASP ASP A . n A 1 96 GLY 96 95 95 GLY GLY A . n A 1 97 VAL 97 96 96 VAL VAL A . n A 1 98 ARG 98 97 97 ARG ARG A . n A 1 99 GLU 99 98 98 GLU GLU A . n A 1 100 TYR 100 99 99 TYR TYR A . n A 1 101 SER 101 100 100 SER SER A . n A 1 102 LEU 102 101 101 LEU LEU A . n A 1 103 TYR 103 102 102 TYR TYR A . n A 1 104 ARG 104 103 103 ARG ARG A . n A 1 105 MSE 105 104 104 MSE MSE A . n A 1 106 ALA 106 105 105 ALA ALA A . n A 1 107 PHE 107 106 106 PHE PHE A . n A 1 108 GLU 108 107 107 GLU GLU A . n A 1 109 SER 109 108 108 SER SER A . n A 1 110 GLY 110 109 109 GLY GLY A . n A 1 111 MSE 111 110 110 MSE MSE A . n A 1 112 ASN 112 111 111 ASN ASN A . n A 1 113 VAL 113 112 112 VAL VAL A . n A 1 114 VAL 114 113 113 VAL VAL A . n A 1 115 THR 115 114 114 THR THR A . n A 1 116 ALA 116 115 115 ALA ALA A . n A 1 117 ASN 117 116 116 ASN ASN A . n A 1 118 LYS 118 117 117 LYS LYS A . n A 1 119 SER 119 118 118 SER SER A . n A 1 120 GLY 120 119 119 GLY GLY A . n A 1 121 LEU 121 120 120 LEU LEU A . n A 1 122 ALA 122 121 121 ALA ALA A . n A 1 123 ASN 123 122 122 ASN ASN A . n A 1 124 LYS 124 123 123 LYS LYS A . n A 1 125 TRP 125 124 124 TRP TRP A . n A 1 126 HIS 126 125 125 HIS HIS A . n A 1 127 ASP 127 126 126 ASP ASP A . n A 1 128 ILE 128 127 127 ILE ILE A . n A 1 129 MSE 129 128 128 MSE MSE A . n A 1 130 ASP 130 129 129 ASP ASP A . n A 1 131 SER 131 130 130 SER SER A . n A 1 132 ALA 132 131 131 ALA ALA A . n A 1 133 ASN 133 132 132 ASN ASN A . n A 1 134 GLN 134 133 133 GLN GLN A . n A 1 135 ASN 135 134 134 ASN ASN A . n A 1 136 SER 136 135 135 SER SER A . n A 1 137 LYS 137 136 136 LYS LYS A . n A 1 138 TYR 138 137 137 TYR TYR A . n A 1 139 ILE 139 138 138 ILE ILE A . n A 1 140 ARG 140 139 139 ARG ARG A . n A 1 141 TYR 141 140 140 TYR TYR A . n A 1 142 GLU 142 141 141 GLU GLU A . n A 1 143 ALA 143 142 142 ALA ALA A . n A 1 144 THR 144 143 143 THR THR A . n A 1 145 VAL 145 144 144 VAL VAL A . n A 1 146 ALA 146 145 145 ALA ALA A . n A 1 147 GLY 147 146 146 GLY GLY A . n A 1 148 GLY 148 147 147 GLY GLY A . n A 1 149 VAL 149 148 148 VAL VAL A . n A 1 150 PRO 150 149 149 PRO PRO A . n A 1 151 LEU 151 150 150 LEU LEU A . n A 1 152 PHE 152 151 151 PHE PHE A . n A 1 153 SER 153 152 152 SER SER A . n A 1 154 VAL 154 153 153 VAL VAL A . n A 1 155 LEU 155 154 154 LEU LEU A . n A 1 156 ASP 156 155 155 ASP ASP A . n A 1 157 TYR 157 156 156 TYR TYR A . n A 1 158 SER 158 157 157 SER SER A . n A 1 159 ILE 159 158 158 ILE ILE A . n A 1 160 LEU 160 159 159 LEU LEU A . n A 1 161 PRO 161 160 160 PRO PRO A . n A 1 162 SER 162 161 161 SER SER A . n A 1 163 LYS 163 162 162 LYS LYS A . n A 1 164 VAL 164 163 163 VAL VAL A . n A 1 165 LYS 165 164 164 LYS LYS A . n A 1 166 ARG 166 165 165 ARG ARG A . n A 1 167 PHE 167 166 166 PHE PHE A . n A 1 168 ARG 168 167 167 ARG ARG A . n A 1 169 GLY 169 168 168 GLY GLY A . n A 1 170 ILE 170 169 169 ILE ILE A . n A 1 171 VAL 171 170 170 VAL VAL A . n A 1 172 SER 172 171 171 SER SER A . n A 1 173 SER 173 172 172 SER SER A . n A 1 174 THR 174 173 173 THR THR A . n A 1 175 ILE 175 174 174 ILE ILE A . n A 1 176 ASN 176 175 175 ASN ASN A . n A 1 177 TYR 177 176 176 TYR TYR A . n A 1 178 VAL 178 177 177 VAL VAL A . n A 1 179 ILE 179 178 178 ILE ILE A . n A 1 180 ARG 180 179 179 ARG ARG A . n A 1 181 ASN 181 180 180 ASN ASN A . n A 1 182 MSE 182 181 181 MSE MSE A . n A 1 183 ALA 183 182 182 ALA ALA A . n A 1 184 ASN 184 183 183 ASN ASN A . n A 1 185 GLY 185 184 184 GLY GLY A . n A 1 186 ARG 186 185 185 ARG ARG A . n A 1 187 SER 187 186 186 SER SER A . n A 1 188 LEU 188 187 187 LEU LEU A . n A 1 189 ARG 189 188 188 ARG ARG A . n A 1 190 ASP 190 189 189 ASP ASP A . n A 1 191 VAL 191 190 190 VAL VAL A . n A 1 192 VAL 192 191 191 VAL VAL A . n A 1 193 ASP 193 192 192 ASP ASP A . n A 1 194 ASP 194 193 193 ASP ASP A . n A 1 195 ALA 195 194 194 ALA ALA A . n A 1 196 ILE 196 195 195 ILE ILE A . n A 1 197 LYS 197 196 196 LYS LYS A . n A 1 198 LYS 198 197 197 LYS LYS A . n A 1 199 GLY 199 198 198 GLY GLY A . n A 1 200 ILE 200 199 199 ILE ILE A . n A 1 201 ALA 201 200 200 ALA ALA A . n A 1 202 GLU 202 201 201 GLU GLU A . n A 1 203 SER 203 202 202 SER SER A . n A 1 204 ASN 204 203 203 ASN ASN A . n A 1 205 PRO 205 204 204 PRO PRO A . n A 1 206 GLN 206 205 205 GLN GLN A . n A 1 207 ASP 207 206 206 ASP ASP A . n A 1 208 ASP 208 207 207 ASP ASP A . n A 1 209 LEU 209 208 208 LEU LEU A . n A 1 210 ASN 210 209 209 ASN ASN A . n A 1 211 GLY 211 210 210 GLY GLY A . n A 1 212 LEU 212 211 211 LEU LEU A . n A 1 213 ASP 213 212 212 ASP ASP A . n A 1 214 ALA 214 213 213 ALA ALA A . n A 1 215 ALA 215 214 214 ALA ALA A . n A 1 216 ARG 216 215 215 ARG ARG A . n A 1 217 LYS 217 216 216 LYS LYS A . n A 1 218 SER 218 217 217 SER SER A . n A 1 219 VAL 219 218 218 VAL VAL A . n A 1 220 ILE 220 219 219 ILE ILE A . n A 1 221 LEU 221 220 220 LEU LEU A . n A 1 222 VAL 222 221 221 VAL VAL A . n A 1 223 ASN 223 222 222 ASN ASN A . n A 1 224 HIS 224 223 223 HIS HIS A . n A 1 225 ILE 225 224 224 ILE ILE A . n A 1 226 PHE 226 225 225 PHE PHE A . n A 1 227 GLY 227 226 226 GLY GLY A . n A 1 228 THR 228 227 227 THR THR A . n A 1 229 GLU 229 228 228 GLU GLU A . n A 1 230 TYR 230 229 229 TYR TYR A . n A 1 231 THR 231 230 230 THR THR A . n A 1 232 LEU 232 231 231 LEU LEU A . n A 1 233 ASN 233 232 232 ASN ASN A . n A 1 234 ASP 234 233 233 ASP ASP A . n A 1 235 VAL 235 234 234 VAL VAL A . n A 1 236 GLU 236 235 235 GLU GLU A . n A 1 237 TYR 237 236 236 TYR TYR A . n A 1 238 SER 238 237 237 SER SER A . n A 1 239 GLY 239 238 238 GLY GLY A . n A 1 240 VAL 240 239 239 VAL VAL A . n A 1 241 ASP 241 240 240 ASP ASP A . n A 1 242 GLU 242 241 241 GLU GLU A . n A 1 243 ARG 243 242 242 ARG ARG A . n A 1 244 SER 244 243 243 SER SER A . n A 1 245 TYR 245 244 244 TYR TYR A . n A 1 246 ASN 246 245 245 ASN ASN A . n A 1 247 ALA 247 246 246 ALA ALA A . n A 1 248 ASN 248 247 247 ASN ASN A . n A 1 249 ASP 249 248 248 ASP ASP A . n A 1 250 ARG 250 249 249 ARG ARG A . n A 1 251 LEU 251 250 250 LEU LEU A . n A 1 252 VAL 252 251 251 VAL VAL A . n A 1 253 THR 253 252 252 THR THR A . n A 1 254 GLU 254 253 253 GLU GLU A . n A 1 255 VAL 255 254 254 VAL VAL A . n A 1 256 TYR 256 255 255 TYR TYR A . n A 1 257 VAL 257 256 256 VAL VAL A . n A 1 258 ASP 258 257 257 ASP ASP A . n A 1 259 ASP 259 258 258 ASP ASP A . n A 1 260 ARG 260 259 259 ARG ARG A . n A 1 261 ARG 261 260 260 ARG ARG A . n A 1 262 PRO 262 261 261 PRO PRO A . n A 1 263 VAL 263 262 262 VAL VAL A . n A 1 264 ALA 264 263 263 ALA ALA A . n A 1 265 VAL 265 264 264 VAL VAL A . n A 1 266 SER 266 265 265 SER SER A . n A 1 267 ARG 267 266 266 ARG ARG A . n A 1 268 ILE 268 267 267 ILE ILE A . n A 1 269 ILE 269 268 268 ILE ILE A . n A 1 270 SER 270 269 269 SER SER A . n A 1 271 LEU 271 270 270 LEU LEU A . n A 1 272 ASN 272 271 271 ASN ASN A . n A 1 273 LYS 273 272 272 LYS LYS A . n A 1 274 ASP 274 273 273 ASP ASP A . n A 1 275 ASP 275 274 274 ASP ASP A . n A 1 276 PHE 276 275 275 PHE PHE A . n A 1 277 LEU 277 276 276 LEU LEU A . n A 1 278 MSE 278 277 277 MSE MSE A . n A 1 279 SER 279 278 278 SER SER A . n A 1 280 ILE 280 279 279 ILE ILE A . n A 1 281 GLY 281 280 280 GLY GLY A . n A 1 282 MSE 282 281 281 MSE MSE A . n A 1 283 ASP 283 282 282 ASP ASP A . n A 1 284 GLY 284 283 283 GLY GLY A . n A 1 285 LEU 285 284 284 LEU LEU A . n A 1 286 GLY 286 285 285 GLY GLY A . n A 1 287 TYR 287 286 286 TYR TYR A . n A 1 288 GLN 288 287 287 GLN GLN A . n A 1 289 ILE 289 288 288 ILE ILE A . n A 1 290 GLU 290 289 289 GLU GLU A . n A 1 291 THR 291 290 290 THR THR A . n A 1 292 ASP 292 291 291 ASP ASP A . n A 1 293 SER 293 292 292 SER SER A . n A 1 294 ASN 294 293 293 ASN ASN A . n A 1 295 GLY 295 294 294 GLY GLY A . n A 1 296 THR 296 295 295 THR THR A . n A 1 297 VAL 297 296 296 VAL VAL A . n A 1 298 ASN 298 297 297 ASN ASN A . n A 1 299 VAL 299 298 298 VAL VAL A . n A 1 300 SER 300 299 299 SER SER A . n A 1 301 ASP 301 300 300 ASP ASP A . n A 1 302 ILE 302 301 301 ILE ILE A . n A 1 303 TYR 303 302 302 TYR TYR A . n A 1 304 ASP 304 303 303 ASP ASP A . n A 1 305 GLY 305 304 304 GLY GLY A . n A 1 306 PRO 306 305 305 PRO PRO A . n A 1 307 TYR 307 306 306 TYR TYR A . n A 1 308 GLU 308 307 307 GLU GLU A . n A 1 309 THR 309 308 308 THR THR A . n A 1 310 ALA 310 309 309 ALA ALA A . n A 1 311 GLY 311 310 310 GLY GLY A . n A 1 312 ALA 312 311 311 ALA ALA A . n A 1 313 VAL 313 312 312 VAL VAL A . n A 1 314 VAL 314 313 313 VAL VAL A . n A 1 315 ASN 315 314 314 ASN ASN A . n A 1 316 ASP 316 315 315 ASP ASP A . n A 1 317 ILE 317 316 316 ILE ILE A . n A 1 318 LEU 318 317 317 LEU LEU A . n A 1 319 LEU 319 318 318 LEU LEU A . n A 1 320 LEU 320 319 319 LEU LEU A . n A 1 321 SER 321 320 320 SER SER A . n A 1 322 LYS 322 321 321 LYS LYS A . n A 1 323 VAL 323 322 322 VAL VAL A . n A 1 324 GLN 324 323 ? ? ? A . n A 1 325 LYS 325 324 ? ? ? A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA 1 325 1 NA NA A . C 3 NDP 1 326 2 NDP NDP A . D 4 EDO 1 327 3 EDO EDO A . E 4 EDO 1 328 4 EDO EDO A . F 4 EDO 1 329 5 EDO EDO A . G 4 EDO 1 330 6 EDO EDO A . H 4 EDO 1 331 7 EDO EDO A . I 4 EDO 1 332 8 EDO EDO A . J 5 HOH 1 333 9 HOH HOH A . J 5 HOH 2 334 10 HOH HOH A . J 5 HOH 3 335 11 HOH HOH A . J 5 HOH 4 336 12 HOH HOH A . J 5 HOH 5 337 13 HOH HOH A . J 5 HOH 6 338 14 HOH HOH A . J 5 HOH 7 339 15 HOH HOH A . J 5 HOH 8 340 16 HOH HOH A . J 5 HOH 9 341 17 HOH HOH A . J 5 HOH 10 342 18 HOH HOH A . J 5 HOH 11 343 19 HOH HOH A . J 5 HOH 12 344 20 HOH HOH A . J 5 HOH 13 345 21 HOH HOH A . J 5 HOH 14 346 22 HOH HOH A . J 5 HOH 15 347 23 HOH HOH A . J 5 HOH 16 348 24 HOH HOH A . J 5 HOH 17 349 25 HOH HOH A . J 5 HOH 18 350 26 HOH HOH A . J 5 HOH 19 351 27 HOH HOH A . J 5 HOH 20 352 28 HOH HOH A . J 5 HOH 21 353 29 HOH HOH A . J 5 HOH 22 354 30 HOH HOH A . J 5 HOH 23 355 31 HOH HOH A . J 5 HOH 24 356 32 HOH HOH A . J 5 HOH 25 357 33 HOH HOH A . J 5 HOH 26 358 34 HOH HOH A . J 5 HOH 27 359 35 HOH HOH A . J 5 HOH 28 360 36 HOH HOH A . J 5 HOH 29 361 37 HOH HOH A . J 5 HOH 30 362 38 HOH HOH A . J 5 HOH 31 363 39 HOH HOH A . J 5 HOH 32 364 40 HOH HOH A . J 5 HOH 33 365 41 HOH HOH A . J 5 HOH 34 366 42 HOH HOH A . J 5 HOH 35 367 43 HOH HOH A . J 5 HOH 36 368 44 HOH HOH A . J 5 HOH 37 369 45 HOH HOH A . J 5 HOH 38 370 46 HOH HOH A . J 5 HOH 39 371 47 HOH HOH A . J 5 HOH 40 372 48 HOH HOH A . J 5 HOH 41 373 49 HOH HOH A . J 5 HOH 42 374 50 HOH HOH A . J 5 HOH 43 375 51 HOH HOH A . J 5 HOH 44 376 52 HOH HOH A . J 5 HOH 45 377 53 HOH HOH A . J 5 HOH 46 378 54 HOH HOH A . J 5 HOH 47 379 55 HOH HOH A . J 5 HOH 48 380 56 HOH HOH A . J 5 HOH 49 381 57 HOH HOH A . J 5 HOH 50 382 58 HOH HOH A . J 5 HOH 51 383 59 HOH HOH A . J 5 HOH 52 384 60 HOH HOH A . J 5 HOH 53 385 61 HOH HOH A . J 5 HOH 54 386 62 HOH HOH A . J 5 HOH 55 387 63 HOH HOH A . J 5 HOH 56 388 64 HOH HOH A . J 5 HOH 57 389 65 HOH HOH A . J 5 HOH 58 390 66 HOH HOH A . J 5 HOH 59 391 67 HOH HOH A . J 5 HOH 60 392 68 HOH HOH A . J 5 HOH 61 393 69 HOH HOH A . J 5 HOH 62 394 70 HOH HOH A . J 5 HOH 63 395 71 HOH HOH A . J 5 HOH 64 396 72 HOH HOH A . J 5 HOH 65 397 73 HOH HOH A . J 5 HOH 66 398 74 HOH HOH A . J 5 HOH 67 399 75 HOH HOH A . J 5 HOH 68 400 76 HOH HOH A . J 5 HOH 69 401 77 HOH HOH A . J 5 HOH 70 402 78 HOH HOH A . J 5 HOH 71 403 79 HOH HOH A . J 5 HOH 72 404 80 HOH HOH A . J 5 HOH 73 405 81 HOH HOH A . J 5 HOH 74 406 82 HOH HOH A . J 5 HOH 75 407 83 HOH HOH A . J 5 HOH 76 408 84 HOH HOH A . J 5 HOH 77 409 85 HOH HOH A . J 5 HOH 78 410 86 HOH HOH A . J 5 HOH 79 411 87 HOH HOH A . J 5 HOH 80 412 88 HOH HOH A . J 5 HOH 81 413 89 HOH HOH A . J 5 HOH 82 414 90 HOH HOH A . J 5 HOH 83 415 91 HOH HOH A . J 5 HOH 84 416 92 HOH HOH A . J 5 HOH 85 417 93 HOH HOH A . J 5 HOH 86 418 94 HOH HOH A . J 5 HOH 87 419 95 HOH HOH A . J 5 HOH 88 420 96 HOH HOH A . J 5 HOH 89 421 97 HOH HOH A . J 5 HOH 90 422 98 HOH HOH A . J 5 HOH 91 423 99 HOH HOH A . J 5 HOH 92 424 100 HOH HOH A . J 5 HOH 93 425 101 HOH HOH A . J 5 HOH 94 426 102 HOH HOH A . J 5 HOH 95 427 103 HOH HOH A . J 5 HOH 96 428 104 HOH HOH A . J 5 HOH 97 429 105 HOH HOH A . J 5 HOH 98 430 106 HOH HOH A . J 5 HOH 99 431 107 HOH HOH A . J 5 HOH 100 432 108 HOH HOH A . J 5 HOH 101 433 109 HOH HOH A . J 5 HOH 102 434 110 HOH HOH A . J 5 HOH 103 435 111 HOH HOH A . J 5 HOH 104 436 112 HOH HOH A . J 5 HOH 105 437 113 HOH HOH A . J 5 HOH 106 438 114 HOH HOH A . J 5 HOH 107 439 115 HOH HOH A . J 5 HOH 108 440 116 HOH HOH A . J 5 HOH 109 441 117 HOH HOH A . J 5 HOH 110 442 118 HOH HOH A . J 5 HOH 111 443 119 HOH HOH A . J 5 HOH 112 444 120 HOH HOH A . J 5 HOH 113 445 121 HOH HOH A . J 5 HOH 114 446 122 HOH HOH A . J 5 HOH 115 447 123 HOH HOH A . J 5 HOH 116 448 124 HOH HOH A . J 5 HOH 117 449 125 HOH HOH A . J 5 HOH 118 450 126 HOH HOH A . J 5 HOH 119 451 127 HOH HOH A . J 5 HOH 120 452 128 HOH HOH A . J 5 HOH 121 453 129 HOH HOH A . J 5 HOH 122 454 130 HOH HOH A . J 5 HOH 123 455 131 HOH HOH A . J 5 HOH 124 456 132 HOH HOH A . J 5 HOH 125 457 133 HOH HOH A . J 5 HOH 126 458 134 HOH HOH A . J 5 HOH 127 459 135 HOH HOH A . J 5 HOH 128 460 136 HOH HOH A . J 5 HOH 129 461 137 HOH HOH A . J 5 HOH 130 462 138 HOH HOH A . J 5 HOH 131 463 139 HOH HOH A . J 5 HOH 132 464 140 HOH HOH A . J 5 HOH 133 465 141 HOH HOH A . J 5 HOH 134 466 142 HOH HOH A . J 5 HOH 135 467 143 HOH HOH A . J 5 HOH 136 468 144 HOH HOH A . J 5 HOH 137 469 145 HOH HOH A . J 5 HOH 138 470 146 HOH HOH A . J 5 HOH 139 471 147 HOH HOH A . J 5 HOH 140 472 148 HOH HOH A . J 5 HOH 141 473 149 HOH HOH A . J 5 HOH 142 474 150 HOH HOH A . J 5 HOH 143 475 151 HOH HOH A . J 5 HOH 144 476 152 HOH HOH A . J 5 HOH 145 477 153 HOH HOH A . J 5 HOH 146 478 154 HOH HOH A . J 5 HOH 147 479 155 HOH HOH A . J 5 HOH 148 480 156 HOH HOH A . J 5 HOH 149 481 157 HOH HOH A . J 5 HOH 150 482 158 HOH HOH A . J 5 HOH 151 483 159 HOH HOH A . J 5 HOH 152 484 160 HOH HOH A . J 5 HOH 153 485 161 HOH HOH A . J 5 HOH 154 486 162 HOH HOH A . J 5 HOH 155 487 163 HOH HOH A . J 5 HOH 156 488 164 HOH HOH A . J 5 HOH 157 489 165 HOH HOH A . J 5 HOH 158 490 166 HOH HOH A . J 5 HOH 159 491 167 HOH HOH A . J 5 HOH 160 492 168 HOH HOH A . J 5 HOH 161 493 169 HOH HOH A . J 5 HOH 162 494 170 HOH HOH A . J 5 HOH 163 495 171 HOH HOH A . J 5 HOH 164 496 172 HOH HOH A . J 5 HOH 165 497 173 HOH HOH A . J 5 HOH 166 498 174 HOH HOH A . J 5 HOH 167 499 175 HOH HOH A . J 5 HOH 168 500 176 HOH HOH A . J 5 HOH 169 501 177 HOH HOH A . J 5 HOH 170 502 178 HOH HOH A . J 5 HOH 171 503 179 HOH HOH A . J 5 HOH 172 504 180 HOH HOH A . J 5 HOH 173 505 181 HOH HOH A . J 5 HOH 174 506 182 HOH HOH A . J 5 HOH 175 507 183 HOH HOH A . J 5 HOH 176 508 184 HOH HOH A . J 5 HOH 177 509 185 HOH HOH A . J 5 HOH 178 510 186 HOH HOH A . J 5 HOH 179 511 187 HOH HOH A . J 5 HOH 180 512 188 HOH HOH A . J 5 HOH 181 513 189 HOH HOH A . J 5 HOH 182 514 190 HOH HOH A . J 5 HOH 183 515 191 HOH HOH A . J 5 HOH 184 516 192 HOH HOH A . J 5 HOH 185 517 193 HOH HOH A . J 5 HOH 186 518 194 HOH HOH A . J 5 HOH 187 519 195 HOH HOH A . J 5 HOH 188 520 196 HOH HOH A . J 5 HOH 189 521 197 HOH HOH A . J 5 HOH 190 522 198 HOH HOH A . J 5 HOH 191 523 199 HOH HOH A . J 5 HOH 192 524 200 HOH HOH A . J 5 HOH 193 525 201 HOH HOH A . J 5 HOH 194 526 202 HOH HOH A . J 5 HOH 195 527 203 HOH HOH A . J 5 HOH 196 528 204 HOH HOH A . J 5 HOH 197 529 205 HOH HOH A . J 5 HOH 198 530 206 HOH HOH A . J 5 HOH 199 531 207 HOH HOH A . J 5 HOH 200 532 208 HOH HOH A . J 5 HOH 201 533 209 HOH HOH A . J 5 HOH 202 534 210 HOH HOH A . J 5 HOH 203 535 211 HOH HOH A . J 5 HOH 204 536 212 HOH HOH A . J 5 HOH 205 537 213 HOH HOH A . J 5 HOH 206 538 214 HOH HOH A . J 5 HOH 207 539 215 HOH HOH A . J 5 HOH 208 540 216 HOH HOH A . J 5 HOH 209 541 217 HOH HOH A . J 5 HOH 210 542 218 HOH HOH A . J 5 HOH 211 543 219 HOH HOH A . J 5 HOH 212 544 220 HOH HOH A . J 5 HOH 213 545 221 HOH HOH A . J 5 HOH 214 546 222 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 10 A MSE 9 ? MET SELENOMETHIONINE 2 A MSE 79 A MSE 78 ? MET SELENOMETHIONINE 3 A MSE 105 A MSE 104 ? MET SELENOMETHIONINE 4 A MSE 111 A MSE 110 ? MET SELENOMETHIONINE 5 A MSE 129 A MSE 128 ? MET SELENOMETHIONINE 6 A MSE 182 A MSE 181 ? MET SELENOMETHIONINE 7 A MSE 278 A MSE 277 ? MET SELENOMETHIONINE 8 A MSE 282 A MSE 281 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7420 ? 1 MORE 10 ? 1 'SSA (A^2)' 23800 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 69.8210000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 60.3940000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A GLU 142 ? A GLU 141 ? 1_555 NA ? B NA . ? A NA 325 ? 1_555 OE2 ? A GLU 142 ? A GLU 141 ? 1_555 78.3 ? 2 O ? A GLU 142 ? A GLU 141 ? 1_555 NA ? B NA . ? A NA 325 ? 1_555 O ? A VAL 145 ? A VAL 144 ? 1_555 82.7 ? 3 OE2 ? A GLU 142 ? A GLU 141 ? 1_555 NA ? B NA . ? A NA 325 ? 1_555 O ? A VAL 145 ? A VAL 144 ? 1_555 127.6 ? 4 O ? A GLU 142 ? A GLU 141 ? 1_555 NA ? B NA . ? A NA 325 ? 1_555 O ? A ALA 146 ? A ALA 145 ? 1_555 119.9 ? 5 OE2 ? A GLU 142 ? A GLU 141 ? 1_555 NA ? B NA . ? A NA 325 ? 1_555 O ? A ALA 146 ? A ALA 145 ? 1_555 159.6 ? 6 O ? A VAL 145 ? A VAL 144 ? 1_555 NA ? B NA . ? A NA 325 ? 1_555 O ? A ALA 146 ? A ALA 145 ? 1_555 67.6 ? 7 O ? A GLU 142 ? A GLU 141 ? 1_555 NA ? B NA . ? A NA 325 ? 1_555 O ? A VAL 149 ? A VAL 148 ? 1_555 157.4 ? 8 OE2 ? A GLU 142 ? A GLU 141 ? 1_555 NA ? B NA . ? A NA 325 ? 1_555 O ? A VAL 149 ? A VAL 148 ? 1_555 83.1 ? 9 O ? A VAL 145 ? A VAL 144 ? 1_555 NA ? B NA . ? A NA 325 ? 1_555 O ? A VAL 149 ? A VAL 148 ? 1_555 119.1 ? 10 O ? A ALA 146 ? A ALA 145 ? 1_555 NA ? B NA . ? A NA 325 ? 1_555 O ? A VAL 149 ? A VAL 148 ? 1_555 77.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-09-01 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2019-07-24 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Author supporting evidence' 4 3 'Structure model' 'Refinement description' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' 8 5 'Structure model' 'Database references' 9 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_struct_assembly_auth_evidence 2 3 'Structure model' software 3 4 'Structure model' software 4 4 'Structure model' struct_conn 5 5 'Structure model' database_2 6 5 'Structure model' struct_ref_seq_dif 7 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 31.2118 _pdbx_refine_tls.origin_y 31.4842 _pdbx_refine_tls.origin_z 13.9403 _pdbx_refine_tls.T[1][1] -0.0475 _pdbx_refine_tls.T[2][2] -0.0398 _pdbx_refine_tls.T[3][3] -0.0482 _pdbx_refine_tls.T[1][2] -0.0017 _pdbx_refine_tls.T[1][3] -0.0123 _pdbx_refine_tls.T[2][3] 0.0062 _pdbx_refine_tls.L[1][1] 0.6958 _pdbx_refine_tls.L[2][2] 0.7172 _pdbx_refine_tls.L[3][3] 0.7958 _pdbx_refine_tls.L[1][2] 0.1058 _pdbx_refine_tls.L[1][3] 0.1240 _pdbx_refine_tls.L[2][3] -0.0433 _pdbx_refine_tls.S[1][1] 0.0193 _pdbx_refine_tls.S[2][2] -0.0056 _pdbx_refine_tls.S[3][3] -0.0137 _pdbx_refine_tls.S[1][2] -0.0168 _pdbx_refine_tls.S[1][3] -0.0511 _pdbx_refine_tls.S[2][3] -0.0127 _pdbx_refine_tls.S[2][1] -0.0439 _pdbx_refine_tls.S[3][1] 0.0291 _pdbx_refine_tls.S[3][2] -0.0293 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 2 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 322 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.selection ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0019 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 5 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? 7 SHARP . ? ? ? ? phasing ? ? ? 8 # _pdbx_entry_details.entry_id 3ING _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 SE _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 MSE _pdbx_validate_rmsd_bond.auth_seq_id_1 110 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CE _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 MSE _pdbx_validate_rmsd_bond.auth_seq_id_2 110 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.480 _pdbx_validate_rmsd_bond.bond_target_value 1.950 _pdbx_validate_rmsd_bond.bond_deviation -0.470 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.059 _pdbx_validate_rmsd_bond.linker_flag N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CA _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 LEU _pdbx_validate_rmsd_angle.auth_seq_id_1 84 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CB _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 LEU _pdbx_validate_rmsd_angle.auth_seq_id_2 84 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CG _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 LEU _pdbx_validate_rmsd_angle.auth_seq_id_3 84 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 129.17 _pdbx_validate_rmsd_angle.angle_target_value 115.30 _pdbx_validate_rmsd_angle.angle_deviation 13.87 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.30 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 41 ? ? -125.56 -167.83 2 1 ASN A 50 ? ? -108.00 74.26 3 1 TYR A 140 ? ? -150.18 35.98 4 1 LEU A 150 ? ? -138.76 -68.05 5 1 ARG A 259 ? ? 63.86 -3.41 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 2 ? CG ? A LYS 3 CG 2 1 Y 1 A LYS 2 ? CD ? A LYS 3 CD 3 1 Y 1 A LYS 2 ? CE ? A LYS 3 CE 4 1 Y 1 A LYS 2 ? NZ ? A LYS 3 NZ 5 1 Y 1 A ARG 29 ? NE ? A ARG 30 NE 6 1 Y 1 A ARG 29 ? CZ ? A ARG 30 CZ 7 1 Y 1 A ARG 29 ? NH1 ? A ARG 30 NH1 8 1 Y 1 A ARG 29 ? NH2 ? A ARG 30 NH2 9 1 Y 1 A PHE 32 ? CD1 ? A PHE 33 CD1 10 1 Y 1 A PHE 32 ? CD2 ? A PHE 33 CD2 11 1 Y 1 A PHE 32 ? CE1 ? A PHE 33 CE1 12 1 Y 1 A PHE 32 ? CE2 ? A PHE 33 CE2 13 1 Y 1 A PHE 32 ? CZ ? A PHE 33 CZ 14 1 Y 1 A SER 33 ? OG ? A SER 34 OG 15 1 Y 1 A LYS 35 ? CE ? A LYS 36 CE 16 1 Y 1 A LYS 35 ? NZ ? A LYS 36 NZ 17 1 Y 1 A ARG 49 ? NE ? A ARG 50 NE 18 1 Y 1 A ARG 49 ? CZ ? A ARG 50 CZ 19 1 Y 1 A ARG 49 ? NH1 ? A ARG 50 NH1 20 1 Y 1 A ARG 49 ? NH2 ? A ARG 50 NH2 21 1 Y 1 A ASN 50 ? CG ? A ASN 51 CG 22 1 Y 1 A ASN 50 ? OD1 ? A ASN 51 OD1 23 1 Y 1 A ASN 50 ? ND2 ? A ASN 51 ND2 24 1 Y 1 A GLU 75 ? CG ? A GLU 76 CG 25 1 Y 1 A GLU 75 ? CD ? A GLU 76 CD 26 1 Y 1 A GLU 75 ? OE1 ? A GLU 76 OE1 27 1 Y 1 A GLU 75 ? OE2 ? A GLU 76 OE2 28 1 Y 1 A LYS 164 ? CE ? A LYS 165 CE 29 1 Y 1 A LYS 164 ? NZ ? A LYS 165 NZ 30 1 Y 1 A ARG 165 ? CZ ? A ARG 166 CZ 31 1 Y 1 A ARG 165 ? NH1 ? A ARG 166 NH1 32 1 Y 1 A ARG 165 ? NH2 ? A ARG 166 NH2 33 1 Y 1 A GLU 235 ? CG ? A GLU 236 CG 34 1 Y 1 A GLU 235 ? CD ? A GLU 236 CD 35 1 Y 1 A GLU 235 ? OE1 ? A GLU 236 OE1 36 1 Y 1 A GLU 235 ? OE2 ? A GLU 236 OE2 37 1 Y 1 A ASP 257 ? CG ? A ASP 258 CG 38 1 Y 1 A ASP 257 ? OD1 ? A ASP 258 OD1 39 1 Y 1 A ASP 257 ? OD2 ? A ASP 258 OD2 40 1 Y 1 A ASP 258 ? CG ? A ASP 259 CG 41 1 Y 1 A ASP 258 ? OD1 ? A ASP 259 OD1 42 1 Y 1 A ASP 258 ? OD2 ? A ASP 259 OD2 43 1 Y 1 A ARG 259 ? CG ? A ARG 260 CG 44 1 Y 1 A ARG 259 ? CD ? A ARG 260 CD 45 1 Y 1 A ARG 259 ? NE ? A ARG 260 NE 46 1 Y 1 A ARG 259 ? CZ ? A ARG 260 CZ 47 1 Y 1 A ARG 259 ? NH1 ? A ARG 260 NH1 48 1 Y 1 A ARG 259 ? NH2 ? A ARG 260 NH2 49 1 Y 1 A ARG 260 ? NE ? A ARG 261 NE 50 1 Y 1 A ARG 260 ? CZ ? A ARG 261 CZ 51 1 Y 1 A ARG 260 ? NH1 ? A ARG 261 NH1 52 1 Y 1 A ARG 260 ? NH2 ? A ARG 261 NH2 53 1 Y 1 A LYS 272 ? CG ? A LYS 273 CG 54 1 Y 1 A LYS 272 ? CD ? A LYS 273 CD 55 1 Y 1 A LYS 272 ? CE ? A LYS 273 CE 56 1 Y 1 A LYS 272 ? NZ ? A LYS 273 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A MSE 1 ? A MSE 2 3 1 Y 1 A SER 30 ? A SER 31 4 1 Y 1 A ALA 31 ? A ALA 32 5 1 Y 1 A GLN 323 ? A GLN 324 6 1 Y 1 A LYS 324 ? A LYS 325 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SODIUM ION' NA 3 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' NDP 4 1,2-ETHANEDIOL EDO 5 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #