HEADER HYDROLASE 14-AUG-09 3IOF TITLE CRYSTAL STRUCTURE OF CPHA N220G MUTANT WITH INHIBITOR 10A COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.5.2.6; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AEROMONAS HYDROPHILA; SOURCE 3 ORGANISM_TAXID: 644; SOURCE 4 GENE: CPHA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET9A-CPHA KEYWDS HYDROLASE, ANTIBIOTIC RESISTANCE, METAL-BINDING EXPDTA X-RAY DIFFRACTION AUTHOR H.DELBRUCK,C.BEBRONE,K.M.V.HOFFMANN REVDAT 4 01-NOV-23 3IOF 1 REMARK SEQADV LINK REVDAT 3 14-JAN-15 3IOF 1 REMARK VERSN REVDAT 2 14-JUL-10 3IOF 1 JRNL REVDAT 1 23-JUN-10 3IOF 0 JRNL AUTH P.LASSAUX,M.HAMEL,M.GULEA,H.DELBRUCK,P.S.MERCURI,L.HORSFALL, JRNL AUTH 2 D.DEHARENG,M.KUPPER,J.-M.FRERE,K.HOFFMANN,M.GALLENI, JRNL AUTH 3 C.BEBRONE JRNL TITL MERCAPTOPHOSPHONATE COMPOUNDS AS BROAD-SPECTRUM INHIBITORS JRNL TITL 2 OF THE METALLO-BETA-LACTAMASES JRNL REF J.MED.CHEM. V. 53 4862 2010 JRNL REFN ISSN 0022-2623 JRNL PMID 20527888 JRNL DOI 10.1021/JM100213C REMARK 2 REMARK 2 RESOLUTION. 1.44 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0070 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.44 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.59 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 46231 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.124 REMARK 3 R VALUE (WORKING SET) : 0.123 REMARK 3 FREE R VALUE : 0.141 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2342 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.44 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.47 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3054 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.30 REMARK 3 BIN R VALUE (WORKING SET) : 0.1220 REMARK 3 BIN FREE R VALUE SET COUNT : 176 REMARK 3 BIN FREE R VALUE : 0.1540 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1776 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 87 REMARK 3 SOLVENT ATOMS : 290 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 9.69 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.49000 REMARK 3 B22 (A**2) : 0.50000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.046 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.047 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.025 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.292 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.975 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.969 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2045 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1429 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2777 ; 1.579 ; 2.015 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3514 ; 1.504 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 226 ; 6.234 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 86 ;27.493 ;23.256 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 374 ;13.273 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;19.150 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 313 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2072 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 387 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1159 ; 0.583 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 457 ; 0.194 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1923 ; 0.968 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 886 ; 1.591 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 854 ; 2.284 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 20 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 41 A 48 REMARK 3 ORIGIN FOR THE GROUP (A): 8.5130 30.5390 58.7260 REMARK 3 T TENSOR REMARK 3 T11: 0.0665 T22: 0.0460 REMARK 3 T33: 0.0317 T12: 0.0047 REMARK 3 T13: 0.0041 T23: 0.0157 REMARK 3 L TENSOR REMARK 3 L11: 1.6463 L22: 7.2628 REMARK 3 L33: 1.5148 L12: 2.2692 REMARK 3 L13: 0.5615 L23: 1.2008 REMARK 3 S TENSOR REMARK 3 S11: 0.0096 S12: -0.1365 S13: -0.0104 REMARK 3 S21: 0.3395 S22: -0.0518 S23: -0.0017 REMARK 3 S31: 0.1122 S32: -0.0476 S33: 0.0422 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 49 A 71 REMARK 3 ORIGIN FOR THE GROUP (A): 7.4340 34.7770 54.9470 REMARK 3 T TENSOR REMARK 3 T11: 0.0434 T22: 0.0383 REMARK 3 T33: 0.0236 T12: 0.0035 REMARK 3 T13: 0.0040 T23: 0.0041 REMARK 3 L TENSOR REMARK 3 L11: 1.0108 L22: 2.8117 REMARK 3 L33: 1.1097 L12: 0.6914 REMARK 3 L13: 0.1691 L23: 0.7225 REMARK 3 S TENSOR REMARK 3 S11: 0.0075 S12: -0.1169 S13: 0.0157 REMARK 3 S21: 0.1665 S22: -0.0403 S23: 0.0455 REMARK 3 S31: 0.0279 S32: -0.0571 S33: 0.0328 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 72 A 86 REMARK 3 ORIGIN FOR THE GROUP (A): 13.4270 26.8020 48.1320 REMARK 3 T TENSOR REMARK 3 T11: 0.0450 T22: 0.0251 REMARK 3 T33: 0.0520 T12: 0.0123 REMARK 3 T13: 0.0116 T23: 0.0059 REMARK 3 L TENSOR REMARK 3 L11: 1.4930 L22: 2.5309 REMARK 3 L33: 0.7496 L12: 0.6510 REMARK 3 L13: 0.3970 L23: -0.0859 REMARK 3 S TENSOR REMARK 3 S11: 0.0122 S12: 0.0164 S13: -0.1895 REMARK 3 S21: -0.0531 S22: 0.0010 S23: -0.1277 REMARK 3 S31: 0.0999 S32: 0.0804 S33: -0.0132 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 87 A 96 REMARK 3 ORIGIN FOR THE GROUP (A): 17.8720 39.1800 54.6420 REMARK 3 T TENSOR REMARK 3 T11: 0.0474 T22: 0.0340 REMARK 3 T33: 0.0401 T12: -0.0014 REMARK 3 T13: -0.0076 T23: 0.0047 REMARK 3 L TENSOR REMARK 3 L11: 0.8912 L22: 2.3672 REMARK 3 L33: 1.1359 L12: -0.5361 REMARK 3 L13: 0.4405 L23: -0.5868 REMARK 3 S TENSOR REMARK 3 S11: -0.0516 S12: -0.0750 S13: 0.0693 REMARK 3 S21: 0.1779 S22: -0.0038 S23: -0.1694 REMARK 3 S31: -0.1071 S32: 0.0622 S33: 0.0554 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 97 A 102 REMARK 3 ORIGIN FOR THE GROUP (A): 19.5710 29.7930 59.2710 REMARK 3 T TENSOR REMARK 3 T11: 0.0570 T22: 0.0165 REMARK 3 T33: 0.0414 T12: 0.0171 REMARK 3 T13: -0.0111 T23: 0.0145 REMARK 3 L TENSOR REMARK 3 L11: 2.9975 L22: 1.8961 REMARK 3 L33: 4.9977 L12: 1.1417 REMARK 3 L13: -0.5549 L23: 1.0734 REMARK 3 S TENSOR REMARK 3 S11: -0.1013 S12: -0.0741 S13: 0.0066 REMARK 3 S21: 0.1363 S22: 0.0164 S23: -0.1266 REMARK 3 S31: 0.0475 S32: 0.1180 S33: 0.0848 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 103 A 111 REMARK 3 ORIGIN FOR THE GROUP (A): 20.6750 23.1150 50.6830 REMARK 3 T TENSOR REMARK 3 T11: 0.0910 T22: 0.0457 REMARK 3 T33: 0.0690 T12: 0.0277 REMARK 3 T13: 0.0042 T23: 0.0098 REMARK 3 L TENSOR REMARK 3 L11: 0.5848 L22: 1.5123 REMARK 3 L33: 6.3075 L12: -0.0445 REMARK 3 L13: -0.6288 L23: -2.5097 REMARK 3 S TENSOR REMARK 3 S11: 0.0302 S12: 0.0334 S13: -0.1077 REMARK 3 S21: -0.0611 S22: -0.2069 S23: -0.0706 REMARK 3 S31: 0.3765 S32: 0.3761 S33: 0.1767 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 112 A 131 REMARK 3 ORIGIN FOR THE GROUP (A): 15.7990 38.9340 45.0130 REMARK 3 T TENSOR REMARK 3 T11: 0.0294 T22: 0.0370 REMARK 3 T33: 0.0297 T12: 0.0008 REMARK 3 T13: 0.0077 T23: 0.0082 REMARK 3 L TENSOR REMARK 3 L11: 1.1882 L22: 0.9471 REMARK 3 L33: 1.1766 L12: -0.2205 REMARK 3 L13: 0.4517 L23: -0.1229 REMARK 3 S TENSOR REMARK 3 S11: 0.0119 S12: 0.0192 S13: 0.0580 REMARK 3 S21: -0.0141 S22: -0.0397 S23: -0.0690 REMARK 3 S31: -0.0039 S32: 0.0706 S33: 0.0278 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 133 A 141 REMARK 3 ORIGIN FOR THE GROUP (A): 16.6200 34.9860 35.8490 REMARK 3 T TENSOR REMARK 3 T11: 0.0454 T22: 0.0619 REMARK 3 T33: 0.0402 T12: 0.0099 REMARK 3 T13: 0.0143 T23: 0.0016 REMARK 3 L TENSOR REMARK 3 L11: 2.1721 L22: 1.0104 REMARK 3 L33: 2.0605 L12: -0.5033 REMARK 3 L13: 1.9845 L23: -0.6370 REMARK 3 S TENSOR REMARK 3 S11: 0.0384 S12: 0.1215 S13: -0.1176 REMARK 3 S21: -0.0958 S22: -0.0187 S23: -0.0269 REMARK 3 S31: 0.0602 S32: 0.1537 S33: -0.0197 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 142 A 149 REMARK 3 ORIGIN FOR THE GROUP (A): 15.2820 45.0000 33.5500 REMARK 3 T TENSOR REMARK 3 T11: 0.0609 T22: 0.0405 REMARK 3 T33: 0.0318 T12: -0.0031 REMARK 3 T13: 0.0205 T23: 0.0157 REMARK 3 L TENSOR REMARK 3 L11: 1.7314 L22: 3.3967 REMARK 3 L33: 3.0545 L12: -0.2890 REMARK 3 L13: 0.0670 L23: -0.3998 REMARK 3 S TENSOR REMARK 3 S11: -0.0007 S12: 0.1503 S13: 0.0758 REMARK 3 S21: -0.2944 S22: -0.0223 S23: -0.2106 REMARK 3 S31: -0.1615 S32: 0.1418 S33: 0.0230 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 150 A 157 REMARK 3 ORIGIN FOR THE GROUP (A): 11.8980 51.8170 43.1200 REMARK 3 T TENSOR REMARK 3 T11: 0.0930 T22: 0.0207 REMARK 3 T33: 0.0419 T12: 0.0077 REMARK 3 T13: -0.0150 T23: 0.0032 REMARK 3 L TENSOR REMARK 3 L11: 4.1961 L22: 4.0208 REMARK 3 L33: 6.5234 L12: -0.8415 REMARK 3 L13: -1.5098 L23: 2.8054 REMARK 3 S TENSOR REMARK 3 S11: 0.0472 S12: 0.2202 S13: 0.1724 REMARK 3 S21: -0.2426 S22: -0.1483 S23: -0.0126 REMARK 3 S31: -0.5219 S32: -0.0760 S33: 0.1011 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 158 A 166 REMARK 3 ORIGIN FOR THE GROUP (A): 13.4620 53.8870 51.4650 REMARK 3 T TENSOR REMARK 3 T11: 0.0965 T22: 0.0105 REMARK 3 T33: 0.0531 T12: -0.0038 REMARK 3 T13: -0.0115 T23: -0.0146 REMARK 3 L TENSOR REMARK 3 L11: 2.6402 L22: 4.9533 REMARK 3 L33: 5.0272 L12: -0.9955 REMARK 3 L13: 0.3124 L23: 2.6579 REMARK 3 S TENSOR REMARK 3 S11: -0.0479 S12: -0.1230 S13: 0.2164 REMARK 3 S21: -0.1058 S22: -0.0733 S23: -0.0048 REMARK 3 S31: -0.4142 S32: -0.0270 S33: 0.1212 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 167 A 175 REMARK 3 ORIGIN FOR THE GROUP (A): 20.0930 41.1410 39.1220 REMARK 3 T TENSOR REMARK 3 T11: 0.0309 T22: 0.0651 REMARK 3 T33: 0.0464 T12: -0.0018 REMARK 3 T13: 0.0268 T23: 0.0191 REMARK 3 L TENSOR REMARK 3 L11: 0.8539 L22: 5.0924 REMARK 3 L33: 2.1999 L12: -0.1339 REMARK 3 L13: 0.3940 L23: 2.5374 REMARK 3 S TENSOR REMARK 3 S11: -0.0044 S12: 0.1052 S13: 0.0478 REMARK 3 S21: -0.1447 S22: -0.0498 S23: -0.1304 REMARK 3 S31: -0.0997 S32: 0.1255 S33: 0.0542 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 176 A 188 REMARK 3 ORIGIN FOR THE GROUP (A): 10.4320 24.0460 37.3360 REMARK 3 T TENSOR REMARK 3 T11: 0.0697 T22: 0.0539 REMARK 3 T33: 0.0720 T12: 0.0223 REMARK 3 T13: 0.0151 T23: -0.0315 REMARK 3 L TENSOR REMARK 3 L11: 0.6042 L22: 2.8523 REMARK 3 L33: 1.9313 L12: 0.0628 REMARK 3 L13: 0.0909 L23: -1.2259 REMARK 3 S TENSOR REMARK 3 S11: 0.0087 S12: 0.1409 S13: -0.1862 REMARK 3 S21: -0.1375 S22: -0.0761 S23: -0.0805 REMARK 3 S31: 0.1965 S32: 0.0197 S33: 0.0674 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 189 A 218 REMARK 3 ORIGIN FOR THE GROUP (A): 2.3220 31.8570 39.7240 REMARK 3 T TENSOR REMARK 3 T11: 0.0373 T22: 0.0339 REMARK 3 T33: 0.0291 T12: -0.0003 REMARK 3 T13: 0.0017 T23: -0.0059 REMARK 3 L TENSOR REMARK 3 L11: 0.5719 L22: 0.9464 REMARK 3 L33: 0.9597 L12: -0.0681 REMARK 3 L13: 0.0348 L23: -0.3911 REMARK 3 S TENSOR REMARK 3 S11: 0.0014 S12: 0.0421 S13: -0.0404 REMARK 3 S21: -0.0463 S22: -0.0026 S23: 0.0358 REMARK 3 S31: 0.0701 S32: -0.0273 S33: 0.0012 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 219 A 233 REMARK 3 ORIGIN FOR THE GROUP (A): -2.8080 42.1780 47.3930 REMARK 3 T TENSOR REMARK 3 T11: 0.0504 T22: 0.0406 REMARK 3 T33: 0.0368 T12: 0.0118 REMARK 3 T13: 0.0013 T23: -0.0039 REMARK 3 L TENSOR REMARK 3 L11: 1.3263 L22: 1.3315 REMARK 3 L33: 1.6548 L12: -0.0659 REMARK 3 L13: 0.2008 L23: -0.6574 REMARK 3 S TENSOR REMARK 3 S11: 0.0074 S12: -0.0765 S13: 0.1406 REMARK 3 S21: 0.1204 S22: 0.0392 S23: 0.0351 REMARK 3 S31: -0.1675 S32: -0.1126 S33: -0.0465 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 234 A 240 REMARK 3 ORIGIN FOR THE GROUP (A): -2.7900 48.8060 38.0440 REMARK 3 T TENSOR REMARK 3 T11: 0.1033 T22: 0.0543 REMARK 3 T33: 0.0698 T12: 0.0119 REMARK 3 T13: -0.0152 T23: 0.0077 REMARK 3 L TENSOR REMARK 3 L11: 5.2406 L22: 0.6947 REMARK 3 L33: 3.6365 L12: 1.2188 REMARK 3 L13: 2.5290 L23: 1.5824 REMARK 3 S TENSOR REMARK 3 S11: -0.1611 S12: 0.0194 S13: 0.2949 REMARK 3 S21: -0.1267 S22: 0.0091 S23: 0.0669 REMARK 3 S31: -0.2887 S32: -0.0368 S33: 0.1521 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 241 A 252 REMARK 3 ORIGIN FOR THE GROUP (A): -7.1430 35.5690 35.6500 REMARK 3 T TENSOR REMARK 3 T11: 0.0298 T22: 0.0670 REMARK 3 T33: 0.0415 T12: -0.0111 REMARK 3 T13: -0.0037 T23: 0.0050 REMARK 3 L TENSOR REMARK 3 L11: 0.2341 L22: 1.5389 REMARK 3 L33: 1.8936 L12: -0.4752 REMARK 3 L13: 0.3009 L23: 0.2304 REMARK 3 S TENSOR REMARK 3 S11: 0.0160 S12: -0.0104 S13: -0.0454 REMARK 3 S21: -0.0649 S22: -0.0088 S23: 0.0872 REMARK 3 S31: 0.0010 S32: -0.1565 S33: -0.0072 REMARK 3 REMARK 3 TLS GROUP : 18 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 253 A 291 REMARK 3 ORIGIN FOR THE GROUP (A): -3.6090 30.2570 48.4120 REMARK 3 T TENSOR REMARK 3 T11: 0.0246 T22: 0.0476 REMARK 3 T33: 0.0407 T12: -0.0096 REMARK 3 T13: 0.0061 T23: 0.0090 REMARK 3 L TENSOR REMARK 3 L11: 0.2868 L22: 1.6566 REMARK 3 L33: 1.5179 L12: 0.0101 REMARK 3 L13: 0.2360 L23: 0.2346 REMARK 3 S TENSOR REMARK 3 S11: 0.0041 S12: -0.0160 S13: -0.0100 REMARK 3 S21: 0.0341 S22: 0.0116 S23: 0.0961 REMARK 3 S31: 0.0774 S32: -0.1487 S33: -0.0156 REMARK 3 REMARK 3 TLS GROUP : 19 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 292 A 301 REMARK 3 ORIGIN FOR THE GROUP (A): -10.1450 37.6490 45.4100 REMARK 3 T TENSOR REMARK 3 T11: 0.0099 T22: 0.0769 REMARK 3 T33: 0.0204 T12: 0.0096 REMARK 3 T13: 0.0010 T23: 0.0080 REMARK 3 L TENSOR REMARK 3 L11: 4.2412 L22: 3.9130 REMARK 3 L33: 3.0568 L12: -0.3937 REMARK 3 L13: -0.7492 L23: -1.5615 REMARK 3 S TENSOR REMARK 3 S11: -0.0324 S12: -0.0665 S13: -0.0462 REMARK 3 S21: 0.0808 S22: 0.0960 S23: 0.1119 REMARK 3 S31: -0.0761 S32: -0.2053 S33: -0.0636 REMARK 3 REMARK 3 TLS GROUP : 20 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 302 A 307 REMARK 3 ORIGIN FOR THE GROUP (A): -11.4990 49.1540 39.5640 REMARK 3 T TENSOR REMARK 3 T11: 0.3806 T22: 0.2789 REMARK 3 T33: 0.1682 T12: 0.2557 REMARK 3 T13: 0.0538 T23: 0.0846 REMARK 3 L TENSOR REMARK 3 L11: 9.3788 L22: 5.1554 REMARK 3 L33: 6.6376 L12: 0.6516 REMARK 3 L13: -7.6329 L23: -1.3455 REMARK 3 S TENSOR REMARK 3 S11: 0.4607 S12: -0.0751 S13: 0.7011 REMARK 3 S21: 0.3305 S22: 0.2287 S23: 0.3691 REMARK 3 S31: -0.7461 S32: -0.2457 S33: -0.6893 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3IOF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-AUG-09. REMARK 100 THE DEPOSITION ID IS D_1000054663. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JAN-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : ENRAF-NONIUS FR591 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : MIRROS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46231 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.436 REMARK 200 RESOLUTION RANGE LOW (A) : 19.630 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 11.60 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04100 REMARK 200 FOR THE DATA SET : 40.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.44 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.51 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.11200 REMARK 200 FOR SHELL : 16.30 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1X8G REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.4M (NH4)2SO4, 100MM MES, PH 6.0, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.49500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 58.49500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 21.32500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 50.33000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 21.32500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 50.33000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 58.49500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 21.32500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 50.33000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 58.49500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 21.32500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 50.33000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 O4 SO4 A 2 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 341 LIES ON A SPECIAL POSITION. REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 159 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS A 106 CD - CE - NZ ANGL. DEV. = -17.1 DEGREES REMARK 500 LYS A 159 CD - CE - NZ ANGL. DEV. = 14.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 60 -123.70 59.17 REMARK 500 THR A 86 172.41 75.30 REMARK 500 ALA A 195 -105.22 -156.48 REMARK 500 ASP A 264 -160.95 60.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 1 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 120 OD2 REMARK 620 2 CYS A 221 SG 107.0 REMARK 620 3 HIS A 263 NE2 91.0 116.6 REMARK 620 4 IFS A 308 S1 115.5 121.4 101.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IFS A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 6 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 7 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 8 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 9 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 10 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 310 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 311 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 312 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1X8G RELATED DB: PDB REMARK 900 WILD TYPE CRYSTAL STRUCTURE REMARK 900 RELATED ID: 1X8H RELATED DB: PDB REMARK 900 N220G MUTANT CRYSTAL STRUCTURE REMARK 900 RELATED ID: 1X8I RELATED DB: PDB REMARK 900 N220G MUTANT CRYSTAL STRUCTURE WITH ANTIBIOTIC BIAPENEM REMARK 900 RELATED ID: 3F9O RELATED DB: PDB REMARK 900 DI ZINC CRYSTAL STRUCTURE WILD TYPE REMARK 900 RELATED ID: 3FAI RELATED DB: PDB REMARK 900 DI ZINC CRYSTAL STRUCTURE N220G MUTANT REMARK 900 RELATED ID: 3IOG RELATED DB: PDB REMARK 900 N220G MUTANT CRYSTAL STRUCTURE WITH INHIBITOR 18 REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS COORDINATES USE NON-SEQUENTIAL RESIDUE NUMBERING. REMARK 999 THE NUMBERING RELATES TO PDB ENTRY 1X8G. DBREF 3IOF A 41 307 UNP P26918 BLAB_AERHY 28 254 SEQADV 3IOF GLY A 220 UNP P26918 ASN 192 ENGINEERED MUTATION SEQRES 1 A 227 ALA GLY MET SER LEU THR GLN VAL SER GLY PRO VAL TYR SEQRES 2 A 227 VAL VAL GLU ASP ASN TYR TYR VAL GLN GLU ASN SER MET SEQRES 3 A 227 VAL TYR PHE GLY ALA LYS GLY VAL THR VAL VAL GLY ALA SEQRES 4 A 227 THR TRP THR PRO ASP THR ALA ARG GLU LEU HIS LYS LEU SEQRES 5 A 227 ILE LYS ARG VAL SER ARG LYS PRO VAL LEU GLU VAL ILE SEQRES 6 A 227 ASN THR ASN TYR HIS THR ASP ARG ALA GLY GLY ASN ALA SEQRES 7 A 227 TYR TRP LYS SER ILE GLY ALA LYS VAL VAL SER THR ARG SEQRES 8 A 227 GLN THR ARG ASP LEU MET LYS SER ASP TRP ALA GLU ILE SEQRES 9 A 227 VAL ALA PHE THR ARG LYS GLY LEU PRO GLU TYR PRO ASP SEQRES 10 A 227 LEU PRO LEU VAL LEU PRO ASN VAL VAL HIS ASP GLY ASP SEQRES 11 A 227 PHE THR LEU GLN GLU GLY LYS VAL ARG ALA PHE TYR ALA SEQRES 12 A 227 GLY PRO ALA HIS THR PRO ASP GLY ILE PHE VAL TYR PHE SEQRES 13 A 227 PRO ASP GLU GLN VAL LEU TYR GLY GLY CYS ILE LEU LYS SEQRES 14 A 227 GLU LYS LEU GLY ASN LEU SER PHE ALA ASP VAL LYS ALA SEQRES 15 A 227 TYR PRO GLN THR LEU GLU ARG LEU LYS ALA MET LYS LEU SEQRES 16 A 227 PRO ILE LYS THR VAL ILE GLY GLY HIS ASP SER PRO LEU SEQRES 17 A 227 HIS GLY PRO GLU LEU ILE ASP HIS TYR GLU ALA LEU ILE SEQRES 18 A 227 LYS ALA ALA PRO GLN SER HET ZN A 1 1 HET IFS A 308 18 HET SO4 A 309 5 HET SO4 A 2 5 HET SO4 A 3 5 HET SO4 A 4 5 HET SO4 A 5 5 HET SO4 A 6 5 HET SO4 A 7 5 HET SO4 A 8 5 HET SO4 A 9 5 HET SO4 A 10 5 HET GOL A 310 6 HET GOL A 311 12 HET GOL A 312 12 HETNAM ZN ZINC ION HETNAM IFS BIS(1-METHYLETHYL) [2-(SULFANYLMETHYL) HETNAM 2 IFS PHENYL]PHOSPHONATE HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN IFS DIISOPROPYL 2-(SULFANYLMETHYL)PHENYLPHOSPHONATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 ZN ZN 2+ FORMUL 3 IFS C13 H21 O3 P S FORMUL 4 SO4 10(O4 S 2-) FORMUL 14 GOL 3(C3 H8 O3) FORMUL 17 HOH *290(H2 O) HELIX 1 1 THR A 88 SER A 104 1 16 HELIX 2 2 HIS A 118 GLY A 123 1 6 HELIX 3 3 GLY A 124 ILE A 131 1 8 HELIX 4 4 ARG A 140 LEU A 161 1 22 HELIX 5 5 GLY A 220 LEU A 223 5 4 HELIX 6 6 LYS A 240 MET A 252 1 13 HELIX 7 7 PRO A 291 ALA A 303 1 13 SHEET 1 A 7 MET A 43 SER A 49 0 SHEET 2 A 7 VAL A 52 ASP A 57 -1 O VAL A 54 N THR A 46 SHEET 3 A 7 GLU A 69 PHE A 75 -1 O SER A 71 N VAL A 55 SHEET 4 A 7 VAL A 80 VAL A 83 -1 O VAL A 83 N MET A 72 SHEET 5 A 7 VAL A 109 ILE A 113 1 O ILE A 113 N VAL A 82 SHEET 6 A 7 LYS A 135 THR A 139 1 O VAL A 137 N VAL A 112 SHEET 7 A 7 VAL A 174 HIS A 176 1 O HIS A 176 N SER A 138 SHEET 1 B 6 PHE A 180 LEU A 182 0 SHEET 2 B 6 VAL A 187 PHE A 190 -1 O ALA A 189 N PHE A 180 SHEET 3 B 6 PHE A 202 PHE A 205 -1 O TYR A 204 N ARG A 188 SHEET 4 B 6 VAL A 216 TYR A 218 -1 O TYR A 218 N VAL A 203 SHEET 5 B 6 THR A 258 ILE A 260 1 O ILE A 260 N LEU A 217 SHEET 6 B 6 LEU A 267 HIS A 289 -1 O HIS A 289 N VAL A 259 LINK ZN ZN A 1 OD2 ASP A 120 1555 1555 1.96 LINK ZN ZN A 1 SG CYS A 221 1555 1555 2.34 LINK ZN ZN A 1 NE2 HIS A 263 1555 1555 2.12 LINK ZN ZN A 1 S1 IFS A 308 1555 1555 2.31 SITE 1 AC1 4 ASP A 120 CYS A 221 HIS A 263 IFS A 308 SITE 1 AC2 13 ZN A 1 VAL A 67 THR A 119 ASP A 120 SITE 2 AC2 13 ILE A 153 PHE A 156 THR A 157 LEU A 161 SITE 3 AC2 13 HIS A 196 ASN A 233 HIS A 263 HOH A 333 SITE 4 AC2 13 HOH A 435 SITE 1 AC3 5 SER A 104 LYS A 106 HOH A 270 HOH A 332 SITE 2 AC3 5 HOH A 443 SITE 1 AC4 3 ARG A 143 LYS A 147 HOH A 508 SITE 1 AC5 4 HIS A 176 ASP A 177 GLY A 178 ASP A 179 SITE 1 AC6 4 HIS A 289 GLY A 290 GLU A 292 HOH A 395 SITE 1 AC7 6 LYS A 129 VAL A 170 LEU A 171 LYS A 302 SITE 2 AC7 6 HOH A 403 HOH A 432 SITE 1 AC8 6 HOH A 19 LYS A 97 ARG A 102 LYS A 257 SITE 2 AC8 6 HOH A 324 HOH A 442 SITE 1 AC9 7 ALA A 237 ASP A 238 VAL A 239 LYS A 240 SITE 2 AC9 7 GLN A 306 HOH A 337 HOH A 368 SITE 1 BC1 6 LYS A 226 LEU A 231 GLY A 232 HOH A 400 SITE 2 BC1 6 HOH A 413 HOH A 500 SITE 1 BC2 4 ARG A 140 HOH A 287 HOH A 394 HOH A 482 SITE 1 BC3 4 HOH A 66 ARG A 93 HOH A 208 HOH A 493 SITE 1 BC4 2 THR A 181 ARG A 188 SITE 1 BC5 10 HOH A 37 HOH A 61 LYS A 78 LEU A 182 SITE 2 BC5 10 GLN A 183 GLU A 184 HOH A 286 HOH A 357 SITE 3 BC5 10 HOH A 484 HOH A 505 SITE 1 BC6 7 HOH A 40 ASP A 179 ARG A 188 PHE A 190 SITE 2 BC6 7 TYR A 204 MET A 252 HOH A 276 CRYST1 42.650 100.660 116.990 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023447 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009934 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008548 0.00000