HEADER HYDROLASE 14-AUG-09 3IOQ TITLE CRYSTAL STRUCTURE OF THE CARICA CANDAMARCENSIS CYSTEINE PROTEASE TITLE 2 CMS1MS2 IN COMPLEX WITH E-64. COMPND MOL_ID: 1; COMPND 2 MOLECULE: CMS1MS2; COMPND 3 CHAIN: A SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CARICA CANDAMARCENSIS; SOURCE 3 ORGANISM_TAXID: 35926; SOURCE 4 OTHER_DETAILS: ISOLATED FROM CARICA CANDAMARCENSIS (VASCONCELLEA SOURCE 5 CUNDINAMARCENSIS) LATEX KEYWDS CARICACEAE, CYSTEINE PROTEASE, E-64, PAPAIN FAMILY, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.T.R.GOMES,R.D.TEIXEIRA,C.E.SALAS,R.A.P.NAGEM REVDAT 3 06-SEP-23 3IOQ 1 REMARK LINK REVDAT 2 01-NOV-17 3IOQ 1 REMARK REVDAT 1 16-FEB-10 3IOQ 0 JRNL AUTH M.T.R.GOMES,R.D.TEIXEIRA,C.E.SALAS,R.A.P.NAGEM JRNL TITL CRYSTAL STRUCTURE OF THE CARICA CANDAMARCENSIS CYSTEINE JRNL TITL 2 PROTEASE CMS1MS2 IN COMPLEX WITH E-64 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.T.R.GOMES,R.D.TEIXEIRA,H.A.L.RIBEIRO,A.P.TURCHETTI, REMARK 1 AUTH 2 C.F.JUNQUEIRA,M.T.P.LOPES,C.E.SALAS,R.A.P.NAGEM REMARK 1 TITL PURUFICATION, CRYSTALLIZATION AND PRELIMINARY X-RAY ANALYSIS REMARK 1 TITL 2 OF CMS1MS2: A CYSTEINE PROTEINASE FROM CARICA CANDAMARCENSIS REMARK 1 TITL 3 LATEX REMARK 1 REF ACTA CRYSTALLOGR.,SECT.F V. 64 492 2008 REMARK 1 REFN ESSN 1744-3091 REMARK 1 PMID 18540057 REMARK 2 REMARK 2 RESOLUTION. 1.87 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.87 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 62.60 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 27714 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.193 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1395 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.87 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.92 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1908 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.1910 REMARK 3 BIN FREE R VALUE SET COUNT : 92 REMARK 3 BIN FREE R VALUE : 0.2330 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1620 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 105 REMARK 3 SOLVENT ATOMS : 216 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.06000 REMARK 3 B22 (A**2) : 0.06000 REMARK 3 B33 (A**2) : -0.13000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.103 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.102 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.059 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.909 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1828 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2474 ; 1.301 ; 1.988 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 235 ; 5.637 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 83 ;33.985 ;22.892 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 286 ;12.412 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;16.584 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 249 ; 0.089 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1397 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 910 ; 0.222 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1226 ; 0.307 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 212 ; 0.148 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 45 ; 0.194 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 29 ; 0.208 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1120 ; 1.238 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1745 ; 1.458 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 808 ; 2.488 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 718 ; 3.659 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3IOQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-AUG-09. REMARK 100 THE DEPOSITION ID IS D_1000054674. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-OCT-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LNLS REMARK 200 BEAMLINE : W01B-MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.458 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : VERTICAL COLLIMATING MIRROR, REMARK 200 DCM, TOROIDAL FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27792 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.870 REMARK 200 RESOLUTION RANGE LOW (A) : 62.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 28.10 REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 45.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.87 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 27.80 REMARK 200 R MERGE FOR SHELL (I) : 0.25100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 17.00 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: MODEL PREDICTED BY SWISSMODEL USING THE PRIMARY REMARK 200 STRUCTURE OF CMS1MS2 AND THE STRUCTURES OF CARICAIN (PDBID 1MEG), REMARK 200 CHYMOPAPAIN (PDBID 1YAL) AND PAPAIN (PDBID 1PPN) REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM SULFATE, 25% PEG 4000, REMARK 280 PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.39300 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 36.81950 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 36.81950 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 29.69650 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 36.81950 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 36.81950 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 89.08950 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 36.81950 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 36.81950 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 29.69650 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 36.81950 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 36.81950 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 89.08950 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 59.39300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 A 401 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 86 71.10 -157.88 REMARK 500 ASP A 205 97.30 -163.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE E64 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 510 DBREF 3IOQ A 1 213 PDB 3IOQ 3IOQ 1 213 SEQRES 1 A 213 ILE PRO THR SER ILE ASP TRP ARG GLN LYS GLY ALA VAL SEQRES 2 A 213 THR PRO VAL ARG ASN GLN GLY GLY CYS GLY SER CYS TRP SEQRES 3 A 213 THR PHE SER SER VAL ALA ALA VAL GLU GLY ILE ASN LYS SEQRES 4 A 213 ILE VAL THR GLY GLN LEU LEU SER LEU SER GLU GLN GLU SEQRES 5 A 213 LEU LEU ASP CYS GLU ARG ARG SER TYR GLY CYS ARG GLY SEQRES 6 A 213 GLY PHE PRO LEU TYR ALA LEU GLN TYR VAL ALA ASN SER SEQRES 7 A 213 GLY ILE HIS LEU ARG GLN TYR TYR PRO TYR GLU GLY VAL SEQRES 8 A 213 GLN ARG GLN CYS ARG ALA SER GLN ALA LYS GLY PRO LYS SEQRES 9 A 213 VAL LYS THR ASP GLY VAL GLY ARG VAL PRO ARG ASN ASN SEQRES 10 A 213 GLU GLN ALA LEU ILE GLN ARG ILE ALA ILE GLN PRO VAL SEQRES 11 A 213 SER ILE VAL VAL GLU ALA LYS GLY ARG ALA PHE GLN ASN SEQRES 12 A 213 TYR ARG GLY GLY ILE PHE ALA GLY PRO CYS GLY THR SER SEQRES 13 A 213 ILE ASP HIS ALA VAL ALA ALA VAL GLY TYR GLY ASN ASP SEQRES 14 A 213 TYR ILE LEU ILE LYS ASN SER TRP GLY THR GLY TRP GLY SEQRES 15 A 213 GLU GLY GLY TYR ILE ARG ILE LYS ARG GLY SER GLY ASN SEQRES 16 A 213 PRO GLN GLY ALA CYS GLY VAL LEU SER ASP SER VAL PHE SEQRES 17 A 213 PRO THR LYS ASN ARG MODRES 3IOQ CYS A 25 CYS COVALENT HET E64 A 301 25 HET SO4 A 401 5 HET SO4 A 402 5 HET SO4 A 403 5 HET SO4 A 404 5 HET SO4 A 405 5 HET SO4 A 406 10 HET SO4 A 407 5 HET SO4 A 408 5 HET EDO A 501 4 HET EDO A 502 4 HET EDO A 503 4 HET EDO A 504 4 HET EDO A 505 4 HET EDO A 506 4 HET EDO A 507 4 HET EDO A 508 4 HET EDO A 509 4 HET EDO A 510 4 HETNAM E64 N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO- HETNAM 2 E64 BUTYL]-GUANIDINE HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 E64 C15 H30 N5 O5 1+ FORMUL 3 SO4 8(O4 S 2-) FORMUL 11 EDO 10(C2 H6 O2) FORMUL 21 HOH *216(H2 O) HELIX 1 1 ARG A 8 GLY A 11 5 4 HELIX 2 2 SER A 24 GLY A 43 1 20 HELIX 3 3 SER A 49 GLU A 57 1 9 HELIX 4 4 TYR A 61 GLY A 65 5 5 HELIX 5 5 PHE A 67 GLY A 79 1 13 HELIX 6 6 ARG A 83 TYR A 86 5 4 HELIX 7 7 ARG A 96 ALA A 100 5 5 HELIX 8 8 ASN A 117 ALA A 126 1 10 HELIX 9 9 GLY A 138 ASN A 143 1 6 HELIX 10 10 GLY A 198 VAL A 202 5 5 SHEET 1 A 3 ILE A 5 ASP A 6 0 SHEET 2 A 3 HIS A 159 GLY A 167 -1 O TYR A 166 N ILE A 5 SHEET 3 A 3 VAL A 130 VAL A 134 -1 N ILE A 132 O VAL A 161 SHEET 1 B 5 ILE A 5 ASP A 6 0 SHEET 2 B 5 HIS A 159 GLY A 167 -1 O TYR A 166 N ILE A 5 SHEET 3 B 5 TYR A 170 LYS A 174 -1 O LYS A 174 N ALA A 162 SHEET 4 B 5 TYR A 186 LYS A 190 -1 O ILE A 187 N ILE A 173 SHEET 5 B 5 ILE A 148 PHE A 149 1 N PHE A 149 O ARG A 188 SHEET 1 C 2 ILE A 80 HIS A 81 0 SHEET 2 C 2 LYS A 104 VAL A 105 -1 O VAL A 105 N ILE A 80 SHEET 1 D 2 GLY A 109 ARG A 112 0 SHEET 2 D 2 VAL A 207 THR A 210 -1 O PHE A 208 N GLY A 111 SSBOND 1 CYS A 22 CYS A 63 1555 1555 2.07 SSBOND 2 CYS A 56 CYS A 95 1555 1555 2.10 SSBOND 3 CYS A 153 CYS A 200 1555 1555 2.06 LINK SG CYS A 25 C2 E64 A 301 1555 1555 2.08 CISPEP 1 GLY A 151 PRO A 152 0 3.09 SITE 1 AC1 22 GLN A 19 GLY A 23 SER A 24 CYS A 25 SITE 2 AC1 22 TRP A 26 THR A 42 GLY A 43 TYR A 61 SITE 3 AC1 22 ARG A 64 GLY A 65 GLY A 66 PRO A 68 SITE 4 AC1 22 VAL A 133 ASP A 158 HIS A 159 ARG A 213 SITE 5 AC1 22 HOH A 268 HOH A 308 HOH A 356 SO4 A 406 SITE 6 AC1 22 HOH A 430 EDO A 506 SITE 1 AC2 5 PRO A 15 ARG A 17 SER A 47 ARG A 83 SITE 2 AC2 5 HOH A 261 SITE 1 AC3 9 ASN A 18 TYR A 85 PRO A 103 GLY A 178 SITE 2 AC3 9 THR A 179 GLY A 180 HOH A 254 HOH A 274 SITE 3 AC3 9 HOH A 309 SITE 1 AC4 5 ARG A 93 GLN A 94 ARG A 96 ASP A 169 SITE 2 AC4 5 LYS A 190 SITE 1 AC5 8 CYS A 56 GLU A 57 ARG A 58 ARG A 59 SITE 2 AC5 8 TYR A 74 ARG A 145 HOH A 300 HOH A 316 SITE 1 AC6 4 ARG A 83 PRO A 87 TYR A 88 EDO A 510 SITE 1 AC7 9 ARG A 8 TYR A 61 ARG A 64 GLU A 183 SITE 2 AC7 9 ARG A 188 HOH A 243 HOH A 264 E64 A 301 SITE 3 AC7 9 HOH A 328 SITE 1 AC8 9 PHE A 67 PRO A 68 LEU A 69 ASP A 205 SITE 2 AC8 9 HOH A 266 HOH A 332 HOH A 338 HOH A 364 SITE 3 AC8 9 HOH A 375 SITE 1 AC9 8 ARG A 124 ILE A 127 SER A 156 HOH A 319 SITE 2 AC9 8 HOH A 367 HOH A 390 HOH A 393 EDO A 503 SITE 1 BC1 7 TYR A 85 TYR A 86 PRO A 87 ARG A 96 SITE 2 BC1 7 GLN A 99 ALA A 100 HOH A 283 SITE 1 BC2 3 ARG A 58 ARG A 145 HOH A 423 SITE 1 BC3 6 ILE A 37 ILE A 127 SER A 156 ARG A 213 SITE 2 BC3 6 HOH A 246 SO4 A 408 SITE 1 BC4 1 ARG A 115 SITE 1 BC5 5 GLU A 135 LYS A 137 SER A 156 ASP A 158 SITE 2 BC5 5 ARG A 213 SITE 1 BC6 5 GLY A 21 GLY A 23 E64 A 301 HOH A 327 SITE 2 BC6 5 EDO A 507 SITE 1 BC7 2 TRP A 177 EDO A 506 SITE 1 BC8 4 GLN A 44 LEU A 46 PRO A 103 THR A 179 SITE 1 BC9 7 ARG A 17 GLU A 50 ARG A 83 HOH A 285 SITE 2 BC9 7 HOH A 298 SO4 A 405 HOH A 424 CRYST1 73.639 73.639 118.786 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013580 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013580 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008419 0.00000