HEADER METAL BINDING PROTEIN 20-AUG-09 3IQQ TITLE X-RAY STRUCTURE OF BOVINE TRTK12-CA(2+)-S100B COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN S100-B; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: S100 CALCIUM-BINDING PROTEIN B, S-100 PROTEIN SUBUNIT BETA, COMPND 5 S-100 PROTEIN BETA CHAIN; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: TRTK12 PEPTIDE, CAPZ PROTEIN; COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: BOVINE; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 GENE: S100B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET11B; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 OTHER_DETAILS: THE PEPTIDE WAS SYNTHESIZED USING SOLID-STATE PEPTIDE SOURCE 14 SYNTHESIS KEYWDS EF HAND, ALPHA HELICAL, METAL-BINDING, NUCLEUS, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.H.CHARPENTIER,D.J.WEBER,E.A.TOTH REVDAT 5 06-SEP-23 3IQQ 1 REMARK LINK REVDAT 4 01-NOV-17 3IQQ 1 REMARK REVDAT 3 13-JUL-11 3IQQ 1 VERSN REVDAT 2 09-MAR-10 3IQQ 1 JRNL REVDAT 1 02-FEB-10 3IQQ 0 JRNL AUTH T.H.CHARPENTIER,L.E.THOMPSON,M.A.LIRIANO,K.M.VARNEY, JRNL AUTH 2 P.T.WILDER,E.POZHARSKI,E.A.TOTH,D.J.WEBER JRNL TITL THE EFFECTS OF CAPZ PEPTIDE (TRTK-12) BINDING TO JRNL TITL 2 S100B-CA(2+) AS EXAMINED BY NMR AND X-RAY CRYSTALLOGRAPHY JRNL REF J.MOL.BIOL. V. 396 1227 2010 JRNL REFN ISSN 0022-2836 JRNL PMID 20053360 JRNL DOI 10.1016/J.JMB.2009.12.057 REMARK 2 REMARK 2 RESOLUTION. 2.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.01 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.69 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 6041 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.600 REMARK 3 FREE R VALUE TEST SET COUNT : 278 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.01 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.06 REMARK 3 REFLECTION IN BIN (WORKING SET) : 421 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.77 REMARK 3 BIN R VALUE (WORKING SET) : 0.2210 REMARK 3 BIN FREE R VALUE SET COUNT : 18 REMARK 3 BIN FREE R VALUE : 0.2720 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 794 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 34 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.66000 REMARK 3 B22 (A**2) : -2.92000 REMARK 3 B33 (A**2) : -0.74000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.264 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.207 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.153 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.561 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 806 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1078 ; 1.736 ; 1.946 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 96 ;11.490 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 42 ;30.471 ;26.429 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 159 ;18.283 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 1 ;18.653 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 119 ; 0.158 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 592 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 413 ; 0.260 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 544 ; 0.316 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 43 ; 0.191 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 10 ; 0.093 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 58 ; 0.339 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.335 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 500 ; 0.620 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 777 ; 1.021 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 339 ; 1.820 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 301 ; 2.855 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 5 REMARK 3 ORIGIN FOR THE GROUP (A): -3.4757 -5.5808 -2.3377 REMARK 3 T TENSOR REMARK 3 T11: -0.1751 T22: -0.0118 REMARK 3 T33: -0.0121 T12: -0.0330 REMARK 3 T13: 0.0064 T23: -0.0175 REMARK 3 L TENSOR REMARK 3 L11: 18.0581 L22: 56.8001 REMARK 3 L33: 12.8672 L12: -11.3357 REMARK 3 L13: 8.5112 L23: -15.1616 REMARK 3 S TENSOR REMARK 3 S11: -0.2313 S12: -1.1486 S13: 0.1111 REMARK 3 S21: -1.0544 S22: 0.4333 S23: 1.3676 REMARK 3 S31: -0.2023 S32: -0.6073 S33: -0.2020 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 6 A 16 REMARK 3 ORIGIN FOR THE GROUP (A): 1.6139 5.5271 -6.6694 REMARK 3 T TENSOR REMARK 3 T11: 0.0282 T22: -0.0157 REMARK 3 T33: -0.0281 T12: 0.0056 REMARK 3 T13: -0.0105 T23: -0.0083 REMARK 3 L TENSOR REMARK 3 L11: 4.0613 L22: 39.7633 REMARK 3 L33: 0.1829 L12: 7.4675 REMARK 3 L13: -0.6795 L23: -2.5914 REMARK 3 S TENSOR REMARK 3 S11: -0.2825 S12: 0.2079 S13: 0.1919 REMARK 3 S21: -1.4413 S22: 0.5243 S23: 0.3756 REMARK 3 S31: 0.0659 S32: -0.3412 S33: -0.2418 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 17 A 40 REMARK 3 ORIGIN FOR THE GROUP (A): 5.5375 16.2903 -5.0049 REMARK 3 T TENSOR REMARK 3 T11: -0.0835 T22: -0.0731 REMARK 3 T33: -0.0068 T12: 0.0273 REMARK 3 T13: -0.0232 T23: -0.0119 REMARK 3 L TENSOR REMARK 3 L11: 5.6022 L22: 3.2401 REMARK 3 L33: 2.4094 L12: 0.6013 REMARK 3 L13: -0.9240 L23: -0.1182 REMARK 3 S TENSOR REMARK 3 S11: 0.1111 S12: 0.2145 S13: 0.2173 REMARK 3 S21: -0.4867 S22: -0.0745 S23: 0.1105 REMARK 3 S31: -0.4436 S32: -0.0746 S33: -0.0366 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 41 A 63 REMARK 3 ORIGIN FOR THE GROUP (A): 10.2469 17.0525 5.4110 REMARK 3 T TENSOR REMARK 3 T11: -0.1124 T22: 0.0157 REMARK 3 T33: -0.0393 T12: -0.0031 REMARK 3 T13: -0.0494 T23: 0.0082 REMARK 3 L TENSOR REMARK 3 L11: 3.3201 L22: 5.5830 REMARK 3 L33: 3.3451 L12: 0.8722 REMARK 3 L13: -2.1077 L23: -0.5319 REMARK 3 S TENSOR REMARK 3 S11: 0.2596 S12: -0.4232 S13: 0.2685 REMARK 3 S21: 0.3230 S22: -0.0599 S23: -0.2284 REMARK 3 S31: -0.1670 S32: 0.1928 S33: -0.1996 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 64 A 78 REMARK 3 ORIGIN FOR THE GROUP (A): 12.7506 8.4735 -3.3928 REMARK 3 T TENSOR REMARK 3 T11: -0.1319 T22: -0.0771 REMARK 3 T33: -0.0025 T12: -0.0144 REMARK 3 T13: 0.0195 T23: -0.0033 REMARK 3 L TENSOR REMARK 3 L11: 5.0241 L22: 8.0337 REMARK 3 L33: 10.3636 L12: 3.9530 REMARK 3 L13: -3.9786 L23: -6.4290 REMARK 3 S TENSOR REMARK 3 S11: -0.1785 S12: 0.0693 S13: -0.0390 REMARK 3 S21: -0.4109 S22: 0.0815 S23: -0.2519 REMARK 3 S31: 0.1072 S32: 0.0235 S33: 0.0971 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 79 A 88 REMARK 3 ORIGIN FOR THE GROUP (A): 6.6269 1.1254 12.2754 REMARK 3 T TENSOR REMARK 3 T11: 0.1657 T22: 0.1686 REMARK 3 T33: 0.1251 T12: 0.0383 REMARK 3 T13: -0.0174 T23: -0.0372 REMARK 3 L TENSOR REMARK 3 L11: 21.4516 L22: 18.1146 REMARK 3 L33: 46.2780 L12: -2.0706 REMARK 3 L13: -9.8816 L23: 0.9015 REMARK 3 S TENSOR REMARK 3 S11: -0.7108 S12: -1.5322 S13: -1.0552 REMARK 3 S21: 1.9983 S22: 0.2069 S23: 0.0271 REMARK 3 S31: 1.3703 S32: -1.7834 S33: 0.5039 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 11 REMARK 3 ORIGIN FOR THE GROUP (A): 8.7728 11.3183 12.6097 REMARK 3 T TENSOR REMARK 3 T11: 0.4496 T22: 0.1591 REMARK 3 T33: 0.1435 T12: -0.0741 REMARK 3 T13: -0.0039 T23: -0.0662 REMARK 3 L TENSOR REMARK 3 L11: 61.4713 L22: 21.9877 REMARK 3 L33: 14.0859 L12: 12.1408 REMARK 3 L13: -15.3417 L23: -14.4683 REMARK 3 S TENSOR REMARK 3 S11: 0.0622 S12: 0.0569 S13: 0.6758 REMARK 3 S21: -0.0855 S22: -0.1730 S23: -0.7180 REMARK 3 S31: 0.2470 S32: 0.3785 S33: 0.1108 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3IQQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-AUG-09. REMARK 100 THE DEPOSITION ID IS D_1000054746. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-MAR-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 6057 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.010 REMARK 200 RESOLUTION RANGE LOW (A) : 35.690 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 12.70 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.01 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.1 REMARK 200 DATA REDUNDANCY IN SHELL : 12.90 REMARK 200 R MERGE FOR SHELL (I) : 0.20000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 1.3.3 REMARK 200 STARTING MODEL: PDB ENTRY 1MHO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 31.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 26% PEG3350, 7.5MM CACL2, 100MM REMARK 280 CACODYLATE BUFFER, PH 6.8, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 29.43000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 29.43000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 16.47550 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 44.88600 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 16.47550 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 44.88600 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 29.43000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 16.47550 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 44.88600 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 29.43000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 16.47550 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 44.88600 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 89 REMARK 465 HIS A 90 REMARK 465 GLU A 91 REMARK 465 THR B 1 REMARK 465 ARG B 2 REMARK 465 SER B 12 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU B 11 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 N THR B 3 CA THR B 3 3555 1.80 REMARK 500 N THR B 3 OG1 THR B 3 3555 1.90 REMARK 500 CA THR B 3 C THR B 3 3555 2.04 REMARK 500 CB THR B 3 OG1 THR B 3 3555 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 6 -165.22 -105.06 REMARK 500 ILE B 10 -128.32 74.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 HIS A 85 GLU A 86 37.65 REMARK 500 ILE B 5 ASP B 6 -137.02 REMARK 500 ASP B 6 TRP B 7 -59.08 REMARK 500 LYS B 9 ILE B 10 33.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 93 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 18 O REMARK 620 2 GLU A 21 O 97.6 REMARK 620 3 ASP A 23 O 81.8 87.7 REMARK 620 4 LYS A 26 O 88.0 161.5 75.6 REMARK 620 5 GLU A 31 OE1 93.5 117.3 155.0 79.6 REMARK 620 6 GLU A 31 OE2 71.8 75.2 145.9 123.2 50.7 REMARK 620 7 HOH A 104 O 170.9 88.3 91.5 84.3 90.0 116.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 92 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 61 OD1 REMARK 620 2 ASP A 63 OD1 87.9 REMARK 620 3 ASP A 65 OD1 87.8 86.3 REMARK 620 4 GLU A 67 O 82.0 164.9 82.1 REMARK 620 5 GLU A 72 OE1 113.9 117.0 147.4 77.6 REMARK 620 6 GLU A 72 OE2 93.7 70.4 156.6 121.3 51.0 REMARK 620 7 HOH A 98 O 167.7 87.2 80.7 100.4 78.3 95.3 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 92 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 93 DBREF 3IQQ A 0 91 UNP P02638 S100B_BOVIN 1 92 DBREF 3IQQ B 1 12 PDB 3IQQ 3IQQ 1 12 SEQRES 1 A 92 MET SER GLU LEU GLU LYS ALA VAL VAL ALA LEU ILE ASP SEQRES 2 A 92 VAL PHE HIS GLN TYR SER GLY ARG GLU GLY ASP LYS HIS SEQRES 3 A 92 LYS LEU LYS LYS SER GLU LEU LYS GLU LEU ILE ASN ASN SEQRES 4 A 92 GLU LEU SER HIS PHE LEU GLU GLU ILE LYS GLU GLN GLU SEQRES 5 A 92 VAL VAL ASP LYS VAL MET GLU THR LEU ASP SER ASP GLY SEQRES 6 A 92 ASP GLY GLU CYS ASP PHE GLN GLU PHE MET ALA PHE VAL SEQRES 7 A 92 ALA MET ILE THR THR ALA CYS HIS GLU PHE PHE GLU HIS SEQRES 8 A 92 GLU SEQRES 1 B 12 THR ARG THR LYS ILE ASP TRP ASN LYS ILE LEU SER HET CA A 92 1 HET CA A 93 1 HETNAM CA CALCIUM ION FORMUL 3 CA 2(CA 2+) FORMUL 5 HOH *34(H2 O) HELIX 1 1 SER A 1 GLY A 19 1 19 HELIX 2 2 LYS A 28 LEU A 40 1 13 HELIX 3 3 GLU A 49 ASP A 61 1 13 HELIX 4 4 PHE A 70 HIS A 85 1 16 SHEET 1 A 2 LYS A 26 LEU A 27 0 SHEET 2 A 2 CYS A 68 ASP A 69 -1 O CYS A 68 N LEU A 27 LINK O SER A 18 CA CA A 93 1555 1555 2.31 LINK O GLU A 21 CA CA A 93 1555 1555 2.35 LINK O ASP A 23 CA CA A 93 1555 1555 2.41 LINK O LYS A 26 CA CA A 93 1555 1555 2.43 LINK OE1 GLU A 31 CA CA A 93 1555 1555 2.38 LINK OE2 GLU A 31 CA CA A 93 1555 1555 2.67 LINK OD1 ASP A 61 CA CA A 92 1555 1555 2.23 LINK OD1 ASP A 63 CA CA A 92 1555 1555 2.36 LINK OD1 ASP A 65 CA CA A 92 1555 1555 2.38 LINK O GLU A 67 CA CA A 92 1555 1555 2.33 LINK OE1 GLU A 72 CA CA A 92 1555 1555 2.51 LINK OE2 GLU A 72 CA CA A 92 1555 1555 2.65 LINK CA CA A 92 O HOH A 98 1555 1555 2.41 LINK CA CA A 93 O HOH A 104 1555 1555 2.30 CISPEP 1 GLU A 86 PHE A 87 0 19.62 SITE 1 AC1 6 ASP A 61 ASP A 63 ASP A 65 GLU A 67 SITE 2 AC1 6 GLU A 72 HOH A 98 SITE 1 AC2 6 SER A 18 GLU A 21 ASP A 23 LYS A 26 SITE 2 AC2 6 GLU A 31 HOH A 104 CRYST1 32.951 89.772 58.860 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.030348 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011139 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016989 0.00000