HEADER FLUORESCENT PROTEIN 21-AUG-09 3IR8 TITLE RED FLUORESCENT PROTEIN MKEIMA AT PH 7.0 COMPND MOL_ID: 1; COMPND 2 MOLECULE: LARGE STOKES SHIFT FLUORESCENT PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MONTIPORA SP. 20; SOURCE 3 ORGANISM_TAXID: 321802; SOURCE 4 GENE: M-KEIMA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: TOP 10; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PBAD KEYWDS BETA BARREL, FLUORESCENT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.N.HENDERSON,M.F.OSBORN,N.KOON,R.GEPSHTEIN,D.HUPPERT,S.J.REMINGTON REVDAT 5 15-NOV-23 3IR8 1 LINK ATOM REVDAT 4 06-SEP-23 3IR8 1 SEQADV LINK REVDAT 3 01-NOV-17 3IR8 1 REMARK REVDAT 2 20-OCT-09 3IR8 1 JRNL REVDAT 1 08-SEP-09 3IR8 0 JRNL AUTH J.N.HENDERSON,M.F.OSBORN,N.KOON,R.GEPSHTEIN,D.HUPPERT, JRNL AUTH 2 S.J.REMINGTON JRNL TITL EXCITED STATE PROTON TRANSFER IN THE RED FLUORESCENT PROTEIN JRNL TITL 2 MKEIMA. JRNL REF J.AM.CHEM.SOC. V. 131 13212 2009 JRNL REFN ISSN 0002-7863 JRNL PMID 19708654 JRNL DOI 10.1021/JA904665X REMARK 2 REMARK 2 RESOLUTION. 1.63 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.63 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.18 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 53575 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2718 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.63 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3577 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.86 REMARK 3 BIN R VALUE (WORKING SET) : 0.2770 REMARK 3 BIN FREE R VALUE SET COUNT : 185 REMARK 3 BIN FREE R VALUE : 0.3490 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3375 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 306 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.104 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.106 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.067 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.950 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.937 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3512 ; 0.025 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4775 ; 2.414 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 441 ; 9.361 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 155 ;33.956 ;24.194 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 556 ;12.422 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;19.509 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 487 ; 0.177 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2747 ; 0.014 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2145 ; 1.324 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3481 ; 2.130 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1367 ; 3.270 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1288 ; 4.848 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3IR8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-AUG-09. REMARK 100 THE DEPOSITION ID IS D_1000054764. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-NOV-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : DOUBLE-CRYSTAL, SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53662 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.630 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 6.100 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.63 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.67 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.3 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : 0.50500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: EPMR 2.5 REMARK 200 STARTING MODEL: PDB ENTRY 1MOV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 26% PEG 3350, 0.2 M NACL, 0.1 M TRIS REMARK 280 PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 33.47950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.83700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.84300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 42.83700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.47950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.84300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -1 REMARK 465 SER A 0 REMARK 465 VAL A 1 REMARK 465 SER A 2 REMARK 465 LEU A 219 REMARK 465 LEU A 220 REMARK 465 GLY A 221 REMARK 465 SER B -1 REMARK 465 SER B 0 REMARK 465 VAL B 1 REMARK 465 LEU B 219 REMARK 465 LEU B 220 REMARK 465 GLY B 221 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 3 CG1 CG2 REMARK 470 LYS A 6 CD CE NZ REMARK 470 GLN A 7 CD OE1 NE2 REMARK 470 LYS A 32 NZ REMARK 470 GLU A 73 CD OE1 OE2 REMARK 470 LYS A 119 NZ REMARK 470 LYS A 135 CD CE NZ REMARK 470 ASP A 150 OD1 OD2 REMARK 470 GLU A 164 CG CD OE1 OE2 REMARK 470 LYS A 174 CD CE NZ REMARK 470 LYS A 178 NZ REMARK 470 ARG A 184 NE CZ NH1 NH2 REMARK 470 LYS B 11 CD CE NZ REMARK 470 LYS B 32 CD CE NZ REMARK 470 GLU B 35 CD OE1 OE2 REMARK 470 LYS B 46 CE NZ REMARK 470 LYS B 70 NZ REMARK 470 GLU B 73 CG CD OE1 OE2 REMARK 470 GLN B 110 CG CD OE1 NE2 REMARK 470 LYS B 119 CE NZ REMARK 470 GLU B 123 CG CD OE1 OE2 REMARK 470 LYS B 135 CE NZ REMARK 470 LYS B 178 CD CE NZ REMARK 470 ARG B 184 CD NE CZ NH1 NH2 REMARK 470 LYS B 194 CE NZ REMARK 470 ILE B 212 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 42 CB - CG - CD2 ANGL. DEV. = 11.5 DEGREES REMARK 500 ARG A 145 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 LEU B 61 CB - CG - CD2 ANGL. DEV. = 12.9 DEGREES REMARK 500 LEU B 61 CA - C - O ANGL. DEV. = -13.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 68 57.18 -92.00 REMARK 500 PHE B 68 52.45 -90.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLN A 60 -12.29 REMARK 500 GLN B 60 -10.00 REMARK 500 REMARK 500 REMARK: NULL DBREF 3IR8 A 1 221 UNP Q1JV70 Q1JV70_9CNID 2 222 DBREF 3IR8 B 1 221 UNP Q1JV70 Q1JV70_9CNID 2 222 SEQADV 3IR8 SER A -1 UNP Q1JV70 EXPRESSION TAG SEQADV 3IR8 SER A 0 UNP Q1JV70 EXPRESSION TAG SEQADV 3IR8 CRQ A 64 UNP Q1JV70 GLN 63 CHROMOPHORE SEQADV 3IR8 CRQ A 64 UNP Q1JV70 TYR 64 CHROMOPHORE SEQADV 3IR8 CRQ A 64 UNP Q1JV70 GLY 65 CHROMOPHORE SEQADV 3IR8 SER B -1 UNP Q1JV70 EXPRESSION TAG SEQADV 3IR8 SER B 0 UNP Q1JV70 EXPRESSION TAG SEQADV 3IR8 CRQ B 64 UNP Q1JV70 GLN 63 CHROMOPHORE SEQADV 3IR8 CRQ B 64 UNP Q1JV70 TYR 64 CHROMOPHORE SEQADV 3IR8 CRQ B 64 UNP Q1JV70 GLY 65 CHROMOPHORE SEQRES 1 A 221 SER SER VAL SER VAL ILE ALA LYS GLN MET THR TYR LYS SEQRES 2 A 221 VAL TYR MET SER GLY THR VAL ASN GLY HIS TYR PHE GLU SEQRES 3 A 221 VAL GLU GLY ASP GLY LYS GLY LYS PRO TYR GLU GLY GLU SEQRES 4 A 221 GLN THR VAL LYS LEU THR VAL THR LYS GLY GLY PRO LEU SEQRES 5 A 221 PRO PHE ALA TRP ASP ILE LEU SER PRO GLN LEU CRQ SER SEQRES 6 A 221 ILE PRO PHE THR LYS TYR PRO GLU ASP ILE PRO ASP TYR SEQRES 7 A 221 PHE LYS GLN SER PHE PRO GLU GLY TYR THR TRP GLU ARG SEQRES 8 A 221 SER MET ASN PHE GLU ASP GLY ALA VAL CYS THR VAL SER SEQRES 9 A 221 ASN ASP SER SER ILE GLN GLY ASN CYS PHE ILE TYR ASN SEQRES 10 A 221 VAL LYS ILE SER GLY GLU ASN PHE PRO PRO ASN GLY PRO SEQRES 11 A 221 VAL MET GLN LYS LYS THR GLN GLY TRP GLU PRO SER THR SEQRES 12 A 221 GLU ARG LEU PHE ALA ARG ASP GLY MET LEU ILE GLY ASN SEQRES 13 A 221 ASP TYR MET ALA LEU LYS LEU GLU GLY GLY GLY HIS TYR SEQRES 14 A 221 LEU CYS GLU PHE LYS SER THR TYR LYS ALA LYS LYS PRO SEQRES 15 A 221 VAL ARG MET PRO GLY ARG HIS GLU ILE ASP ARG LYS LEU SEQRES 16 A 221 ASP VAL THR SER HIS ASN ARG ASP TYR THR SER VAL GLU SEQRES 17 A 221 GLN CYS GLU ILE ALA ILE ALA ARG HIS SER LEU LEU GLY SEQRES 1 B 221 SER SER VAL SER VAL ILE ALA LYS GLN MET THR TYR LYS SEQRES 2 B 221 VAL TYR MET SER GLY THR VAL ASN GLY HIS TYR PHE GLU SEQRES 3 B 221 VAL GLU GLY ASP GLY LYS GLY LYS PRO TYR GLU GLY GLU SEQRES 4 B 221 GLN THR VAL LYS LEU THR VAL THR LYS GLY GLY PRO LEU SEQRES 5 B 221 PRO PHE ALA TRP ASP ILE LEU SER PRO GLN LEU CRQ SER SEQRES 6 B 221 ILE PRO PHE THR LYS TYR PRO GLU ASP ILE PRO ASP TYR SEQRES 7 B 221 PHE LYS GLN SER PHE PRO GLU GLY TYR THR TRP GLU ARG SEQRES 8 B 221 SER MET ASN PHE GLU ASP GLY ALA VAL CYS THR VAL SER SEQRES 9 B 221 ASN ASP SER SER ILE GLN GLY ASN CYS PHE ILE TYR ASN SEQRES 10 B 221 VAL LYS ILE SER GLY GLU ASN PHE PRO PRO ASN GLY PRO SEQRES 11 B 221 VAL MET GLN LYS LYS THR GLN GLY TRP GLU PRO SER THR SEQRES 12 B 221 GLU ARG LEU PHE ALA ARG ASP GLY MET LEU ILE GLY ASN SEQRES 13 B 221 ASP TYR MET ALA LEU LYS LEU GLU GLY GLY GLY HIS TYR SEQRES 14 B 221 LEU CYS GLU PHE LYS SER THR TYR LYS ALA LYS LYS PRO SEQRES 15 B 221 VAL ARG MET PRO GLY ARG HIS GLU ILE ASP ARG LYS LEU SEQRES 16 B 221 ASP VAL THR SER HIS ASN ARG ASP TYR THR SER VAL GLU SEQRES 17 B 221 GLN CYS GLU ILE ALA ILE ALA ARG HIS SER LEU LEU GLY MODRES 3IR8 CRQ A 64 GLN MODRES 3IR8 CRQ A 64 TYR MODRES 3IR8 CRQ A 64 GLY MODRES 3IR8 CRQ B 64 GLN MODRES 3IR8 CRQ B 64 TYR MODRES 3IR8 CRQ B 64 GLY HET CRQ A 64 24 HET CRQ B 64 24 HETNAM CRQ [2-(3-CARBAMOYL-1-IMINO-PROPYL)-4-(4-HYDROXY- HETNAM 2 CRQ BENZYLIDENE)-5-OXO-4,5-DIHYDRO-IMIDAZOL-1-YL]-ACETIC HETNAM 3 CRQ ACID HETSYN CRQ CHROMOPHORE (GLN-TYR-GLY) FORMUL 1 CRQ 2(C16 H16 N4 O5) FORMUL 3 HOH *306(H2 O) HELIX 1 1 ALA A 53 LEU A 61 5 9 HELIX 2 2 ASP A 77 SER A 82 1 6 HELIX 3 3 ALA B 53 LEU B 61 5 9 HELIX 4 4 ASP B 77 SER B 82 1 6 SHEET 1 A13 THR A 136 TRP A 139 0 SHEET 2 A13 MET A 152 LEU A 163 -1 O LYS A 162 N GLY A 138 SHEET 3 A13 HIS A 168 ALA A 179 -1 O PHE A 173 N ASP A 157 SHEET 4 A13 TYR A 87 PHE A 95 -1 N THR A 88 O LYS A 178 SHEET 5 A13 VAL A 100 GLN A 110 -1 O SER A 107 N TYR A 87 SHEET 6 A13 CYS A 113 GLU A 123 -1 O ILE A 115 N SER A 108 SHEET 7 A13 MET A 8 VAL A 18 1 N THR A 17 O GLY A 122 SHEET 8 A13 HIS A 21 LYS A 32 -1 O VAL A 25 N MET A 14 SHEET 9 A13 GLU A 37 LYS A 46 -1 O LYS A 41 N ASP A 28 SHEET 10 A13 SER A 206 ARG A 216 -1 O VAL A 207 N LEU A 42 SHEET 11 A13 HIS A 189 HIS A 200 -1 N ASP A 192 O ILE A 214 SHEET 12 A13 SER A 142 ARG A 149 -1 N SER A 142 O ARG A 193 SHEET 13 A13 MET A 152 LEU A 163 -1 O ILE A 154 N PHE A 147 SHEET 1 B13 THR B 136 TRP B 139 0 SHEET 2 B13 MET B 152 LEU B 163 -1 O LYS B 162 N GLN B 137 SHEET 3 B13 HIS B 168 ALA B 179 -1 O SER B 175 N GLY B 155 SHEET 4 B13 TYR B 87 PHE B 95 -1 N ASN B 94 O GLU B 172 SHEET 5 B13 VAL B 100 GLN B 110 -1 O CYS B 101 N MET B 93 SHEET 6 B13 CYS B 113 GLY B 122 -1 O ILE B 115 N SER B 108 SHEET 7 B13 MET B 8 VAL B 18 1 N TYR B 13 O VAL B 118 SHEET 8 B13 HIS B 21 LYS B 32 -1 O GLY B 29 N TYR B 10 SHEET 9 B13 GLU B 37 LYS B 46 -1 O THR B 43 N GLU B 26 SHEET 10 B13 SER B 206 HIS B 217 -1 O VAL B 207 N LEU B 42 SHEET 11 B13 HIS B 189 HIS B 200 -1 N ASP B 196 O CYS B 210 SHEET 12 B13 SER B 142 ARG B 149 -1 N SER B 142 O ARG B 193 SHEET 13 B13 MET B 152 LEU B 163 -1 O ASN B 156 N ARG B 145 LINK C LEU A 61 N1 CRQ A 64 1555 1555 1.29 LINK C3 CRQ A 64 N SER A 65 1555 1555 1.31 LINK C LEU B 61 N1 CRQ B 64 1555 1555 1.29 LINK C3 CRQ B 64 N SER B 65 1555 1555 1.32 CISPEP 1 GLY A 48 PRO A 49 0 -4.88 CISPEP 2 PHE A 83 PRO A 84 0 8.03 CISPEP 3 GLY B 48 PRO B 49 0 -5.95 CISPEP 4 PHE B 83 PRO B 84 0 8.05 CRYST1 66.959 75.686 85.674 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014935 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013212 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011672 0.00000