HEADER CELL ADHESION 24-AUG-09 3IS1 TITLE CRYSTAL STRUCTURE OF FUNCTIONAL REGION OF UAFA FROM STAPHYLOCOCCUS TITLE 2 SAPROPHYTICUS IN C2 FORM AT 2.45 ANGSTROM RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: URO-ADHERENCE FACTOR A; COMPND 3 CHAIN: X; COMPND 4 FRAGMENT: FUNCTIONAL REGION, RESIDUES 376-811; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS SAPROPHYTICUS SUBSP. SOURCE 3 SAPROPHYTICUS; SOURCE 4 ORGANISM_TAXID: 342451; SOURCE 5 STRAIN: ATCC 15305; SOURCE 6 GENE: SSP0135, UAFA; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: B834(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET28B KEYWDS DEV-IGG FOLD, CELL WALL, HEMAGGLUTININ, PEPTIDOGLYCAN-ANCHOR, KEYWDS 2 SECRETED, VIRULENCE, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR Y.TANAKA,E.MATSUOKA,Y.SHOUJI,M.KURODA,I.TANAKA,M.YAO REVDAT 5 20-MAR-24 3IS1 1 REMARK SEQADV REVDAT 4 23-OCT-13 3IS1 1 JRNL VERSN REVDAT 3 09-FEB-11 3IS1 1 JRNL REVDAT 2 29-DEC-10 3IS1 1 JRNL REVDAT 1 08-SEP-10 3IS1 0 JRNL AUTH E.MATSUOKA,Y.TANAKA,M.KURODA,Y.SHOUJI,T.OHTA,I.TANAKA,M.YAO JRNL TITL CRYSTAL STRUCTURE OF THE FUNCTIONAL REGION OF URO-ADHERENCE JRNL TITL 2 FACTOR A FROM STAPHYLOCOCCUS SAPROPHYTICUS REVEALS JRNL TITL 3 PARTICIPATION OF THE B DOMAIN IN LIGAND BINDING JRNL REF PROTEIN SCI. V. 20 406 2011 JRNL REFN ISSN 0961-8368 JRNL PMID 21280131 JRNL DOI 10.1002/PRO.573 REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.83 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 17271 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1328 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.45 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.52 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1116 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2710 REMARK 3 BIN FREE R VALUE SET COUNT : 101 REMARK 3 BIN FREE R VALUE : 0.3160 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3082 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 113 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.05000 REMARK 3 B22 (A**2) : -0.02000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.03000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.439 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.266 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.184 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 16.143 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.930 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.903 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3153 ; 0.006 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4281 ; 0.868 ; 1.934 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 389 ; 4.768 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 155 ;36.096 ;24.387 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 492 ;14.724 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;11.898 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 478 ; 0.057 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2432 ; 0.002 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1260 ; 0.162 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2156 ; 0.302 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 174 ; 0.085 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 52 ; 0.162 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 15 ; 0.060 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1984 ; 0.143 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3143 ; 0.256 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1322 ; 0.298 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1138 ; 0.501 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 392 X 545 REMARK 3 ORIGIN FOR THE GROUP (A): 36.0950 11.6320 10.0300 REMARK 3 T TENSOR REMARK 3 T11: -0.1473 T22: -0.0986 REMARK 3 T33: -0.1972 T12: -0.0440 REMARK 3 T13: -0.0532 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 2.2039 L22: 6.9808 REMARK 3 L33: 0.9759 L12: 1.7480 REMARK 3 L13: -0.6777 L23: -0.4820 REMARK 3 S TENSOR REMARK 3 S11: 0.2427 S12: -0.2841 S13: -0.0726 REMARK 3 S21: 0.3315 S22: -0.1935 S23: -0.2081 REMARK 3 S31: -0.0148 S32: 0.1067 S33: -0.0492 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 546 X 693 REMARK 3 ORIGIN FOR THE GROUP (A): 13.0360 -11.1790 14.0680 REMARK 3 T TENSOR REMARK 3 T11: -0.0251 T22: -0.0931 REMARK 3 T33: -0.0816 T12: -0.1190 REMARK 3 T13: 0.0685 T23: -0.0554 REMARK 3 L TENSOR REMARK 3 L11: 2.3747 L22: 4.1830 REMARK 3 L33: 3.4388 L12: 0.4028 REMARK 3 L13: -0.1992 L23: -0.3563 REMARK 3 S TENSOR REMARK 3 S11: 0.0083 S12: -0.0761 S13: 0.2272 REMARK 3 S21: 0.3910 S22: -0.1916 S23: 0.3874 REMARK 3 S31: 0.1965 S32: -0.3601 S33: 0.1833 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 4 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 694 X 705 REMARK 3 RESIDUE RANGE : X 717 X 768 REMARK 3 RESIDUE RANGE : X 780 X 795 REMARK 3 RESIDUE RANGE : X 799 X 809 REMARK 3 ORIGIN FOR THE GROUP (A): 18.1950 38.0690 8.2190 REMARK 3 T TENSOR REMARK 3 T11: -0.0149 T22: -0.0506 REMARK 3 T33: -0.0582 T12: -0.0159 REMARK 3 T13: 0.0856 T23: -0.0341 REMARK 3 L TENSOR REMARK 3 L11: 4.2322 L22: 5.5490 REMARK 3 L33: 7.7923 L12: -3.4539 REMARK 3 L13: 2.4008 L23: -4.0211 REMARK 3 S TENSOR REMARK 3 S11: -0.2467 S12: -0.2110 S13: -0.0006 REMARK 3 S21: 0.3230 S22: 0.4426 S23: 0.4325 REMARK 3 S31: -0.1199 S32: -0.8680 S33: -0.1959 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3IS1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-AUG-09. REMARK 100 THE DEPOSITION ID IS D_1000054793. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-NOV-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL32B2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU JUPITER 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18642 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06100 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.23000 REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: DM REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 300MM TRI-LITHIUM CITRATE, 20% PEG REMARK 280 3350, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 49.79250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 55.22100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 49.79250 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 55.22100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: X REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH X 74 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET X 374 REMARK 465 ALA X 375 REMARK 465 PHE X 376 REMARK 465 ARG X 377 REMARK 465 SER X 378 REMARK 465 ALA X 379 REMARK 465 ASN X 380 REMARK 465 THR X 381 REMARK 465 ARG X 382 REMARK 465 ALA X 383 REMARK 465 THR X 384 REMARK 465 ASN X 385 REMARK 465 VAL X 386 REMARK 465 VAL X 387 REMARK 465 ASN X 388 REMARK 465 TYR X 389 REMARK 465 ALA X 390 REMARK 465 ALA X 391 REMARK 465 LYS X 706 REMARK 465 ASN X 707 REMARK 465 ASN X 708 REMARK 465 ASP X 709 REMARK 465 GLY X 710 REMARK 465 VAL X 711 REMARK 465 GLN X 712 REMARK 465 ASN X 713 REMARK 465 ASP X 714 REMARK 465 SER X 715 REMARK 465 ASN X 716 REMARK 465 GLN X 769 REMARK 465 ALA X 770 REMARK 465 ASN X 771 REMARK 465 SER X 772 REMARK 465 THR X 773 REMARK 465 VAL X 774 REMARK 465 ASP X 775 REMARK 465 ASP X 776 REMARK 465 LYS X 777 REMARK 465 ASP X 778 REMARK 465 SER X 779 REMARK 465 ASP X 796 REMARK 465 ALA X 797 REMARK 465 ASP X 798 REMARK 465 THR X 810 REMARK 465 THR X 811 REMARK 465 LEU X 812 REMARK 465 GLU X 813 REMARK 465 HIS X 814 REMARK 465 HIS X 815 REMARK 465 HIS X 816 REMARK 465 HIS X 817 REMARK 465 HIS X 818 REMARK 465 HIS X 819 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP X 780 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR X 458 -103.81 -121.46 REMARK 500 ASN X 622 69.99 -112.91 REMARK 500 ASP X 740 -169.76 -77.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL X 1000 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3IRP RELATED DB: PDB REMARK 900 SAME PROTEIN OF WHICH N-TERMINAL 17 RESIDUES ARE DELETED REMARK 900 RELATED ID: 3IRZ RELATED DB: PDB REMARK 900 SAME PROTEIN OF WHICH N-TERMINAL 17 RESIDUES ARE DELETED REMARK 900 RELATED ID: 3IS0 RELATED DB: PDB REMARK 900 SAME PROTEIN OF WHICH N-TERMINAL 17 RESIDUES ARE DELETED DBREF 3IS1 X 376 811 UNP Q4A0V8 UAFA_STAS1 376 811 SEQADV 3IS1 MET X 374 UNP Q4A0V8 INITIATING METHIONINE SEQADV 3IS1 ALA X 375 UNP Q4A0V8 EXPRESSION TAG SEQADV 3IS1 LEU X 812 UNP Q4A0V8 EXPRESSION TAG SEQADV 3IS1 GLU X 813 UNP Q4A0V8 EXPRESSION TAG SEQADV 3IS1 HIS X 814 UNP Q4A0V8 EXPRESSION TAG SEQADV 3IS1 HIS X 815 UNP Q4A0V8 EXPRESSION TAG SEQADV 3IS1 HIS X 816 UNP Q4A0V8 EXPRESSION TAG SEQADV 3IS1 HIS X 817 UNP Q4A0V8 EXPRESSION TAG SEQADV 3IS1 HIS X 818 UNP Q4A0V8 EXPRESSION TAG SEQADV 3IS1 HIS X 819 UNP Q4A0V8 EXPRESSION TAG SEQRES 1 X 446 MET ALA PHE ARG SER ALA ASN THR ARG ALA THR ASN VAL SEQRES 2 X 446 VAL ASN TYR ALA ALA ASN GLN SER GLY ARG ASN VAL ASN SEQRES 3 X 446 HIS LEU VAL PHE ALA ASN THR SER TYR GLU ILE LEU GLY SEQRES 4 X 446 GLY GLY LYS LYS TYR ASN GLN VAL PHE MET THR MET ASP SEQRES 5 X 446 GLY LYS LEU LYS ILE LYS ILE ASP TYR THR VAL ASP ASP SEQRES 6 X 446 SER VAL VAL GLU GLY ASP TYR PHE THR VAL ASP PHE GLY SEQRES 7 X 446 LYS TYR ILE HIS PRO GLY THR SER ARG LYS PRO TYR ARG SEQRES 8 X 446 VAL ASN ASN ILE HIS ASP ALA ASN GLY ARG THR ILE ALA SEQRES 9 X 446 ILE GLY SER TYR ASP SER ALA THR ASN THR ALA LYS TYR SEQRES 10 X 446 THR PHE THR ASN TYR VAL ASP ILE TYR ASN ASN VAL ARG SEQRES 11 X 446 GLY SER PHE SER LEU LEU SER TRP PRO PHE LYS GLU LEU SEQRES 12 X 446 VAL THR THR ASP LYS GLN SER VAL PRO VAL GLY ILE THR SEQRES 13 X 446 VAL ALA GLY GLU ASP TYR THR GLN ASN VAL ILE PHE ASN SEQRES 14 X 446 TYR GLY ASN ARG THR VAL PRO VAL ILE SER ASP ILE ASN SEQRES 15 X 446 TYR LEU THR LYS ASP PHE ALA GLU PHE THR THR TYR ILE SEQRES 16 X 446 ASN GLN ASN ARG ALA PHE ASN THR GLY SER LYS VAL ARG SEQRES 17 X 446 LEU SER GLY GLN GLY PHE LYS PHE THR SER PRO ASP GLU SEQRES 18 X 446 ILE GLU VAL TYR LYS VAL LEU ASN ASN SER GLN PHE ARG SEQRES 19 X 446 ASP SER PHE SER PRO ASP TYR ALA ASN LEU THR GLN VAL SEQRES 20 X 446 ARG ASN PRO LYS ILE ILE ILE ASN SER ASP GLY SER ALA SEQRES 21 X 446 THR VAL ASP LEU GLY ASP ILE GLY THR LEU GLY TYR ILE SEQRES 22 X 446 ILE ARG SER LYS PRO ASN THR LEU PRO ASP PHE SER GLY SEQRES 23 X 446 ILE GLY VAL LEU LYS SER GLU TYR THR PHE THR ASN ASN SEQRES 24 X 446 LYS ASN GLN ARG ASP THR ARG ALA HIS ALA SER SER ILE SEQRES 25 X 446 GLN PHE VAL ARG ALA GLU LEU ALA GLY PHE GLY GLY PHE SEQRES 26 X 446 GLY GLY TYR VAL TRP PHE ASP LYS ASN ASN ASP GLY VAL SEQRES 27 X 446 GLN ASN ASP SER ASN ALA ALA ALA ALA GLY ILE THR VAL SEQRES 28 X 446 ASN LEU LEU ASP PRO THR GLY ILE ARG LEU ALA THR THR SEQRES 29 X 446 THR THR ASP ILE THR GLY HIS TYR ASN PHE ASP ASN LEU SEQRES 30 X 446 THR ASN GLY ASN TYR LEU VAL GLU PHE VAL MET PRO GLU SEQRES 31 X 446 GLY TYR ILE PRO THR GLN ALA ASN SER THR VAL ASP ASP SEQRES 32 X 446 LYS ASP SER ASP VAL VAL PHE GLU ASN GLY ARG TYR ILE SEQRES 33 X 446 ALA HIS VAL THR ILE LYS ASP ALA ASP ASN MET THR ILE SEQRES 34 X 446 ASP ALA GLY LEU VAL SER ASP THR THR LEU GLU HIS HIS SEQRES 35 X 446 HIS HIS HIS HIS HET GOL X1000 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL C3 H8 O3 FORMUL 3 HOH *113(H2 O) HELIX 1 1 VAL X 398 HIS X 400 5 3 HELIX 2 2 GLY X 414 TYR X 417 5 4 HELIX 3 3 ASN X 494 TYR X 499 1 6 HELIX 4 4 SER X 591 ASP X 593 5 3 HELIX 5 5 ASN X 602 PHE X 606 5 5 HELIX 6 6 ASP X 613 LEU X 617 5 5 HELIX 7 7 VAL X 688 LEU X 692 5 5 SHEET 1 A 4 VAL X 402 LEU X 411 0 SHEET 2 A 4 LYS X 427 VAL X 436 -1 O LYS X 427 N LEU X 411 SHEET 3 A 4 VAL X 502 PRO X 512 -1 O LEU X 508 N ILE X 430 SHEET 4 A 4 ILE X 454 PRO X 456 -1 N HIS X 455 O TRP X 511 SHEET 1 B 7 GLN X 419 PHE X 421 0 SHEET 2 B 7 GLU X 533 ASN X 542 1 O ILE X 540 N VAL X 420 SHEET 3 B 7 GLN X 522 VAL X 530 -1 N ILE X 528 O TYR X 535 SHEET 4 B 7 TYR X 445 ASP X 449 -1 N ASP X 449 O THR X 529 SHEET 5 B 7 THR X 487 PHE X 492 -1 O TYR X 490 N PHE X 446 SHEET 6 B 7 THR X 475 ASP X 482 -1 N ILE X 478 O THR X 491 SHEET 7 B 7 ILE X 468 HIS X 469 -1 N ILE X 468 O ALA X 477 SHEET 1 C 5 VAL X 550 LEU X 557 0 SHEET 2 C 5 ALA X 562 ILE X 568 -1 O TYR X 567 N ILE X 551 SHEET 3 C 5 TYR X 645 SER X 649 -1 O SER X 649 N PHE X 564 SHEET 4 C 5 ILE X 595 LYS X 599 -1 N TYR X 598 O ILE X 646 SHEET 5 C 5 THR X 618 GLN X 619 -1 O THR X 618 N LYS X 599 SHEET 1 D 5 LYS X 624 ILE X 627 0 SHEET 2 D 5 ALA X 633 GLY X 638 -1 O ASP X 636 N LYS X 624 SHEET 3 D 5 THR X 576 GLN X 585 -1 N VAL X 580 O VAL X 635 SHEET 4 D 5 ILE X 660 THR X 670 -1 O GLU X 666 N ARG X 581 SHEET 5 D 5 ARG X 676 GLN X 686 -1 O ARG X 679 N TYR X 667 SHEET 1 E 2 PHE X 587 LYS X 588 0 SHEET 2 E 2 ASN X 652 THR X 653 -1 O ASN X 652 N LYS X 588 SHEET 1 F 4 HIS X 744 LEU X 750 0 SHEET 2 F 4 GLY X 696 PHE X 704 -1 N GLY X 696 O LEU X 750 SHEET 3 F 4 ALA X 804 SER X 808 1 O LEU X 806 N TRP X 703 SHEET 4 F 4 TYR X 765 ILE X 766 -1 N ILE X 766 O VAL X 807 SHEET 1 G 3 HIS X 744 LEU X 750 0 SHEET 2 G 3 GLY X 696 PHE X 704 -1 N GLY X 696 O LEU X 750 SHEET 3 G 3 MET X 800 THR X 801 1 O MET X 800 N GLY X 699 SHEET 1 H 5 ARG X 733 THR X 738 0 SHEET 2 H 5 THR X 723 LEU X 727 -1 N LEU X 726 O LEU X 734 SHEET 3 H 5 GLY X 753 VAL X 760 -1 O LEU X 756 N LEU X 727 SHEET 4 H 5 ARG X 787 ILE X 794 -1 O ALA X 790 N VAL X 757 SHEET 5 H 5 VAL X 781 GLU X 784 -1 N VAL X 782 O ILE X 789 CISPEP 1 LYS X 461 PRO X 462 0 -1.06 SITE 1 AC1 9 HOH X 24 HOH X 43 HOH X 86 PHE X 421 SITE 2 AC1 9 MET X 422 THR X 423 MET X 424 ASN X 542 SITE 3 AC1 9 GLY X 544 CRYST1 99.585 110.442 49.547 90.00 106.49 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010042 0.000000 0.002973 0.00000 SCALE2 0.000000 0.009055 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021049 0.00000