HEADER TRANSCRIPTION 30-AUG-09 3IU5 TITLE CRYSTAL STRUCTURE OF THE FIRST BROMODOMAIN OF HUMAN POLY-BROMODOMAIN TITLE 2 CONTAINING PROTEIN 1 (PB1) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN POLYBROMO-1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: BROMO 1 DOMAIN: UNP RESIDUES 43-154; COMPND 5 SYNONYM: HPB1, POLYBROMO-1D, BRG1-ASSOCIATED FACTOR 180, BAF180; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PB1, PBRM1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-R3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 KEYWDS PB1, POLYBROMO 1 ISOFORM 1, BAF180, POLYBROMO0ID, PBRM1, BRG1- KEYWDS 2 ASSOCIATED FACTOR 180, STRUCTURAL GENOMICS, SGC, STRUCTURAL GENOMICS KEYWDS 3 CONSORTIUM, BROMODOMAIN, CHROMATIN REGULATOR, DNA-BINDING, NUCLEUS, KEYWDS 4 PHOSPHOPROTEIN, TRANSCRIPTION, TRANSCRIPTION REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR P.FILIPPAKOPOULOS,S.PICAUD,T.KEATES,E.UGOCHUKWU,F.VON DELFT, AUTHOR 2 C.H.ARROWSMITH,A.M.EDWARDS,J.WEIGELT,C.BOUNTRA,S.KNAPP,STRUCTURAL AUTHOR 3 GENOMICS CONSORTIUM (SGC) REVDAT 4 06-SEP-23 3IU5 1 SEQADV REVDAT 3 11-APR-12 3IU5 1 JRNL REVDAT 2 13-JUL-11 3IU5 1 VERSN REVDAT 1 22-SEP-09 3IU5 0 JRNL AUTH P.FILIPPAKOPOULOS,S.PICAUD,M.MANGOS,T.KEATES,J.P.LAMBERT, JRNL AUTH 2 D.BARSYTE-LOVEJOY,I.FELLETAR,R.VOLKMER,S.MULLER,T.PAWSON, JRNL AUTH 3 A.C.GINGRAS,C.H.ARROWSMITH,S.KNAPP JRNL TITL HISTONE RECOGNITION AND LARGE-SCALE STRUCTURAL ANALYSIS OF JRNL TITL 2 THE HUMAN BROMODOMAIN FAMILY. JRNL REF CELL(CAMBRIDGE,MASS.) V. 149 214 2012 JRNL REFN ISSN 0092-8674 JRNL PMID 22464331 JRNL DOI 10.1016/J.CELL.2012.02.013 REMARK 2 REMARK 2 RESOLUTION. 1.63 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.63 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 22255 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1147 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.63 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1487 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.60 REMARK 3 BIN R VALUE (WORKING SET) : 0.4730 REMARK 3 BIN FREE R VALUE SET COUNT : 74 REMARK 3 BIN FREE R VALUE : 0.5530 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 960 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 141 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 21.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.02 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.08000 REMARK 3 B22 (A**2) : 0.08000 REMARK 3 B33 (A**2) : -0.15000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.073 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.078 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.047 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.069 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1005 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 706 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1359 ; 1.448 ; 1.975 REMARK 3 BOND ANGLES OTHERS (DEGREES): 1723 ; 0.939 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 113 ; 4.460 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 55 ;33.687 ;24.545 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 193 ;13.159 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;18.250 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 147 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1082 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 200 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 579 ; 2.078 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 222 ; 0.633 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 948 ; 3.264 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 426 ; 5.829 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 411 ; 8.664 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 41 A 95 REMARK 3 ORIGIN FOR THE GROUP (A): -6.1974 48.6819 25.8096 REMARK 3 T TENSOR REMARK 3 T11: 0.0836 T22: 0.0527 REMARK 3 T33: 0.0576 T12: -0.0068 REMARK 3 T13: 0.0073 T23: -0.0159 REMARK 3 L TENSOR REMARK 3 L11: 1.9898 L22: 1.8468 REMARK 3 L33: 1.6964 L12: -0.8501 REMARK 3 L13: 0.7665 L23: -0.9568 REMARK 3 S TENSOR REMARK 3 S11: -0.0403 S12: -0.0516 S13: 0.0320 REMARK 3 S21: 0.1088 S22: 0.0906 S23: 0.1162 REMARK 3 S31: -0.0674 S32: -0.0757 S33: -0.0503 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 96 A 154 REMARK 3 ORIGIN FOR THE GROUP (A): -4.2356 43.1217 23.7818 REMARK 3 T TENSOR REMARK 3 T11: 0.0559 T22: 0.0193 REMARK 3 T33: 0.0469 T12: -0.0104 REMARK 3 T13: -0.0049 T23: -0.0271 REMARK 3 L TENSOR REMARK 3 L11: 2.3256 L22: 4.1280 REMARK 3 L33: 3.9327 L12: -1.4485 REMARK 3 L13: 1.3894 L23: -2.1533 REMARK 3 S TENSOR REMARK 3 S11: 0.0234 S12: 0.0236 S13: -0.0735 REMARK 3 S21: 0.0351 S22: -0.0183 S23: -0.0049 REMARK 3 S31: 0.1833 S32: -0.0555 S33: -0.0051 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. U VALUES: RESIDUAL ONLY. REMARK 4 REMARK 4 3IU5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-SEP-09. REMARK 100 THE DEPOSITION ID IS D_1000054867. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUN-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.9 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22262 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.630 REMARK 200 RESOLUTION RANGE LOW (A) : 34.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : 0.05800 REMARK 200 FOR THE DATA SET : 13.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.63 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.56300 REMARK 200 R SYM FOR SHELL (I) : 0.56300 REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.1.4 REMARK 200 STARTING MODEL: ENSEMBLE OF PDB ENTRIES 2NXB, 2OO1, 2OSS, 2OUO, REMARK 200 2RFJ, 3DAI, 3D7C, 3DWY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.1M NA MALATE, PH 7.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 20.13500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 10.06750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 30.20250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 155 REMARK 465 GLU A 156 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 154 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 200 O HOH A 216 1.92 REMARK 500 O HOH A 198 O HOH A 247 2.10 REMARK 500 O HOH A 196 O HOH A 197 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 69 CB CYS A 69 SG -0.108 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 81 71.72 -153.69 REMARK 500 REMARK 500 REMARK: NULL DBREF 3IU5 A 43 154 UNP Q86U86 PB1_HUMAN 43 154 SEQADV 3IU5 SER A 41 UNP Q86U86 EXPRESSION TAG SEQADV 3IU5 MET A 42 UNP Q86U86 EXPRESSION TAG SEQADV 3IU5 GLY A 155 UNP Q86U86 EXPRESSION TAG SEQADV 3IU5 GLU A 156 UNP Q86U86 EXPRESSION TAG SEQRES 1 A 116 SER MET THR VAL ASP PRO ILE ALA VAL CYS HIS GLU LEU SEQRES 2 A 116 TYR ASN THR ILE ARG ASP TYR LYS ASP GLU GLN GLY ARG SEQRES 3 A 116 LEU LEU CYS GLU LEU PHE ILE ARG ALA PRO LYS ARG ARG SEQRES 4 A 116 ASN GLN PRO ASP TYR TYR GLU VAL VAL SER GLN PRO ILE SEQRES 5 A 116 ASP LEU MET LYS ILE GLN GLN LYS LEU LYS MET GLU GLU SEQRES 6 A 116 TYR ASP ASP VAL ASN LEU LEU THR ALA ASP PHE GLN LEU SEQRES 7 A 116 LEU PHE ASN ASN ALA LYS SER TYR TYR LYS PRO ASP SER SEQRES 8 A 116 PRO GLU TYR LYS ALA ALA CYS LYS LEU TRP ASP LEU TYR SEQRES 9 A 116 LEU ARG THR ARG ASN GLU PHE VAL GLN LYS GLY GLU FORMUL 2 HOH *141(H2 O) HELIX 1 1 ASP A 45 TYR A 60 1 16 HELIX 2 2 LEU A 67 ILE A 73 5 7 HELIX 3 3 LYS A 77 ASN A 80 5 4 HELIX 4 4 GLN A 81 VAL A 88 1 8 HELIX 5 5 ASP A 93 MET A 103 1 11 HELIX 6 6 ASP A 108 TYR A 127 1 20 HELIX 7 7 SER A 131 GLN A 153 1 23 CRYST1 66.960 66.960 40.270 90.00 90.00 90.00 P 41 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014934 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014934 0.000000 0.00000 SCALE3 0.000000 0.000000 0.024832 0.00000 TER 984 LYS A 154 HETATM 985 O HOH A 1 -11.144 55.764 19.226 1.00 7.96 O HETATM 986 O HOH A 2 -10.149 53.472 22.500 1.00 7.99 O HETATM 987 O HOH A 3 -11.302 50.761 18.900 1.00 7.92 O HETATM 988 O HOH A 4 -18.199 60.656 18.619 1.00 2.44 O HETATM 989 O HOH A 5 -2.403 33.497 25.559 1.00 8.78 O HETATM 990 O HOH A 6 -8.605 56.353 19.976 1.00 9.01 O HETATM 991 O HOH A 7 -8.761 56.430 24.720 1.00 11.04 O HETATM 992 O HOH A 8 1.560 52.226 25.648 1.00 9.17 O HETATM 993 O HOH A 9 8.213 52.610 29.298 1.00 8.93 O HETATM 994 O HOH A 10 -10.191 50.684 22.982 1.00 13.81 O HETATM 995 O HOH A 11 -13.440 48.546 21.403 1.00 6.58 O HETATM 996 O HOH A 12 6.064 48.625 34.010 1.00 11.52 O HETATM 997 O HOH A 13 -14.251 57.671 16.696 1.00 5.09 O HETATM 998 O HOH A 14 -16.488 43.571 18.324 1.00 7.49 O HETATM 999 O HOH A 15 -21.680 61.666 25.939 1.00 5.45 O HETATM 1000 O HOH A 16 -2.668 30.593 31.628 1.00 7.81 O HETATM 1001 O HOH A 17 -12.803 57.304 23.289 1.00 14.27 O HETATM 1002 O HOH A 18 -2.783 32.299 39.252 1.00 7.87 O HETATM 1003 O HOH A 19 -10.497 49.125 20.906 1.00 11.68 O HETATM 1004 O HOH A 20 0.532 43.166 15.006 1.00 10.39 O HETATM 1005 O HOH A 21 -1.854 42.843 14.024 1.00 15.08 O HETATM 1006 O HOH A 22 7.414 61.106 26.065 1.00 6.67 O HETATM 1007 O HOH A 23 2.134 26.779 33.798 1.00 9.10 O HETATM 1008 O HOH A 24 -4.210 30.509 37.842 1.00 7.50 O HETATM 1009 O HOH A 25 -17.273 58.479 22.826 1.00 7.87 O HETATM 1010 O HOH A 26 -15.231 57.564 24.683 1.00 14.74 O HETATM 1011 O HOH A 27 4.661 53.734 17.086 1.00 14.63 O HETATM 1012 O HOH A 28 -16.899 58.853 20.175 1.00 5.43 O HETATM 1013 O HOH A 29 -11.455 53.204 20.100 1.00 9.67 O HETATM 1014 O HOH A 30 -12.399 57.640 20.729 1.00 12.14 O HETATM 1015 O HOH A 31 -4.517 32.579 23.834 1.00 12.10 O HETATM 1016 O HOH A 32 -13.227 42.740 16.582 1.00 12.02 O HETATM 1017 O HOH A 33 7.773 35.633 20.219 1.00 12.13 O HETATM 1018 O HOH A 34 5.670 45.745 18.367 1.00 10.06 O HETATM 1019 O HOH A 35 -5.412 53.999 5.382 1.00 12.91 O HETATM 1020 O HOH A 36 -11.360 37.088 28.063 1.00 13.20 O HETATM 1021 O HOH A 37 -6.546 39.376 37.412 1.00 13.71 O HETATM 1022 O HOH A 38 -10.866 37.847 21.269 1.00 11.64 O HETATM 1023 O HOH A 39 10.908 40.877 21.535 1.00 12.28 O HETATM 1024 O HOH A 40 9.109 36.785 22.297 1.00 10.04 O HETATM 1025 O HOH A 157 0.358 55.157 16.173 1.00 13.92 O HETATM 1026 O HOH A 158 5.166 33.038 36.726 1.00 16.78 O HETATM 1027 O HOH A 159 -0.384 50.330 9.023 1.00 17.12 O HETATM 1028 O HOH A 160 2.072 60.034 24.475 1.00 16.68 O HETATM 1029 O HOH A 161 2.434 53.090 16.149 1.00 18.53 O HETATM 1030 O HOH A 162 2.320 49.544 13.292 1.00 16.37 O HETATM 1031 O HOH A 163 -7.303 35.129 21.751 1.00 20.04 O HETATM 1032 O HOH A 164 -9.574 48.847 9.081 1.00 13.13 O HETATM 1033 O HOH A 165 -10.623 50.864 35.306 1.00 13.69 O HETATM 1034 O HOH A 166 -11.146 40.452 11.791 1.00 15.47 O HETATM 1035 O HOH A 167 6.387 63.139 27.395 1.00 15.84 O HETATM 1036 O HOH A 168 1.314 57.171 14.306 1.00 31.24 O HETATM 1037 O HOH A 169 15.293 53.041 18.725 1.00 29.64 O HETATM 1038 O HOH A 170 -6.921 33.597 23.956 1.00 12.68 O HETATM 1039 O HOH A 171 1.510 40.494 15.685 1.00 27.16 O HETATM 1040 O HOH A 172 -0.639 31.835 26.677 1.00 20.37 O HETATM 1041 O HOH A 173 -21.664 46.144 24.392 1.00 25.36 O HETATM 1042 O HOH A 174 -16.545 40.853 18.464 1.00 16.29 O HETATM 1043 O HOH A 175 5.732 55.128 30.727 1.00 18.82 O HETATM 1044 O HOH A 176 -24.530 52.063 14.385 1.00 21.22 O HETATM 1045 O HOH A 177 -22.489 47.028 17.450 1.00 13.28 O HETATM 1046 O HOH A 178 -18.783 52.301 9.657 1.00 20.47 O HETATM 1047 O HOH A 179 -24.574 50.807 19.327 1.00 20.76 O HETATM 1048 O HOH A 180 3.762 31.395 23.527 1.00 19.30 O HETATM 1049 O HOH A 181 1.017 31.055 24.281 1.00 23.83 O HETATM 1050 O HOH A 182 0.751 36.136 42.112 1.00 16.43 O HETATM 1051 O HOH A 183 10.490 34.494 23.546 1.00 16.15 O HETATM 1052 O HOH A 184 3.169 39.042 16.475 1.00 26.15 O HETATM 1053 O HOH A 185 10.532 38.191 20.406 1.00 20.02 O HETATM 1054 O HOH A 186 -12.262 39.891 17.819 1.00 22.68 O HETATM 1055 O HOH A 187 5.600 60.857 29.801 1.00 25.81 O HETATM 1056 O HOH A 188 -24.237 53.071 17.886 1.00 19.86 O HETATM 1057 O HOH A 189 0.684 48.885 11.054 1.00 22.08 O HETATM 1058 O HOH A 190 -15.850 58.502 27.140 1.00 24.31 O HETATM 1059 O HOH A 191 3.957 34.278 41.345 1.00 15.83 O HETATM 1060 O HOH A 192 -11.630 38.416 15.627 1.00 25.23 O HETATM 1061 O HOH A 193 -10.054 35.471 20.836 1.00 23.56 O HETATM 1062 O HOH A 194 -16.739 54.225 26.704 1.00 25.60 O HETATM 1063 O HOH A 195 9.089 52.873 17.903 1.00 22.28 O HETATM 1064 O HOH A 196 -20.460 43.993 13.766 1.00 26.54 O HETATM 1065 O HOH A 197 -22.003 45.345 14.404 1.00 24.38 O HETATM 1066 O HOH A 198 -9.176 58.719 26.913 1.00 21.58 O HETATM 1067 O HOH A 199 -3.718 48.712 37.876 1.00 34.18 O HETATM 1068 O HOH A 200 -2.696 50.675 36.490 1.00 27.14 O HETATM 1069 O HOH A 201 0.266 39.530 41.172 1.00 31.23 O HETATM 1070 O HOH A 202 1.343 48.263 39.094 1.00 33.70 O HETATM 1071 O HOH A 203 3.512 49.045 38.400 1.00 26.25 O HETATM 1072 O HOH A 204 2.011 54.656 31.771 1.00 19.45 O HETATM 1073 O HOH A 205 -2.646 56.993 31.214 1.00 33.08 O HETATM 1074 O HOH A 206 -0.174 27.979 34.556 1.00 21.60 O HETATM 1075 O HOH A 207 -3.951 38.897 36.792 1.00 21.03 O HETATM 1076 O HOH A 208 7.160 31.080 23.510 1.00 25.88 O HETATM 1077 O HOH A 209 10.504 37.774 31.185 1.00 30.57 O HETATM 1078 O HOH A 210 9.265 39.542 29.428 1.00 30.62 O HETATM 1079 O HOH A 211 10.406 40.741 27.815 1.00 20.61 O HETATM 1080 O HOH A 212 10.319 39.455 24.883 1.00 34.02 O HETATM 1081 O HOH A 213 -21.713 52.826 25.358 1.00 22.24 O HETATM 1082 O HOH A 214 8.415 32.083 20.746 1.00 24.54 O HETATM 1083 O HOH A 215 -5.468 35.525 20.082 1.00 20.28 O HETATM 1084 O HOH A 216 -3.695 51.355 34.996 1.00 23.38 O HETATM 1085 O HOH A 217 -12.590 37.261 30.618 1.00 23.48 O HETATM 1086 O HOH A 218 -14.353 40.485 27.907 1.00 21.25 O HETATM 1087 O HOH A 219 -12.601 38.751 24.774 1.00 26.79 O HETATM 1088 O HOH A 220 -15.266 42.617 28.587 1.00 40.71 O HETATM 1089 O HOH A 221 4.483 27.993 29.965 1.00 20.53 O HETATM 1090 O HOH A 222 -3.136 43.584 10.218 1.00 28.04 O HETATM 1091 O HOH A 223 -0.177 43.463 11.451 1.00 32.87 O HETATM 1092 O HOH A 224 3.670 51.615 14.016 1.00 28.64 O HETATM 1093 O HOH A 225 -0.346 57.981 11.545 1.00 25.63 O HETATM 1094 O HOH A 226 -9.882 30.724 34.682 1.00 16.86 O HETATM 1095 O HOH A 227 -10.001 29.913 32.022 1.00 19.15 O HETATM 1096 O HOH A 228 -5.543 28.827 34.379 1.00 30.43 O HETATM 1097 O HOH A 229 6.697 31.042 37.170 1.00 20.10 O HETATM 1098 O HOH A 230 9.590 31.698 37.970 1.00 26.89 O HETATM 1099 O HOH A 231 -15.836 40.499 30.403 1.00 30.28 O HETATM 1100 O HOH A 232 -12.329 34.837 26.764 1.00 18.01 O HETATM 1101 O HOH A 233 -10.132 32.740 26.365 1.00 26.77 O HETATM 1102 O HOH A 234 -11.287 33.580 22.519 1.00 31.87 O HETATM 1103 O HOH A 235 -14.827 32.032 20.188 1.00 38.49 O HETATM 1104 O HOH A 236 -13.318 37.762 22.702 1.00 31.85 O HETATM 1105 O HOH A 237 -12.948 38.995 13.696 1.00 30.00 O HETATM 1106 O HOH A 238 -15.595 43.418 14.780 1.00 27.12 O HETATM 1107 O HOH A 239 -13.555 42.741 12.210 1.00 25.87 O HETATM 1108 O HOH A 240 -14.626 46.264 9.284 1.00 28.29 O HETATM 1109 O HOH A 241 -5.804 53.811 37.732 1.00 30.08 O HETATM 1110 O HOH A 242 -16.375 41.482 33.397 1.00 28.23 O HETATM 1111 O HOH A 243 9.909 50.635 19.605 1.00 24.28 O HETATM 1112 O HOH A 244 12.783 50.027 18.789 1.00 30.99 O HETATM 1113 O HOH A 245 -4.369 61.033 21.725 1.00 38.20 O HETATM 1114 O HOH A 246 -6.295 59.633 23.325 1.00 28.94 O HETATM 1115 O HOH A 247 -9.068 59.140 28.968 1.00 35.78 O HETATM 1116 O HOH A 248 -7.076 58.501 31.547 1.00 30.45 O HETATM 1117 O HOH A 249 8.258 57.694 31.030 1.00 29.47 O HETATM 1118 O HOH A 250 3.772 55.565 13.126 1.00 31.37 O HETATM 1119 O HOH A 251 4.275 55.669 10.445 1.00 34.23 O HETATM 1120 O HOH A 252 4.534 42.676 13.312 1.00 29.04 O HETATM 1121 O HOH A 253 7.437 49.161 14.459 1.00 28.84 O HETATM 1122 O HOH A 254 -23.626 56.087 7.011 1.00 31.03 O HETATM 1123 O HOH A 255 -21.095 56.909 7.498 1.00 34.07 O HETATM 1124 O HOH A 256 -1.313 47.300 37.486 1.00 27.20 O HETATM 1125 O HOH A 257 -23.809 54.552 25.003 1.00 30.00 O MASTER 338 0 0 7 0 0 0 6 1101 1 0 9 END