data_3IV2 # _entry.id 3IV2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.350 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3IV2 pdb_00003iv2 10.2210/pdb3iv2/pdb RCSB RCSB054900 ? ? WWPDB D_1000054900 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3K24 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3IV2 _pdbx_database_status.recvd_initial_deposition_date 2009-08-31 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Adams-Cioaba, M.A.' 1 'Krupa, J.C.' 2 'Mort, J.S.' 3 'Bountra, C.' 4 'Weigelt, J.' 5 'Arrowsmith, C.H.' 6 'Edwards, A.M.' 7 'Bochkarev, A.' 8 'Min, J.' 9 # _citation.id primary _citation.title 'Structural basis for the recognition and cleavage of histone H3 by cathepsin L.' _citation.journal_abbrev 'Nat Commun' _citation.journal_volume 2 _citation.page_first 197 _citation.page_last 197 _citation.year 2011 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 2041-1723 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21326229 _citation.pdbx_database_id_DOI 10.1038/ncomms1204 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Adams-Cioaba, M.A.' 1 ? primary 'Krupa, J.C.' 2 ? primary 'Xu, C.' 3 ? primary 'Mort, J.S.' 4 ? primary 'Min, J.' 5 ? # _cell.entry_id 3IV2 _cell.length_a 61.959 _cell.length_b 61.959 _cell.length_c 206.288 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3IV2 _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Cathepsin L1' 24159.639 2 3.4.22.15 C138A 'Mature protein: UNP residues 114-333' ? 2 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 5 ? ? ? ? 4 non-polymer syn 'SULFATE ION' 96.063 4 ? ? ? ? 5 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 6 water nat water 18.015 78 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Major excreted protein, MEP, Cathepsin L1 heavy chain and Cathepsin L1 light chain' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;APRSVDWREKGYVTPVKNQGQCGSAWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDN GGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSED MDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV ; _entity_poly.pdbx_seq_one_letter_code_can ;APRSVDWREKGYVTPVKNQGQCGSAWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDN GGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSED MDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 PRO n 1 3 ARG n 1 4 SER n 1 5 VAL n 1 6 ASP n 1 7 TRP n 1 8 ARG n 1 9 GLU n 1 10 LYS n 1 11 GLY n 1 12 TYR n 1 13 VAL n 1 14 THR n 1 15 PRO n 1 16 VAL n 1 17 LYS n 1 18 ASN n 1 19 GLN n 1 20 GLY n 1 21 GLN n 1 22 CYS n 1 23 GLY n 1 24 SER n 1 25 ALA n 1 26 TRP n 1 27 ALA n 1 28 PHE n 1 29 SER n 1 30 ALA n 1 31 THR n 1 32 GLY n 1 33 ALA n 1 34 LEU n 1 35 GLU n 1 36 GLY n 1 37 GLN n 1 38 MET n 1 39 PHE n 1 40 ARG n 1 41 LYS n 1 42 THR n 1 43 GLY n 1 44 ARG n 1 45 LEU n 1 46 ILE n 1 47 SER n 1 48 LEU n 1 49 SER n 1 50 GLU n 1 51 GLN n 1 52 ASN n 1 53 LEU n 1 54 VAL n 1 55 ASP n 1 56 CYS n 1 57 SER n 1 58 GLY n 1 59 PRO n 1 60 GLN n 1 61 GLY n 1 62 ASN n 1 63 GLU n 1 64 GLY n 1 65 CYS n 1 66 ASN n 1 67 GLY n 1 68 GLY n 1 69 LEU n 1 70 MET n 1 71 ASP n 1 72 TYR n 1 73 ALA n 1 74 PHE n 1 75 GLN n 1 76 TYR n 1 77 VAL n 1 78 GLN n 1 79 ASP n 1 80 ASN n 1 81 GLY n 1 82 GLY n 1 83 LEU n 1 84 ASP n 1 85 SER n 1 86 GLU n 1 87 GLU n 1 88 SER n 1 89 TYR n 1 90 PRO n 1 91 TYR n 1 92 GLU n 1 93 ALA n 1 94 THR n 1 95 GLU n 1 96 GLU n 1 97 SER n 1 98 CYS n 1 99 LYS n 1 100 TYR n 1 101 ASN n 1 102 PRO n 1 103 LYS n 1 104 TYR n 1 105 SER n 1 106 VAL n 1 107 ALA n 1 108 ASN n 1 109 ASP n 1 110 THR n 1 111 GLY n 1 112 PHE n 1 113 VAL n 1 114 ASP n 1 115 ILE n 1 116 PRO n 1 117 LYS n 1 118 GLN n 1 119 GLU n 1 120 LYS n 1 121 ALA n 1 122 LEU n 1 123 MET n 1 124 LYS n 1 125 ALA n 1 126 VAL n 1 127 ALA n 1 128 THR n 1 129 VAL n 1 130 GLY n 1 131 PRO n 1 132 ILE n 1 133 SER n 1 134 VAL n 1 135 ALA n 1 136 ILE n 1 137 ASP n 1 138 ALA n 1 139 GLY n 1 140 HIS n 1 141 GLU n 1 142 SER n 1 143 PHE n 1 144 LEU n 1 145 PHE n 1 146 TYR n 1 147 LYS n 1 148 GLU n 1 149 GLY n 1 150 ILE n 1 151 TYR n 1 152 PHE n 1 153 GLU n 1 154 PRO n 1 155 ASP n 1 156 CYS n 1 157 SER n 1 158 SER n 1 159 GLU n 1 160 ASP n 1 161 MET n 1 162 ASP n 1 163 HIS n 1 164 GLY n 1 165 VAL n 1 166 LEU n 1 167 VAL n 1 168 VAL n 1 169 GLY n 1 170 TYR n 1 171 GLY n 1 172 PHE n 1 173 GLU n 1 174 SER n 1 175 THR n 1 176 GLU n 1 177 SER n 1 178 ASP n 1 179 ASN n 1 180 ASN n 1 181 LYS n 1 182 TYR n 1 183 TRP n 1 184 LEU n 1 185 VAL n 1 186 LYS n 1 187 ASN n 1 188 SER n 1 189 TRP n 1 190 GLY n 1 191 GLU n 1 192 GLU n 1 193 TRP n 1 194 GLY n 1 195 MET n 1 196 GLY n 1 197 GLY n 1 198 TYR n 1 199 VAL n 1 200 LYS n 1 201 MET n 1 202 ALA n 1 203 LYS n 1 204 ASP n 1 205 ARG n 1 206 ARG n 1 207 ASN n 1 208 HIS n 1 209 CYS n 1 210 GLY n 1 211 ILE n 1 212 ALA n 1 213 SER n 1 214 ALA n 1 215 ALA n 1 216 SER n 1 217 TYR n 1 218 PRO n 1 219 THR n 1 220 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'CTSL1, CTSL' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Pichia pastoris' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 4922 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CATL1_HUMAN _struct_ref.pdbx_db_accession P07711 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDN GGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSED MDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV ; _struct_ref.pdbx_align_begin 114 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3IV2 A 1 ? 220 ? P07711 114 ? 333 ? 1 220 2 1 3IV2 B 1 ? 220 ? P07711 114 ? 333 ? 1 220 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3IV2 ALA A 25 ? UNP P07711 CYS 138 'engineered mutation' 25 1 2 3IV2 ALA B 25 ? UNP P07711 CYS 138 'engineered mutation' 25 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3IV2 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.37 _exptl_crystal.density_percent_sol 48.00 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pdbx_details '0.2 M Ammonium sulfate, 0.1 M Sodium acetate trihydrate pH 4.6, 30% PEG MME 2000, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2009-04-06 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double crystal cryo-cooled Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0809 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 23-ID-B' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 23-ID-B _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0809 # _reflns.entry_id 3IV2 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 25.0 _reflns.d_resolution_high 2.20 _reflns.number_obs 24149 _reflns.number_all 24344 _reflns.percent_possible_obs 99.2 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.082 _reflns.pdbx_netI_over_sigmaI 20.9 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.28 _reflns_shell.percent_possible_all 99.4 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.550 _reflns_shell.meanI_over_sigI_obs 2.3 _reflns_shell.pdbx_redundancy 4.9 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2364 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3IV2 _refine.ls_number_reflns_obs 22916 _refine.ls_number_reflns_all 22916 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 25.0 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 99.29 _refine.ls_R_factor_obs 0.20419 _refine.ls_R_factor_all 0.20419 _refine.ls_R_factor_R_work 0.20210 _refine.ls_R_factor_R_free 0.24376 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1233 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.948 _refine.correlation_coeff_Fo_to_Fc_free 0.922 _refine.B_iso_mean 23.406 _refine.aniso_B[1][1] -0.14 _refine.aniso_B[2][2] -0.14 _refine.aniso_B[3][3] 0.21 _refine.aniso_B[1][2] -0.07 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.284 _refine.pdbx_overall_ESU_R_Free 0.214 _refine.overall_SU_ML 0.148 _refine.overall_SU_B 12.536 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3357 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 65 _refine_hist.number_atoms_solvent 78 _refine_hist.number_atoms_total 3500 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 25.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.005 0.022 ? 3502 'X-RAY DIFFRACTION' ? r_angle_refined_deg 0.703 1.953 ? 4734 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 9.274 5.000 ? 432 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.479 25.119 ? 168 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 19.097 15.000 ? 543 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 21.796 15.000 ? 12 'X-RAY DIFFRACTION' ? r_chiral_restr 0.063 0.200 ? 468 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.019 0.021 ? 2722 'X-RAY DIFFRACTION' ? r_mcbond_it 1.965 1.500 ? 2142 'X-RAY DIFFRACTION' ? r_mcangle_it 3.115 2.000 ? 3404 'X-RAY DIFFRACTION' ? r_scbond_it 4.931 3.000 ? 1360 'X-RAY DIFFRACTION' ? r_scangle_it 7.353 4.500 ? 1330 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso 1 B 1661 0.23 0.50 'medium positional' 1 1 'X-RAY DIFFRACTION' ? ? ? 1 A 1661 1.89 2.00 'medium thermal' 1 2 'X-RAY DIFFRACTION' ? ? ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.20 _refine_ls_shell.d_res_low 2.25 _refine_ls_shell.number_reflns_R_work 1671 _refine_ls_shell.R_factor_R_work 0.235 _refine_ls_shell.percent_reflns_obs 99.09 _refine_ls_shell.R_factor_R_free 0.248 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 65 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _struct_ncs_dom.id _struct_ncs_dom.details _struct_ncs_dom.pdbx_ens_id 1 B 1 2 A 1 # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 3IV2 _struct.title 'Crystal structure of mature apo-Cathepsin L C25A mutant' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3IV2 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'Protease, mutant, apo, Disulfide bond, Glycoprotein, Hydrolase, Lysosome, Thiol protease, Zymogen' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 4 ? G N N 4 ? H N N 5 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 4 ? M N N 4 ? N N N 6 ? O N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 24 ? GLY A 43 ? SER A 24 GLY A 43 1 ? 20 HELX_P HELX_P2 2 SER A 49 ? SER A 57 ? SER A 49 SER A 57 1 ? 9 HELX_P HELX_P3 3 GLY A 58 ? GLY A 61 ? GLY A 58 GLY A 61 5 ? 4 HELX_P HELX_P4 4 GLU A 63 ? GLY A 67 ? GLU A 63 GLY A 67 5 ? 5 HELX_P HELX_P5 5 LEU A 69 ? GLY A 81 ? LEU A 69 GLY A 81 1 ? 13 HELX_P HELX_P6 6 ASN A 101 ? LYS A 103 ? ASN A 101 LYS A 103 5 ? 3 HELX_P HELX_P7 7 GLN A 118 ? VAL A 129 ? GLN A 118 VAL A 129 1 ? 12 HELX_P HELX_P8 8 HIS A 140 ? PHE A 145 ? HIS A 140 PHE A 145 1 ? 6 HELX_P HELX_P9 9 SER A 157 ? MET A 161 ? SER A 157 MET A 161 5 ? 5 HELX_P HELX_P10 10 ARG B 8 ? GLY B 11 ? ARG B 8 GLY B 11 5 ? 4 HELX_P HELX_P11 11 SER B 24 ? GLY B 43 ? SER B 24 GLY B 43 1 ? 20 HELX_P HELX_P12 12 SER B 49 ? SER B 57 ? SER B 49 SER B 57 1 ? 9 HELX_P HELX_P13 13 GLY B 58 ? GLY B 61 ? GLY B 58 GLY B 61 5 ? 4 HELX_P HELX_P14 14 GLU B 63 ? GLY B 67 ? GLU B 63 GLY B 67 5 ? 5 HELX_P HELX_P15 15 LEU B 69 ? GLY B 81 ? LEU B 69 GLY B 81 1 ? 13 HELX_P HELX_P16 16 ASN B 101 ? LYS B 103 ? ASN B 101 LYS B 103 5 ? 3 HELX_P HELX_P17 17 GLN B 118 ? VAL B 129 ? GLN B 118 VAL B 129 1 ? 12 HELX_P HELX_P18 18 HIS B 140 ? PHE B 145 ? HIS B 140 PHE B 145 1 ? 6 HELX_P HELX_P19 19 SER B 157 ? MET B 161 ? SER B 157 MET B 161 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 22 SG ? ? ? 1_555 A CYS 65 SG ? ? A CYS 22 A CYS 65 1_555 ? ? ? ? ? ? ? 2.042 ? ? disulf2 disulf ? ? A CYS 56 SG ? ? ? 1_555 A CYS 98 SG ? ? A CYS 56 A CYS 98 1_555 ? ? ? ? ? ? ? 2.065 ? ? disulf3 disulf ? ? A CYS 156 SG ? ? ? 1_555 A CYS 209 SG ? ? A CYS 156 A CYS 209 1_555 ? ? ? ? ? ? ? 2.042 ? ? disulf4 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 65 SG ? ? B CYS 22 B CYS 65 1_555 ? ? ? ? ? ? ? 2.039 ? ? disulf5 disulf ? ? B CYS 56 SG ? ? ? 1_555 B CYS 98 SG ? ? B CYS 56 B CYS 98 1_555 ? ? ? ? ? ? ? 2.064 ? ? disulf6 disulf ? ? B CYS 156 SG ? ? ? 1_555 B CYS 209 SG ? ? B CYS 156 B CYS 209 1_555 ? ? ? ? ? ? ? 2.034 ? ? covale1 covale one ? A ASN 108 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 108 A NAG 301 1_555 ? ? ? ? ? ? ? 1.435 ? N-Glycosylation metalc1 metalc ? ? B ASP 55 O ? ? ? 1_555 H NA . NA ? ? B ASP 55 B NA 300 1_555 ? ? ? ? ? ? ? 2.600 ? ? metalc2 metalc ? ? B GLY 58 N ? ? ? 1_555 H NA . NA ? ? B GLY 58 B NA 300 1_555 ? ? ? ? ? ? ? 2.872 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 5 ? C ? 2 ? D ? 2 ? E ? 3 ? F ? 5 ? G ? 2 ? H ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel F 4 5 ? parallel G 1 2 ? anti-parallel H 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 5 ? ASP A 6 ? VAL A 5 ASP A 6 A 2 HIS A 163 ? PHE A 172 ? HIS A 163 PHE A 172 A 3 ILE A 132 ? ILE A 136 ? ILE A 132 ILE A 136 B 1 VAL A 5 ? ASP A 6 ? VAL A 5 ASP A 6 B 2 HIS A 163 ? PHE A 172 ? HIS A 163 PHE A 172 B 3 LYS A 181 ? LYS A 186 ? LYS A 181 LYS A 186 B 4 TYR A 198 ? ALA A 202 ? TYR A 198 ALA A 202 B 5 ILE A 150 ? TYR A 151 ? ILE A 150 TYR A 151 C 1 LEU A 83 ? ASP A 84 ? LEU A 83 ASP A 84 C 2 SER A 105 ? ALA A 107 ? SER A 105 ALA A 107 D 1 GLY A 111 ? ASP A 114 ? GLY A 111 ASP A 114 D 2 SER A 216 ? THR A 219 ? SER A 216 THR A 219 E 1 VAL B 5 ? ASP B 6 ? VAL B 5 ASP B 6 E 2 HIS B 163 ? PHE B 172 ? HIS B 163 PHE B 172 E 3 ILE B 132 ? ILE B 136 ? ILE B 132 ILE B 136 F 1 VAL B 5 ? ASP B 6 ? VAL B 5 ASP B 6 F 2 HIS B 163 ? PHE B 172 ? HIS B 163 PHE B 172 F 3 LYS B 181 ? LYS B 186 ? LYS B 181 LYS B 186 F 4 TYR B 198 ? ALA B 202 ? TYR B 198 ALA B 202 F 5 ILE B 150 ? TYR B 151 ? ILE B 150 TYR B 151 G 1 LEU B 83 ? ASP B 84 ? LEU B 83 ASP B 84 G 2 SER B 105 ? ALA B 107 ? SER B 105 ALA B 107 H 1 GLY B 111 ? ASP B 114 ? GLY B 111 ASP B 114 H 2 SER B 216 ? THR B 219 ? SER B 216 THR B 219 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 5 ? N VAL A 5 O TYR A 170 ? O TYR A 170 A 2 3 O VAL A 165 ? O VAL A 165 N VAL A 134 ? N VAL A 134 B 1 2 N VAL A 5 ? N VAL A 5 O TYR A 170 ? O TYR A 170 B 2 3 N LEU A 166 ? N LEU A 166 O LYS A 186 ? O LYS A 186 B 3 4 N VAL A 185 ? N VAL A 185 O VAL A 199 ? O VAL A 199 B 4 5 O LYS A 200 ? O LYS A 200 N TYR A 151 ? N TYR A 151 C 1 2 N LEU A 83 ? N LEU A 83 O VAL A 106 ? O VAL A 106 D 1 2 N VAL A 113 ? N VAL A 113 O TYR A 217 ? O TYR A 217 E 1 2 N VAL B 5 ? N VAL B 5 O TYR B 170 ? O TYR B 170 E 2 3 O HIS B 163 ? O HIS B 163 N ILE B 136 ? N ILE B 136 F 1 2 N VAL B 5 ? N VAL B 5 O TYR B 170 ? O TYR B 170 F 2 3 N LEU B 166 ? N LEU B 166 O LYS B 186 ? O LYS B 186 F 3 4 N TRP B 183 ? N TRP B 183 O MET B 201 ? O MET B 201 F 4 5 O LYS B 200 ? O LYS B 200 N TYR B 151 ? N TYR B 151 G 1 2 N LEU B 83 ? N LEU B 83 O VAL B 106 ? O VAL B 106 H 1 2 N VAL B 113 ? N VAL B 113 O TYR B 217 ? O TYR B 217 # _database_PDB_matrix.entry_id 3IV2 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3IV2 _atom_sites.fract_transf_matrix[1][1] 0.016140 _atom_sites.fract_transf_matrix[1][2] 0.009318 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018637 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004848 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 ? ? ? A . n A 1 2 PRO 2 2 2 PRO PRO A . n A 1 3 ARG 3 3 3 ARG ARG A . n A 1 4 SER 4 4 4 SER SER A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 ASP 6 6 6 ASP ASP A . n A 1 7 TRP 7 7 7 TRP TRP A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 GLU 9 9 9 GLU GLU A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 GLY 11 11 11 GLY GLY A . n A 1 12 TYR 12 12 12 TYR TYR A . n A 1 13 VAL 13 13 13 VAL VAL A . n A 1 14 THR 14 14 14 THR THR A . n A 1 15 PRO 15 15 15 PRO PRO A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 LYS 17 17 17 LYS LYS A . n A 1 18 ASN 18 18 18 ASN ASN A . n A 1 19 GLN 19 19 19 GLN GLN A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 GLN 21 21 21 GLN GLN A . n A 1 22 CYS 22 22 22 CYS CYS A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 TRP 26 26 26 TRP TRP A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 PHE 28 28 28 PHE PHE A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 GLY 32 32 32 GLY GLY A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 GLN 37 37 37 GLN GLN A . n A 1 38 MET 38 38 38 MET MET A . n A 1 39 PHE 39 39 39 PHE PHE A . n A 1 40 ARG 40 40 40 ARG ARG A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 THR 42 42 42 THR THR A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 ARG 44 44 44 ARG ARG A . n A 1 45 LEU 45 45 45 LEU LEU A . n A 1 46 ILE 46 46 46 ILE ILE A . n A 1 47 SER 47 47 47 SER SER A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 SER 49 49 49 SER SER A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 GLN 51 51 51 GLN GLN A . n A 1 52 ASN 52 52 52 ASN ASN A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 VAL 54 54 54 VAL VAL A . n A 1 55 ASP 55 55 55 ASP ASP A . n A 1 56 CYS 56 56 56 CYS CYS A . n A 1 57 SER 57 57 57 SER SER A . n A 1 58 GLY 58 58 58 GLY GLY A . n A 1 59 PRO 59 59 59 PRO PRO A . n A 1 60 GLN 60 60 60 GLN GLN A . n A 1 61 GLY 61 61 61 GLY GLY A . n A 1 62 ASN 62 62 62 ASN ASN A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 CYS 65 65 65 CYS CYS A . n A 1 66 ASN 66 66 66 ASN ASN A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 MET 70 70 70 MET MET A . n A 1 71 ASP 71 71 71 ASP ASP A . n A 1 72 TYR 72 72 72 TYR TYR A . n A 1 73 ALA 73 73 73 ALA ALA A . n A 1 74 PHE 74 74 74 PHE PHE A . n A 1 75 GLN 75 75 75 GLN GLN A . n A 1 76 TYR 76 76 76 TYR TYR A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 GLN 78 78 78 GLN GLN A . n A 1 79 ASP 79 79 79 ASP ASP A . n A 1 80 ASN 80 80 80 ASN ASN A . n A 1 81 GLY 81 81 81 GLY GLY A . n A 1 82 GLY 82 82 82 GLY GLY A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 ASP 84 84 84 ASP ASP A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 GLU 87 87 87 GLU GLU A . n A 1 88 SER 88 88 88 SER SER A . n A 1 89 TYR 89 89 89 TYR TYR A . n A 1 90 PRO 90 90 90 PRO PRO A . n A 1 91 TYR 91 91 91 TYR TYR A . n A 1 92 GLU 92 92 92 GLU GLU A . n A 1 93 ALA 93 93 93 ALA ALA A . n A 1 94 THR 94 94 94 THR THR A . n A 1 95 GLU 95 95 95 GLU GLU A . n A 1 96 GLU 96 96 96 GLU GLU A . n A 1 97 SER 97 97 97 SER SER A . n A 1 98 CYS 98 98 98 CYS CYS A . n A 1 99 LYS 99 99 99 LYS LYS A . n A 1 100 TYR 100 100 100 TYR TYR A . n A 1 101 ASN 101 101 101 ASN ASN A . n A 1 102 PRO 102 102 102 PRO PRO A . n A 1 103 LYS 103 103 103 LYS LYS A . n A 1 104 TYR 104 104 104 TYR TYR A . n A 1 105 SER 105 105 105 SER SER A . n A 1 106 VAL 106 106 106 VAL VAL A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 ASN 108 108 108 ASN ASN A . n A 1 109 ASP 109 109 109 ASP ASP A . n A 1 110 THR 110 110 110 THR THR A . n A 1 111 GLY 111 111 111 GLY GLY A . n A 1 112 PHE 112 112 112 PHE PHE A . n A 1 113 VAL 113 113 113 VAL VAL A . n A 1 114 ASP 114 114 114 ASP ASP A . n A 1 115 ILE 115 115 115 ILE ILE A . n A 1 116 PRO 116 116 116 PRO PRO A . n A 1 117 LYS 117 117 117 LYS LYS A . n A 1 118 GLN 118 118 118 GLN GLN A . n A 1 119 GLU 119 119 119 GLU GLU A . n A 1 120 LYS 120 120 120 LYS LYS A . n A 1 121 ALA 121 121 121 ALA ALA A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 MET 123 123 123 MET MET A . n A 1 124 LYS 124 124 124 LYS LYS A . n A 1 125 ALA 125 125 125 ALA ALA A . n A 1 126 VAL 126 126 126 VAL VAL A . n A 1 127 ALA 127 127 127 ALA ALA A . n A 1 128 THR 128 128 128 THR THR A . n A 1 129 VAL 129 129 129 VAL VAL A . n A 1 130 GLY 130 130 130 GLY GLY A . n A 1 131 PRO 131 131 131 PRO PRO A . n A 1 132 ILE 132 132 132 ILE ILE A . n A 1 133 SER 133 133 133 SER SER A . n A 1 134 VAL 134 134 134 VAL VAL A . n A 1 135 ALA 135 135 135 ALA ALA A . n A 1 136 ILE 136 136 136 ILE ILE A . n A 1 137 ASP 137 137 137 ASP ASP A . n A 1 138 ALA 138 138 138 ALA ALA A . n A 1 139 GLY 139 139 139 GLY GLY A . n A 1 140 HIS 140 140 140 HIS HIS A . n A 1 141 GLU 141 141 141 GLU GLU A . n A 1 142 SER 142 142 142 SER SER A . n A 1 143 PHE 143 143 143 PHE PHE A . n A 1 144 LEU 144 144 144 LEU LEU A . n A 1 145 PHE 145 145 145 PHE PHE A . n A 1 146 TYR 146 146 146 TYR TYR A . n A 1 147 LYS 147 147 147 LYS LYS A . n A 1 148 GLU 148 148 148 GLU GLU A . n A 1 149 GLY 149 149 149 GLY GLY A . n A 1 150 ILE 150 150 150 ILE ILE A . n A 1 151 TYR 151 151 151 TYR TYR A . n A 1 152 PHE 152 152 152 PHE PHE A . n A 1 153 GLU 153 153 153 GLU GLU A . n A 1 154 PRO 154 154 154 PRO PRO A . n A 1 155 ASP 155 155 155 ASP ASP A . n A 1 156 CYS 156 156 156 CYS CYS A . n A 1 157 SER 157 157 157 SER SER A . n A 1 158 SER 158 158 158 SER SER A . n A 1 159 GLU 159 159 159 GLU GLU A . n A 1 160 ASP 160 160 160 ASP ASP A . n A 1 161 MET 161 161 161 MET MET A . n A 1 162 ASP 162 162 162 ASP ASP A . n A 1 163 HIS 163 163 163 HIS HIS A . n A 1 164 GLY 164 164 164 GLY GLY A . n A 1 165 VAL 165 165 165 VAL VAL A . n A 1 166 LEU 166 166 166 LEU LEU A . n A 1 167 VAL 167 167 167 VAL VAL A . n A 1 168 VAL 168 168 168 VAL VAL A . n A 1 169 GLY 169 169 169 GLY GLY A . n A 1 170 TYR 170 170 170 TYR TYR A . n A 1 171 GLY 171 171 171 GLY GLY A . n A 1 172 PHE 172 172 172 PHE PHE A . n A 1 173 GLU 173 173 173 GLU GLU A . n A 1 174 SER 174 174 174 SER SER A . n A 1 175 THR 175 175 175 THR THR A . n A 1 176 GLU 176 176 176 GLU GLU A . n A 1 177 SER 177 177 177 SER SER A . n A 1 178 ASP 178 178 178 ASP ASP A . n A 1 179 ASN 179 179 179 ASN ASN A . n A 1 180 ASN 180 180 180 ASN ASN A . n A 1 181 LYS 181 181 181 LYS LYS A . n A 1 182 TYR 182 182 182 TYR TYR A . n A 1 183 TRP 183 183 183 TRP TRP A . n A 1 184 LEU 184 184 184 LEU LEU A . n A 1 185 VAL 185 185 185 VAL VAL A . n A 1 186 LYS 186 186 186 LYS LYS A . n A 1 187 ASN 187 187 187 ASN ASN A . n A 1 188 SER 188 188 188 SER SER A . n A 1 189 TRP 189 189 189 TRP TRP A . n A 1 190 GLY 190 190 190 GLY GLY A . n A 1 191 GLU 191 191 191 GLU GLU A . n A 1 192 GLU 192 192 192 GLU GLU A . n A 1 193 TRP 193 193 193 TRP TRP A . n A 1 194 GLY 194 194 194 GLY GLY A . n A 1 195 MET 195 195 195 MET MET A . n A 1 196 GLY 196 196 196 GLY GLY A . n A 1 197 GLY 197 197 197 GLY GLY A . n A 1 198 TYR 198 198 198 TYR TYR A . n A 1 199 VAL 199 199 199 VAL VAL A . n A 1 200 LYS 200 200 200 LYS LYS A . n A 1 201 MET 201 201 201 MET MET A . n A 1 202 ALA 202 202 202 ALA ALA A . n A 1 203 LYS 203 203 203 LYS LYS A . n A 1 204 ASP 204 204 204 ASP ASP A . n A 1 205 ARG 205 205 205 ARG ARG A . n A 1 206 ARG 206 206 206 ARG ARG A . n A 1 207 ASN 207 207 207 ASN ASN A . n A 1 208 HIS 208 208 208 HIS HIS A . n A 1 209 CYS 209 209 209 CYS CYS A . n A 1 210 GLY 210 210 210 GLY GLY A . n A 1 211 ILE 211 211 211 ILE ILE A . n A 1 212 ALA 212 212 212 ALA ALA A . n A 1 213 SER 213 213 213 SER SER A . n A 1 214 ALA 214 214 214 ALA ALA A . n A 1 215 ALA 215 215 215 ALA ALA A . n A 1 216 SER 216 216 216 SER SER A . n A 1 217 TYR 217 217 217 TYR TYR A . n A 1 218 PRO 218 218 218 PRO PRO A . n A 1 219 THR 219 219 219 THR THR A . n A 1 220 VAL 220 220 220 VAL VAL A . n B 1 1 ALA 1 1 1 ALA ALA B . n B 1 2 PRO 2 2 2 PRO PRO B . n B 1 3 ARG 3 3 3 ARG ARG B . n B 1 4 SER 4 4 4 SER SER B . n B 1 5 VAL 5 5 5 VAL VAL B . n B 1 6 ASP 6 6 6 ASP ASP B . n B 1 7 TRP 7 7 7 TRP TRP B . n B 1 8 ARG 8 8 8 ARG ARG B . n B 1 9 GLU 9 9 9 GLU GLU B . n B 1 10 LYS 10 10 10 LYS LYS B . n B 1 11 GLY 11 11 11 GLY GLY B . n B 1 12 TYR 12 12 12 TYR TYR B . n B 1 13 VAL 13 13 13 VAL VAL B . n B 1 14 THR 14 14 14 THR THR B . n B 1 15 PRO 15 15 15 PRO PRO B . n B 1 16 VAL 16 16 16 VAL VAL B . n B 1 17 LYS 17 17 17 LYS LYS B . n B 1 18 ASN 18 18 18 ASN ASN B . n B 1 19 GLN 19 19 19 GLN GLN B . n B 1 20 GLY 20 20 20 GLY GLY B . n B 1 21 GLN 21 21 21 GLN GLN B . n B 1 22 CYS 22 22 22 CYS CYS B . n B 1 23 GLY 23 23 23 GLY GLY B . n B 1 24 SER 24 24 24 SER SER B . n B 1 25 ALA 25 25 25 ALA ALA B . n B 1 26 TRP 26 26 26 TRP TRP B . n B 1 27 ALA 27 27 27 ALA ALA B . n B 1 28 PHE 28 28 28 PHE PHE B . n B 1 29 SER 29 29 29 SER SER B . n B 1 30 ALA 30 30 30 ALA ALA B . n B 1 31 THR 31 31 31 THR THR B . n B 1 32 GLY 32 32 32 GLY GLY B . n B 1 33 ALA 33 33 33 ALA ALA B . n B 1 34 LEU 34 34 34 LEU LEU B . n B 1 35 GLU 35 35 35 GLU GLU B . n B 1 36 GLY 36 36 36 GLY GLY B . n B 1 37 GLN 37 37 37 GLN GLN B . n B 1 38 MET 38 38 38 MET MET B . n B 1 39 PHE 39 39 39 PHE PHE B . n B 1 40 ARG 40 40 40 ARG ARG B . n B 1 41 LYS 41 41 41 LYS LYS B . n B 1 42 THR 42 42 42 THR THR B . n B 1 43 GLY 43 43 43 GLY GLY B . n B 1 44 ARG 44 44 44 ARG ARG B . n B 1 45 LEU 45 45 45 LEU LEU B . n B 1 46 ILE 46 46 46 ILE ILE B . n B 1 47 SER 47 47 47 SER SER B . n B 1 48 LEU 48 48 48 LEU LEU B . n B 1 49 SER 49 49 49 SER SER B . n B 1 50 GLU 50 50 50 GLU GLU B . n B 1 51 GLN 51 51 51 GLN GLN B . n B 1 52 ASN 52 52 52 ASN ASN B . n B 1 53 LEU 53 53 53 LEU LEU B . n B 1 54 VAL 54 54 54 VAL VAL B . n B 1 55 ASP 55 55 55 ASP ASP B . n B 1 56 CYS 56 56 56 CYS CYS B . n B 1 57 SER 57 57 57 SER SER B . n B 1 58 GLY 58 58 58 GLY GLY B . n B 1 59 PRO 59 59 59 PRO PRO B . n B 1 60 GLN 60 60 60 GLN GLN B . n B 1 61 GLY 61 61 61 GLY GLY B . n B 1 62 ASN 62 62 62 ASN ASN B . n B 1 63 GLU 63 63 63 GLU GLU B . n B 1 64 GLY 64 64 64 GLY GLY B . n B 1 65 CYS 65 65 65 CYS CYS B . n B 1 66 ASN 66 66 66 ASN ASN B . n B 1 67 GLY 67 67 67 GLY GLY B . n B 1 68 GLY 68 68 68 GLY GLY B . n B 1 69 LEU 69 69 69 LEU LEU B . n B 1 70 MET 70 70 70 MET MET B . n B 1 71 ASP 71 71 71 ASP ASP B . n B 1 72 TYR 72 72 72 TYR TYR B . n B 1 73 ALA 73 73 73 ALA ALA B . n B 1 74 PHE 74 74 74 PHE PHE B . n B 1 75 GLN 75 75 75 GLN GLN B . n B 1 76 TYR 76 76 76 TYR TYR B . n B 1 77 VAL 77 77 77 VAL VAL B . n B 1 78 GLN 78 78 78 GLN GLN B . n B 1 79 ASP 79 79 79 ASP ASP B . n B 1 80 ASN 80 80 80 ASN ASN B . n B 1 81 GLY 81 81 81 GLY GLY B . n B 1 82 GLY 82 82 82 GLY GLY B . n B 1 83 LEU 83 83 83 LEU LEU B . n B 1 84 ASP 84 84 84 ASP ASP B . n B 1 85 SER 85 85 85 SER SER B . n B 1 86 GLU 86 86 86 GLU GLU B . n B 1 87 GLU 87 87 87 GLU GLU B . n B 1 88 SER 88 88 88 SER SER B . n B 1 89 TYR 89 89 89 TYR TYR B . n B 1 90 PRO 90 90 90 PRO PRO B . n B 1 91 TYR 91 91 91 TYR TYR B . n B 1 92 GLU 92 92 92 GLU GLU B . n B 1 93 ALA 93 93 93 ALA ALA B . n B 1 94 THR 94 94 94 THR THR B . n B 1 95 GLU 95 95 95 GLU GLU B . n B 1 96 GLU 96 96 96 GLU GLU B . n B 1 97 SER 97 97 97 SER SER B . n B 1 98 CYS 98 98 98 CYS CYS B . n B 1 99 LYS 99 99 99 LYS LYS B . n B 1 100 TYR 100 100 100 TYR TYR B . n B 1 101 ASN 101 101 101 ASN ASN B . n B 1 102 PRO 102 102 102 PRO PRO B . n B 1 103 LYS 103 103 103 LYS LYS B . n B 1 104 TYR 104 104 104 TYR TYR B . n B 1 105 SER 105 105 105 SER SER B . n B 1 106 VAL 106 106 106 VAL VAL B . n B 1 107 ALA 107 107 107 ALA ALA B . n B 1 108 ASN 108 108 108 ASN ASN B . n B 1 109 ASP 109 109 109 ASP ASP B . n B 1 110 THR 110 110 110 THR THR B . n B 1 111 GLY 111 111 111 GLY GLY B . n B 1 112 PHE 112 112 112 PHE PHE B . n B 1 113 VAL 113 113 113 VAL VAL B . n B 1 114 ASP 114 114 114 ASP ASP B . n B 1 115 ILE 115 115 115 ILE ILE B . n B 1 116 PRO 116 116 116 PRO PRO B . n B 1 117 LYS 117 117 117 LYS LYS B . n B 1 118 GLN 118 118 118 GLN GLN B . n B 1 119 GLU 119 119 119 GLU GLU B . n B 1 120 LYS 120 120 120 LYS LYS B . n B 1 121 ALA 121 121 121 ALA ALA B . n B 1 122 LEU 122 122 122 LEU LEU B . n B 1 123 MET 123 123 123 MET MET B . n B 1 124 LYS 124 124 124 LYS LYS B . n B 1 125 ALA 125 125 125 ALA ALA B . n B 1 126 VAL 126 126 126 VAL VAL B . n B 1 127 ALA 127 127 127 ALA ALA B . n B 1 128 THR 128 128 128 THR THR B . n B 1 129 VAL 129 129 129 VAL VAL B . n B 1 130 GLY 130 130 130 GLY GLY B . n B 1 131 PRO 131 131 131 PRO PRO B . n B 1 132 ILE 132 132 132 ILE ILE B . n B 1 133 SER 133 133 133 SER SER B . n B 1 134 VAL 134 134 134 VAL VAL B . n B 1 135 ALA 135 135 135 ALA ALA B . n B 1 136 ILE 136 136 136 ILE ILE B . n B 1 137 ASP 137 137 137 ASP ASP B . n B 1 138 ALA 138 138 138 ALA ALA B . n B 1 139 GLY 139 139 139 GLY GLY B . n B 1 140 HIS 140 140 140 HIS HIS B . n B 1 141 GLU 141 141 141 GLU GLU B . n B 1 142 SER 142 142 142 SER SER B . n B 1 143 PHE 143 143 143 PHE PHE B . n B 1 144 LEU 144 144 144 LEU LEU B . n B 1 145 PHE 145 145 145 PHE PHE B . n B 1 146 TYR 146 146 146 TYR TYR B . n B 1 147 LYS 147 147 147 LYS LYS B . n B 1 148 GLU 148 148 148 GLU GLU B . n B 1 149 GLY 149 149 149 GLY GLY B . n B 1 150 ILE 150 150 150 ILE ILE B . n B 1 151 TYR 151 151 151 TYR TYR B . n B 1 152 PHE 152 152 152 PHE PHE B . n B 1 153 GLU 153 153 153 GLU GLU B . n B 1 154 PRO 154 154 154 PRO PRO B . n B 1 155 ASP 155 155 155 ASP ASP B . n B 1 156 CYS 156 156 156 CYS CYS B . n B 1 157 SER 157 157 157 SER SER B . n B 1 158 SER 158 158 158 SER SER B . n B 1 159 GLU 159 159 159 GLU GLU B . n B 1 160 ASP 160 160 160 ASP ASP B . n B 1 161 MET 161 161 161 MET MET B . n B 1 162 ASP 162 162 162 ASP ASP B . n B 1 163 HIS 163 163 163 HIS HIS B . n B 1 164 GLY 164 164 164 GLY GLY B . n B 1 165 VAL 165 165 165 VAL VAL B . n B 1 166 LEU 166 166 166 LEU LEU B . n B 1 167 VAL 167 167 167 VAL VAL B . n B 1 168 VAL 168 168 168 VAL VAL B . n B 1 169 GLY 169 169 169 GLY GLY B . n B 1 170 TYR 170 170 170 TYR TYR B . n B 1 171 GLY 171 171 171 GLY GLY B . n B 1 172 PHE 172 172 172 PHE PHE B . n B 1 173 GLU 173 173 173 GLU GLU B . n B 1 174 SER 174 174 174 SER SER B . n B 1 175 THR 175 175 ? ? ? B . n B 1 176 GLU 176 176 ? ? ? B . n B 1 177 SER 177 177 ? ? ? B . n B 1 178 ASP 178 178 ? ? ? B . n B 1 179 ASN 179 179 179 ASN ASN B . n B 1 180 ASN 180 180 180 ASN ASN B . n B 1 181 LYS 181 181 181 LYS LYS B . n B 1 182 TYR 182 182 182 TYR TYR B . n B 1 183 TRP 183 183 183 TRP TRP B . n B 1 184 LEU 184 184 184 LEU LEU B . n B 1 185 VAL 185 185 185 VAL VAL B . n B 1 186 LYS 186 186 186 LYS LYS B . n B 1 187 ASN 187 187 187 ASN ASN B . n B 1 188 SER 188 188 188 SER SER B . n B 1 189 TRP 189 189 189 TRP TRP B . n B 1 190 GLY 190 190 190 GLY GLY B . n B 1 191 GLU 191 191 191 GLU GLU B . n B 1 192 GLU 192 192 192 GLU GLU B . n B 1 193 TRP 193 193 193 TRP TRP B . n B 1 194 GLY 194 194 194 GLY GLY B . n B 1 195 MET 195 195 195 MET MET B . n B 1 196 GLY 196 196 196 GLY GLY B . n B 1 197 GLY 197 197 197 GLY GLY B . n B 1 198 TYR 198 198 198 TYR TYR B . n B 1 199 VAL 199 199 199 VAL VAL B . n B 1 200 LYS 200 200 200 LYS LYS B . n B 1 201 MET 201 201 201 MET MET B . n B 1 202 ALA 202 202 202 ALA ALA B . n B 1 203 LYS 203 203 203 LYS LYS B . n B 1 204 ASP 204 204 204 ASP ASP B . n B 1 205 ARG 205 205 205 ARG ARG B . n B 1 206 ARG 206 206 206 ARG ARG B . n B 1 207 ASN 207 207 207 ASN ASN B . n B 1 208 HIS 208 208 208 HIS HIS B . n B 1 209 CYS 209 209 209 CYS CYS B . n B 1 210 GLY 210 210 210 GLY GLY B . n B 1 211 ILE 211 211 211 ILE ILE B . n B 1 212 ALA 212 212 212 ALA ALA B . n B 1 213 SER 213 213 213 SER SER B . n B 1 214 ALA 214 214 214 ALA ALA B . n B 1 215 ALA 215 215 215 ALA ALA B . n B 1 216 SER 216 216 216 SER SER B . n B 1 217 TYR 217 217 217 TYR TYR B . n B 1 218 PRO 218 218 218 PRO PRO B . n B 1 219 THR 219 219 219 THR THR B . n B 1 220 VAL 220 220 220 VAL VAL B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAG 1 301 1 NAG NAG A . D 3 GOL 1 303 1 GOL GOL A . E 3 GOL 1 306 1 GOL GOL A . F 4 SO4 1 307 1 SO4 SO4 A . G 4 SO4 1 308 2 SO4 SO4 A . H 5 NA 1 300 1 NA NA B . I 3 GOL 1 302 1 GOL GOL B . J 3 GOL 1 304 1 GOL GOL B . K 3 GOL 1 305 1 GOL GOL B . L 4 SO4 1 309 3 SO4 SO4 B . M 4 SO4 1 310 4 SO4 SO4 B . N 6 HOH 1 401 1 HOH HOH A . N 6 HOH 2 403 3 HOH HOH A . N 6 HOH 3 404 4 HOH HOH A . N 6 HOH 4 406 6 HOH HOH A . N 6 HOH 5 409 9 HOH HOH A . N 6 HOH 6 410 10 HOH HOH A . N 6 HOH 7 412 12 HOH HOH A . N 6 HOH 8 413 13 HOH HOH A . N 6 HOH 9 415 15 HOH HOH A . N 6 HOH 10 421 21 HOH HOH A . N 6 HOH 11 423 23 HOH HOH A . N 6 HOH 12 427 27 HOH HOH A . N 6 HOH 13 429 29 HOH HOH A . N 6 HOH 14 430 30 HOH HOH A . N 6 HOH 15 431 31 HOH HOH A . N 6 HOH 16 435 35 HOH HOH A . N 6 HOH 17 436 36 HOH HOH A . N 6 HOH 18 439 39 HOH HOH A . N 6 HOH 19 440 40 HOH HOH A . N 6 HOH 20 443 43 HOH HOH A . N 6 HOH 21 446 46 HOH HOH A . N 6 HOH 22 448 48 HOH HOH A . N 6 HOH 23 450 50 HOH HOH A . N 6 HOH 24 454 54 HOH HOH A . N 6 HOH 25 456 59 HOH HOH A . N 6 HOH 26 458 62 HOH HOH A . N 6 HOH 27 462 75 HOH HOH A . N 6 HOH 28 464 78 HOH HOH A . N 6 HOH 29 466 82 HOH HOH A . N 6 HOH 30 468 91 HOH HOH A . N 6 HOH 31 469 92 HOH HOH A . N 6 HOH 32 470 96 HOH HOH A . N 6 HOH 33 473 107 HOH HOH A . N 6 HOH 34 475 113 HOH HOH A . N 6 HOH 35 478 121 HOH HOH A . N 6 HOH 36 479 135 HOH HOH A . N 6 HOH 37 481 140 HOH HOH A . N 6 HOH 38 482 142 HOH HOH A . N 6 HOH 39 483 150 HOH HOH A . N 6 HOH 40 484 152 HOH HOH A . N 6 HOH 41 485 160 HOH HOH A . N 6 HOH 42 486 165 HOH HOH A . N 6 HOH 43 488 195 HOH HOH A . N 6 HOH 44 492 201 HOH HOH A . N 6 HOH 45 493 202 HOH HOH A . N 6 HOH 46 494 203 HOH HOH A . O 6 HOH 1 402 2 HOH HOH B . O 6 HOH 2 405 5 HOH HOH B . O 6 HOH 3 408 8 HOH HOH B . O 6 HOH 4 411 11 HOH HOH B . O 6 HOH 5 414 14 HOH HOH B . O 6 HOH 6 416 16 HOH HOH B . O 6 HOH 7 418 18 HOH HOH B . O 6 HOH 8 422 22 HOH HOH B . O 6 HOH 9 424 24 HOH HOH B . O 6 HOH 10 425 25 HOH HOH B . O 6 HOH 11 432 32 HOH HOH B . O 6 HOH 12 445 45 HOH HOH B . O 6 HOH 13 447 47 HOH HOH B . O 6 HOH 14 449 49 HOH HOH B . O 6 HOH 15 455 55 HOH HOH B . O 6 HOH 16 457 60 HOH HOH B . O 6 HOH 17 459 63 HOH HOH B . O 6 HOH 18 460 68 HOH HOH B . O 6 HOH 19 461 72 HOH HOH B . O 6 HOH 20 463 77 HOH HOH B . O 6 HOH 21 465 80 HOH HOH B . O 6 HOH 22 467 83 HOH HOH B . O 6 HOH 23 471 97 HOH HOH B . O 6 HOH 24 472 99 HOH HOH B . O 6 HOH 25 474 108 HOH HOH B . O 6 HOH 26 476 115 HOH HOH B . O 6 HOH 27 477 118 HOH HOH B . O 6 HOH 28 480 138 HOH HOH B . O 6 HOH 29 487 167 HOH HOH B . O 6 HOH 30 489 198 HOH HOH B . O 6 HOH 31 490 199 HOH HOH B . O 6 HOH 32 491 200 HOH HOH B . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id ASN _pdbx_struct_mod_residue.label_seq_id 108 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id ASN _pdbx_struct_mod_residue.auth_seq_id 108 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id ASN _pdbx_struct_mod_residue.details 'GLYCOSYLATION SITE' # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 2 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id O _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id B _pdbx_struct_conn_angle.ptnr1_label_comp_id ASP _pdbx_struct_conn_angle.ptnr1_label_seq_id 55 _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id B _pdbx_struct_conn_angle.ptnr1_auth_comp_id ASP _pdbx_struct_conn_angle.ptnr1_auth_seq_id 55 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id NA _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id H _pdbx_struct_conn_angle.ptnr2_label_comp_id NA _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id B _pdbx_struct_conn_angle.ptnr2_auth_comp_id NA _pdbx_struct_conn_angle.ptnr2_auth_seq_id 300 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id N _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id B _pdbx_struct_conn_angle.ptnr3_label_comp_id GLY _pdbx_struct_conn_angle.ptnr3_label_seq_id 58 _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id B _pdbx_struct_conn_angle.ptnr3_auth_comp_id GLY _pdbx_struct_conn_angle.ptnr3_auth_seq_id 58 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 137.2 _pdbx_struct_conn_angle.value_esd ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-03-23 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2020-07-29 4 'Structure model' 1 3 2021-10-13 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Refinement description' 3 2 'Structure model' 'Version format compliance' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Structure summary' 7 4 'Structure model' 'Database references' 8 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp 2 3 'Structure model' entity 3 3 'Structure model' pdbx_chem_comp_identifier 4 3 'Structure model' pdbx_entity_nonpoly 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_site 7 3 'Structure model' struct_site_gen 8 4 'Structure model' chem_comp 9 4 'Structure model' database_2 10 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_chem_comp.name' 2 3 'Structure model' '_chem_comp.type' 3 3 'Structure model' '_entity.pdbx_description' 4 3 'Structure model' '_pdbx_entity_nonpoly.name' 5 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 3 'Structure model' '_struct_conn.pdbx_role' 7 4 'Structure model' '_chem_comp.pdbx_synonyms' 8 4 'Structure model' '_database_2.pdbx_DOI' 9 4 'Structure model' '_database_2.pdbx_database_accession' 10 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -3.3980 5.2426 18.8755 0.1710 0.1834 0.0099 -0.1297 -0.0201 0.0172 1.1758 3.9127 1.9468 0.4270 0.0814 -0.2012 -0.2171 0.3267 -0.1097 0.1057 0.0291 0.1042 -0.3014 0.2168 -0.0486 'X-RAY DIFFRACTION' 2 ? refined -25.8443 -9.8194 8.6211 0.1383 0.0526 0.2218 -0.0142 -0.0697 0.0084 2.5115 1.9964 2.4967 0.5337 -0.6611 -0.2279 0.0146 -0.0444 0.0298 0.0464 0.2891 -0.0323 -0.1097 -0.2045 -0.1631 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 B 1 B 220 ? . . . . ? 'X-RAY DIFFRACTION' 2 1 B 300 B 310 ? . . . . ? 'X-RAY DIFFRACTION' 3 1 B 402 B 491 ? . . . . ? 'X-RAY DIFFRACTION' 4 2 A 2 A 220 ? . . . . ? 'X-RAY DIFFRACTION' 5 2 A 301 A 308 ? . . . . ? 'X-RAY DIFFRACTION' 6 2 A 401 A 494 ? . . . . ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal Locally 'data collection' 'modified Blu-Ice GUI interface to EPICS control' ? 1 PHASER phasing . ? 2 REFMAC refinement 5.5.0102 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 99 ? ? -143.09 22.64 2 1 SER A 157 ? ? -163.84 105.60 3 1 SER A 174 ? ? -56.62 -171.12 4 1 GLU A 176 ? ? -90.11 -84.82 5 1 SER A 177 ? ? 95.65 153.31 6 1 ASP A 178 ? ? 57.90 0.18 7 1 MET A 195 ? ? -101.56 79.44 8 1 ALA A 212 ? ? -74.83 43.34 9 1 SER A 213 ? ? -48.73 -79.93 10 1 ALA A 214 ? ? -119.66 65.72 11 1 ASP B 155 ? ? -175.90 118.46 12 1 ASP B 162 ? ? -141.03 16.61 13 1 ASN B 180 ? ? 61.43 68.04 14 1 MET B 195 ? ? -100.67 76.05 15 1 ARG B 206 ? ? 111.65 -69.70 16 1 ASN B 207 ? ? -76.91 20.43 17 1 HIS B 208 ? ? 96.34 -14.86 18 1 ALA B 212 ? ? -74.97 41.76 19 1 SER B 213 ? ? -56.94 -83.72 20 1 ALA B 214 ? ? -112.14 60.75 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 PRO B 154 ? ? ASP B 155 ? ? -136.19 2 1 ASP B 204 ? ? ARG B 205 ? ? -143.97 3 1 ASN B 207 ? ? HIS B 208 ? ? 143.87 4 1 CYS B 209 ? ? GLY B 210 ? ? 42.42 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 1 ? A ALA 1 2 1 Y 1 B THR 175 ? B THR 175 3 1 Y 1 B GLU 176 ? B GLU 176 4 1 Y 1 B SER 177 ? B SER 177 5 1 Y 1 B ASP 178 ? B ASP 178 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 3 GLYCEROL GOL 4 'SULFATE ION' SO4 5 'SODIUM ION' NA 6 water HOH #