data_3IVN # _entry.id 3IVN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3IVN pdb_00003ivn 10.2210/pdb3ivn/pdb NDB NA0135 ? ? RCSB RCSB054921 ? ? WWPDB D_1000054921 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3IVN _pdbx_database_status.recvd_initial_deposition_date 2009-09-01 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Delfosse, V.' 1 'Dagenais, P.' 2 'Chausse, D.' 3 'Di Tomasso, G.' 4 'Legault, P.' 5 # _citation.id primary _citation.title 'Riboswitch structure: an internal residue mimicking the purine ligand.' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 38 _citation.page_first 2057 _citation.page_last 2068 _citation.year 2010 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20022916 _citation.pdbx_database_id_DOI 10.1093/nar/gkp1080 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Delfosse, V.' 1 ? primary 'Bouchard, P.' 2 ? primary 'Bonneau, E.' 3 ? primary 'Dagenais, P.' 4 ? primary 'Lemay, J.F.' 5 ? primary 'Lafontaine, D.A.' 6 ? primary 'Legault, P.' 7 ? # _cell.entry_id 3IVN _cell.length_a 124.930 _cell.length_b 46.330 _cell.length_c 87.240 _cell.angle_alpha 90.00 _cell.angle_beta 120.04 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3IVN _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man A-riboswitch 22574.332 2 ? U65C ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 9 ? ? ? ? 3 non-polymer syn 'BROMIDE ION' 79.904 2 ? ? ? ? 4 water nat water 18.015 88 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'GGCCAGUAUAACCUCAAUGAUAUGGUUUGAGGGUGUCUACCAGGAACCGUAAAAUCCUGACUACUGGUC(23G)' _entity_poly.pdbx_seq_one_letter_code_can GGCCAGUAUAACCUCAAUGAUAUGGUUUGAGGGUGUCUACCAGGAACCGUAAAAUCCUGACUACUGGUCX _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 C n 1 4 C n 1 5 A n 1 6 G n 1 7 U n 1 8 A n 1 9 U n 1 10 A n 1 11 A n 1 12 C n 1 13 C n 1 14 U n 1 15 C n 1 16 A n 1 17 A n 1 18 U n 1 19 G n 1 20 A n 1 21 U n 1 22 A n 1 23 U n 1 24 G n 1 25 G n 1 26 U n 1 27 U n 1 28 U n 1 29 G n 1 30 A n 1 31 G n 1 32 G n 1 33 G n 1 34 U n 1 35 G n 1 36 U n 1 37 C n 1 38 U n 1 39 A n 1 40 C n 1 41 C n 1 42 A n 1 43 G n 1 44 G n 1 45 A n 1 46 A n 1 47 C n 1 48 C n 1 49 G n 1 50 U n 1 51 A n 1 52 A n 1 53 A n 1 54 A n 1 55 U n 1 56 C n 1 57 C n 1 58 U n 1 59 G n 1 60 A n 1 61 C n 1 62 U n 1 63 A n 1 64 C n 1 65 U n 1 66 G n 1 67 G n 1 68 U n 1 69 C n 1 70 23G n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus subtilis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1423 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'ptZ19R-derived pTR-4 vector' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'In vitro translation' # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3IVN _struct_ref.pdbx_db_accession 3IVN _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 5 _struct_ref.pdbx_seq_one_letter_code GGCCAGUAUAACCUCAAUGAUAUGGUUUGAGGGUGUCUACCAGGAACCGUAAAAUCCUGACUACUGGUCG _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3IVN A 1 ? 70 ? 3IVN 5 ? 74 ? 5 74 2 1 3IVN B 1 ? 70 ? 3IVN 5 ? 74 ? 5 74 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 23G 'RNA OH 3 prime terminus' n ;GUANOSINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHATE ; ? 'C10 H13 N5 O10 P2' 425.185 A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 BR non-polymer . 'BROMIDE ION' ? 'Br -1' 79.904 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # _exptl.entry_id 3IVN _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.42 _exptl_crystal.density_percent_sol 49.18 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 296 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '2 mM Spermine, 50 mM Na Cacodylate, 32% MPD, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 296K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2009-04-19 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.91924 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X29A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X29A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.91924 # _reflns.entry_id 3IVN _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 26.04 _reflns.d_resolution_high 2.80 _reflns.number_obs 10839 _reflns.number_all ? _reflns.percent_possible_obs 99.1 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.13 _reflns.pdbx_netI_over_sigmaI 10.5 _reflns.B_iso_Wilson_estimate 31.7 _reflns.pdbx_redundancy 3.6 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.80 _reflns_shell.d_res_low 2.93 _reflns_shell.percent_possible_all 99.0 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.63 _reflns_shell.meanI_over_sigI_obs 3.1 _reflns_shell.pdbx_redundancy 3.0 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3IVN _refine.ls_d_res_high 2.800 _refine.ls_d_res_low 26.039 _refine.pdbx_ls_sigma_F 2.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.510 _refine.ls_number_reflns_obs 10839 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method ? _refine.ls_matrix_type ? _refine.pdbx_R_Free_selection_details ? _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.232 _refine.ls_R_factor_R_work 0.227 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.277 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 9.990 _refine.ls_number_reflns_R_free 1083 _refine.ls_number_reflns_R_work 9756 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 30.376 _refine.solvent_model_param_bsol 11.234 _refine.solvent_model_param_ksol 0.276 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.052 _refine.aniso_B[2][2] -10.795 _refine.aniso_B[3][3] 10.847 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 8.326 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.390 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.110 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.900 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB id 1Y26' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 64.44 _refine.B_iso_min 14.53 _refine.pdbx_overall_phase_error 29.490 _refine.occupancy_max 1.00 _refine.occupancy_min 0.51 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 2932 _refine_hist.pdbx_number_atoms_ligand 11 _refine_hist.number_atoms_solvent 88 _refine_hist.number_atoms_total 3031 _refine_hist.d_res_high 2.800 _refine_hist.d_res_low 26.039 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.003 ? ? 3278 'X-RAY DIFFRACTION' ? f_angle_d 1.147 ? ? 5104 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 16.321 ? ? 1648 'X-RAY DIFFRACTION' ? f_chiral_restr 0.052 ? ? 688 'X-RAY DIFFRACTION' ? f_plane_restr 0.002 ? ? 138 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 2.8004 2.9277 1219 0.3388 99.00 0.4254 . . 135 . . 'X-RAY DIFFRACTION' . 2.9277 3.0818 1202 0.2941 100.00 0.3234 . . 134 . . 'X-RAY DIFFRACTION' . 3.0818 3.2745 1198 0.2464 100.00 0.3167 . . 131 . . 'X-RAY DIFFRACTION' . 3.2745 3.5268 1220 0.2207 100.00 0.2519 . . 136 . . 'X-RAY DIFFRACTION' . 3.5268 3.8807 1217 0.2064 99.00 0.2739 . . 135 . . 'X-RAY DIFFRACTION' . 3.8807 4.4398 1214 0.1924 100.00 0.2599 . . 135 . . 'X-RAY DIFFRACTION' . 4.4398 5.5846 1217 0.1955 99.00 0.2316 . . 136 . . 'X-RAY DIFFRACTION' . 5.5846 26.0398 1269 0.1988 99.00 0.2216 . . 141 . . # _struct.entry_id 3IVN _struct.title 'Structure of the U65C mutant A-riboswitch aptamer from the Bacillus subtilis pbuE operon' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3IVN _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'Aptamer, RNA, A-Riboswitch' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 3 ? I N N 3 ? J N N 2 ? K N N 2 ? L N N 2 ? M N N 2 ? N N N 4 ? O N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A G 2 O6 ? ? ? 1_555 C MG . MG ? ? A G 6 A MG 101 1_555 ? ? ? ? ? ? ? 2.963 ? ? metalc2 metalc ? ? A U 9 "O3'" ? ? ? 1_555 D MG . MG ? ? A U 13 A MG 102 1_555 ? ? ? ? ? ? ? 2.761 ? ? metalc3 metalc ? ? A U 9 "O2'" ? ? ? 1_555 D MG . MG ? ? A U 13 A MG 102 1_555 ? ? ? ? ? ? ? 2.841 ? ? metalc4 metalc ? ? A A 11 OP1 ? ? ? 1_555 E MG . MG ? ? A A 15 A MG 103 1_555 ? ? ? ? ? ? ? 2.792 ? ? metalc5 metalc ? ? A G 35 O6 ? ? ? 1_555 D MG . MG ? ? A G 39 A MG 102 1_555 ? ? ? ? ? ? ? 2.923 ? ? metalc6 metalc ? ? E MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 103 A HOH 133 1_555 ? ? ? ? ? ? ? 2.788 ? ? metalc7 metalc ? ? E MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 103 A HOH 141 1_555 ? ? ? ? ? ? ? 2.833 ? ? metalc8 metalc ? ? B G 2 O6 ? ? ? 1_555 J MG . MG ? ? B G 6 B MG 101 1_555 ? ? ? ? ? ? ? 2.929 ? ? metalc9 metalc ? ? B A 10 OP2 ? ? ? 1_555 K MG . MG ? ? B A 14 B MG 102 1_555 ? ? ? ? ? ? ? 2.604 ? ? metalc10 metalc ? ? B G 35 O6 ? ? ? 1_555 K MG . MG ? ? B G 39 B MG 102 1_555 ? ? ? ? ? ? ? 2.827 ? ? metalc11 metalc ? ? B U 68 O4 ? ? ? 1_555 J MG . MG ? ? B U 72 B MG 101 1_555 ? ? ? ? ? ? ? 2.971 ? ? metalc12 metalc ? ? L MG . MG ? ? ? 1_555 O HOH . O ? ? B MG 103 B HOH 116 1_555 ? ? ? ? ? ? ? 2.888 ? ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 69 N3 ? ? A G 5 A C 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 69 O2 ? ? A G 5 A C 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 69 N4 ? ? A G 5 A C 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A U 68 O2 ? ? A G 6 A U 72 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog5 hydrog ? ? A G 2 O6 ? ? ? 1_555 A U 68 N3 ? ? A G 6 A U 72 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog6 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 67 N1 ? ? A C 7 A G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 67 O6 ? ? A C 7 A G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 67 N2 ? ? A C 7 A G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 4 N3 ? ? ? 1_555 A G 66 N1 ? ? A C 8 A G 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 66 O6 ? ? A C 8 A G 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 66 N2 ? ? A C 8 A G 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A A 5 N1 ? ? ? 1_555 A U 65 N3 ? ? A A 9 A U 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A A 5 N6 ? ? ? 1_555 A U 65 O4 ? ? A A 9 A U 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A G 6 N1 ? ? ? 1_555 A C 64 N3 ? ? A G 10 A C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 6 N2 ? ? ? 1_555 A C 64 O2 ? ? A G 10 A C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 6 O6 ? ? ? 1_555 A C 64 N4 ? ? A G 10 A C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A U 7 N3 ? ? ? 1_555 A A 63 N1 ? ? A U 11 A A 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A U 7 O4 ? ? ? 1_555 A A 63 N6 ? ? A U 11 A A 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A A 8 N1 ? ? ? 1_555 A U 62 N3 ? ? A A 12 A U 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A A 8 N6 ? ? ? 1_555 A U 62 O4 ? ? A A 12 A U 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A U 9 N3 ? ? ? 1_555 A A 39 N1 ? ? A U 13 A A 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A U 9 O4 ? ? ? 1_555 A A 39 N6 ? ? A U 13 A A 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A A 10 N1 ? ? ? 1_555 A G 33 N2 ? ? A A 14 A G 37 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog24 hydrog ? ? A A 10 N6 ? ? ? 1_555 A G 33 N3 ? ? A A 14 A G 37 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog25 hydrog ? ? A C 12 N3 ? ? ? 1_555 A G 32 N1 ? ? A C 16 A G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A C 12 N4 ? ? ? 1_555 A G 32 O6 ? ? A C 16 A G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A C 12 O2 ? ? ? 1_555 A G 32 N2 ? ? A C 16 A G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A C 13 N3 ? ? ? 1_555 A G 31 N1 ? ? A C 17 A G 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A C 13 N4 ? ? ? 1_555 A G 31 O6 ? ? A C 17 A G 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A C 13 O2 ? ? ? 1_555 A G 31 N2 ? ? A C 17 A G 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A U 14 N3 ? ? ? 1_555 A A 30 N1 ? ? A U 18 A A 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A U 14 O4 ? ? ? 1_555 A A 30 N6 ? ? A U 18 A A 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A C 15 N3 ? ? ? 1_555 A G 29 N1 ? ? A C 19 A G 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A C 15 N4 ? ? ? 1_555 A G 29 O6 ? ? A C 19 A G 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A C 15 O2 ? ? ? 1_555 A G 29 N2 ? ? A C 19 A G 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A A 16 N1 ? ? ? 1_555 A U 28 N3 ? ? A A 20 A U 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A A 16 N6 ? ? ? 1_555 A U 28 O4 ? ? A A 20 A U 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A A 17 N1 ? ? ? 1_555 A U 27 N3 ? ? A A 21 A U 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A A 17 N6 ? ? ? 1_555 A U 27 O4 ? ? A A 21 A U 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A U 18 N3 ? ? ? 1_555 A U 26 O4 ? ? A U 22 A U 30 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog41 hydrog ? ? A U 18 O2 ? ? ? 1_555 A U 26 N3 ? ? A U 22 A U 30 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog42 hydrog ? ? A A 20 N1 ? ? ? 1_555 A A 53 N6 ? ? A A 24 A A 57 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog43 hydrog ? ? A A 20 N6 ? ? ? 1_555 A A 53 N7 ? ? A A 24 A A 57 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog44 hydrog ? ? A U 21 N3 ? ? ? 1_555 A A 52 N7 ? ? A U 25 A A 56 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog45 hydrog ? ? A U 21 O2 ? ? ? 1_555 A A 52 N6 ? ? A U 25 A A 56 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog46 hydrog ? ? A A 22 N7 ? ? ? 1_555 A A 51 N6 ? ? A A 26 A A 55 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog47 hydrog ? ? A G 24 O6 ? ? ? 1_555 A C 47 N4 ? ? A G 28 A C 51 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog48 hydrog ? ? A G 24 N1 ? ? ? 1_555 A C 48 N3 ? ? A G 28 A C 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A G 24 N2 ? ? ? 1_555 A C 48 O2 ? ? A G 28 A C 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A G 24 O6 ? ? ? 1_555 A C 48 N4 ? ? A G 28 A C 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A G 25 N1 ? ? ? 1_555 A C 47 N3 ? ? A G 29 A C 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A G 25 N2 ? ? ? 1_555 A C 47 O2 ? ? A G 29 A C 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A G 25 O6 ? ? ? 1_555 A C 47 N4 ? ? A G 29 A C 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A G 33 N1 ? ? ? 1_555 A C 40 N3 ? ? A G 37 A C 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A G 33 N2 ? ? ? 1_555 A C 40 O2 ? ? A G 37 A C 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A G 33 O6 ? ? ? 1_555 A C 40 N4 ? ? A G 37 A C 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A G 35 N2 ? ? ? 1_555 A U 38 O2 ? ? A G 39 A U 42 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog58 hydrog ? ? A G 35 N1 ? ? ? 1_555 A C 61 N3 ? ? A G 39 A C 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A G 35 N2 ? ? ? 1_555 A C 61 O2 ? ? A G 39 A C 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A G 35 O6 ? ? ? 1_555 A C 61 N4 ? ? A G 39 A C 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A C 37 N4 ? ? ? 1_555 A U 62 O2 ? ? A C 41 A U 66 1_555 ? ? ? ? ? ? 'C-U MISPAIR' ? ? ? hydrog62 hydrog ? ? A C 41 N3 ? ? ? 1_555 A G 59 N1 ? ? A C 45 A G 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A C 41 N4 ? ? ? 1_555 A G 59 O6 ? ? A C 45 A G 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A C 41 O2 ? ? ? 1_555 A G 59 N2 ? ? A C 45 A G 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A A 42 N1 ? ? ? 1_555 A U 58 N3 ? ? A A 46 A U 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A A 42 N6 ? ? ? 1_555 A U 58 O4 ? ? A A 46 A U 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A G 43 N1 ? ? ? 1_555 A C 57 N3 ? ? A G 47 A C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A G 43 N2 ? ? ? 1_555 A C 57 O2 ? ? A G 47 A C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A G 43 O6 ? ? ? 1_555 A C 57 N4 ? ? A G 47 A C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A G 44 N1 ? ? ? 1_555 A C 56 N3 ? ? A G 48 A C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A G 44 N2 ? ? ? 1_555 A C 56 O2 ? ? A G 48 A C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A G 44 O6 ? ? ? 1_555 A C 56 N4 ? ? A G 48 A C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A A 45 N1 ? ? ? 1_555 A U 55 N3 ? ? A A 49 A U 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A A 45 N6 ? ? ? 1_555 A U 55 O4 ? ? A A 49 A U 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A G 49 N2 ? ? ? 1_555 A U 50 O4 ? ? A G 53 A U 54 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog76 hydrog ? ? B G 1 N1 ? ? ? 1_555 B C 69 N3 ? ? B G 5 B C 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? B G 1 N2 ? ? ? 1_555 B C 69 O2 ? ? B G 5 B C 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? B G 1 O6 ? ? ? 1_555 B C 69 N4 ? ? B G 5 B C 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? B G 2 N1 ? ? ? 1_555 B U 68 O2 ? ? B G 6 B U 72 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog80 hydrog ? ? B G 2 O6 ? ? ? 1_555 B U 68 N3 ? ? B G 6 B U 72 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog81 hydrog ? ? B C 3 N3 ? ? ? 1_555 B G 67 N1 ? ? B C 7 B G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? B C 3 N4 ? ? ? 1_555 B G 67 O6 ? ? B C 7 B G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? B C 3 O2 ? ? ? 1_555 B G 67 N2 ? ? B C 7 B G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? B C 4 N3 ? ? ? 1_555 B G 66 N1 ? ? B C 8 B G 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? B C 4 N4 ? ? ? 1_555 B G 66 O6 ? ? B C 8 B G 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? B C 4 O2 ? ? ? 1_555 B G 66 N2 ? ? B C 8 B G 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? B A 5 N1 ? ? ? 1_555 B U 65 N3 ? ? B A 9 B U 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? B A 5 N6 ? ? ? 1_555 B U 65 O4 ? ? B A 9 B U 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? B G 6 N1 ? ? ? 1_555 B C 64 N3 ? ? B G 10 B C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? B G 6 N2 ? ? ? 1_555 B C 64 O2 ? ? B G 10 B C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? B G 6 O6 ? ? ? 1_555 B C 64 N4 ? ? B G 10 B C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? B U 7 N3 ? ? ? 1_555 B A 63 N1 ? ? B U 11 B A 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? B U 7 O4 ? ? ? 1_555 B A 63 N6 ? ? B U 11 B A 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? B A 8 N1 ? ? ? 1_555 B U 62 N3 ? ? B A 12 B U 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? B A 8 N6 ? ? ? 1_555 B U 62 O4 ? ? B A 12 B U 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? B U 9 N3 ? ? ? 1_555 B A 39 N1 ? ? B U 13 B A 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? B U 9 O4 ? ? ? 1_555 B A 39 N6 ? ? B U 13 B A 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? B A 10 N1 ? ? ? 1_555 B G 33 N2 ? ? B A 14 B G 37 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog99 hydrog ? ? B A 10 N6 ? ? ? 1_555 B G 33 N3 ? ? B A 14 B G 37 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog100 hydrog ? ? B C 12 N3 ? ? ? 1_555 B G 32 N1 ? ? B C 16 B G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog101 hydrog ? ? B C 12 N4 ? ? ? 1_555 B G 32 O6 ? ? B C 16 B G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog102 hydrog ? ? B C 12 O2 ? ? ? 1_555 B G 32 N2 ? ? B C 16 B G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? B C 13 N3 ? ? ? 1_555 B G 31 N1 ? ? B C 17 B G 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? B C 13 N4 ? ? ? 1_555 B G 31 O6 ? ? B C 17 B G 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? B C 13 O2 ? ? ? 1_555 B G 31 N2 ? ? B C 17 B G 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog106 hydrog ? ? B U 14 N3 ? ? ? 1_555 B A 30 N1 ? ? B U 18 B A 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog107 hydrog ? ? B U 14 O4 ? ? ? 1_555 B A 30 N6 ? ? B U 18 B A 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog108 hydrog ? ? B C 15 N3 ? ? ? 1_555 B G 29 N1 ? ? B C 19 B G 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog109 hydrog ? ? B C 15 N4 ? ? ? 1_555 B G 29 O6 ? ? B C 19 B G 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog110 hydrog ? ? B C 15 O2 ? ? ? 1_555 B G 29 N2 ? ? B C 19 B G 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog111 hydrog ? ? B A 16 N1 ? ? ? 1_555 B U 28 N3 ? ? B A 20 B U 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? B A 16 N6 ? ? ? 1_555 B U 28 O4 ? ? B A 20 B U 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog113 hydrog ? ? B A 17 N1 ? ? ? 1_555 B U 27 N3 ? ? B A 21 B U 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog114 hydrog ? ? B A 17 N6 ? ? ? 1_555 B U 27 O4 ? ? B A 21 B U 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog115 hydrog ? ? B U 18 N3 ? ? ? 1_555 B U 26 O4 ? ? B U 22 B U 30 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog116 hydrog ? ? B U 18 O2 ? ? ? 1_555 B U 26 N3 ? ? B U 22 B U 30 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog117 hydrog ? ? B A 20 N1 ? ? ? 1_555 B A 53 N6 ? ? B A 24 B A 57 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog118 hydrog ? ? B U 21 O2 ? ? ? 1_555 B G 24 N2 ? ? B U 25 B G 28 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog119 hydrog ? ? B U 21 N3 ? ? ? 1_555 B A 52 N7 ? ? B U 25 B A 56 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog120 hydrog ? ? B U 21 O2 ? ? ? 1_555 B A 52 N6 ? ? B U 25 B A 56 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog121 hydrog ? ? B G 24 O6 ? ? ? 1_555 B C 47 N4 ? ? B G 28 B C 51 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog122 hydrog ? ? B G 24 N1 ? ? ? 1_555 B C 48 N3 ? ? B G 28 B C 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog123 hydrog ? ? B G 24 N2 ? ? ? 1_555 B C 48 O2 ? ? B G 28 B C 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog124 hydrog ? ? B G 24 O6 ? ? ? 1_555 B C 48 N4 ? ? B G 28 B C 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog125 hydrog ? ? B G 25 N1 ? ? ? 1_555 B C 47 N3 ? ? B G 29 B C 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog126 hydrog ? ? B G 25 N2 ? ? ? 1_555 B C 47 O2 ? ? B G 29 B C 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog127 hydrog ? ? B G 25 O6 ? ? ? 1_555 B C 47 N4 ? ? B G 29 B C 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? B G 33 N1 ? ? ? 1_555 B C 40 N3 ? ? B G 37 B C 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog129 hydrog ? ? B G 33 N2 ? ? ? 1_555 B C 40 O2 ? ? B G 37 B C 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog130 hydrog ? ? B G 33 O6 ? ? ? 1_555 B C 40 N4 ? ? B G 37 B C 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog131 hydrog ? ? B G 35 N2 ? ? ? 1_555 B U 38 O2 ? ? B G 39 B U 42 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog132 hydrog ? ? B G 35 N1 ? ? ? 1_555 B C 61 N3 ? ? B G 39 B C 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog133 hydrog ? ? B G 35 N2 ? ? ? 1_555 B C 61 O2 ? ? B G 39 B C 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog134 hydrog ? ? B G 35 O6 ? ? ? 1_555 B C 61 N4 ? ? B G 39 B C 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog135 hydrog ? ? B C 37 N4 ? ? ? 1_555 B U 62 O2 ? ? B C 41 B U 66 1_555 ? ? ? ? ? ? 'C-U MISPAIR' ? ? ? hydrog136 hydrog ? ? B C 41 N3 ? ? ? 1_555 B G 59 N1 ? ? B C 45 B G 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog137 hydrog ? ? B C 41 N4 ? ? ? 1_555 B G 59 O6 ? ? B C 45 B G 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog138 hydrog ? ? B C 41 O2 ? ? ? 1_555 B G 59 N2 ? ? B C 45 B G 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog139 hydrog ? ? B A 42 N1 ? ? ? 1_555 B U 58 N3 ? ? B A 46 B U 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog140 hydrog ? ? B A 42 N6 ? ? ? 1_555 B U 58 O4 ? ? B A 46 B U 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog141 hydrog ? ? B G 43 N1 ? ? ? 1_555 B C 57 N3 ? ? B G 47 B C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog142 hydrog ? ? B G 43 N2 ? ? ? 1_555 B C 57 O2 ? ? B G 47 B C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog143 hydrog ? ? B G 43 O6 ? ? ? 1_555 B C 57 N4 ? ? B G 47 B C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog144 hydrog ? ? B G 44 N1 ? ? ? 1_555 B C 56 N3 ? ? B G 48 B C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog145 hydrog ? ? B G 44 N2 ? ? ? 1_555 B C 56 O2 ? ? B G 48 B C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog146 hydrog ? ? B G 44 O6 ? ? ? 1_555 B C 56 N4 ? ? B G 48 B C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog147 hydrog ? ? B A 45 N1 ? ? ? 1_555 B U 55 N3 ? ? B A 49 B U 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog148 hydrog ? ? B A 45 N6 ? ? ? 1_555 B U 55 O4 ? ? B A 49 B U 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog149 hydrog ? ? B G 49 N2 ? ? ? 1_555 B U 50 O4 ? ? B G 53 B U 54 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 101 ? 4 'BINDING SITE FOR RESIDUE MG A 101' AC2 Software A MG 102 ? 3 'BINDING SITE FOR RESIDUE MG A 102' AC3 Software A MG 103 ? 3 'BINDING SITE FOR RESIDUE MG A 103' AC4 Software A MG 104 ? 2 'BINDING SITE FOR RESIDUE MG A 104' AC5 Software A MG 105 ? 2 'BINDING SITE FOR RESIDUE MG A 105' AC6 Software A BR 106 ? 4 'BINDING SITE FOR RESIDUE BR A 106' AC7 Software A BR 107 ? 2 'BINDING SITE FOR RESIDUE BR A 107' AC8 Software B MG 101 ? 4 'BINDING SITE FOR RESIDUE MG B 101' AC9 Software B MG 102 ? 4 'BINDING SITE FOR RESIDUE MG B 102' BC1 Software B MG 103 ? 3 'BINDING SITE FOR RESIDUE MG B 103' BC2 Software B MG 104 ? 2 'BINDING SITE FOR RESIDUE MG B 104' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 G A 1 ? G A 5 . ? 1_555 ? 2 AC1 4 G A 2 ? G A 6 . ? 1_555 ? 3 AC1 4 G A 67 ? G A 71 . ? 1_555 ? 4 AC1 4 U A 68 ? U A 72 . ? 1_555 ? 5 AC2 3 U A 9 ? U A 13 . ? 1_555 ? 6 AC2 3 A A 10 ? A A 14 . ? 1_555 ? 7 AC2 3 G A 35 ? G A 39 . ? 1_555 ? 8 AC3 3 A A 11 ? A A 15 . ? 1_555 ? 9 AC3 3 HOH N . ? HOH A 133 . ? 1_555 ? 10 AC3 3 HOH N . ? HOH A 141 . ? 1_555 ? 11 AC4 2 G A 33 ? G A 37 . ? 1_555 ? 12 AC4 2 U A 34 ? U A 38 . ? 1_555 ? 13 AC5 2 G A 6 ? G A 10 . ? 1_555 ? 14 AC5 2 U A 7 ? U A 11 . ? 1_555 ? 15 AC6 4 C A 56 ? C A 60 . ? 1_555 ? 16 AC6 4 C A 57 ? C A 61 . ? 1_555 ? 17 AC6 4 BR I . ? BR A 107 . ? 1_555 ? 18 AC6 4 G B 67 ? G B 71 . ? 2_556 ? 19 AC7 2 G A 44 ? G A 48 . ? 1_555 ? 20 AC7 2 BR H . ? BR A 106 . ? 1_555 ? 21 AC8 4 G B 1 ? G B 5 . ? 1_555 ? 22 AC8 4 G B 2 ? G B 6 . ? 1_555 ? 23 AC8 4 G B 67 ? G B 71 . ? 1_555 ? 24 AC8 4 U B 68 ? U B 72 . ? 1_555 ? 25 AC9 4 U B 9 ? U B 13 . ? 1_555 ? 26 AC9 4 A B 10 ? A B 14 . ? 1_555 ? 27 AC9 4 G B 35 ? G B 39 . ? 1_555 ? 28 AC9 4 C B 61 ? C B 65 . ? 1_555 ? 29 BC1 3 U B 58 ? U B 62 . ? 1_555 ? 30 BC1 3 G B 59 ? G B 63 . ? 1_555 ? 31 BC1 3 HOH O . ? HOH B 116 . ? 1_555 ? 32 BC2 2 G B 25 ? G B 29 . ? 1_555 ? 33 BC2 2 A B 46 ? A B 50 . ? 1_555 ? # _database_PDB_matrix.entry_id 3IVN _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3IVN _atom_sites.fract_transf_matrix[1][1] 0.008004 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004629 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021584 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013241 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BR C MG N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 5 5 G G A . n A 1 2 G 2 6 6 G G A . n A 1 3 C 3 7 7 C C A . n A 1 4 C 4 8 8 C C A . n A 1 5 A 5 9 9 A A A . n A 1 6 G 6 10 10 G G A . n A 1 7 U 7 11 11 U U A . n A 1 8 A 8 12 12 A A A . n A 1 9 U 9 13 13 U U A . n A 1 10 A 10 14 14 A A A . n A 1 11 A 11 15 15 A A A . n A 1 12 C 12 16 16 C C A . n A 1 13 C 13 17 17 C C A . n A 1 14 U 14 18 18 U U A . n A 1 15 C 15 19 19 C C A . n A 1 16 A 16 20 20 A A A . n A 1 17 A 17 21 21 A A A . n A 1 18 U 18 22 22 U U A . n A 1 19 G 19 23 23 G G A . n A 1 20 A 20 24 24 A A A . n A 1 21 U 21 25 25 U U A . n A 1 22 A 22 26 26 A A A . n A 1 23 U 23 27 27 U U A . n A 1 24 G 24 28 28 G G A . n A 1 25 G 25 29 29 G G A . n A 1 26 U 26 30 30 U U A . n A 1 27 U 27 31 31 U U A . n A 1 28 U 28 32 32 U U A . n A 1 29 G 29 33 33 G G A . n A 1 30 A 30 34 34 A A A . n A 1 31 G 31 35 35 G G A . n A 1 32 G 32 36 36 G G A . n A 1 33 G 33 37 37 G G A . n A 1 34 U 34 38 38 U U A . n A 1 35 G 35 39 39 G G A . n A 1 36 U 36 40 40 U U A . n A 1 37 C 37 41 41 C C A . n A 1 38 U 38 42 42 U U A . n A 1 39 A 39 43 43 A A A . n A 1 40 C 40 44 44 C C A . n A 1 41 C 41 45 45 C C A . n A 1 42 A 42 46 46 A A A . n A 1 43 G 43 47 47 G G A . n A 1 44 G 44 48 48 G G A . n A 1 45 A 45 49 49 A A A . n A 1 46 A 46 50 50 A A A . n A 1 47 C 47 51 51 C C A . n A 1 48 C 48 52 52 C C A . n A 1 49 G 49 53 53 G G A . n A 1 50 U 50 54 54 U U A . n A 1 51 A 51 55 55 A A A . n A 1 52 A 52 56 56 A A A . n A 1 53 A 53 57 57 A A A . n A 1 54 A 54 58 58 A A A . n A 1 55 U 55 59 59 U U A . n A 1 56 C 56 60 60 C C A . n A 1 57 C 57 61 61 C C A . n A 1 58 U 58 62 62 U U A . n A 1 59 G 59 63 63 G G A . n A 1 60 A 60 64 64 A A A . n A 1 61 C 61 65 65 C C A . n A 1 62 U 62 66 66 U U A . n A 1 63 A 63 67 67 A A A . n A 1 64 C 64 68 68 C C A . n A 1 65 U 65 69 69 U U A . n A 1 66 G 66 70 70 G G A . n A 1 67 G 67 71 71 G G A . n A 1 68 U 68 72 72 U U A . n A 1 69 C 69 73 73 C C A . n A 1 70 23G 70 74 ? ? ? A . n B 1 1 G 1 5 5 G G B . n B 1 2 G 2 6 6 G G B . n B 1 3 C 3 7 7 C C B . n B 1 4 C 4 8 8 C C B . n B 1 5 A 5 9 9 A A B . n B 1 6 G 6 10 10 G G B . n B 1 7 U 7 11 11 U U B . n B 1 8 A 8 12 12 A A B . n B 1 9 U 9 13 13 U U B . n B 1 10 A 10 14 14 A A B . n B 1 11 A 11 15 15 A A B . n B 1 12 C 12 16 16 C C B . n B 1 13 C 13 17 17 C C B . n B 1 14 U 14 18 18 U U B . n B 1 15 C 15 19 19 C C B . n B 1 16 A 16 20 20 A A B . n B 1 17 A 17 21 21 A A B . n B 1 18 U 18 22 22 U U B . n B 1 19 G 19 23 23 G G B . n B 1 20 A 20 24 24 A A B . n B 1 21 U 21 25 25 U U B . n B 1 22 A 22 26 26 A A B . n B 1 23 U 23 27 27 U U B . n B 1 24 G 24 28 28 G G B . n B 1 25 G 25 29 29 G G B . n B 1 26 U 26 30 30 U U B . n B 1 27 U 27 31 31 U U B . n B 1 28 U 28 32 32 U U B . n B 1 29 G 29 33 33 G G B . n B 1 30 A 30 34 34 A A B . n B 1 31 G 31 35 35 G G B . n B 1 32 G 32 36 36 G G B . n B 1 33 G 33 37 37 G G B . n B 1 34 U 34 38 38 U U B . n B 1 35 G 35 39 39 G G B . n B 1 36 U 36 40 40 U U B . n B 1 37 C 37 41 41 C C B . n B 1 38 U 38 42 42 U U B . n B 1 39 A 39 43 43 A A B . n B 1 40 C 40 44 44 C C B . n B 1 41 C 41 45 45 C C B . n B 1 42 A 42 46 46 A A B . n B 1 43 G 43 47 47 G G B . n B 1 44 G 44 48 48 G G B . n B 1 45 A 45 49 49 A A B . n B 1 46 A 46 50 50 A A B . n B 1 47 C 47 51 51 C C B . n B 1 48 C 48 52 52 C C B . n B 1 49 G 49 53 53 G G B . n B 1 50 U 50 54 54 U U B . n B 1 51 A 51 55 55 A A B . n B 1 52 A 52 56 56 A A B . n B 1 53 A 53 57 57 A A B . n B 1 54 A 54 58 58 A A B . n B 1 55 U 55 59 59 U U B . n B 1 56 C 56 60 60 C C B . n B 1 57 C 57 61 61 C C B . n B 1 58 U 58 62 62 U U B . n B 1 59 G 59 63 63 G G B . n B 1 60 A 60 64 64 A A B . n B 1 61 C 61 65 65 C C B . n B 1 62 U 62 66 66 U U B . n B 1 63 A 63 67 67 A A B . n B 1 64 C 64 68 68 C C B . n B 1 65 U 65 69 69 U U B . n B 1 66 G 66 70 70 G G B . n B 1 67 G 67 71 71 G G B . n B 1 68 U 68 72 72 U U B . n B 1 69 C 69 73 73 C C B . n B 1 70 23G 70 74 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG 1 101 101 MG MG A . D 2 MG 1 102 102 MG MG A . E 2 MG 1 103 103 MG MG A . F 2 MG 1 104 104 MG MG A . G 2 MG 1 105 105 MG MG A . H 3 BR 1 106 106 BR BR A . I 3 BR 1 107 107 BR BR A . J 2 MG 1 101 101 MG MG B . K 2 MG 1 102 102 MG MG B . L 2 MG 1 103 103 MG MG B . M 2 MG 1 104 104 MG MG B . N 4 HOH 1 108 108 HOH HOH A . N 4 HOH 2 109 109 HOH HOH A . N 4 HOH 3 110 110 HOH HOH A . N 4 HOH 4 111 111 HOH HOH A . N 4 HOH 5 112 112 HOH HOH A . N 4 HOH 6 113 113 HOH HOH A . N 4 HOH 7 114 114 HOH HOH A . N 4 HOH 8 115 115 HOH HOH A . N 4 HOH 9 116 116 HOH HOH A . N 4 HOH 10 117 117 HOH HOH A . N 4 HOH 11 118 118 HOH HOH A . N 4 HOH 12 119 119 HOH HOH A . N 4 HOH 13 120 120 HOH HOH A . N 4 HOH 14 121 121 HOH HOH A . N 4 HOH 15 122 122 HOH HOH A . N 4 HOH 16 123 123 HOH HOH A . N 4 HOH 17 124 124 HOH HOH A . N 4 HOH 18 125 125 HOH HOH A . N 4 HOH 19 126 126 HOH HOH A . N 4 HOH 20 127 127 HOH HOH A . N 4 HOH 21 128 128 HOH HOH A . N 4 HOH 22 129 129 HOH HOH A . N 4 HOH 23 130 130 HOH HOH A . N 4 HOH 24 131 131 HOH HOH A . N 4 HOH 25 132 132 HOH HOH A . N 4 HOH 26 133 133 HOH HOH A . N 4 HOH 27 134 134 HOH HOH A . N 4 HOH 28 135 135 HOH HOH A . N 4 HOH 29 136 136 HOH HOH A . N 4 HOH 30 137 137 HOH HOH A . N 4 HOH 31 138 138 HOH HOH A . N 4 HOH 32 139 139 HOH HOH A . N 4 HOH 33 140 140 HOH HOH A . N 4 HOH 34 141 141 HOH HOH A . N 4 HOH 35 142 142 HOH HOH A . N 4 HOH 36 143 143 HOH HOH A . N 4 HOH 37 144 144 HOH HOH A . N 4 HOH 38 145 145 HOH HOH A . N 4 HOH 39 146 146 HOH HOH A . N 4 HOH 40 147 147 HOH HOH A . N 4 HOH 41 148 148 HOH HOH A . N 4 HOH 42 149 149 HOH HOH A . N 4 HOH 43 150 150 HOH HOH A . N 4 HOH 44 151 151 HOH HOH A . N 4 HOH 45 152 152 HOH HOH A . N 4 HOH 46 153 153 HOH HOH A . N 4 HOH 47 154 137 HOH HOH A . O 4 HOH 1 105 105 HOH HOH B . O 4 HOH 2 106 106 HOH HOH B . O 4 HOH 3 107 107 HOH HOH B . O 4 HOH 4 108 108 HOH HOH B . O 4 HOH 5 109 109 HOH HOH B . O 4 HOH 6 110 110 HOH HOH B . O 4 HOH 7 111 111 HOH HOH B . O 4 HOH 8 112 112 HOH HOH B . O 4 HOH 9 113 113 HOH HOH B . O 4 HOH 10 114 114 HOH HOH B . O 4 HOH 11 115 115 HOH HOH B . O 4 HOH 12 116 116 HOH HOH B . O 4 HOH 13 117 117 HOH HOH B . O 4 HOH 14 118 118 HOH HOH B . O 4 HOH 15 119 119 HOH HOH B . O 4 HOH 16 120 120 HOH HOH B . O 4 HOH 17 121 121 HOH HOH B . O 4 HOH 18 122 122 HOH HOH B . O 4 HOH 19 123 123 HOH HOH B . O 4 HOH 20 124 124 HOH HOH B . O 4 HOH 21 125 125 HOH HOH B . O 4 HOH 22 126 126 HOH HOH B . O 4 HOH 23 127 127 HOH HOH B . O 4 HOH 24 128 128 HOH HOH B . O 4 HOH 25 129 129 HOH HOH B . O 4 HOH 26 130 130 HOH HOH B . O 4 HOH 27 131 131 HOH HOH B . O 4 HOH 28 132 132 HOH HOH B . O 4 HOH 29 133 133 HOH HOH B . O 4 HOH 30 134 134 HOH HOH B . O 4 HOH 31 135 135 HOH HOH B . O 4 HOH 32 136 136 HOH HOH B . O 4 HOH 33 138 138 HOH HOH B . O 4 HOH 34 139 139 HOH HOH B . O 4 HOH 35 140 140 HOH HOH B . O 4 HOH 36 141 141 HOH HOH B . O 4 HOH 37 142 142 HOH HOH B . O 4 HOH 38 143 143 HOH HOH B . O 4 HOH 39 144 144 HOH HOH B . O 4 HOH 40 145 145 HOH HOH B . O 4 HOH 41 146 146 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,F,G,H,I,N 2 1 B,J,K,L,M,O # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 "O3'" ? A U 9 ? A U 13 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 "O2'" ? A U 9 ? A U 13 ? 1_555 55.0 ? 2 "O3'" ? A U 9 ? A U 13 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O6 ? A G 35 ? A G 39 ? 1_555 124.9 ? 3 "O2'" ? A U 9 ? A U 13 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O6 ? A G 35 ? A G 39 ? 1_555 73.5 ? 4 OP1 ? A A 11 ? A A 15 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O ? N HOH . ? A HOH 133 ? 1_555 66.2 ? 5 OP1 ? A A 11 ? A A 15 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O ? N HOH . ? A HOH 141 ? 1_555 70.9 ? 6 O ? N HOH . ? A HOH 133 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O ? N HOH . ? A HOH 141 ? 1_555 88.0 ? 7 O6 ? B G 2 ? B G 6 ? 1_555 MG ? J MG . ? B MG 101 ? 1_555 O4 ? B U 68 ? B U 72 ? 1_555 75.1 ? 8 OP2 ? B A 10 ? B A 14 ? 1_555 MG ? K MG . ? B MG 102 ? 1_555 O6 ? B G 35 ? B G 39 ? 1_555 124.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-01-19 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' pdbx_struct_conn_angle 6 3 'Structure model' struct_conn 7 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 19 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 20 3 'Structure model' '_pdbx_struct_conn_angle.value' 21 3 'Structure model' '_struct_conn.pdbx_dist_value' 22 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 23 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 24 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 25 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 26 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 27 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 28 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 29 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 30 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 31 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 32 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 33 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 34 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 35 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 36 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 37 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CBASS 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.4_125)' ? 3 XDS 'data reduction' . ? 4 XSCALE 'data scaling' . ? 5 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" A U 38 ? ? "C2'" A U 38 ? ? "C1'" A U 38 ? ? 106.56 101.50 5.06 0.80 N 2 1 N1 A U 38 ? ? "C1'" A U 38 ? ? "C2'" A U 38 ? ? 104.06 112.00 -7.94 1.10 N 3 1 "C3'" A U 38 ? ? "O3'" A U 38 ? ? P A G 39 ? ? 134.94 119.70 15.24 1.20 Y 4 1 "O3'" A U 38 ? ? P A G 39 ? ? OP1 A G 39 ? ? 117.69 110.50 7.19 1.10 Y 5 1 N7 A A 55 ? ? C8 A A 55 ? ? N9 A A 55 ? ? 116.90 113.80 3.10 0.50 N 6 1 C8 A A 55 ? ? N9 A A 55 ? ? C4 A A 55 ? ? 102.97 105.80 -2.83 0.40 N 7 1 C4 A A 55 ? ? N9 A A 55 ? ? "C1'" A A 55 ? ? 138.50 126.30 12.20 1.80 N 8 1 "C3'" A A 55 ? ? "O3'" A A 55 ? ? P A A 56 ? ? 134.27 119.70 14.57 1.20 Y 9 1 "O4'" B U 13 ? ? "C1'" B U 13 ? ? N1 B U 13 ? ? 103.31 108.20 -4.89 0.80 N 10 1 "C3'" B U 13 ? ? "O3'" B U 13 ? ? P B A 14 ? ? 137.10 119.70 17.40 1.20 Y # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A 23G 74 ? A 23G 70 2 1 Y 1 B 23G 74 ? B 23G 70 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 23G P P N N 1 23G N1 N N N 2 23G C2 C N N 3 23G N2 N N N 4 23G N3 N N N 5 23G C4 C Y N 6 23G C5 C Y N 7 23G C6 C N N 8 23G O6 O N N 9 23G N7 N Y N 10 23G C8 C Y N 11 23G N9 N Y N 12 23G PC P N N 13 23G "C1'" C N R 14 23G "C2'" C N R 15 23G "O2'" O N N 16 23G "C3'" C N R 17 23G "O3'" O N N 18 23G "C4'" C N R 19 23G "O4'" O N N 20 23G "C5'" C N N 21 23G "O5'" O N N 22 23G OC1 O N N 23 23G OC2 O N N 24 23G OP1 O N N 25 23G OP2 O N N 26 23G HN1 H N N 27 23G HN2 H N N 28 23G HN2A H N N 29 23G H8 H N N 30 23G "H1'" H N N 31 23G "H2'" H N N 32 23G "H3'" H N N 33 23G "H4'" H N N 34 23G "H5'" H N N 35 23G "H5'A" H N N 36 23G OP3 O N N 37 23G H11 H N N 38 23G HOP2 H N N 39 23G HOP3 H N N 40 A OP3 O N N 41 A P P N N 42 A OP1 O N N 43 A OP2 O N N 44 A "O5'" O N N 45 A "C5'" C N N 46 A "C4'" C N R 47 A "O4'" O N N 48 A "C3'" C N S 49 A "O3'" O N N 50 A "C2'" C N R 51 A "O2'" O N N 52 A "C1'" C N R 53 A N9 N Y N 54 A C8 C Y N 55 A N7 N Y N 56 A C5 C Y N 57 A C6 C Y N 58 A N6 N N N 59 A N1 N Y N 60 A C2 C Y N 61 A N3 N Y N 62 A C4 C Y N 63 A HOP3 H N N 64 A HOP2 H N N 65 A "H5'" H N N 66 A "H5''" H N N 67 A "H4'" H N N 68 A "H3'" H N N 69 A "HO3'" H N N 70 A "H2'" H N N 71 A "HO2'" H N N 72 A "H1'" H N N 73 A H8 H N N 74 A H61 H N N 75 A H62 H N N 76 A H2 H N N 77 BR BR BR N N 78 C OP3 O N N 79 C P P N N 80 C OP1 O N N 81 C OP2 O N N 82 C "O5'" O N N 83 C "C5'" C N N 84 C "C4'" C N R 85 C "O4'" O N N 86 C "C3'" C N S 87 C "O3'" O N N 88 C "C2'" C N R 89 C "O2'" O N N 90 C "C1'" C N R 91 C N1 N N N 92 C C2 C N N 93 C O2 O N N 94 C N3 N N N 95 C C4 C N N 96 C N4 N N N 97 C C5 C N N 98 C C6 C N N 99 C HOP3 H N N 100 C HOP2 H N N 101 C "H5'" H N N 102 C "H5''" H N N 103 C "H4'" H N N 104 C "H3'" H N N 105 C "HO3'" H N N 106 C "H2'" H N N 107 C "HO2'" H N N 108 C "H1'" H N N 109 C H41 H N N 110 C H42 H N N 111 C H5 H N N 112 C H6 H N N 113 G OP3 O N N 114 G P P N N 115 G OP1 O N N 116 G OP2 O N N 117 G "O5'" O N N 118 G "C5'" C N N 119 G "C4'" C N R 120 G "O4'" O N N 121 G "C3'" C N S 122 G "O3'" O N N 123 G "C2'" C N R 124 G "O2'" O N N 125 G "C1'" C N R 126 G N9 N Y N 127 G C8 C Y N 128 G N7 N Y N 129 G C5 C Y N 130 G C6 C N N 131 G O6 O N N 132 G N1 N N N 133 G C2 C N N 134 G N2 N N N 135 G N3 N N N 136 G C4 C Y N 137 G HOP3 H N N 138 G HOP2 H N N 139 G "H5'" H N N 140 G "H5''" H N N 141 G "H4'" H N N 142 G "H3'" H N N 143 G "HO3'" H N N 144 G "H2'" H N N 145 G "HO2'" H N N 146 G "H1'" H N N 147 G H8 H N N 148 G H1 H N N 149 G H21 H N N 150 G H22 H N N 151 HOH O O N N 152 HOH H1 H N N 153 HOH H2 H N N 154 MG MG MG N N 155 U OP3 O N N 156 U P P N N 157 U OP1 O N N 158 U OP2 O N N 159 U "O5'" O N N 160 U "C5'" C N N 161 U "C4'" C N R 162 U "O4'" O N N 163 U "C3'" C N S 164 U "O3'" O N N 165 U "C2'" C N R 166 U "O2'" O N N 167 U "C1'" C N R 168 U N1 N N N 169 U C2 C N N 170 U O2 O N N 171 U N3 N N N 172 U C4 C N N 173 U O4 O N N 174 U C5 C N N 175 U C6 C N N 176 U HOP3 H N N 177 U HOP2 H N N 178 U "H5'" H N N 179 U "H5''" H N N 180 U "H4'" H N N 181 U "H3'" H N N 182 U "HO3'" H N N 183 U "H2'" H N N 184 U "HO2'" H N N 185 U "H1'" H N N 186 U H3 H N N 187 U H5 H N N 188 U H6 H N N 189 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 23G P "O5'" sing N N 1 23G P OP1 doub N N 2 23G P OP2 sing N N 3 23G N1 C2 sing N N 4 23G N1 C6 sing N N 5 23G N1 HN1 sing N N 6 23G C2 N2 sing N N 7 23G C2 N3 doub N N 8 23G N2 HN2 sing N N 9 23G N2 HN2A sing N N 10 23G N3 C4 sing N N 11 23G C4 C5 doub Y N 12 23G C4 N9 sing Y N 13 23G C5 C6 sing N N 14 23G C5 N7 sing Y N 15 23G C6 O6 doub N N 16 23G N7 C8 doub Y N 17 23G C8 N9 sing Y N 18 23G C8 H8 sing N N 19 23G N9 "C1'" sing N N 20 23G PC "O2'" sing N N 21 23G PC "O3'" sing N N 22 23G PC OC1 sing N N 23 23G PC OC2 doub N N 24 23G "C1'" "C2'" sing N N 25 23G "C1'" "O4'" sing N N 26 23G "C1'" "H1'" sing N N 27 23G "C2'" "O2'" sing N N 28 23G "C2'" "C3'" sing N N 29 23G "C2'" "H2'" sing N N 30 23G "C3'" "O3'" sing N N 31 23G "C3'" "C4'" sing N N 32 23G "C3'" "H3'" sing N N 33 23G "C4'" "O4'" sing N N 34 23G "C4'" "C5'" sing N N 35 23G "C4'" "H4'" sing N N 36 23G "C5'" "O5'" sing N N 37 23G "C5'" "H5'" sing N N 38 23G "C5'" "H5'A" sing N N 39 23G P OP3 sing N N 40 23G OC1 H11 sing N N 41 23G OP2 HOP2 sing N N 42 23G OP3 HOP3 sing N N 43 A OP3 P sing N N 44 A OP3 HOP3 sing N N 45 A P OP1 doub N N 46 A P OP2 sing N N 47 A P "O5'" sing N N 48 A OP2 HOP2 sing N N 49 A "O5'" "C5'" sing N N 50 A "C5'" "C4'" sing N N 51 A "C5'" "H5'" sing N N 52 A "C5'" "H5''" sing N N 53 A "C4'" "O4'" sing N N 54 A "C4'" "C3'" sing N N 55 A "C4'" "H4'" sing N N 56 A "O4'" "C1'" sing N N 57 A "C3'" "O3'" sing N N 58 A "C3'" "C2'" sing N N 59 A "C3'" "H3'" sing N N 60 A "O3'" "HO3'" sing N N 61 A "C2'" "O2'" sing N N 62 A "C2'" "C1'" sing N N 63 A "C2'" "H2'" sing N N 64 A "O2'" "HO2'" sing N N 65 A "C1'" N9 sing N N 66 A "C1'" "H1'" sing N N 67 A N9 C8 sing Y N 68 A N9 C4 sing Y N 69 A C8 N7 doub Y N 70 A C8 H8 sing N N 71 A N7 C5 sing Y N 72 A C5 C6 sing Y N 73 A C5 C4 doub Y N 74 A C6 N6 sing N N 75 A C6 N1 doub Y N 76 A N6 H61 sing N N 77 A N6 H62 sing N N 78 A N1 C2 sing Y N 79 A C2 N3 doub Y N 80 A C2 H2 sing N N 81 A N3 C4 sing Y N 82 C OP3 P sing N N 83 C OP3 HOP3 sing N N 84 C P OP1 doub N N 85 C P OP2 sing N N 86 C P "O5'" sing N N 87 C OP2 HOP2 sing N N 88 C "O5'" "C5'" sing N N 89 C "C5'" "C4'" sing N N 90 C "C5'" "H5'" sing N N 91 C "C5'" "H5''" sing N N 92 C "C4'" "O4'" sing N N 93 C "C4'" "C3'" sing N N 94 C "C4'" "H4'" sing N N 95 C "O4'" "C1'" sing N N 96 C "C3'" "O3'" sing N N 97 C "C3'" "C2'" sing N N 98 C "C3'" "H3'" sing N N 99 C "O3'" "HO3'" sing N N 100 C "C2'" "O2'" sing N N 101 C "C2'" "C1'" sing N N 102 C "C2'" "H2'" sing N N 103 C "O2'" "HO2'" sing N N 104 C "C1'" N1 sing N N 105 C "C1'" "H1'" sing N N 106 C N1 C2 sing N N 107 C N1 C6 sing N N 108 C C2 O2 doub N N 109 C C2 N3 sing N N 110 C N3 C4 doub N N 111 C C4 N4 sing N N 112 C C4 C5 sing N N 113 C N4 H41 sing N N 114 C N4 H42 sing N N 115 C C5 C6 doub N N 116 C C5 H5 sing N N 117 C C6 H6 sing N N 118 G OP3 P sing N N 119 G OP3 HOP3 sing N N 120 G P OP1 doub N N 121 G P OP2 sing N N 122 G P "O5'" sing N N 123 G OP2 HOP2 sing N N 124 G "O5'" "C5'" sing N N 125 G "C5'" "C4'" sing N N 126 G "C5'" "H5'" sing N N 127 G "C5'" "H5''" sing N N 128 G "C4'" "O4'" sing N N 129 G "C4'" "C3'" sing N N 130 G "C4'" "H4'" sing N N 131 G "O4'" "C1'" sing N N 132 G "C3'" "O3'" sing N N 133 G "C3'" "C2'" sing N N 134 G "C3'" "H3'" sing N N 135 G "O3'" "HO3'" sing N N 136 G "C2'" "O2'" sing N N 137 G "C2'" "C1'" sing N N 138 G "C2'" "H2'" sing N N 139 G "O2'" "HO2'" sing N N 140 G "C1'" N9 sing N N 141 G "C1'" "H1'" sing N N 142 G N9 C8 sing Y N 143 G N9 C4 sing Y N 144 G C8 N7 doub Y N 145 G C8 H8 sing N N 146 G N7 C5 sing Y N 147 G C5 C6 sing N N 148 G C5 C4 doub Y N 149 G C6 O6 doub N N 150 G C6 N1 sing N N 151 G N1 C2 sing N N 152 G N1 H1 sing N N 153 G C2 N2 sing N N 154 G C2 N3 doub N N 155 G N2 H21 sing N N 156 G N2 H22 sing N N 157 G N3 C4 sing N N 158 HOH O H1 sing N N 159 HOH O H2 sing N N 160 U OP3 P sing N N 161 U OP3 HOP3 sing N N 162 U P OP1 doub N N 163 U P OP2 sing N N 164 U P "O5'" sing N N 165 U OP2 HOP2 sing N N 166 U "O5'" "C5'" sing N N 167 U "C5'" "C4'" sing N N 168 U "C5'" "H5'" sing N N 169 U "C5'" "H5''" sing N N 170 U "C4'" "O4'" sing N N 171 U "C4'" "C3'" sing N N 172 U "C4'" "H4'" sing N N 173 U "O4'" "C1'" sing N N 174 U "C3'" "O3'" sing N N 175 U "C3'" "C2'" sing N N 176 U "C3'" "H3'" sing N N 177 U "O3'" "HO3'" sing N N 178 U "C2'" "O2'" sing N N 179 U "C2'" "C1'" sing N N 180 U "C2'" "H2'" sing N N 181 U "O2'" "HO2'" sing N N 182 U "C1'" N1 sing N N 183 U "C1'" "H1'" sing N N 184 U N1 C2 sing N N 185 U N1 C6 sing N N 186 U C2 O2 doub N N 187 U C2 N3 sing N N 188 U N3 C4 sing N N 189 U N3 H3 sing N N 190 U C4 O4 doub N N 191 U C4 C5 sing N N 192 U C5 C6 doub N N 193 U C5 H5 sing N N 194 U C6 H6 sing N N 195 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3IVN 'double helix' 3IVN 'a-form double helix' 3IVN 'hairpin loop' 3IVN 'mismatched base pair' 3IVN 'internal loop' 3IVN 'three-way junction' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 69 1_555 -0.511 -0.184 0.695 0.825 -10.091 6.675 1 A_G5:C73_A A 5 ? A 73 ? 19 1 1 A G 2 1_555 A U 68 1_555 -2.366 -0.523 0.043 3.007 -15.330 -1.062 2 A_G6:U72_A A 6 ? A 72 ? 28 1 1 A C 3 1_555 A G 67 1_555 -0.276 0.036 0.052 4.820 -11.239 -9.610 3 A_C7:G71_A A 7 ? A 71 ? 19 1 1 A C 4 1_555 A G 66 1_555 -0.956 -0.031 -0.549 4.991 -14.486 -5.767 4 A_C8:G70_A A 8 ? A 70 ? 19 1 1 A A 5 1_555 A U 65 1_555 0.248 -0.237 0.155 -5.584 0.765 -1.740 5 A_A9:U69_A A 9 ? A 69 ? 20 1 1 A G 6 1_555 A C 64 1_555 -0.245 0.297 0.021 -10.668 -18.997 5.994 6 A_G10:C68_A A 10 ? A 68 ? ? 1 1 A U 7 1_555 A A 63 1_555 0.338 0.195 -0.150 -7.719 -20.954 2.869 7 A_U11:A67_A A 11 ? A 67 ? 20 1 1 A A 8 1_555 A U 62 1_555 0.288 0.279 0.416 -0.674 -6.171 -7.464 8 A_A12:U66_A A 12 ? A 66 ? 20 1 1 A G 35 1_555 A C 61 1_555 -0.223 0.174 0.476 -32.939 -38.791 -0.875 9 A_G39:C65_A A 39 ? A 65 ? ? 1 1 A A 39 1_555 A U 9 1_555 0.003 0.132 -0.155 -10.867 -7.037 12.484 10 A_A43:U13_A A 43 ? A 13 ? ? 1 1 A C 40 1_555 A G 33 1_555 0.600 0.356 -0.354 11.560 13.754 0.666 11 A_C44:G37_A A 44 ? A 37 ? ? 1 1 A C 12 1_555 A G 32 1_555 0.285 -0.025 -0.105 15.857 -7.143 -7.099 12 A_C16:G36_A A 16 ? A 36 ? 19 1 1 A C 13 1_555 A G 31 1_555 0.782 -0.193 -0.048 7.371 -18.195 3.551 13 A_C17:G35_A A 17 ? A 35 ? 19 1 1 A U 14 1_555 A A 30 1_555 0.347 -0.015 0.187 -6.703 -7.375 7.084 14 A_U18:A34_A A 18 ? A 34 ? 20 1 1 A C 15 1_555 A G 29 1_555 0.173 0.055 0.425 -2.630 -4.845 0.572 15 A_C19:G33_A A 19 ? A 33 ? 19 1 1 A A 16 1_555 A U 28 1_555 0.414 0.208 -0.069 2.483 -10.722 2.079 16 A_A20:U32_A A 20 ? A 32 ? 20 1 1 A A 17 1_555 A U 27 1_555 0.246 0.496 -0.403 6.123 -10.001 2.649 17 A_A21:U31_A A 21 ? A 31 ? ? ? 1 A U 18 1_555 A U 26 1_555 2.630 -2.313 0.258 -11.312 -16.670 9.864 18 A_U22:U30_A A 22 ? A 30 ? 16 1 1 A G 24 1_555 A C 48 1_555 -0.300 -0.084 0.442 2.064 -9.550 -12.624 19 A_G28:C52_A A 28 ? A 52 ? 19 1 1 A G 25 1_555 A C 47 1_555 0.393 0.074 0.695 13.335 -1.416 -6.287 20 A_G29:C51_A A 29 ? A 51 ? 19 1 1 A A 20 1_555 A A 53 1_555 4.329 2.197 -0.481 -2.310 -12.939 -118.567 21 A_A24:A57_A A 24 ? A 57 ? ? ? 1 A U 21 1_555 A A 52 1_555 4.234 -1.993 -1.098 -1.726 -14.171 -99.152 22 A_U25:A56_A A 25 ? A 56 ? 24 4 1 A C 41 1_555 A G 59 1_555 0.036 0.058 -0.618 -8.889 -3.270 -2.322 23 A_C45:G63_A A 45 ? A 63 ? 19 1 1 A A 42 1_555 A U 58 1_555 0.410 0.013 0.057 -5.983 -9.097 4.260 24 A_A46:U62_A A 46 ? A 62 ? 20 1 1 A G 43 1_555 A C 57 1_555 0.039 0.134 -0.246 2.228 -15.059 -3.185 25 A_G47:C61_A A 47 ? A 61 ? 19 1 1 A G 44 1_555 A C 56 1_555 -0.648 0.399 -0.125 -3.816 -11.065 4.925 26 A_G48:C60_A A 48 ? A 60 ? ? 1 1 A A 45 1_555 A U 55 1_555 -0.262 0.066 0.000 2.092 -3.560 -6.049 27 A_A49:U59_A A 49 ? A 59 ? 20 1 1 A G 49 1_555 A U 50 1_555 7.802 1.382 0.557 2.834 4.410 22.839 28 A_G53:U54_A A 53 ? A 54 ? ? 9 1 B G 1 1_555 B C 69 1_555 -0.534 0.187 0.007 0.278 -10.498 0.237 29 B_G5:C73_B B 5 ? B 73 ? 19 1 1 B G 2 1_555 B U 68 1_555 -2.074 -0.281 -0.198 -2.057 -8.777 8.459 30 B_G6:U72_B B 6 ? B 72 ? 28 1 1 B C 3 1_555 B G 67 1_555 0.331 0.145 -0.460 6.323 -17.168 -1.452 31 B_C7:G71_B B 7 ? B 71 ? 19 1 1 B C 4 1_555 B G 66 1_555 0.396 0.126 -0.011 -3.420 -11.195 -3.716 32 B_C8:G70_B B 8 ? B 70 ? 19 1 1 B A 5 1_555 B U 65 1_555 0.018 0.182 0.282 -2.506 -14.644 2.603 33 B_A9:U69_B B 9 ? B 69 ? 20 1 1 B G 6 1_555 B C 64 1_555 0.107 0.031 0.167 -12.102 -21.089 1.427 34 B_G10:C68_B B 10 ? B 68 ? 19 1 1 B U 7 1_555 B A 63 1_555 0.507 0.257 0.132 -17.451 -14.266 0.171 35 B_U11:A67_B B 11 ? B 67 ? 20 1 1 B A 8 1_555 B U 62 1_555 -0.156 -0.118 -0.104 -3.557 -2.125 -4.895 36 B_A12:U66_B B 12 ? B 66 ? 20 1 1 B G 35 1_555 B C 61 1_555 -0.276 0.409 0.562 -28.292 -33.335 -7.484 37 B_G39:C65_B B 39 ? B 65 ? ? ? 1 B A 39 1_555 B U 9 1_555 -0.364 0.028 -0.302 -16.906 -0.766 0.782 38 B_A43:U13_B B 43 ? B 13 ? 20 1 1 B C 40 1_555 B G 33 1_555 -0.493 0.350 -0.567 13.270 7.802 -4.763 39 B_C44:G37_B B 44 ? B 37 ? 19 1 1 B C 12 1_555 B G 32 1_555 -0.394 0.251 0.096 11.164 -2.423 2.276 40 B_C16:G36_B B 16 ? B 36 ? 19 1 1 B C 13 1_555 B G 31 1_555 -0.039 -0.130 -0.947 9.964 -6.959 -5.774 41 B_C17:G35_B B 17 ? B 35 ? 19 1 1 B U 14 1_555 B A 30 1_555 0.071 0.375 -0.506 -0.471 19.256 1.209 42 B_U18:A34_B B 18 ? B 34 ? ? ? 1 B C 15 1_555 B G 29 1_555 0.605 -0.782 -0.491 -0.479 -3.178 2.165 43 B_C19:G33_B B 19 ? B 33 ? 19 1 1 B A 16 1_555 B U 28 1_555 -0.331 -0.011 0.213 1.256 -9.882 0.859 44 B_A20:U32_B B 20 ? B 32 ? 20 1 1 B A 17 1_555 B U 27 1_555 2.477 -0.440 -1.021 0.355 -16.951 -30.950 45 B_A21:U31_B B 21 ? B 31 ? 20 1 1 B U 18 1_555 B U 26 1_555 2.313 -1.356 0.647 15.235 -8.632 12.432 46 B_U22:U30_B B 22 ? B 30 ? 16 1 1 B A 22 1_555 B A 51 1_555 1.974 -5.909 0.582 -6.877 -3.489 119.129 47 B_A26:A55_B B 26 ? B 55 ? ? ? 1 B G 24 1_555 B C 48 1_555 0.290 -0.119 0.434 -2.587 -13.840 -9.547 48 B_G28:C52_B B 28 ? B 52 ? 19 1 1 B A 52 1_555 B U 21 1_555 -4.727 -2.032 0.115 -1.546 -13.676 -99.732 49 B_A56:U25_B B 56 ? B 25 ? 24 4 1 B G 25 1_555 B C 47 1_555 0.950 0.354 0.879 15.924 -14.859 -0.889 50 B_G29:C51_B B 29 ? B 51 ? ? 1 1 B C 41 1_555 B G 59 1_555 -0.192 -0.027 -0.464 1.891 -12.724 -0.985 51 B_C45:G63_B B 45 ? B 63 ? 19 1 1 B A 42 1_555 B U 58 1_555 0.346 0.208 0.008 -3.061 -8.666 2.353 52 B_A46:U62_B B 46 ? B 62 ? 20 1 1 B G 43 1_555 B C 57 1_555 -0.083 -0.304 0.015 2.639 -15.665 -7.663 53 B_G47:C61_B B 47 ? B 61 ? 19 1 1 B G 44 1_555 B C 56 1_555 0.353 -0.039 0.317 -0.140 -11.005 -2.778 54 B_G48:C60_B B 48 ? B 60 ? 19 1 1 B A 45 1_555 B U 55 1_555 0.095 -0.483 0.156 7.837 -1.554 -4.966 55 B_A49:U59_B B 49 ? B 59 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 69 1_555 A G 2 1_555 A U 68 1_555 -0.412 -1.919 2.922 1.281 7.970 23.020 -6.525 1.293 2.121 19.228 -3.090 24.376 1 AA_G5G6:U72C73_AA A 5 ? A 73 ? A 6 ? A 72 ? 1 A G 2 1_555 A U 68 1_555 A C 3 1_555 A G 67 1_555 -0.264 -1.308 3.167 -4.126 11.301 41.998 -2.764 -0.012 2.755 15.392 5.620 43.612 2 AA_G6C7:G71U72_AA A 6 ? A 72 ? A 7 ? A 71 ? 1 A C 3 1_555 A G 67 1_555 A C 4 1_555 A G 66 1_555 0.131 -1.685 3.085 5.252 12.078 28.947 -4.966 0.580 2.213 22.736 -9.886 31.744 3 AA_C7C8:G70G71_AA A 7 ? A 71 ? A 8 ? A 70 ? 1 A C 4 1_555 A G 66 1_555 A A 5 1_555 A U 65 1_555 0.918 -1.812 3.561 -4.897 11.713 35.182 -4.358 -2.073 2.695 18.644 7.795 37.334 4 AA_C8A9:U69G70_AA A 8 ? A 70 ? A 9 ? A 69 ? 1 A A 5 1_555 A U 65 1_555 A G 6 1_555 A C 64 1_555 0.829 -2.096 3.269 6.546 8.338 31.144 -5.056 -0.407 2.745 14.996 -11.772 32.856 5 AA_A9G10:C68U69_AA A 9 ? A 69 ? A 10 ? A 68 ? 1 A G 6 1_555 A C 64 1_555 A U 7 1_555 A A 63 1_555 -0.767 -1.205 3.085 3.447 5.200 34.028 -2.754 1.772 2.787 8.793 -5.829 34.579 6 AA_G10U11:A67C68_AA A 10 ? A 68 ? A 11 ? A 67 ? 1 A U 7 1_555 A A 63 1_555 A A 8 1_555 A U 62 1_555 0.290 -1.457 2.899 -1.690 15.960 27.507 -4.918 -0.769 1.785 30.497 3.228 31.769 7 AA_U11A12:U66A67_AA A 11 ? A 67 ? A 12 ? A 66 ? 1 A A 8 1_555 A U 62 1_555 A G 35 1_555 A C 61 1_555 -0.727 -1.486 3.971 -2.222 -1.620 44.141 -1.789 0.711 4.050 -2.153 2.954 44.222 8 AA_A12G39:C65U66_AA A 12 ? A 66 ? A 39 ? A 65 ? 1 A G 35 1_555 A C 61 1_555 A A 39 1_555 A U 9 1_555 2.689 4.219 2.765 0.630 3.831 121.608 2.386 -1.535 2.852 2.194 -0.361 121.645 9 AA_G39A43:U13C65_AA A 39 ? A 65 ? A 43 ? A 13 ? 1 A A 39 1_555 A U 9 1_555 A C 40 1_555 A G 33 1_555 1.496 -0.170 2.895 0.639 10.123 44.319 -1.012 -1.888 2.813 13.214 -0.835 45.408 10 AA_A43C44:G37U13_AA A 43 ? A 13 ? A 44 ? A 37 ? 1 A C 40 1_555 A G 33 1_555 A C 12 1_555 A G 32 1_555 -3.301 -0.753 3.043 -12.240 -0.957 49.748 -0.802 2.936 3.718 -1.118 14.299 51.147 11 AA_C44C16:G36G37_AA A 44 ? A 37 ? A 16 ? A 36 ? 1 A C 12 1_555 A G 32 1_555 A C 13 1_555 A G 31 1_555 0.139 -2.087 3.508 0.262 4.090 30.912 -4.686 -0.208 3.213 7.631 -0.489 31.176 12 AA_C16C17:G35G36_AA A 16 ? A 36 ? A 17 ? A 35 ? 1 A C 13 1_555 A G 31 1_555 A U 14 1_555 A A 30 1_555 -0.498 -2.050 3.536 -3.639 8.609 27.511 -5.982 0.193 2.820 17.476 7.388 29.026 13 AA_C17U18:A34G35_AA A 17 ? A 35 ? A 18 ? A 34 ? 1 A U 14 1_555 A A 30 1_555 A C 15 1_555 A G 29 1_555 -0.362 -1.881 3.148 -0.759 4.980 30.733 -4.379 0.541 2.824 9.317 1.421 31.133 14 AA_U18C19:G33A34_AA A 18 ? A 34 ? A 19 ? A 33 ? 1 A C 15 1_555 A G 29 1_555 A A 16 1_555 A U 28 1_555 0.219 -1.699 3.087 3.741 5.689 30.484 -4.132 0.234 2.739 10.652 -7.005 31.217 15 AA_C19A20:U32G33_AA A 19 ? A 33 ? A 20 ? A 32 ? 1 A A 16 1_555 A U 28 1_555 A A 17 1_555 A U 27 1_555 -0.002 -1.646 3.181 -0.927 11.934 24.746 -6.005 -0.192 2.168 25.993 2.019 27.448 16 AA_A20A21:U31U32_AA A 20 ? A 32 ? A 21 ? A 31 ? 1 A A 17 1_555 A U 27 1_555 A U 18 1_555 A U 26 1_555 0.226 -0.833 3.873 -3.329 9.550 45.465 -1.986 -0.611 3.613 12.179 4.246 46.518 17 AA_A21U22:U30U31_AA A 21 ? A 31 ? A 22 ? A 30 ? 1 A G 24 1_555 A C 48 1_555 A G 25 1_555 A C 47 1_555 0.525 -0.720 3.133 -1.593 3.833 33.308 -1.839 -1.155 3.006 6.655 2.766 33.558 18 AA_G28G29:C51C52_AA A 28 ? A 52 ? A 29 ? A 51 ? 1 A G 25 1_555 A C 47 1_555 A A 20 1_555 A A 53 1_555 -2.121 -5.054 -3.578 78.889 144.290 -124.992 2.986 -1.311 -0.681 -72.908 39.862 -172.835 19 AA_G29A24:A57C51_AA A 29 ? A 51 ? A 24 ? A 57 ? 1 A A 20 1_555 A A 53 1_555 A U 21 1_555 A A 52 1_555 0.228 -1.513 3.294 9.585 2.406 39.250 -2.460 0.750 3.167 3.515 -14.001 40.427 20 AA_A24U25:A56A57_AA A 24 ? A 57 ? A 25 ? A 56 ? 1 A C 41 1_555 A G 59 1_555 A A 42 1_555 A U 58 1_555 0.211 -1.351 3.283 -2.423 7.351 29.909 -3.898 -0.845 2.852 13.951 4.598 30.872 21 AA_C45A46:U62G63_AA A 45 ? A 63 ? A 46 ? A 62 ? 1 A A 42 1_555 A U 58 1_555 A G 43 1_555 A C 57 1_555 -0.501 -1.510 3.134 3.555 8.833 31.810 -3.967 1.410 2.565 15.681 -6.311 33.169 22 AA_A46G47:C61U62_AA A 46 ? A 62 ? A 47 ? A 61 ? 1 A G 43 1_555 A C 57 1_555 A G 44 1_555 A C 56 1_555 0.994 -1.613 3.470 0.499 1.081 28.186 -3.575 -1.916 3.424 2.218 -1.025 28.211 23 AA_G47G48:C60C61_AA A 47 ? A 61 ? A 48 ? A 60 ? 1 A G 44 1_555 A C 56 1_555 A A 45 1_555 A U 55 1_555 -0.240 -1.840 3.123 -3.680 7.479 29.785 -4.747 -0.187 2.605 14.204 6.989 30.904 24 AA_G48A49:U59C60_AA A 48 ? A 60 ? A 49 ? A 59 ? 1 B G 1 1_555 B C 69 1_555 B G 2 1_555 B U 68 1_555 -0.229 -1.767 3.017 -5.454 12.986 27.976 -5.288 -0.419 2.026 24.957 10.482 31.258 25 BB_G5G6:U72C73_BB B 5 ? B 73 ? B 6 ? B 72 ? 1 B G 2 1_555 B U 68 1_555 B C 3 1_555 B G 67 1_555 -0.349 -1.052 3.116 -1.182 8.114 41.701 -2.215 0.371 2.880 11.267 1.641 42.464 26 BB_G6C7:G71U72_BB B 6 ? B 72 ? B 7 ? B 71 ? 1 B C 3 1_555 B G 67 1_555 B C 4 1_555 B G 66 1_555 -0.542 -1.569 3.460 -2.193 14.800 31.896 -4.731 0.581 2.538 25.267 3.744 35.148 27 BB_C7C8:G70G71_BB B 7 ? B 71 ? B 8 ? B 70 ? 1 B C 4 1_555 B G 66 1_555 B A 5 1_555 B U 65 1_555 0.872 -1.677 3.122 1.201 7.326 28.949 -4.622 -1.468 2.660 14.359 -2.355 29.866 28 BB_C8A9:U69G70_BB B 8 ? B 70 ? B 9 ? B 69 ? 1 B A 5 1_555 B U 65 1_555 B G 6 1_555 B C 64 1_555 -0.270 -1.498 3.331 1.817 10.290 36.561 -3.558 0.636 2.807 16.004 -2.826 37.976 29 BB_A9G10:C68U69_BB B 9 ? B 69 ? B 10 ? B 68 ? 1 B G 6 1_555 B C 64 1_555 B U 7 1_555 B A 63 1_555 -0.184 -1.455 3.414 1.432 4.423 33.376 -3.240 0.553 3.190 7.655 -2.478 33.689 30 BB_G10U11:A67C68_BB B 10 ? B 68 ? B 11 ? B 67 ? 1 B U 7 1_555 B A 63 1_555 B A 8 1_555 B U 62 1_555 0.517 -1.379 2.974 2.586 11.444 25.250 -5.151 -0.561 2.195 24.559 -5.550 27.803 31 BB_U11A12:U66A67_BB B 11 ? B 67 ? B 12 ? B 66 ? 1 B A 8 1_555 B U 62 1_555 B G 35 1_555 B C 61 1_555 -1.133 -1.786 3.870 -7.369 -6.134 42.243 -1.673 0.636 4.209 -8.381 10.070 43.269 32 BB_A12G39:C65U66_BB B 12 ? B 66 ? B 39 ? B 65 ? 1 B G 35 1_555 B C 61 1_555 B A 39 1_555 B U 9 1_555 2.473 3.594 3.217 -6.149 4.469 119.943 2.032 -1.485 3.219 2.580 3.549 120.089 33 BB_G39A43:U13C65_BB B 39 ? B 65 ? B 43 ? B 13 ? 1 B A 39 1_555 B U 9 1_555 B C 40 1_555 B G 33 1_555 1.463 -0.486 2.974 1.474 3.266 40.744 -1.021 -1.947 2.977 4.679 -2.113 40.895 34 BB_A43C44:G37U13_BB B 43 ? B 13 ? B 44 ? B 37 ? 1 B C 40 1_555 B G 33 1_555 B C 12 1_555 B G 32 1_555 -2.329 -0.957 3.283 -16.264 0.984 51.878 -1.117 1.451 3.786 1.094 18.089 54.207 35 BB_C44C16:G36G37_BB B 44 ? B 37 ? B 16 ? B 36 ? 1 B C 12 1_555 B G 32 1_555 B C 13 1_555 B G 31 1_555 -0.123 -1.668 3.234 9.533 1.385 37.106 -2.712 1.355 3.050 2.133 -14.680 38.293 36 BB_C16C17:G35G36_BB B 16 ? B 36 ? B 17 ? B 35 ? 1 B C 13 1_555 B G 31 1_555 B U 14 1_555 B A 30 1_555 0.343 -2.086 3.958 -8.732 2.647 26.825 -4.981 -3.059 3.459 5.507 18.167 28.307 37 BB_C17U18:A34G35_BB B 17 ? B 35 ? B 18 ? B 34 ? 1 B U 14 1_555 B A 30 1_555 B C 15 1_555 B G 29 1_555 0.691 -1.460 3.028 8.642 9.235 32.270 -3.730 0.031 2.618 15.874 -14.856 34.599 38 BB_U18C19:G33A34_BB B 18 ? B 34 ? B 19 ? B 33 ? 1 B C 15 1_555 B G 29 1_555 B A 16 1_555 B U 28 1_555 0.222 -1.873 2.838 -3.540 14.072 27.184 -5.547 -0.925 1.650 27.586 6.940 30.750 39 BB_C19A20:U32G33_BB B 19 ? B 33 ? B 20 ? B 32 ? 1 B A 16 1_555 B U 28 1_555 B A 17 1_555 B U 27 1_555 -1.985 -1.921 3.495 2.980 6.422 39.537 -3.532 3.233 3.008 9.402 -4.363 40.141 40 BB_A20A21:U31U32_BB B 20 ? B 32 ? B 21 ? B 31 ? 1 B A 17 1_555 B U 27 1_555 B U 18 1_555 B U 26 1_555 1.073 -2.149 2.782 -11.343 0.895 33.502 -3.646 -3.095 2.255 1.500 19.008 35.329 41 BB_A21U22:U30U31_BB B 21 ? B 31 ? B 22 ? B 30 ? 1 B A 22 1_555 B A 51 1_555 B G 24 1_555 B C 48 1_555 -1.995 -3.247 3.781 104.492 -134.754 -92.740 2.510 -0.313 1.816 68.409 53.046 -173.463 42 BB_A26G28:C52A55_BB B 26 ? B 55 ? B 28 ? B 52 ? 1 B G 24 1_555 B C 48 1_555 B A 52 1_555 B U 21 1_555 -5.883 4.323 -1.140 2.895 13.879 109.040 2.697 3.587 -0.870 8.500 -1.773 109.663 43 BB_G28A56:U25C52_BB B 28 ? B 52 ? B 56 ? B 25 ? 1 B C 41 1_555 B G 59 1_555 B A 42 1_555 B U 58 1_555 0.099 -1.213 3.480 -3.963 11.562 30.812 -4.081 -0.843 2.821 20.765 7.118 33.093 44 BB_C45A46:U62G63_BB B 45 ? B 63 ? B 46 ? B 62 ? 1 B A 42 1_555 B U 58 1_555 B G 43 1_555 B C 57 1_555 -0.042 -1.480 3.111 0.095 6.197 27.303 -4.386 0.107 2.715 12.919 -0.197 27.984 45 BB_A46G47:C61U62_BB B 46 ? B 62 ? B 47 ? B 61 ? 1 B G 43 1_555 B C 57 1_555 B G 44 1_555 B C 56 1_555 0.657 -1.985 3.313 1.621 3.542 35.240 -3.774 -0.844 3.132 5.828 -2.668 35.448 46 BB_G47G48:C60C61_BB B 47 ? B 61 ? B 48 ? B 60 ? 1 B G 44 1_555 B C 56 1_555 B A 45 1_555 B U 55 1_555 0.260 -1.900 3.043 -0.348 0.459 27.363 -4.122 -0.630 3.008 0.970 0.736 27.369 47 BB_G48A49:U59C60_BB B 48 ? B 60 ? B 49 ? B 59 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 'BROMIDE ION' BR 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1Y26 _pdbx_initial_refinement_model.details 'PDB id 1Y26' #