data_3IWF # _entry.id 3IWF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3IWF RCSB RCSB054949 WWPDB D_1000054949 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC86334.3 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3IWF _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-09-02 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Stein, A.J.' 1 'Sather, A.' 2 'Borovilos, M.' 3 'Bargassa, M.' 4 'Joachimiak, A.' 5 'Midwest Center for Structural Genomics (MCSG)' 6 # _citation.id primary _citation.title 'The Crystal Structure of the N-terminal domain of a RpiR Transcriptional Regulator from Staphylococcus epidermidis to 1.4A' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Stein, A.J.' 1 primary 'Sather, A.' 2 primary 'Borovilos, M.' 3 primary 'Bargassa, M.' 4 primary 'Joachimiak, A.' 5 # _cell.entry_id 3IWF _cell.length_a 48.921 _cell.length_b 54.028 _cell.length_c 173.044 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 16 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.Int_Tables_number 20 _symmetry.entry_id 3IWF _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Transcription regulator RpiR family' 12429.998 2 ? ? ? ? 2 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ? ? ? 3 non-polymer syn 'NICKEL (II) ION' 58.693 2 ? ? ? ? 4 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 5 non-polymer syn 2-METHOXYETHANOL 76.094 2 ? ? ? ? 6 non-polymer syn 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 122.143 2 ? ? ? ? 7 water nat water 18.015 168 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)PNILYKIDNQYPYFTKNEKKIAQFILNYPHKVVN(MSE)TSQEIANQLETSSTSIIRLSKKVTPGGFNELKTRLS KFLPKEVTQYNVELVDNESTISLKNKLHSRSKAAL ; _entity_poly.pdbx_seq_one_letter_code_can ;MPNILYKIDNQYPYFTKNEKKIAQFILNYPHKVVNMTSQEIANQLETSSTSIIRLSKKVTPGGFNELKTRLSKFLPKEVT QYNVELVDNESTISLKNKLHSRSKAAL ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier APC86334.3 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 PRO n 1 3 ASN n 1 4 ILE n 1 5 LEU n 1 6 TYR n 1 7 LYS n 1 8 ILE n 1 9 ASP n 1 10 ASN n 1 11 GLN n 1 12 TYR n 1 13 PRO n 1 14 TYR n 1 15 PHE n 1 16 THR n 1 17 LYS n 1 18 ASN n 1 19 GLU n 1 20 LYS n 1 21 LYS n 1 22 ILE n 1 23 ALA n 1 24 GLN n 1 25 PHE n 1 26 ILE n 1 27 LEU n 1 28 ASN n 1 29 TYR n 1 30 PRO n 1 31 HIS n 1 32 LYS n 1 33 VAL n 1 34 VAL n 1 35 ASN n 1 36 MSE n 1 37 THR n 1 38 SER n 1 39 GLN n 1 40 GLU n 1 41 ILE n 1 42 ALA n 1 43 ASN n 1 44 GLN n 1 45 LEU n 1 46 GLU n 1 47 THR n 1 48 SER n 1 49 SER n 1 50 THR n 1 51 SER n 1 52 ILE n 1 53 ILE n 1 54 ARG n 1 55 LEU n 1 56 SER n 1 57 LYS n 1 58 LYS n 1 59 VAL n 1 60 THR n 1 61 PRO n 1 62 GLY n 1 63 GLY n 1 64 PHE n 1 65 ASN n 1 66 GLU n 1 67 LEU n 1 68 LYS n 1 69 THR n 1 70 ARG n 1 71 LEU n 1 72 SER n 1 73 LYS n 1 74 PHE n 1 75 LEU n 1 76 PRO n 1 77 LYS n 1 78 GLU n 1 79 VAL n 1 80 THR n 1 81 GLN n 1 82 TYR n 1 83 ASN n 1 84 VAL n 1 85 GLU n 1 86 LEU n 1 87 VAL n 1 88 ASP n 1 89 ASN n 1 90 GLU n 1 91 SER n 1 92 THR n 1 93 ILE n 1 94 SER n 1 95 LEU n 1 96 LYS n 1 97 ASN n 1 98 LYS n 1 99 LEU n 1 100 HIS n 1 101 SER n 1 102 ARG n 1 103 SER n 1 104 LYS n 1 105 ALA n 1 106 ALA n 1 107 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'SE1891, SE_1891' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 12228' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Staphylococcus epidermidis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 176280 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG7 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8CNB1_STAES _struct_ref.pdbx_db_accession Q8CNB1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MPNILYKIDNQYPYFTKNEKKIAQFILNYPHKVVNMTSQEIANQLETSSTSIIRLSKKVTPGGFNELKTRLSKFLPKEVT QYNVELVDNESTISLKNKLHSRSKAAL ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3IWF A 1 ? 107 ? Q8CNB1 1 ? 107 ? 1 107 2 1 3IWF B 1 ? 107 ? Q8CNB1 1 ? 107 ? 1 107 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 MXE non-polymer . 2-METHOXYETHANOL ? 'C3 H8 O2' 76.094 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 NI non-polymer . 'NICKEL (II) ION' ? 'Ni 2' 58.693 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRS non-polymer . 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 'TRIS BUFFER' 'C4 H12 N O3 1' 122.143 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3IWF _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 47.03 _exptl_crystal.density_Matthews 2.32 _exptl_crystal.density_meas ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '20% PEG MME 2000, 0.1M Tris pH 8.5, 0.01M Nickel chloride, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2009-07-14 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Double crystal' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9794 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_wavelength_list 0.9794 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID # _reflns.entry_id 3IWF _reflns.d_resolution_high 1.400 _reflns.d_resolution_low 50.000 _reflns.number_obs 45328 _reflns.pdbx_Rmerge_I_obs 0.071 _reflns.pdbx_netI_over_sigmaI 11.100 _reflns.pdbx_chi_squared 2.563 _reflns.pdbx_redundancy 4.400 _reflns.percent_possible_obs 99.300 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.40 1.45 ? ? ? 0.617 ? ? 1.020 4.40 ? 4494 99.70 1 1 1.45 1.51 ? ? ? 0.444 ? ? 1.036 4.40 ? 4469 99.80 2 1 1.51 1.58 ? ? ? 0.302 ? ? 1.061 4.40 ? 4524 99.90 3 1 1.58 1.66 ? ? ? 0.211 ? ? 1.131 4.40 ? 4516 100.00 4 1 1.66 1.76 ? ? ? 0.152 ? ? 1.324 4.40 ? 4490 99.90 5 1 1.76 1.90 ? ? ? 0.116 ? ? 1.631 4.40 ? 4532 100.00 6 1 1.90 2.09 ? ? ? 0.082 ? ? 2.274 4.40 ? 4547 99.80 7 1 2.09 2.39 ? ? ? 0.073 ? ? 3.487 4.40 ? 4569 99.90 8 1 2.39 3.02 ? ? ? 0.067 ? ? 5.300 4.30 ? 4643 99.80 9 1 3.02 50.00 ? ? ? 0.054 ? ? 7.505 4.20 ? 4544 94.70 10 1 # _refine.entry_id 3IWF _refine.ls_d_res_high 1.400 _refine.ls_d_res_low 30.700 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.250 _refine.ls_number_reflns_obs 45279 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY ; _refine.ls_R_factor_obs 0.179 _refine.ls_R_factor_R_work 0.177 _refine.ls_wR_factor_R_work 0.180 _refine.ls_R_factor_R_free 0.205 _refine.ls_wR_factor_R_free 0.207 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 2287 _refine.B_iso_mean 21.065 _refine.aniso_B[1][1] 0.000 _refine.aniso_B[2][2] 0.050 _refine.aniso_B[3][3] -0.050 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.962 _refine.correlation_coeff_Fo_to_Fc_free 0.951 _refine.pdbx_overall_ESU_R 0.063 _refine.pdbx_overall_ESU_R_Free 0.058 _refine.overall_SU_ML 0.033 _refine.overall_SU_B 1.842 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1448 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 31 _refine_hist.number_atoms_solvent 168 _refine_hist.number_atoms_total 1647 _refine_hist.d_res_high 1.400 _refine_hist.d_res_low 30.700 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1581 0.011 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2148 1.295 1.980 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 197 4.364 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 66 41.715 24.848 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 292 13.109 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 5 18.183 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 248 0.083 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1149 0.006 0.021 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 949 1.330 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1568 2.213 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 632 3.273 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 573 5.034 4.500 ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 1581 1.429 3.000 ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_low _refine_ls_shell.d_res_high _refine_ls_shell.number_reflns_all _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free _refine_ls_shell.number_reflns_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.R_factor_all _refine_ls_shell.pdbx_refine_id 20 1.436 1.400 3298 98.120 3074 0.300 162 0.349 . . . . . 'X-RAY DIFFRACTION' 20 1.476 1.436 3236 99.815 3068 0.256 162 0.286 . . . . . 'X-RAY DIFFRACTION' 20 1.518 1.476 3178 99.811 3032 0.201 140 0.230 . . . . . 'X-RAY DIFFRACTION' 20 1.565 1.518 3052 99.967 2893 0.190 158 0.226 . . . . . 'X-RAY DIFFRACTION' 20 1.616 1.565 2950 99.966 2790 0.168 159 0.211 . . . . . 'X-RAY DIFFRACTION' 20 1.673 1.616 2919 99.966 2767 0.155 151 0.185 . . . . . 'X-RAY DIFFRACTION' 20 1.736 1.673 2821 99.929 2680 0.141 139 0.189 . . . . . 'X-RAY DIFFRACTION' 20 1.806 1.736 2662 99.850 2510 0.155 148 0.192 . . . . . 'X-RAY DIFFRACTION' 20 1.886 1.806 2548 100.000 2430 0.134 118 0.185 . . . . . 'X-RAY DIFFRACTION' 20 1.978 1.886 2471 99.879 2351 0.144 117 0.160 . . . . . 'X-RAY DIFFRACTION' 20 2.085 1.978 2355 99.788 2236 0.160 114 0.195 . . . . . 'X-RAY DIFFRACTION' 20 2.210 2.085 2226 99.955 2106 0.157 119 0.190 . . . . . 'X-RAY DIFFRACTION' 20 2.362 2.210 2117 99.811 2012 0.164 101 0.177 . . . . . 'X-RAY DIFFRACTION' 20 2.550 2.362 1960 99.847 1860 0.163 97 0.232 . . . . . 'X-RAY DIFFRACTION' 20 2.792 2.550 1843 99.837 1745 0.180 95 0.191 . . . . . 'X-RAY DIFFRACTION' 20 3.118 2.792 1631 99.693 1527 0.185 99 0.207 . . . . . 'X-RAY DIFFRACTION' 20 3.594 3.118 1484 99.730 1406 0.190 74 0.211 . . . . . 'X-RAY DIFFRACTION' 20 4.387 3.594 1251 98.161 1158 0.171 70 0.171 . . . . . 'X-RAY DIFFRACTION' 20 6.142 4.387 1016 94.882 919 0.208 45 0.187 . . . . . 'X-RAY DIFFRACTION' 20 30.701 6.142 604 74.007 428 0.248 19 0.439 . . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 3IWF _struct.title 'The Crystal Structure of the N-terminal domain of a RpiR Transcriptional Regulator from Staphylococcus epidermidis to 1.4A' _struct.pdbx_descriptor 'Transcription regulator RpiR family' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3IWF _struct_keywords.pdbx_keywords 'transcription regulator' _struct_keywords.text ;RpiR, transcriptional, regulator, N-terminal, staphylococcus, epidermidis, PSI, MCSG, Structural Genomics, Midwest Center for Structural Genomics, Protein Structure Initiative, transcription regulator ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 5 ? H N N 6 ? I N N 6 ? J N N 2 ? K N N 3 ? L N N 7 ? M N N 7 ? # _struct_biol.id 1 _struct_biol.details 'authors state that biological unit is the same as asymmetric unit' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 3 ? TYR A 12 ? ASN A 3 TYR A 12 1 ? 10 HELX_P HELX_P2 2 PRO A 13 ? PHE A 15 ? PRO A 13 PHE A 15 5 ? 3 HELX_P HELX_P3 3 THR A 16 ? TYR A 29 ? THR A 16 TYR A 29 1 ? 14 HELX_P HELX_P4 4 TYR A 29 ? VAL A 34 ? TYR A 29 VAL A 34 1 ? 6 HELX_P HELX_P5 5 THR A 37 ? GLU A 46 ? THR A 37 GLU A 46 1 ? 10 HELX_P HELX_P6 6 SER A 48 ? THR A 60 ? SER A 48 THR A 60 1 ? 13 HELX_P HELX_P7 7 GLY A 62 ? LYS A 73 ? GLY A 62 LYS A 73 1 ? 12 HELX_P HELX_P8 8 ASN B 3 ? TYR B 12 ? ASN B 3 TYR B 12 1 ? 10 HELX_P HELX_P9 9 PRO B 13 ? PHE B 15 ? PRO B 13 PHE B 15 5 ? 3 HELX_P HELX_P10 10 THR B 16 ? TYR B 29 ? THR B 16 TYR B 29 1 ? 14 HELX_P HELX_P11 11 TYR B 29 ? ASN B 35 ? TYR B 29 ASN B 35 1 ? 7 HELX_P HELX_P12 12 THR B 37 ? GLU B 46 ? THR B 37 GLU B 46 1 ? 10 HELX_P HELX_P13 13 SER B 48 ? THR B 60 ? SER B 48 THR B 60 1 ? 13 HELX_P HELX_P14 14 GLY B 62 ? LYS B 73 ? GLY B 62 LYS B 73 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A MSE 1 C ? ? ? 1_555 A PRO 2 N ? ? A MSE 1 A PRO 2 1_555 ? ? ? ? ? ? ? 1.348 ? covale2 covale ? ? A ASN 35 C ? ? ? 1_555 A MSE 36 N ? ? A ASN 35 A MSE 36 1_555 ? ? ? ? ? ? ? 1.332 ? covale3 covale ? ? A MSE 36 C ? ? ? 1_555 A THR 37 N ? ? A MSE 36 A THR 37 1_555 ? ? ? ? ? ? ? 1.322 ? covale4 covale ? ? B MSE 1 C ? ? ? 1_555 B PRO 2 N ? ? B MSE 1 B PRO 2 1_555 ? ? ? ? ? ? ? 1.345 ? covale5 covale ? ? B ASN 35 C ? ? ? 1_555 B MSE 36 N ? ? B ASN 35 B MSE 36 1_555 ? ? ? ? ? ? ? 1.326 ? covale6 covale ? ? B MSE 36 C ? ? ? 1_555 B THR 37 N ? ? B MSE 36 B THR 37 1_555 ? ? ? ? ? ? ? 1.334 ? metalc1 metalc ? ? A HIS 31 NE2 ? ? ? 1_555 D NI . NI ? ? A HIS 31 A NI 109 1_555 ? ? ? ? ? ? ? 2.058 ? metalc2 metalc ? ? A HIS 100 NE2 ? ? ? 1_555 D NI . NI ? ? A HIS 100 A NI 109 1_555 ? ? ? ? ? ? ? 2.063 ? metalc3 metalc ? ? B HIS 31 NE2 ? ? ? 1_555 K NI . NI ? ? B HIS 31 B NI 111 1_555 ? ? ? ? ? ? ? 2.046 ? metalc4 metalc ? ? B HIS 100 NE2 ? ? ? 1_555 K NI . NI ? ? B HIS 100 B NI 111 1_555 ? ? ? ? ? ? ? 2.068 ? metalc5 metalc ? ? D NI . NI ? ? ? 1_555 I TRS . O1 ? ? A NI 109 B TRS 109 1_555 ? ? ? ? ? ? ? 2.119 ? metalc6 metalc ? ? D NI . NI ? ? ? 1_555 M HOH . O ? ? A NI 109 B HOH 119 1_555 ? ? ? ? ? ? ? 2.110 ? metalc7 metalc ? ? D NI . NI ? ? ? 1_555 I TRS . N ? ? A NI 109 B TRS 109 1_555 ? ? ? ? ? ? ? 2.055 ? metalc8 metalc ? ? D NI . NI ? ? ? 1_555 I TRS . O2 ? ? A NI 109 B TRS 109 1_555 ? ? ? ? ? ? ? 2.159 ? metalc9 metalc ? ? H TRS . N ? ? ? 1_555 K NI . NI ? ? B TRS 108 B NI 111 1_555 ? ? ? ? ? ? ? 2.097 ? metalc10 metalc ? ? H TRS . O1 ? ? ? 1_555 K NI . NI ? ? B TRS 108 B NI 111 1_555 ? ? ? ? ? ? ? 2.160 ? metalc11 metalc ? ? H TRS . O3 ? ? ? 1_555 K NI . NI ? ? B TRS 108 B NI 111 1_555 ? ? ? ? ? ? ? 2.133 ? metalc12 metalc ? ? K NI . NI ? ? ? 1_555 M HOH . O ? ? B NI 111 B HOH 130 1_555 ? ? ? ? ? ? ? 2.153 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE CL A 108' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE NI A 109' AC3 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE NA A 110' AC4 Software ? ? ? ? 9 'BINDING SITE FOR RESIDUE MXE A 111' AC5 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE MXE A 112' AC6 Software ? ? ? ? 10 'BINDING SITE FOR RESIDUE TRS B 108' AC7 Software ? ? ? ? 10 'BINDING SITE FOR RESIDUE TRS B 109' AC8 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE CL B 110' AC9 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE NI B 111' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 TYR A 6 ? TYR A 6 . ? 1_555 ? 2 AC1 3 ASN A 10 ? ASN A 10 . ? 1_555 ? 3 AC1 3 HIS B 31 ? HIS B 31 . ? 5_455 ? 4 AC2 4 HIS A 31 ? HIS A 31 . ? 1_555 ? 5 AC2 4 HIS A 100 ? HIS A 100 . ? 1_555 ? 6 AC2 4 TRS I . ? TRS B 109 . ? 1_555 ? 7 AC2 4 HOH M . ? HOH B 119 . ? 1_555 ? 8 AC3 2 GLN A 24 ? GLN A 24 . ? 1_555 ? 9 AC3 2 ASN A 28 ? ASN A 28 . ? 1_555 ? 10 AC4 9 GLN A 39 ? GLN A 39 . ? 1_555 ? 11 AC4 9 ALA A 42 ? ALA A 42 . ? 1_555 ? 12 AC4 9 ASN A 43 ? ASN A 43 . ? 1_555 ? 13 AC4 9 THR A 47 ? THR A 47 . ? 1_555 ? 14 AC4 9 SER A 48 ? SER A 48 . ? 3_555 ? 15 AC4 9 SER A 49 ? SER A 49 . ? 3_555 ? 16 AC4 9 SER A 49 ? SER A 49 . ? 1_555 ? 17 AC4 9 HOH L . ? HOH A 161 . ? 1_555 ? 18 AC4 9 HOH L . ? HOH A 161 . ? 3_555 ? 19 AC5 6 GLY A 62 ? GLY A 62 . ? 1_555 ? 20 AC5 6 ASN A 65 ? ASN A 65 . ? 1_555 ? 21 AC5 6 GLU A 66 ? GLU A 66 . ? 1_555 ? 22 AC5 6 HOH L . ? HOH A 140 . ? 1_555 ? 23 AC5 6 LYS B 98 ? LYS B 98 . ? 1_455 ? 24 AC5 6 LEU B 99 ? LEU B 99 . ? 1_455 ? 25 AC6 10 ASP A 9 ? ASP A 9 . ? 5_545 ? 26 AC6 10 ASN A 28 ? ASN A 28 . ? 5_545 ? 27 AC6 10 TYR B 14 ? TYR B 14 . ? 5_545 ? 28 AC6 10 HIS B 31 ? HIS B 31 . ? 1_555 ? 29 AC6 10 PRO B 76 ? PRO B 76 . ? 1_555 ? 30 AC6 10 GLU B 78 ? GLU B 78 . ? 1_555 ? 31 AC6 10 HIS B 100 ? HIS B 100 . ? 1_555 ? 32 AC6 10 NI K . ? NI B 111 . ? 1_555 ? 33 AC6 10 HOH M . ? HOH B 130 . ? 1_555 ? 34 AC6 10 HOH M . ? HOH B 137 . ? 1_555 ? 35 AC7 10 TYR A 14 ? TYR A 14 . ? 5_545 ? 36 AC7 10 HIS A 31 ? HIS A 31 . ? 1_555 ? 37 AC7 10 PRO A 76 ? PRO A 76 . ? 1_555 ? 38 AC7 10 GLU A 78 ? GLU A 78 . ? 1_555 ? 39 AC7 10 HIS A 100 ? HIS A 100 . ? 1_555 ? 40 AC7 10 NI D . ? NI A 109 . ? 1_555 ? 41 AC7 10 HOH L . ? HOH A 121 . ? 1_555 ? 42 AC7 10 ASP B 9 ? ASP B 9 . ? 1_555 ? 43 AC7 10 ASN B 28 ? ASN B 28 . ? 1_555 ? 44 AC7 10 HOH M . ? HOH B 119 . ? 1_555 ? 45 AC8 3 HIS A 31 ? HIS A 31 . ? 1_555 ? 46 AC8 3 TYR B 6 ? TYR B 6 . ? 1_555 ? 47 AC8 3 ASN B 10 ? ASN B 10 . ? 1_555 ? 48 AC9 4 HIS B 31 ? HIS B 31 . ? 1_555 ? 49 AC9 4 HIS B 100 ? HIS B 100 . ? 1_555 ? 50 AC9 4 TRS H . ? TRS B 108 . ? 1_555 ? 51 AC9 4 HOH M . ? HOH B 130 . ? 1_555 ? # _atom_sites.entry_id 3IWF _atom_sites.fract_transf_matrix[1][1] 0.020441 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018509 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005779 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL N NA NI O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 1 MSE MSE A . n A 1 2 PRO 2 2 2 PRO PRO A . n A 1 3 ASN 3 3 3 ASN ASN A . n A 1 4 ILE 4 4 4 ILE ILE A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 TYR 6 6 6 TYR TYR A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 ILE 8 8 8 ILE ILE A . n A 1 9 ASP 9 9 9 ASP ASP A . n A 1 10 ASN 10 10 10 ASN ASN A . n A 1 11 GLN 11 11 11 GLN GLN A . n A 1 12 TYR 12 12 12 TYR TYR A . n A 1 13 PRO 13 13 13 PRO PRO A . n A 1 14 TYR 14 14 14 TYR TYR A . n A 1 15 PHE 15 15 15 PHE PHE A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 LYS 17 17 17 LYS LYS A . n A 1 18 ASN 18 18 18 ASN ASN A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 LYS 21 21 21 LYS LYS A . n A 1 22 ILE 22 22 22 ILE ILE A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 GLN 24 24 24 GLN GLN A . n A 1 25 PHE 25 25 25 PHE PHE A . n A 1 26 ILE 26 26 26 ILE ILE A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 ASN 28 28 28 ASN ASN A . n A 1 29 TYR 29 29 29 TYR TYR A . n A 1 30 PRO 30 30 30 PRO PRO A . n A 1 31 HIS 31 31 31 HIS HIS A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 VAL 34 34 34 VAL VAL A . n A 1 35 ASN 35 35 35 ASN ASN A . n A 1 36 MSE 36 36 36 MSE MSE A . n A 1 37 THR 37 37 37 THR THR A . n A 1 38 SER 38 38 38 SER SER A . n A 1 39 GLN 39 39 39 GLN GLN A . n A 1 40 GLU 40 40 40 GLU GLU A . n A 1 41 ILE 41 41 41 ILE ILE A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 ASN 43 43 43 ASN ASN A . n A 1 44 GLN 44 44 44 GLN GLN A . n A 1 45 LEU 45 45 45 LEU LEU A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 SER 48 48 48 SER SER A . n A 1 49 SER 49 49 49 SER SER A . n A 1 50 THR 50 50 50 THR THR A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 ILE 52 52 52 ILE ILE A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 ARG 54 54 54 ARG ARG A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 SER 56 56 56 SER SER A . n A 1 57 LYS 57 57 57 LYS LYS A . n A 1 58 LYS 58 58 58 LYS LYS A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 THR 60 60 60 THR THR A . n A 1 61 PRO 61 61 61 PRO PRO A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 PHE 64 64 64 PHE PHE A . n A 1 65 ASN 65 65 65 ASN ASN A . n A 1 66 GLU 66 66 66 GLU GLU A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 LYS 68 68 68 LYS LYS A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 ARG 70 70 70 ARG ARG A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 SER 72 72 72 SER SER A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 PHE 74 74 74 PHE PHE A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 PRO 76 76 76 PRO PRO A . n A 1 77 LYS 77 77 77 LYS LYS A . n A 1 78 GLU 78 78 78 GLU GLU A . n A 1 79 VAL 79 79 79 VAL VAL A . n A 1 80 THR 80 80 80 THR THR A . n A 1 81 GLN 81 81 81 GLN GLN A . n A 1 82 TYR 82 82 82 TYR TYR A . n A 1 83 ASN 83 83 83 ASN ASN A . n A 1 84 VAL 84 84 ? ? ? A . n A 1 85 GLU 85 85 ? ? ? A . n A 1 86 LEU 86 86 ? ? ? A . n A 1 87 VAL 87 87 ? ? ? A . n A 1 88 ASP 88 88 ? ? ? A . n A 1 89 ASN 89 89 ? ? ? A . n A 1 90 GLU 90 90 ? ? ? A . n A 1 91 SER 91 91 ? ? ? A . n A 1 92 THR 92 92 ? ? ? A . n A 1 93 ILE 93 93 ? ? ? A . n A 1 94 SER 94 94 ? ? ? A . n A 1 95 LEU 95 95 ? ? ? A . n A 1 96 LYS 96 96 ? ? ? A . n A 1 97 ASN 97 97 97 ASN ASN A . n A 1 98 LYS 98 98 98 LYS LYS A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 HIS 100 100 100 HIS HIS A . n A 1 101 SER 101 101 101 SER SER A . n A 1 102 ARG 102 102 102 ARG ARG A . n A 1 103 SER 103 103 ? ? ? A . n A 1 104 LYS 104 104 ? ? ? A . n A 1 105 ALA 105 105 ? ? ? A . n A 1 106 ALA 106 106 ? ? ? A . n A 1 107 LEU 107 107 ? ? ? A . n B 1 1 MSE 1 1 1 MSE MSE B . n B 1 2 PRO 2 2 2 PRO PRO B . n B 1 3 ASN 3 3 3 ASN ASN B . n B 1 4 ILE 4 4 4 ILE ILE B . n B 1 5 LEU 5 5 5 LEU LEU B . n B 1 6 TYR 6 6 6 TYR TYR B . n B 1 7 LYS 7 7 7 LYS LYS B . n B 1 8 ILE 8 8 8 ILE ILE B . n B 1 9 ASP 9 9 9 ASP ASP B . n B 1 10 ASN 10 10 10 ASN ASN B . n B 1 11 GLN 11 11 11 GLN GLN B . n B 1 12 TYR 12 12 12 TYR TYR B . n B 1 13 PRO 13 13 13 PRO PRO B . n B 1 14 TYR 14 14 14 TYR TYR B . n B 1 15 PHE 15 15 15 PHE PHE B . n B 1 16 THR 16 16 16 THR THR B . n B 1 17 LYS 17 17 17 LYS LYS B . n B 1 18 ASN 18 18 18 ASN ASN B . n B 1 19 GLU 19 19 19 GLU GLU B . n B 1 20 LYS 20 20 20 LYS LYS B . n B 1 21 LYS 21 21 21 LYS LYS B . n B 1 22 ILE 22 22 22 ILE ILE B . n B 1 23 ALA 23 23 23 ALA ALA B . n B 1 24 GLN 24 24 24 GLN GLN B . n B 1 25 PHE 25 25 25 PHE PHE B . n B 1 26 ILE 26 26 26 ILE ILE B . n B 1 27 LEU 27 27 27 LEU LEU B . n B 1 28 ASN 28 28 28 ASN ASN B . n B 1 29 TYR 29 29 29 TYR TYR B . n B 1 30 PRO 30 30 30 PRO PRO B . n B 1 31 HIS 31 31 31 HIS HIS B . n B 1 32 LYS 32 32 32 LYS LYS B . n B 1 33 VAL 33 33 33 VAL VAL B . n B 1 34 VAL 34 34 34 VAL VAL B . n B 1 35 ASN 35 35 35 ASN ASN B . n B 1 36 MSE 36 36 36 MSE MSE B . n B 1 37 THR 37 37 37 THR THR B . n B 1 38 SER 38 38 38 SER SER B . n B 1 39 GLN 39 39 39 GLN GLN B . n B 1 40 GLU 40 40 40 GLU GLU B . n B 1 41 ILE 41 41 41 ILE ILE B . n B 1 42 ALA 42 42 42 ALA ALA B . n B 1 43 ASN 43 43 43 ASN ASN B . n B 1 44 GLN 44 44 44 GLN GLN B . n B 1 45 LEU 45 45 45 LEU LEU B . n B 1 46 GLU 46 46 46 GLU GLU B . n B 1 47 THR 47 47 47 THR THR B . n B 1 48 SER 48 48 48 SER SER B . n B 1 49 SER 49 49 49 SER SER B . n B 1 50 THR 50 50 50 THR THR B . n B 1 51 SER 51 51 51 SER SER B . n B 1 52 ILE 52 52 52 ILE ILE B . n B 1 53 ILE 53 53 53 ILE ILE B . n B 1 54 ARG 54 54 54 ARG ARG B . n B 1 55 LEU 55 55 55 LEU LEU B . n B 1 56 SER 56 56 56 SER SER B . n B 1 57 LYS 57 57 57 LYS LYS B . n B 1 58 LYS 58 58 58 LYS LYS B . n B 1 59 VAL 59 59 59 VAL VAL B . n B 1 60 THR 60 60 60 THR THR B . n B 1 61 PRO 61 61 61 PRO PRO B . n B 1 62 GLY 62 62 62 GLY GLY B . n B 1 63 GLY 63 63 63 GLY GLY B . n B 1 64 PHE 64 64 64 PHE PHE B . n B 1 65 ASN 65 65 65 ASN ASN B . n B 1 66 GLU 66 66 66 GLU GLU B . n B 1 67 LEU 67 67 67 LEU LEU B . n B 1 68 LYS 68 68 68 LYS LYS B . n B 1 69 THR 69 69 69 THR THR B . n B 1 70 ARG 70 70 70 ARG ARG B . n B 1 71 LEU 71 71 71 LEU LEU B . n B 1 72 SER 72 72 72 SER SER B . n B 1 73 LYS 73 73 73 LYS LYS B . n B 1 74 PHE 74 74 74 PHE PHE B . n B 1 75 LEU 75 75 75 LEU LEU B . n B 1 76 PRO 76 76 76 PRO PRO B . n B 1 77 LYS 77 77 77 LYS LYS B . n B 1 78 GLU 78 78 78 GLU GLU B . n B 1 79 VAL 79 79 79 VAL VAL B . n B 1 80 THR 80 80 80 THR THR B . n B 1 81 GLN 81 81 81 GLN GLN B . n B 1 82 TYR 82 82 82 TYR TYR B . n B 1 83 ASN 83 83 83 ASN ASN B . n B 1 84 VAL 84 84 84 VAL VAL B . n B 1 85 GLU 85 85 ? ? ? B . n B 1 86 LEU 86 86 ? ? ? B . n B 1 87 VAL 87 87 ? ? ? B . n B 1 88 ASP 88 88 ? ? ? B . n B 1 89 ASN 89 89 ? ? ? B . n B 1 90 GLU 90 90 ? ? ? B . n B 1 91 SER 91 91 ? ? ? B . n B 1 92 THR 92 92 ? ? ? B . n B 1 93 ILE 93 93 ? ? ? B . n B 1 94 SER 94 94 ? ? ? B . n B 1 95 LEU 95 95 ? ? ? B . n B 1 96 LYS 96 96 ? ? ? B . n B 1 97 ASN 97 97 97 ASN ASN B . n B 1 98 LYS 98 98 98 LYS LYS B . n B 1 99 LEU 99 99 99 LEU LEU B . n B 1 100 HIS 100 100 100 HIS HIS B . n B 1 101 SER 101 101 101 SER SER B . n B 1 102 ARG 102 102 102 ARG ARG B . n B 1 103 SER 103 103 ? ? ? B . n B 1 104 LYS 104 104 ? ? ? B . n B 1 105 ALA 105 105 ? ? ? B . n B 1 106 ALA 106 106 ? ? ? B . n B 1 107 LEU 107 107 ? ? ? B . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL 1 108 2 CL CL A . D 3 NI 1 109 4 NI NI A . E 4 NA 1 110 5 NA NA A . F 5 MXE 1 111 1 MXE MXE A . G 5 MXE 1 112 2 MXE MXE A . H 6 TRS 1 108 1 TRS TRS B . I 6 TRS 1 109 2 TRS TRS B . J 2 CL 1 110 1 CL CL B . K 3 NI 1 111 3 NI NI B . L 7 HOH 1 113 2 HOH HOH A . L 7 HOH 2 114 6 HOH HOH A . L 7 HOH 3 115 115 HOH HOH A . L 7 HOH 4 116 7 HOH HOH A . L 7 HOH 5 117 117 HOH HOH A . L 7 HOH 6 118 118 HOH HOH A . L 7 HOH 7 119 8 HOH HOH A . L 7 HOH 8 120 11 HOH HOH A . L 7 HOH 9 121 13 HOH HOH A . L 7 HOH 10 122 14 HOH HOH A . L 7 HOH 11 123 123 HOH HOH A . L 7 HOH 12 124 21 HOH HOH A . L 7 HOH 13 125 26 HOH HOH A . L 7 HOH 14 126 126 HOH HOH A . L 7 HOH 15 127 27 HOH HOH A . L 7 HOH 16 128 30 HOH HOH A . L 7 HOH 17 129 32 HOH HOH A . L 7 HOH 18 130 34 HOH HOH A . L 7 HOH 19 131 131 HOH HOH A . L 7 HOH 20 132 36 HOH HOH A . L 7 HOH 21 133 133 HOH HOH A . L 7 HOH 22 134 37 HOH HOH A . L 7 HOH 23 135 135 HOH HOH A . L 7 HOH 24 136 41 HOH HOH A . L 7 HOH 25 137 137 HOH HOH A . L 7 HOH 26 138 138 HOH HOH A . L 7 HOH 27 139 139 HOH HOH A . L 7 HOH 28 140 140 HOH HOH A . L 7 HOH 29 141 141 HOH HOH A . L 7 HOH 30 142 142 HOH HOH A . L 7 HOH 31 143 143 HOH HOH A . L 7 HOH 32 144 144 HOH HOH A . L 7 HOH 33 145 45 HOH HOH A . L 7 HOH 34 146 146 HOH HOH A . L 7 HOH 35 147 46 HOH HOH A . L 7 HOH 36 148 47 HOH HOH A . L 7 HOH 37 149 49 HOH HOH A . L 7 HOH 38 150 51 HOH HOH A . L 7 HOH 39 151 151 HOH HOH A . L 7 HOH 40 152 152 HOH HOH A . L 7 HOH 41 153 153 HOH HOH A . L 7 HOH 42 154 154 HOH HOH A . L 7 HOH 43 155 52 HOH HOH A . L 7 HOH 44 156 53 HOH HOH A . L 7 HOH 45 157 54 HOH HOH A . L 7 HOH 46 158 55 HOH HOH A . L 7 HOH 47 159 57 HOH HOH A . L 7 HOH 48 160 160 HOH HOH A . L 7 HOH 49 161 161 HOH HOH A . L 7 HOH 50 162 58 HOH HOH A . L 7 HOH 51 163 163 HOH HOH A . L 7 HOH 52 164 164 HOH HOH A . L 7 HOH 53 165 59 HOH HOH A . L 7 HOH 54 166 166 HOH HOH A . L 7 HOH 55 167 60 HOH HOH A . L 7 HOH 56 168 61 HOH HOH A . L 7 HOH 57 169 62 HOH HOH A . L 7 HOH 58 170 64 HOH HOH A . L 7 HOH 59 171 67 HOH HOH A . L 7 HOH 60 172 68 HOH HOH A . L 7 HOH 61 173 70 HOH HOH A . L 7 HOH 62 174 73 HOH HOH A . L 7 HOH 63 175 75 HOH HOH A . L 7 HOH 64 176 83 HOH HOH A . L 7 HOH 65 177 84 HOH HOH A . L 7 HOH 66 178 85 HOH HOH A . L 7 HOH 67 179 86 HOH HOH A . L 7 HOH 68 180 87 HOH HOH A . L 7 HOH 69 181 89 HOH HOH A . L 7 HOH 70 182 91 HOH HOH A . L 7 HOH 71 183 93 HOH HOH A . L 7 HOH 72 184 94 HOH HOH A . L 7 HOH 73 185 97 HOH HOH A . L 7 HOH 74 186 100 HOH HOH A . L 7 HOH 75 187 101 HOH HOH A . L 7 HOH 76 188 107 HOH HOH A . L 7 HOH 77 189 108 HOH HOH A . L 7 HOH 78 190 110 HOH HOH A . L 7 HOH 79 191 112 HOH HOH A . M 7 HOH 1 112 1 HOH HOH B . M 7 HOH 2 113 113 HOH HOH B . M 7 HOH 3 114 114 HOH HOH B . M 7 HOH 4 115 3 HOH HOH B . M 7 HOH 5 116 116 HOH HOH B . M 7 HOH 6 117 4 HOH HOH B . M 7 HOH 7 118 5 HOH HOH B . M 7 HOH 8 119 119 HOH HOH B . M 7 HOH 9 120 120 HOH HOH B . M 7 HOH 10 121 121 HOH HOH B . M 7 HOH 11 122 122 HOH HOH B . M 7 HOH 12 123 9 HOH HOH B . M 7 HOH 13 124 124 HOH HOH B . M 7 HOH 14 125 125 HOH HOH B . M 7 HOH 15 126 10 HOH HOH B . M 7 HOH 16 127 127 HOH HOH B . M 7 HOH 17 128 128 HOH HOH B . M 7 HOH 18 129 129 HOH HOH B . M 7 HOH 19 130 130 HOH HOH B . M 7 HOH 20 131 12 HOH HOH B . M 7 HOH 21 132 132 HOH HOH B . M 7 HOH 22 133 15 HOH HOH B . M 7 HOH 23 134 134 HOH HOH B . M 7 HOH 24 135 16 HOH HOH B . M 7 HOH 25 136 136 HOH HOH B . M 7 HOH 26 137 17 HOH HOH B . M 7 HOH 27 138 18 HOH HOH B . M 7 HOH 28 139 19 HOH HOH B . M 7 HOH 29 140 20 HOH HOH B . M 7 HOH 30 141 22 HOH HOH B . M 7 HOH 31 142 23 HOH HOH B . M 7 HOH 32 143 24 HOH HOH B . M 7 HOH 33 144 25 HOH HOH B . M 7 HOH 34 145 145 HOH HOH B . M 7 HOH 35 146 28 HOH HOH B . M 7 HOH 36 147 147 HOH HOH B . M 7 HOH 37 148 148 HOH HOH B . M 7 HOH 38 149 149 HOH HOH B . M 7 HOH 39 150 150 HOH HOH B . M 7 HOH 40 151 29 HOH HOH B . M 7 HOH 41 152 31 HOH HOH B . M 7 HOH 42 153 33 HOH HOH B . M 7 HOH 43 154 35 HOH HOH B . M 7 HOH 44 155 155 HOH HOH B . M 7 HOH 45 156 156 HOH HOH B . M 7 HOH 46 157 157 HOH HOH B . M 7 HOH 47 158 158 HOH HOH B . M 7 HOH 48 159 159 HOH HOH B . M 7 HOH 49 160 38 HOH HOH B . M 7 HOH 50 161 39 HOH HOH B . M 7 HOH 51 162 162 HOH HOH B . M 7 HOH 52 163 40 HOH HOH B . M 7 HOH 53 164 42 HOH HOH B . M 7 HOH 54 165 165 HOH HOH B . M 7 HOH 55 166 43 HOH HOH B . M 7 HOH 56 167 167 HOH HOH B . M 7 HOH 57 168 168 HOH HOH B . M 7 HOH 58 169 44 HOH HOH B . M 7 HOH 59 170 48 HOH HOH B . M 7 HOH 60 171 50 HOH HOH B . M 7 HOH 61 172 56 HOH HOH B . M 7 HOH 62 173 63 HOH HOH B . M 7 HOH 63 174 65 HOH HOH B . M 7 HOH 64 175 66 HOH HOH B . M 7 HOH 65 176 69 HOH HOH B . M 7 HOH 66 177 71 HOH HOH B . M 7 HOH 67 178 72 HOH HOH B . M 7 HOH 68 179 74 HOH HOH B . M 7 HOH 69 180 76 HOH HOH B . M 7 HOH 70 181 77 HOH HOH B . M 7 HOH 71 182 78 HOH HOH B . M 7 HOH 72 183 79 HOH HOH B . M 7 HOH 73 184 80 HOH HOH B . M 7 HOH 74 185 81 HOH HOH B . M 7 HOH 75 186 82 HOH HOH B . M 7 HOH 76 187 88 HOH HOH B . M 7 HOH 77 188 90 HOH HOH B . M 7 HOH 78 189 92 HOH HOH B . M 7 HOH 79 190 95 HOH HOH B . M 7 HOH 80 191 96 HOH HOH B . M 7 HOH 81 192 98 HOH HOH B . M 7 HOH 82 193 99 HOH HOH B . M 7 HOH 83 194 102 HOH HOH B . M 7 HOH 84 195 103 HOH HOH B . M 7 HOH 85 196 104 HOH HOH B . M 7 HOH 86 197 105 HOH HOH B . M 7 HOH 87 198 106 HOH HOH B . M 7 HOH 88 199 109 HOH HOH B . M 7 HOH 89 200 111 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 1 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 36 A MSE 36 ? MET SELENOMETHIONINE 3 B MSE 1 B MSE 1 ? MET SELENOMETHIONINE 4 B MSE 36 B MSE 36 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 software_defined_assembly PISA monomeric 1 3 software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H,I,J,K,L,M 2 1 A,C,D,E,F,G,L 3 1 B,H,I,J,K,M # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 163 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id L _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 31 ? A HIS 31 ? 1_555 NI ? D NI . ? A NI 109 ? 1_555 NE2 ? A HIS 100 ? A HIS 100 ? 1_555 91.2 ? 2 NE2 ? A HIS 31 ? A HIS 31 ? 1_555 NI ? D NI . ? A NI 109 ? 1_555 O1 ? I TRS . ? B TRS 109 ? 1_555 92.1 ? 3 NE2 ? A HIS 100 ? A HIS 100 ? 1_555 NI ? D NI . ? A NI 109 ? 1_555 O1 ? I TRS . ? B TRS 109 ? 1_555 92.5 ? 4 NE2 ? A HIS 31 ? A HIS 31 ? 1_555 NI ? D NI . ? A NI 109 ? 1_555 O ? M HOH . ? B HOH 119 ? 1_555 92.8 ? 5 NE2 ? A HIS 100 ? A HIS 100 ? 1_555 NI ? D NI . ? A NI 109 ? 1_555 O ? M HOH . ? B HOH 119 ? 1_555 92.1 ? 6 O1 ? I TRS . ? B TRS 109 ? 1_555 NI ? D NI . ? A NI 109 ? 1_555 O ? M HOH . ? B HOH 119 ? 1_555 173.2 ? 7 NE2 ? A HIS 31 ? A HIS 31 ? 1_555 NI ? D NI . ? A NI 109 ? 1_555 N ? I TRS . ? B TRS 109 ? 1_555 167.7 ? 8 NE2 ? A HIS 100 ? A HIS 100 ? 1_555 NI ? D NI . ? A NI 109 ? 1_555 N ? I TRS . ? B TRS 109 ? 1_555 100.0 ? 9 O1 ? I TRS . ? B TRS 109 ? 1_555 NI ? D NI . ? A NI 109 ? 1_555 N ? I TRS . ? B TRS 109 ? 1_555 82.4 ? 10 O ? M HOH . ? B HOH 119 ? 1_555 NI ? D NI . ? A NI 109 ? 1_555 N ? I TRS . ? B TRS 109 ? 1_555 91.8 ? 11 NE2 ? A HIS 31 ? A HIS 31 ? 1_555 NI ? D NI . ? A NI 109 ? 1_555 O2 ? I TRS . ? B TRS 109 ? 1_555 89.6 ? 12 NE2 ? A HIS 100 ? A HIS 100 ? 1_555 NI ? D NI . ? A NI 109 ? 1_555 O2 ? I TRS . ? B TRS 109 ? 1_555 175.3 ? 13 O1 ? I TRS . ? B TRS 109 ? 1_555 NI ? D NI . ? A NI 109 ? 1_555 O2 ? I TRS . ? B TRS 109 ? 1_555 82.8 ? 14 O ? M HOH . ? B HOH 119 ? 1_555 NI ? D NI . ? A NI 109 ? 1_555 O2 ? I TRS . ? B TRS 109 ? 1_555 92.5 ? 15 N ? I TRS . ? B TRS 109 ? 1_555 NI ? D NI . ? A NI 109 ? 1_555 O2 ? I TRS . ? B TRS 109 ? 1_555 78.8 ? 16 NE2 ? B HIS 31 ? B HIS 31 ? 1_555 NI ? K NI . ? B NI 111 ? 1_555 NE2 ? B HIS 100 ? B HIS 100 ? 1_555 92.8 ? 17 NE2 ? B HIS 31 ? B HIS 31 ? 1_555 NI ? K NI . ? B NI 111 ? 1_555 N ? H TRS . ? B TRS 108 ? 1_555 166.6 ? 18 NE2 ? B HIS 100 ? B HIS 100 ? 1_555 NI ? K NI . ? B NI 111 ? 1_555 N ? H TRS . ? B TRS 108 ? 1_555 99.8 ? 19 NE2 ? B HIS 31 ? B HIS 31 ? 1_555 NI ? K NI . ? B NI 111 ? 1_555 O1 ? H TRS . ? B TRS 108 ? 1_555 90.3 ? 20 NE2 ? B HIS 100 ? B HIS 100 ? 1_555 NI ? K NI . ? B NI 111 ? 1_555 O1 ? H TRS . ? B TRS 108 ? 1_555 174.1 ? 21 N ? H TRS . ? B TRS 108 ? 1_555 NI ? K NI . ? B NI 111 ? 1_555 O1 ? H TRS . ? B TRS 108 ? 1_555 76.8 ? 22 NE2 ? B HIS 31 ? B HIS 31 ? 1_555 NI ? K NI . ? B NI 111 ? 1_555 O3 ? H TRS . ? B TRS 108 ? 1_555 94.4 ? 23 NE2 ? B HIS 100 ? B HIS 100 ? 1_555 NI ? K NI . ? B NI 111 ? 1_555 O3 ? H TRS . ? B TRS 108 ? 1_555 92.6 ? 24 N ? H TRS . ? B TRS 108 ? 1_555 NI ? K NI . ? B NI 111 ? 1_555 O3 ? H TRS . ? B TRS 108 ? 1_555 80.6 ? 25 O1 ? H TRS . ? B TRS 108 ? 1_555 NI ? K NI . ? B NI 111 ? 1_555 O3 ? H TRS . ? B TRS 108 ? 1_555 82.1 ? 26 NE2 ? B HIS 31 ? B HIS 31 ? 1_555 NI ? K NI . ? B NI 111 ? 1_555 O ? M HOH . ? B HOH 130 ? 1_555 90.4 ? 27 NE2 ? B HIS 100 ? B HIS 100 ? 1_555 NI ? K NI . ? B NI 111 ? 1_555 O ? M HOH . ? B HOH 130 ? 1_555 92.6 ? 28 N ? H TRS . ? B TRS 108 ? 1_555 NI ? K NI . ? B NI 111 ? 1_555 O ? M HOH . ? B HOH 130 ? 1_555 93.6 ? 29 O1 ? H TRS . ? B TRS 108 ? 1_555 NI ? K NI . ? B NI 111 ? 1_555 O ? M HOH . ? B HOH 130 ? 1_555 92.5 ? 30 O3 ? H TRS . ? B TRS 108 ? 1_555 NI ? K NI . ? B NI 111 ? 1_555 O ? M HOH . ? B HOH 130 ? 1_555 172.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-09-15 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Source and taxonomy' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 REFMAC refmac_5.5.0102 24/04/2001 program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 3 PDB_EXTRACT 3.004 'September 10, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 4 SBC-Collect . ? ? ? ? 'data collection' ? ? ? 5 HKL-3000 . ? ? ? ? 'data reduction' ? ? ? 6 HKL-3000 . ? ? ? ? 'data scaling' ? ? ? 7 HKL-3000 . ? ? ? ? phasing ? ? ? 8 SHELX . ? ? ? ? phasing ? ? ? 9 MLPHARE . ? ? ? ? phasing ? ? ? 10 DM . ? ? ? ? phasing ? ? ? 11 ARP/wARP . ? ? ? ? 'model building' ? ? ? 12 Coot . ? ? ? ? 'model building' ? ? ? 13 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OH B TYR 82 ? B O B HOH 135 ? ? 1.44 2 1 OH A TYR 82 ? A O A HOH 160 ? ? 1.48 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O1 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 MXE _pdbx_validate_symm_contact.auth_seq_id_1 111 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O1 _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 MXE _pdbx_validate_symm_contact.auth_seq_id_2 111 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 3_555 _pdbx_validate_symm_contact.dist 1.61 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A MSE 1 ? CG ? A MSE 1 CG 2 1 Y 1 A MSE 1 ? SE ? A MSE 1 SE 3 1 Y 1 A MSE 1 ? CE ? A MSE 1 CE 4 1 Y 1 A LYS 73 ? CG ? A LYS 73 CG 5 1 Y 1 A LYS 73 ? CD ? A LYS 73 CD 6 1 Y 1 A LYS 73 ? CE ? A LYS 73 CE 7 1 Y 1 A LYS 73 ? NZ ? A LYS 73 NZ 8 1 Y 1 A GLN 81 ? CG ? A GLN 81 CG 9 1 Y 1 A GLN 81 ? CD ? A GLN 81 CD 10 1 Y 1 A GLN 81 ? OE1 ? A GLN 81 OE1 11 1 Y 1 A GLN 81 ? NE2 ? A GLN 81 NE2 12 1 Y 1 A ARG 102 ? CG ? A ARG 102 CG 13 1 Y 1 A ARG 102 ? CD ? A ARG 102 CD 14 1 Y 1 A ARG 102 ? NE ? A ARG 102 NE 15 1 Y 1 A ARG 102 ? CZ ? A ARG 102 CZ 16 1 Y 1 A ARG 102 ? NH1 ? A ARG 102 NH1 17 1 Y 1 A ARG 102 ? NH2 ? A ARG 102 NH2 18 1 Y 1 B MSE 1 ? CG ? B MSE 1 CG 19 1 Y 1 B MSE 1 ? SE ? B MSE 1 SE 20 1 Y 1 B MSE 1 ? CE ? B MSE 1 CE 21 1 Y 1 B ASN 35 ? CG ? B ASN 35 CG 22 1 Y 1 B ASN 35 ? OD1 ? B ASN 35 OD1 23 1 Y 1 B ASN 35 ? ND2 ? B ASN 35 ND2 24 1 Y 1 B GLN 81 ? CG ? B GLN 81 CG 25 1 Y 1 B GLN 81 ? CD ? B GLN 81 CD 26 1 Y 1 B GLN 81 ? OE1 ? B GLN 81 OE1 27 1 Y 1 B GLN 81 ? NE2 ? B GLN 81 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A VAL 84 ? A VAL 84 2 1 Y 1 A GLU 85 ? A GLU 85 3 1 Y 1 A LEU 86 ? A LEU 86 4 1 Y 1 A VAL 87 ? A VAL 87 5 1 Y 1 A ASP 88 ? A ASP 88 6 1 Y 1 A ASN 89 ? A ASN 89 7 1 Y 1 A GLU 90 ? A GLU 90 8 1 Y 1 A SER 91 ? A SER 91 9 1 Y 1 A THR 92 ? A THR 92 10 1 Y 1 A ILE 93 ? A ILE 93 11 1 Y 1 A SER 94 ? A SER 94 12 1 Y 1 A LEU 95 ? A LEU 95 13 1 Y 1 A LYS 96 ? A LYS 96 14 1 Y 1 A SER 103 ? A SER 103 15 1 Y 1 A LYS 104 ? A LYS 104 16 1 Y 1 A ALA 105 ? A ALA 105 17 1 Y 1 A ALA 106 ? A ALA 106 18 1 Y 1 A LEU 107 ? A LEU 107 19 1 Y 1 B GLU 85 ? B GLU 85 20 1 Y 1 B LEU 86 ? B LEU 86 21 1 Y 1 B VAL 87 ? B VAL 87 22 1 Y 1 B ASP 88 ? B ASP 88 23 1 Y 1 B ASN 89 ? B ASN 89 24 1 Y 1 B GLU 90 ? B GLU 90 25 1 Y 1 B SER 91 ? B SER 91 26 1 Y 1 B THR 92 ? B THR 92 27 1 Y 1 B ILE 93 ? B ILE 93 28 1 Y 1 B SER 94 ? B SER 94 29 1 Y 1 B LEU 95 ? B LEU 95 30 1 Y 1 B LYS 96 ? B LYS 96 31 1 Y 1 B SER 103 ? B SER 103 32 1 Y 1 B LYS 104 ? B LYS 104 33 1 Y 1 B ALA 105 ? B ALA 105 34 1 Y 1 B ALA 106 ? B ALA 106 35 1 Y 1 B LEU 107 ? B LEU 107 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 'NICKEL (II) ION' NI 4 'SODIUM ION' NA 5 2-METHOXYETHANOL MXE 6 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL TRS 7 water HOH #