HEADER VIRUS 13-AUG-12 3J23 TITLE THE ENTEROVIRUS 71 EMPTY CAPSID COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN VP1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 638-862; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: CAPSID PROTEIN VP0; COMPND 7 CHAIN: B; COMPND 8 FRAGMENT: UNP RESIDUES 82-318; COMPND 9 SYNONYM: CAPSID PROTEIN VP2; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: CAPSID PROTEIN VP3; COMPND 12 CHAIN: C; COMPND 13 FRAGMENT: UNP RESIDUES 324-562 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN ENTEROVIRUS 71; SOURCE 3 ORGANISM_COMMON: EV71; SOURCE 4 ORGANISM_TAXID: 39054; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: HUMAN ENTEROVIRUS 71; SOURCE 7 ORGANISM_COMMON: EV71; SOURCE 8 ORGANISM_TAXID: 39054; SOURCE 9 MOL_ID: 3; SOURCE 10 ORGANISM_SCIENTIFIC: HUMAN ENTEROVIRUS 71; SOURCE 11 ORGANISM_COMMON: EV71; SOURCE 12 ORGANISM_TAXID: 39054 KEYWDS EV71, 80S, VIRUS EXPDTA ELECTRON MICROSCOPY AUTHOR K.L.SHINGLER REVDAT 5 21-FEB-24 3J23 1 REMARK REVDAT 4 18-JUL-18 3J23 1 REMARK REVDAT 3 17-APR-13 3J23 1 JRNL REVDAT 2 10-APR-13 3J23 1 SCALE1 SCALE2 SCALE3 REVDAT 1 03-APR-13 3J23 0 JRNL AUTH K.L.SHINGLER,J.L.YODER,M.S.CARNEGIE,R.E.ASHLEY,A.M.MAKHOV, JRNL AUTH 2 J.F.CONWAY,S.HAFENSTEIN JRNL TITL THE ENTEROVIRUS 71 A-PARTICLE FORMS A GATEWAY TO ALLOW JRNL TITL 2 GENOME RELEASE: A CRYOEM STUDY OF PICORNAVIRUS UNCOATING. JRNL REF PLOS PATHOG. V. 9 03240 2013 JRNL REFN ISSN 1553-7366 JRNL PMID 23555253 JRNL DOI 10.1371/JOURNAL.PPAT.1003240 REMARK 2 REMARK 2 RESOLUTION. 9.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : SITUS, UCSF CHIMERA, AUTO3DEM, EMAN REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 3VBU REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : RIGID BODY FIT REMARK 3 REFINEMENT TARGET : CORRELATION COEFFICIENT REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : REFINEMENT PROTOCOL--RIGID BODY DETAILS--THE REMARK 3 PROTOMER WAS FIT IN CHIMERA, USED TO GENERATE A FULL CRYSTAL MAP, REMARK 3 THEN DOCKED AS A RIGID BODY IN SITUS. REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : 1.270 REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 9.200 REMARK 3 NUMBER OF PARTICLES : 1931 REMARK 3 CTF CORRECTION METHOD : NULL REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: A SINGLE DATA SET WAS USED FOR THE RECONSTRUCTION. REMARK 3 PARTICLES WERE SELECTED INDIVIDUALLY. REMARK 4 REMARK 4 3J23 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-AUG-12. REMARK 100 THE DEPOSITION ID IS D_1000160153. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : VITREOUS ICE (CRYO EM) REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : HUMAN ENTEROVIRUS 71 EMPTY REMARK 245 CAPSID REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.10 REMARK 245 SAMPLE SUPPORT DETAILS : GLOW DISCHARGED HOLEY CARBON REMARK 245 QUANTIFOIL ELECTRON MICROSCOPY REMARK 245 GRIDS REMARK 245 SAMPLE VITRIFICATION DETAILS : ETHANE-PROPANE MIXTURE REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : ICOSAHEDRAL VIRUS. THE SAMPLE REMARK 245 WAS PURIFIED MATURE VIRUS HEATED IN SOLUTION. REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : 17-APR-12 REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : 95.00 REMARK 245 MICROSCOPE MODEL : FEI TECNAI F20 REMARK 245 DETECTOR TYPE : KODAK SO-163 FILM REMARK 245 MINIMUM DEFOCUS (NM) : 1730.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 4370.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : 0.00 REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : 0.00 REMARK 245 NOMINAL CS : 2.00 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 1500.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 50000 REMARK 245 CALIBRATED MAGNIFICATION : 50000 REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT2 2 0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 2 0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT1 3 -0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT2 3 0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 3 0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT1 4 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT2 4 -0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT3 4 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT1 5 0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT2 5 -0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT3 5 0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 7 -0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 7 -0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT3 7 0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT1 8 0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 8 -0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT3 8 0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT1 9 0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 9 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 9 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT1 10 -0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 10 0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 10 0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT1 11 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 11 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 12 0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT2 12 -0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT3 12 -0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 13 -0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT2 13 -0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT3 13 -0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 14 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT2 14 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 14 -0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 15 0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT2 15 0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 15 -0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 16 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 16 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 16 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 17 -0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 17 0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 17 -0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 18 0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 18 0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 18 -0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 19 0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 19 -0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT3 19 -0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 20 -0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 20 -0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT3 20 -0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 21 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 21 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 21 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 22 -0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT2 22 -0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 22 0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT1 23 -0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT2 23 -0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 23 -0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT1 24 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 24 -0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 24 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT1 25 0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 25 -0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 25 0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT1 26 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 26 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 26 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 27 0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 27 -0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 27 -0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 28 0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 28 -0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 28 0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 29 -0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT2 29 -0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 29 0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 30 -0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT2 30 -0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 30 -0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 31 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 31 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 31 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 32 0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 32 0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT3 32 0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT1 33 0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 33 0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT3 33 -0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT1 34 -0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT2 34 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT3 34 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT1 35 -0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT2 35 0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT3 35 0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT1 36 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 36 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 36 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 37 -0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT2 37 0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT3 37 -0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 38 -0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT2 38 0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT3 38 0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 39 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 39 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT3 39 0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 40 0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 40 0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT3 40 -0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 41 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 41 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 41 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 42 0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT2 42 -0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 42 -0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT1 43 0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT2 43 0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 43 -0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT1 44 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT2 44 0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 44 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 45 0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT2 45 -0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 45 0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 46 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 46 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 46 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 47 0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT2 47 0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT3 47 0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 48 0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT2 48 -0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT3 48 0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 49 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT2 49 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT3 49 -0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT1 50 0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT2 50 0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT3 50 -0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT1 51 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 51 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 51 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 52 -0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 52 -0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 52 0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 53 -0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 53 0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 53 0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 54 -0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 54 0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 54 -0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT1 55 -0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 55 -0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 55 -0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT1 56 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 56 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 56 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 57 -0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 57 0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT3 57 -0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT1 58 -0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 58 -0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT3 58 -0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT1 59 -0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 59 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT3 59 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 60 -0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 60 0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT3 60 0.809017 -0.309017 -0.500000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PHE A 211 REMARK 465 GLY A 212 REMARK 465 GLU A 213 REMARK 465 HIS A 214 REMARK 465 LYS A 215 REMARK 465 GLN A 216 REMARK 465 GLU A 217 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 153 C - N - CA ANGL. DEV. = 10.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 85 -141.97 -54.95 REMARK 500 ARG A 86 126.40 62.09 REMARK 500 ALA A 117 -75.97 -33.19 REMARK 500 GLU A 124 15.69 -64.94 REMARK 500 CYS A 140 -169.46 -167.51 REMARK 500 PRO A 157 159.74 -48.41 REMARK 500 ARG A 166 7.44 -64.38 REMARK 500 GLU A 167 21.58 -145.80 REMARK 500 LEU A 169 -3.18 -53.61 REMARK 500 THR A 175 2.23 -68.88 REMARK 500 PRO A 186 168.38 -47.12 REMARK 500 SER A 196 137.21 -15.81 REMARK 500 ASN A 227 41.98 -62.88 REMARK 500 ILE A 262 89.03 30.26 REMARK 500 PRO A 265 120.34 -37.02 REMARK 500 ASN A 278 127.85 -39.97 REMARK 500 ALA A 289 156.35 -39.22 REMARK 500 THR A 295 -6.93 -140.36 REMARK 500 ALA B 14 134.41 167.69 REMARK 500 ALA B 28 74.14 167.53 REMARK 500 ALA B 29 -164.45 -56.06 REMARK 500 PRO B 39 91.78 -47.96 REMARK 500 ASP B 46 -164.48 -115.85 REMARK 500 LYS B 52 113.09 -34.98 REMARK 500 ASP B 57 -67.25 -107.26 REMARK 500 VAL B 58 -109.06 -18.79 REMARK 500 ASN B 61 79.57 -102.44 REMARK 500 ASP B 67 105.17 -42.61 REMARK 500 THR B 87 -6.10 -57.53 REMARK 500 PHE B 98 39.35 -87.28 REMARK 500 ALA B 136 41.87 75.06 REMARK 500 PRO B 147 -173.37 -58.55 REMARK 500 GLN B 152 73.69 -151.87 REMARK 500 PRO B 153 15.32 -66.13 REMARK 500 ALA B 168 15.22 -154.67 REMARK 500 SER B 173 0.20 -60.32 REMARK 500 TYR B 224 155.41 177.95 REMARK 500 CYS B 242 55.35 38.37 REMARK 500 ASN C 56 42.53 -82.21 REMARK 500 ASN C 57 41.97 -68.92 REMARK 500 ALA C 62 -54.10 -26.85 REMARK 500 THR C 63 39.10 -98.23 REMARK 500 VAL C 85 142.48 -170.67 REMARK 500 ARG C 92 154.54 -43.87 REMARK 500 ASN C 93 179.75 -46.99 REMARK 500 SER C 112 148.03 -174.51 REMARK 500 PRO C 137 158.13 -39.65 REMARK 500 PHE C 159 13.78 -68.56 REMARK 500 ALA C 179 68.15 -108.30 REMARK 500 HIS C 180 -99.67 -72.75 REMARK 500 REMARK 500 THIS ENTRY HAS 58 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-5465 RELATED DB: EMDB REMARK 900 CRYO-EM MAP OF THE EV71 A-PARTICLE REMARK 900 RELATED ID: EMD-5466 RELATED DB: EMDB REMARK 900 CRYO-EM MAP OF THE EV71 EMPTY CAPSID REMARK 900 RELATED ID: 3J22 RELATED DB: PDB REMARK 900 THE ENTEROVIRUS 71 A-PARTICLE REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE MODELED PROTEIN SEQUENCE WAS DERIVED FROM PDB ENTRY 3VBU. DBREF 3J23 A 73 297 UNP B2ZUN0 B2ZUN0_9ENTO 638 862 DBREF 3J23 B 13 249 UNP B2ZUN0 B2ZUN0_9ENTO 82 318 DBREF 3J23 C 1 239 UNP B2ZUN0 B2ZUN0_9ENTO 324 562 SEQADV 3J23 MET A 225 UNP B2ZUN0 CYS 790 SEE REMARK 999 SEQRES 1 A 225 HIS SER THR ALA GLU THR THR LEU ASP SER PHE PHE SER SEQRES 2 A 225 ARG ALA GLY LEU VAL GLY GLU ILE ASP LEU PRO LEU LYS SEQRES 3 A 225 GLY THR THR ASN PRO ASN GLY TYR ALA ASN TRP ASP ILE SEQRES 4 A 225 ASP ILE THR GLY TYR ALA GLN MET ARG ARG LYS VAL GLU SEQRES 5 A 225 LEU PHE THR TYR MET ARG PHE ASP ALA GLU PHE THR PHE SEQRES 6 A 225 VAL ALA CYS THR PRO THR GLY GLU VAL VAL PRO GLN LEU SEQRES 7 A 225 LEU GLN TYR MET PHE VAL PRO PRO GLY ALA PRO LYS PRO SEQRES 8 A 225 ASP SER ARG GLU SER LEU ALA TRP GLN THR ALA THR ASN SEQRES 9 A 225 PRO SER VAL PHE VAL LYS LEU SER ASP PRO PRO ALA GLN SEQRES 10 A 225 VAL SER VAL PRO PHE MET SER PRO ALA SER ALA TYR GLN SEQRES 11 A 225 TRP PHE TYR ASP GLY TYR PRO THR PHE GLY GLU HIS LYS SEQRES 12 A 225 GLN GLU LYS ASP LEU GLU TYR GLY ALA MET PRO ASN ASN SEQRES 13 A 225 MET MET GLY THR PHE SER VAL ARG THR VAL GLY THR SER SEQRES 14 A 225 LYS SER LYS TYR PRO LEU VAL VAL ARG ILE TYR MET ARG SEQRES 15 A 225 MET LYS HIS VAL ARG ALA TRP ILE PRO ARG PRO MET ARG SEQRES 16 A 225 ASN GLN ASN TYR LEU PHE LYS ALA ASN PRO ASN TYR ALA SEQRES 17 A 225 GLY ASN SER ILE LYS PRO THR GLY ALA SER ARG THR ALA SEQRES 18 A 225 ILE THR THR LEU SEQRES 1 B 237 VAL ALA GLN LEU THR ILE GLY ASN SER THR ILE THR THR SEQRES 2 B 237 GLN GLU ALA ALA ASN ILE ILE VAL GLY TYR GLY GLU TRP SEQRES 3 B 237 PRO SER TYR CYS SER ASP SER ASP ALA THR ALA VAL ASP SEQRES 4 B 237 LYS PRO THR ARG PRO ASP VAL SER VAL ASN ARG PHE TYR SEQRES 5 B 237 THR LEU ASP THR LYS LEU TRP GLU LYS SER SER LYS GLY SEQRES 6 B 237 TRP TYR TRP LYS PHE PRO ASP VAL LEU THR GLU THR GLY SEQRES 7 B 237 VAL PHE GLY GLN ASN ALA GLN PHE HIS TYR LEU TYR ARG SEQRES 8 B 237 SER GLY PHE CYS ILE HIS VAL GLN CYS ASN ALA SER LYS SEQRES 9 B 237 PHE HIS GLN GLY ALA LEU LEU VAL ALA VAL LEU PRO GLU SEQRES 10 B 237 TYR VAL ILE GLY THR VAL ALA GLY GLY THR GLY THR GLU SEQRES 11 B 237 ASP THR HIS PRO PRO TYR LYS GLN THR GLN PRO GLY ALA SEQRES 12 B 237 ASP GLY PHE GLU LEU GLN HIS PRO TYR VAL LEU ASP ALA SEQRES 13 B 237 GLY ILE PRO ILE SER GLN LEU THR VAL CYS PRO HIS GLN SEQRES 14 B 237 TRP ILE ASN LEU ARG THR ASN ASN CYS ALA THR ILE ILE SEQRES 15 B 237 VAL PRO TYR ILE ASN ALA LEU PRO PHE ASP SER ALA LEU SEQRES 16 B 237 ASN HIS CYS ASN PHE GLY LEU LEU VAL VAL PRO ILE SER SEQRES 17 B 237 PRO LEU ASP TYR ASP GLN GLY ALA THR PRO VAL ILE PRO SEQRES 18 B 237 ILE THR ILE THR LEU ALA PRO MET CYS SER GLU PHE ALA SEQRES 19 B 237 GLY LEU ARG SEQRES 1 C 239 GLY PHE PRO THR GLU LEU LYS PRO GLY THR ASN GLN PHE SEQRES 2 C 239 LEU THR THR ASP ASP GLY VAL SER ALA PRO ILE LEU PRO SEQRES 3 C 239 ASN PHE HIS PRO THR PRO CYS ILE HIS ILE PRO GLY GLU SEQRES 4 C 239 VAL ARG ASN LEU LEU GLU LEU CYS GLN VAL GLU THR ILE SEQRES 5 C 239 LEU GLU VAL ASN ASN VAL PRO THR ASN ALA THR SER LEU SEQRES 6 C 239 MET GLU ARG LEU ARG PHE PRO VAL SER ALA GLN ALA GLY SEQRES 7 C 239 LYS GLY GLU LEU CYS ALA VAL PHE ARG ALA ASP PRO GLY SEQRES 8 C 239 ARG ASN GLY PRO TRP GLN SER THR LEU LEU GLY GLN LEU SEQRES 9 C 239 CYS GLY TYR TYR THR GLN TRP SER GLY SER LEU GLU VAL SEQRES 10 C 239 THR PHE MET PHE THR GLY SER PHE MET ALA THR GLY LYS SEQRES 11 C 239 MET LEU ILE ALA TYR THR PRO PRO GLY GLY PRO LEU PRO SEQRES 12 C 239 LYS ASP ARG ALA THR ALA MET LEU GLY THR HIS VAL ILE SEQRES 13 C 239 TRP ASP PHE GLY LEU GLN SER SER VAL THR LEU VAL ILE SEQRES 14 C 239 PRO TRP ILE SER ASN THR HIS TYR ARG ALA HIS ALA ARG SEQRES 15 C 239 ASP GLY VAL PHE ASP TYR TYR THR THR GLY LEU VAL SER SEQRES 16 C 239 ILE TRP TYR GLN THR ASN TYR VAL VAL PRO ILE GLY ALA SEQRES 17 C 239 PRO ASN THR ALA TYR ILE ILE ALA LEU ALA ALA ALA GLN SEQRES 18 C 239 LYS ASN PHE THR MET LYS LEU CYS LYS ASP ALA SER ASP SEQRES 19 C 239 ILE LEU GLN THR GLY HELIX 1 1 THR A 79 SER A 85 1 7 HELIX 2 2 ASP A 112 ALA A 117 5 6 HELIX 3 3 GLN A 118 GLU A 124 1 7 HELIX 4 4 SER A 168 GLN A 172 5 5 HELIX 5 5 TYR B 35 GLU B 37 5 3 HELIX 6 6 PRO B 147 GLN B 152 1 6 HELIX 7 7 PRO B 153 GLY B 157 5 5 HELIX 8 8 HIS B 162 LEU B 166 5 5 HELIX 9 9 PRO B 171 CYS B 178 5 8 HELIX 10 10 LEU C 43 GLN C 48 1 6 HELIX 11 11 ASN C 61 ARG C 68 5 8 HELIX 12 12 GLY C 94 SER C 98 5 5 HELIX 13 13 THR C 99 GLY C 106 1 8 HELIX 14 14 ASP C 145 MET C 150 1 6 SHEET 1 A 5 GLY A 88 LEU A 95 0 SHEET 2 A 5 LEU A 247 PRO A 263 -1 O ILE A 251 N GLY A 91 SHEET 3 A 5 PHE A 126 CYS A 140 -1 N TYR A 128 O TRP A 261 SHEET 4 A 5 ALA A 188 VAL A 192 -1 O VAL A 190 N PHE A 135 SHEET 5 A 5 ALA C 22 PRO C 23 1 O ALA C 22 N SER A 191 SHEET 1 B 4 TYR A 201 GLN A 202 0 SHEET 2 B 4 PHE A 126 CYS A 140 -1 N MET A 129 O TYR A 201 SHEET 3 B 4 LEU A 247 PRO A 263 -1 O TRP A 261 N TYR A 128 SHEET 4 B 4 GLU C 39 VAL C 40 -1 O VAL C 40 N ALA A 260 SHEET 1 C 4 TYR A 106 ASP A 110 0 SHEET 2 C 4 THR A 232 THR A 237 -1 O VAL A 235 N ALA A 107 SHEET 3 C 4 LEU A 150 VAL A 156 -1 N MET A 154 O SER A 234 SHEET 4 C 4 SER A 178 LYS A 182 -1 O VAL A 179 N TYR A 153 SHEET 1 D 2 ALA B 14 THR B 17 0 SHEET 2 D 2 THR B 22 THR B 25 -1 O THR B 25 N ALA B 14 SHEET 1 E 5 ILE B 32 VAL B 33 0 SHEET 2 E 5 ALA B 191 VAL B 195 1 O ILE B 194 N ILE B 32 SHEET 3 E 5 HIS B 99 CYS B 112 -1 N ILE B 108 O ILE B 193 SHEET 4 E 5 ILE B 232 LEU B 248 -1 O GLU B 244 N ARG B 103 SHEET 5 E 5 TYR B 64 TRP B 71 -1 N LYS B 69 O ILE B 234 SHEET 1 F 4 TRP B 78 PHE B 82 0 SHEET 2 F 4 PHE B 212 ASP B 223 -1 O PHE B 212 N PHE B 82 SHEET 3 F 4 GLN B 119 PRO B 128 -1 N ALA B 125 O LEU B 215 SHEET 4 F 4 HIS B 180 ASN B 184 -1 O GLN B 181 N VAL B 124 SHEET 1 G 4 THR C 51 ILE C 52 0 SHEET 2 G 4 THR C 211 ALA C 220 -1 O ALA C 218 N THR C 51 SHEET 3 G 4 TYR C 108 PHE C 121 -1 N THR C 118 O LEU C 217 SHEET 4 G 4 SER C 164 ASN C 174 -1 O VAL C 165 N PHE C 119 SHEET 1 H 4 ARG C 70 SER C 74 0 SHEET 2 H 4 THR C 211 ALA C 220 -1 O ILE C 214 N PHE C 71 SHEET 3 H 4 TYR C 108 PHE C 121 -1 N THR C 118 O LEU C 217 SHEET 4 H 4 THR C 225 CYS C 229 -1 O LYS C 227 N GLN C 110 SHEET 1 I 4 LEU C 82 ALA C 88 0 SHEET 2 I 4 GLY C 192 TYR C 198 -1 O ILE C 196 N CYS C 83 SHEET 3 I 4 MET C 131 THR C 136 -1 N ALA C 134 O SER C 195 SHEET 4 I 4 HIS C 154 TRP C 157 -1 O TRP C 157 N MET C 131 SHEET 1 J 2 HIS C 176 ARG C 178 0 SHEET 2 J 2 VAL C 185 ASP C 187 -1 O VAL C 185 N ARG C 178 CISPEP 1 PHE B 82 PRO B 83 0 0.10 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000