HEADER VIRAL PROTEIN 30-NOV-12 3J2P TITLE CRYOEM STRUCTURE OF DENGUE VIRUS ENVELOPE PROTEIN HETEROTETRAMER COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENVELOPE PROTEIN E; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: UNP RESIDUES 281-775; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: SMALL ENVELOPE PROTEIN M; COMPND 7 CHAIN: B, D; COMPND 8 FRAGMENT: UNP RESIDUES 206-280; COMPND 9 SYNONYM: MATRIX PROTEIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DENGUE VIRUS 2; SOURCE 3 ORGANISM_COMMON: DENV-2; SOURCE 4 ORGANISM_TAXID: 11060; SOURCE 5 STRAIN: NEW GUINEA; SOURCE 6 CELL_LINE: MOSQUITO CELLS C6/36; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: DENGUE VIRUS 2; SOURCE 9 ORGANISM_COMMON: DENV-2; SOURCE 10 ORGANISM_TAXID: 11060; SOURCE 11 STRAIN: NEW GUINEA; SOURCE 12 CELL_LINE: MOSQUITO CELLS C6/36 KEYWDS FLAVIVIRUS, FUSION PROTEIN, PROTEIN COMPLEX, MEMBRANE, VIRAL PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR X.ZHANG,P.GE,X.YU,J.M.BRANNAN,G.BI,Q.ZHANG,S.SCHEIN,Z.H.ZHOU REVDAT 7 16-OCT-24 3J2P 1 HETSYN REVDAT 6 29-JUL-20 3J2P 1 COMPND REMARK HETNAM LINK REVDAT 6 2 1 SITE ATOM REVDAT 5 18-JUL-18 3J2P 1 REMARK REVDAT 4 12-OCT-16 3J2P 1 TITLE REVDAT 3 16-JAN-13 3J2P 1 JRNL REVDAT 2 26-DEC-12 3J2P 1 JRNL REVDAT 1 19-DEC-12 3J2P 0 JRNL AUTH X.ZHANG,P.GE,X.YU,J.M.BRANNAN,G.BI,Q.ZHANG,S.SCHEIN,Z.H.ZHOU JRNL TITL CRYO-EM STRUCTURE OF THE MATURE DENGUE VIRUS AT 3.5-A JRNL TITL 2 RESOLUTION. JRNL REF NAT.STRUCT.MOL.BIOL. V. 20 105 2012 JRNL REFN ISSN 1545-9993 JRNL PMID 23241927 JRNL DOI 10.1038/NSMB.2463 REMARK 2 REMARK 2 RESOLUTION. 3.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : EMAN REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : 1.076 REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.600 REMARK 3 NUMBER OF PARTICLES : 9288 REMARK 3 CTF CORRECTION METHOD : NULL REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: PREVIOUSLY CALIBRATED REMARK 3 WITH TMV PITCH REMARK 3 REMARK 3 OTHER DETAILS: EMAN WITH MULTI-PATH SIMULATED ANNEALING REMARK 4 REMARK 4 3J2P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-DEC-12. REMARK 100 THE DEPOSITION ID IS D_1000160175. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : VITREOUS ICE (CRYO EM) REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : DENGUE VIRUS 2 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : QUANTIFOIL R2/1 REMARK 245 SAMPLE VITRIFICATION DETAILS : 2.5 UL SAMPLE ADDED PER GRID, REMARK 245 PLUNGED INTO LIQUID ETHANE REMARK 245 SAMPLE BUFFER : TNE 50 MM TRIS, 140 MM NACL, 5 REMARK 245 MM EDTA REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : E:M:M:E HETEROTETRAMER. REMARK 245 ICOSAHEDRAL VIRION WITH ENVELOPE REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : 23-DEC-10 REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : KODAK SO-163 FILM REMARK 245 MINIMUM DEFOCUS (NM) : 500.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2400.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : 0.00 REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : 0.00 REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 2500.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 59000 REMARK 245 CALIBRATED MAGNIFICATION : 57518 REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER B 73 REMARK 465 MET B 74 REMARK 465 THR B 75 REMARK 465 SER D 73 REMARK 465 MET D 74 REMARK 465 THR D 75 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H GLU A 195 H MET A 196 1.20 REMARK 500 H GLU C 195 H MET C 196 1.20 REMARK 500 H SER B 22 H GLU B 23 1.27 REMARK 500 H SER D 22 H GLU D 23 1.27 REMARK 500 H ALA C 447 H PHE C 448 1.28 REMARK 500 H ALA A 447 H PHE A 448 1.28 REMARK 500 H ARG A 188 H THR A 189 1.28 REMARK 500 H ARG C 188 H THR C 189 1.28 REMARK 500 O ALA C 442 O ALA C 446 2.17 REMARK 500 O ALA A 442 O ALA A 446 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 80 C - N - CA ANGL. DEV. = 9.8 DEGREES REMARK 500 PRO A 80 C - N - CD ANGL. DEV. = -14.9 DEGREES REMARK 500 PRO A 143 C - N - CA ANGL. DEV. = 9.8 DEGREES REMARK 500 PRO A 222 C - N - CA ANGL. DEV. = -9.3 DEGREES REMARK 500 PRO C 80 C - N - CA ANGL. DEV. = 10.0 DEGREES REMARK 500 PRO C 80 C - N - CD ANGL. DEV. = -15.2 DEGREES REMARK 500 PRO C 143 C - N - CA ANGL. DEV. = 9.9 DEGREES REMARK 500 PRO C 222 C - N - CA ANGL. DEV. = -9.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 2 2.02 51.59 REMARK 500 ILE A 4 101.93 -50.48 REMARK 500 ILE A 6 15.52 -144.77 REMARK 500 SER A 7 -94.60 54.75 REMARK 500 ARG A 9 -176.92 175.36 REMARK 500 ASP A 10 146.40 163.27 REMARK 500 SER A 16 145.95 52.45 REMARK 500 SER A 19 -5.16 70.45 REMARK 500 HIS A 27 -86.95 61.30 REMARK 500 SER A 29 -49.76 -144.00 REMARK 500 CYS A 30 101.22 42.00 REMARK 500 LYS A 36 29.84 -71.67 REMARK 500 ASN A 37 167.05 165.62 REMARK 500 LYS A 38 128.06 82.99 REMARK 500 PRO A 39 95.21 -62.73 REMARK 500 THR A 40 150.67 -32.24 REMARK 500 ILE A 46 -114.20 -131.08 REMARK 500 GLU A 47 115.38 -39.47 REMARK 500 GLN A 52 51.80 70.19 REMARK 500 ARG A 57 -179.33 113.10 REMARK 500 LYS A 58 38.05 -176.24 REMARK 500 TYR A 59 141.61 -35.73 REMARK 500 ASN A 67 -18.92 65.95 REMARK 500 THR A 68 117.28 -12.34 REMARK 500 CYS A 74 151.44 110.59 REMARK 500 PRO A 75 110.41 -31.12 REMARK 500 THR A 76 -82.70 72.74 REMARK 500 GLN A 77 63.45 -46.64 REMARK 500 PRO A 80 145.34 -39.29 REMARK 500 LYS A 88 -10.07 -39.52 REMARK 500 PHE A 90 -159.27 -100.49 REMARK 500 ASP A 98 41.70 -90.06 REMARK 500 ARG A 99 97.02 -35.12 REMARK 500 CYS A 105 -113.44 -136.58 REMARK 500 PHE A 108 157.57 -41.04 REMARK 500 LYS A 110 150.14 160.69 REMARK 500 LYS A 123 96.97 82.73 REMARK 500 LYS A 126 125.51 79.32 REMARK 500 LYS A 128 136.90 164.30 REMARK 500 ASN A 134 39.71 105.02 REMARK 500 PRO A 143 -136.49 -70.20 REMARK 500 HIS A 144 -118.22 -151.96 REMARK 500 SER A 145 -38.53 70.12 REMARK 500 GLU A 147 -150.32 165.92 REMARK 500 ALA A 150 -149.83 62.83 REMARK 500 ASP A 154 -70.95 44.62 REMARK 500 LYS A 157 97.72 -173.72 REMARK 500 LYS A 160 -177.27 66.80 REMARK 500 PRO A 166 -1.05 -58.11 REMARK 500 GLN A 167 31.92 -82.44 REMARK 500 REMARK 500 THIS ENTRY HAS 408 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-5499 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-5520 RELATED DB: EMDB REMARK 900 RELATED ID: 3J27 RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE AUTHORS STATE THAT R15A (UNP R220A) IN SMALL ENVELOPE PROTEIN M REMARK 999 IS CORRECT FOR THE NEW GUINEA STRAIN. DBREF 3J2P A 1 495 UNP P14340 POLG_DEN2N 281 775 DBREF 3J2P B 1 75 UNP P14340 POLG_DEN2N 206 280 DBREF 3J2P C 1 495 UNP P14340 POLG_DEN2N 281 775 DBREF 3J2P D 1 75 UNP P14340 POLG_DEN2N 206 280 SEQADV 3J2P ALA B 15 UNP P14340 ARG 220 SEE REMARK 999 SEQADV 3J2P ALA D 15 UNP P14340 ARG 220 SEE REMARK 999 SEQRES 1 A 495 MET ARG CYS ILE GLY ILE SER ASN ARG ASP PHE VAL GLU SEQRES 2 A 495 GLY VAL SER GLY GLY SER TRP VAL ASP ILE VAL LEU GLU SEQRES 3 A 495 HIS GLY SER CYS VAL THR THR MET ALA LYS ASN LYS PRO SEQRES 4 A 495 THR LEU ASP PHE GLU LEU ILE GLU THR GLU ALA LYS GLN SEQRES 5 A 495 PRO ALA THR LEU ARG LYS TYR CYS ILE GLU ALA LYS LEU SEQRES 6 A 495 THR ASN THR THR THR ASP SER ARG CYS PRO THR GLN GLY SEQRES 7 A 495 GLU PRO SER LEU ASN GLU GLU GLN ASP LYS ARG PHE VAL SEQRES 8 A 495 CYS LYS HIS SER MET VAL ASP ARG GLY TRP GLY ASN GLY SEQRES 9 A 495 CYS GLY LEU PHE GLY LYS GLY GLY ILE VAL THR CYS ALA SEQRES 10 A 495 MET PHE THR CYS LYS LYS ASN MET LYS GLY LYS VAL VAL SEQRES 11 A 495 GLN PRO GLU ASN LEU GLU TYR THR ILE VAL ILE THR PRO SEQRES 12 A 495 HIS SER GLY GLU GLU HIS ALA VAL GLY ASN ASP THR GLY SEQRES 13 A 495 LYS HIS GLY LYS GLU ILE LYS ILE THR PRO GLN SER SER SEQRES 14 A 495 ILE THR GLU ALA GLU LEU THR GLY TYR GLY THR VAL THR SEQRES 15 A 495 MET GLU CYS SER PRO ARG THR GLY LEU ASP PHE ASN GLU SEQRES 16 A 495 MET VAL LEU LEU GLN MET GLU ASN LYS ALA TRP LEU VAL SEQRES 17 A 495 HIS ARG GLN TRP PHE LEU ASP LEU PRO LEU PRO TRP LEU SEQRES 18 A 495 PRO GLY ALA ASP THR GLN GLY SER ASN TRP ILE GLN LYS SEQRES 19 A 495 GLU THR LEU VAL THR PHE LYS ASN PRO HIS ALA LYS LYS SEQRES 20 A 495 GLN ASP VAL VAL VAL LEU GLY SER GLN GLU GLY ALA MET SEQRES 21 A 495 HIS THR ALA LEU THR GLY ALA THR GLU ILE GLN MET SER SEQRES 22 A 495 SER GLY ASN LEU LEU PHE THR GLY HIS LEU LYS CYS ARG SEQRES 23 A 495 LEU ARG MET ASP LYS LEU GLN LEU LYS GLY MET SER TYR SEQRES 24 A 495 SER MET CYS THR GLY LYS PHE LYS VAL VAL LYS GLU ILE SEQRES 25 A 495 ALA GLU THR GLN HIS GLY THR ILE VAL ILE ARG VAL GLN SEQRES 26 A 495 TYR GLU GLY ASP GLY SER PRO CYS LYS ILE PRO PHE GLU SEQRES 27 A 495 ILE MET ASP LEU GLU LYS ARG HIS VAL LEU GLY ARG LEU SEQRES 28 A 495 ILE THR VAL ASN PRO ILE VAL THR GLU LYS ASP SER PRO SEQRES 29 A 495 VAL ASN ILE GLU ALA GLU PRO PRO PHE GLY ASP SER TYR SEQRES 30 A 495 ILE ILE ILE GLY VAL GLU PRO GLY GLN LEU LYS LEU ASN SEQRES 31 A 495 TRP PHE LYS LYS GLY SER SER ILE GLY GLN MET ILE GLU SEQRES 32 A 495 THR THR MET ARG GLY ALA LYS ARG MET ALA ILE LEU GLY SEQRES 33 A 495 ASP THR ALA TRP ASP PHE GLY SER LEU GLY GLY VAL PHE SEQRES 34 A 495 THR SER ILE GLY LYS ALA LEU HIS GLN VAL PHE GLY ALA SEQRES 35 A 495 ILE TYR GLY ALA ALA PHE SER GLY VAL SER TRP ILE MET SEQRES 36 A 495 LYS ILE LEU ILE GLY VAL ILE ILE THR TRP ILE GLY MET SEQRES 37 A 495 ASN SER ARG SER THR SER LEU SER VAL SER LEU VAL LEU SEQRES 38 A 495 VAL GLY VAL VAL THR LEU TYR LEU GLY VAL MET VAL GLN SEQRES 39 A 495 ALA SEQRES 1 B 75 SER VAL ALA LEU VAL PRO HIS VAL GLY MET GLY LEU GLU SEQRES 2 B 75 THR ALA THR GLU THR TRP MET SER SER GLU GLY ALA TRP SEQRES 3 B 75 LYS HIS ALA GLN ARG ILE GLU THR TRP ILE LEU ARG HIS SEQRES 4 B 75 PRO GLY PHE THR ILE MET ALA ALA ILE LEU ALA TYR THR SEQRES 5 B 75 ILE GLY THR THR HIS PHE GLN ARG ALA LEU ILE PHE ILE SEQRES 6 B 75 LEU LEU THR ALA VAL ALA PRO SER MET THR SEQRES 1 C 495 MET ARG CYS ILE GLY ILE SER ASN ARG ASP PHE VAL GLU SEQRES 2 C 495 GLY VAL SER GLY GLY SER TRP VAL ASP ILE VAL LEU GLU SEQRES 3 C 495 HIS GLY SER CYS VAL THR THR MET ALA LYS ASN LYS PRO SEQRES 4 C 495 THR LEU ASP PHE GLU LEU ILE GLU THR GLU ALA LYS GLN SEQRES 5 C 495 PRO ALA THR LEU ARG LYS TYR CYS ILE GLU ALA LYS LEU SEQRES 6 C 495 THR ASN THR THR THR ASP SER ARG CYS PRO THR GLN GLY SEQRES 7 C 495 GLU PRO SER LEU ASN GLU GLU GLN ASP LYS ARG PHE VAL SEQRES 8 C 495 CYS LYS HIS SER MET VAL ASP ARG GLY TRP GLY ASN GLY SEQRES 9 C 495 CYS GLY LEU PHE GLY LYS GLY GLY ILE VAL THR CYS ALA SEQRES 10 C 495 MET PHE THR CYS LYS LYS ASN MET LYS GLY LYS VAL VAL SEQRES 11 C 495 GLN PRO GLU ASN LEU GLU TYR THR ILE VAL ILE THR PRO SEQRES 12 C 495 HIS SER GLY GLU GLU HIS ALA VAL GLY ASN ASP THR GLY SEQRES 13 C 495 LYS HIS GLY LYS GLU ILE LYS ILE THR PRO GLN SER SER SEQRES 14 C 495 ILE THR GLU ALA GLU LEU THR GLY TYR GLY THR VAL THR SEQRES 15 C 495 MET GLU CYS SER PRO ARG THR GLY LEU ASP PHE ASN GLU SEQRES 16 C 495 MET VAL LEU LEU GLN MET GLU ASN LYS ALA TRP LEU VAL SEQRES 17 C 495 HIS ARG GLN TRP PHE LEU ASP LEU PRO LEU PRO TRP LEU SEQRES 18 C 495 PRO GLY ALA ASP THR GLN GLY SER ASN TRP ILE GLN LYS SEQRES 19 C 495 GLU THR LEU VAL THR PHE LYS ASN PRO HIS ALA LYS LYS SEQRES 20 C 495 GLN ASP VAL VAL VAL LEU GLY SER GLN GLU GLY ALA MET SEQRES 21 C 495 HIS THR ALA LEU THR GLY ALA THR GLU ILE GLN MET SER SEQRES 22 C 495 SER GLY ASN LEU LEU PHE THR GLY HIS LEU LYS CYS ARG SEQRES 23 C 495 LEU ARG MET ASP LYS LEU GLN LEU LYS GLY MET SER TYR SEQRES 24 C 495 SER MET CYS THR GLY LYS PHE LYS VAL VAL LYS GLU ILE SEQRES 25 C 495 ALA GLU THR GLN HIS GLY THR ILE VAL ILE ARG VAL GLN SEQRES 26 C 495 TYR GLU GLY ASP GLY SER PRO CYS LYS ILE PRO PHE GLU SEQRES 27 C 495 ILE MET ASP LEU GLU LYS ARG HIS VAL LEU GLY ARG LEU SEQRES 28 C 495 ILE THR VAL ASN PRO ILE VAL THR GLU LYS ASP SER PRO SEQRES 29 C 495 VAL ASN ILE GLU ALA GLU PRO PRO PHE GLY ASP SER TYR SEQRES 30 C 495 ILE ILE ILE GLY VAL GLU PRO GLY GLN LEU LYS LEU ASN SEQRES 31 C 495 TRP PHE LYS LYS GLY SER SER ILE GLY GLN MET ILE GLU SEQRES 32 C 495 THR THR MET ARG GLY ALA LYS ARG MET ALA ILE LEU GLY SEQRES 33 C 495 ASP THR ALA TRP ASP PHE GLY SER LEU GLY GLY VAL PHE SEQRES 34 C 495 THR SER ILE GLY LYS ALA LEU HIS GLN VAL PHE GLY ALA SEQRES 35 C 495 ILE TYR GLY ALA ALA PHE SER GLY VAL SER TRP ILE MET SEQRES 36 C 495 LYS ILE LEU ILE GLY VAL ILE ILE THR TRP ILE GLY MET SEQRES 37 C 495 ASN SER ARG SER THR SER LEU SER VAL SER LEU VAL LEU SEQRES 38 C 495 VAL GLY VAL VAL THR LEU TYR LEU GLY VAL MET VAL GLN SEQRES 39 C 495 ALA SEQRES 1 D 75 SER VAL ALA LEU VAL PRO HIS VAL GLY MET GLY LEU GLU SEQRES 2 D 75 THR ALA THR GLU THR TRP MET SER SER GLU GLY ALA TRP SEQRES 3 D 75 LYS HIS ALA GLN ARG ILE GLU THR TRP ILE LEU ARG HIS SEQRES 4 D 75 PRO GLY PHE THR ILE MET ALA ALA ILE LEU ALA TYR THR SEQRES 5 D 75 ILE GLY THR THR HIS PHE GLN ARG ALA LEU ILE PHE ILE SEQRES 6 D 75 LEU LEU THR ALA VAL ALA PRO SER MET THR MODRES 3J2P ASN A 67 ASN GLYCOSYLATION SITE MODRES 3J2P ASN C 67 ASN GLYCOSYLATION SITE MODRES 3J2P ASN C 153 ASN GLYCOSYLATION SITE MODRES 3J2P ASN A 153 ASN GLYCOSYLATION SITE HET NAG E 1 14 HET NAG E 2 14 HET NAG F 1 14 HET NAG F 2 14 HET NAG A 501 14 HET NAG C 501 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 5 NAG 6(C8 H15 N O6) HELIX 1 1 LEU A 82 ASP A 87 5 6 HELIX 2 2 GLY A 100 CYS A 105 1 6 HELIX 3 3 ARG A 210 LEU A 214 1 5 HELIX 4 4 GLN A 256 LEU A 264 1 9 HELIX 5 5 SER A 396 GLY A 416 1 21 HELIX 6 6 ASP A 417 GLY A 423 5 7 HELIX 7 7 VAL A 428 ILE A 443 1 16 HELIX 8 8 TYR A 444 ALA A 447 5 4 HELIX 9 9 SER A 452 ASN A 469 1 18 HELIX 10 10 THR A 473 GLY A 483 1 11 HELIX 11 11 VAL A 484 VAL A 493 1 10 HELIX 12 12 SER B 22 HIS B 39 1 18 HELIX 13 13 HIS B 39 ILE B 53 1 15 HELIX 14 14 HIS B 57 ALA B 71 1 15 HELIX 15 15 LEU C 82 ASP C 87 5 6 HELIX 16 16 GLY C 100 CYS C 105 1 6 HELIX 17 17 ARG C 210 LEU C 214 1 5 HELIX 18 18 GLN C 256 LEU C 264 1 9 HELIX 19 19 SER C 396 GLY C 416 1 21 HELIX 20 20 ASP C 417 GLY C 423 5 7 HELIX 21 21 VAL C 428 ILE C 443 1 16 HELIX 22 22 TYR C 444 ALA C 447 5 4 HELIX 23 23 SER C 452 ASN C 469 1 18 HELIX 24 24 THR C 473 GLY C 483 1 11 HELIX 25 25 VAL C 484 VAL C 493 1 10 HELIX 26 26 SER D 22 HIS D 39 1 18 HELIX 27 27 HIS D 39 ILE D 53 1 15 HELIX 28 28 HIS D 57 ALA D 71 1 15 SHEET 1 A 5 PHE A 11 GLU A 13 0 SHEET 2 A 5 VAL A 31 MET A 34 1 O MET A 34 N VAL A 12 SHEET 3 A 5 LEU A 41 THR A 48 -1 O PHE A 43 N VAL A 31 SHEET 4 A 5 TYR A 137 THR A 142 -1 O THR A 142 N ASP A 42 SHEET 5 A 5 ILE A 162 ILE A 164 -1 O ILE A 164 N TYR A 137 SHEET 1 B 4 TRP A 20 LEU A 25 0 SHEET 2 B 4 LEU A 283 ARG A 288 -1 O LEU A 287 N VAL A 21 SHEET 3 B 4 GLY A 179 CYS A 185 -1 N THR A 182 O ARG A 288 SHEET 4 B 4 ILE A 170 LEU A 175 -1 N THR A 171 O MET A 183 SHEET 1 C 3 ALA A 63 SER A 72 0 SHEET 2 C 3 GLY A 111 CYS A 121 -1 O CYS A 116 N THR A 69 SHEET 3 C 3 CYS A 92 VAL A 97 -1 N SER A 95 O ILE A 113 SHEET 1 D 2 MET A 196 LEU A 199 0 SHEET 2 D 2 TRP A 206 HIS A 209 -1 O TRP A 206 N LEU A 199 SHEET 1 E 2 THR A 239 LYS A 241 0 SHEET 2 E 2 ASP A 249 VAL A 251 -1 O VAL A 251 N THR A 239 SHEET 1 F 3 LYS A 305 VAL A 308 0 SHEET 2 F 3 ILE A 320 GLU A 327 -1 O GLN A 325 N LYS A 307 SHEET 3 F 3 ASN A 366 ALA A 369 -1 O ALA A 369 N ILE A 320 SHEET 1 G 3 PHE A 337 MET A 340 0 SHEET 2 G 3 TYR A 377 ILE A 380 -1 O TYR A 377 N MET A 340 SHEET 3 G 3 LYS A 388 ASN A 390 -1 O LEU A 389 N ILE A 378 SHEET 1 H 5 PHE C 11 GLU C 13 0 SHEET 2 H 5 VAL C 31 MET C 34 1 O MET C 34 N VAL C 12 SHEET 3 H 5 LEU C 41 THR C 48 -1 O PHE C 43 N VAL C 31 SHEET 4 H 5 TYR C 137 THR C 142 -1 O THR C 142 N ASP C 42 SHEET 5 H 5 ILE C 162 ILE C 164 -1 O ILE C 164 N TYR C 137 SHEET 1 I 4 TRP C 20 LEU C 25 0 SHEET 2 I 4 LEU C 283 ARG C 288 -1 O LEU C 287 N VAL C 21 SHEET 3 I 4 GLY C 179 CYS C 185 -1 N THR C 182 O ARG C 288 SHEET 4 I 4 ILE C 170 LEU C 175 -1 N THR C 171 O MET C 183 SHEET 1 J 3 ALA C 63 SER C 72 0 SHEET 2 J 3 GLY C 111 CYS C 121 -1 O CYS C 116 N THR C 69 SHEET 3 J 3 CYS C 92 VAL C 97 -1 N SER C 95 O ILE C 113 SHEET 1 K 2 MET C 196 GLN C 200 0 SHEET 2 K 2 ALA C 205 HIS C 209 -1 O TRP C 206 N LEU C 199 SHEET 1 L 2 THR C 239 LYS C 241 0 SHEET 2 L 2 ASP C 249 VAL C 251 -1 O VAL C 251 N THR C 239 SHEET 1 M 3 LYS C 305 VAL C 308 0 SHEET 2 M 3 ILE C 320 GLU C 327 -1 O GLN C 325 N LYS C 307 SHEET 3 M 3 ASN C 366 ALA C 369 -1 O ALA C 369 N ILE C 320 SHEET 1 N 3 PHE C 337 MET C 340 0 SHEET 2 N 3 TYR C 377 ILE C 380 -1 O TYR C 377 N MET C 340 SHEET 3 N 3 LYS C 388 ASN C 390 -1 O LEU C 389 N ILE C 378 LINK ND2 ASN A 67 C1 NAG A 501 1555 1555 1.45 LINK ND2 ASN A 153 C1 NAG E 1 1555 1555 1.46 LINK ND2 ASN C 67 C1 NAG C 501 1555 1555 1.45 LINK ND2 ASN C 153 C1 NAG F 1 1555 1555 1.46 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.39 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.39 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000