data_3J3Z # _entry.id 3J3Z # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.296 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3J3Z RCSB RCSB160221 WWPDB D_1000160221 # _pdbx_database_related.db_name EMDB _pdbx_database_related.db_id EMD-5673 _pdbx_database_related.content_type 'associated EM volume' _pdbx_database_related.details . # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3J3Z _pdbx_database_status.recvd_initial_deposition_date 2013-05-21 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lee, H.' 1 'Cifuente, J.O.' 2 'Ashley, R.E.' 3 'Conway, J.F.' 4 'Makhov, A.M.' 5 'Tano, Y.' 6 'Shimizu, H.' 7 'Nishimura, Y.' 8 'Hafenstein, S.' 9 # _citation.id primary _citation.title ;A strain-specific epitope of enterovirus 71 identified by cryo-electron microscopy of the complex with fab from neutralizing antibody. ; _citation.journal_abbrev J.Virol. _citation.journal_volume 87 _citation.page_first 11363 _citation.page_last 11370 _citation.year 2013 _citation.journal_id_ASTM JOVIAM _citation.country US _citation.journal_id_ISSN 0022-538X _citation.journal_id_CSD 0825 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23946455 _citation.pdbx_database_id_DOI 10.1128/JVI.01926-13 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Lee, H.' 1 primary 'Cifuente, J.O.' 2 primary 'Ashley, R.E.' 3 primary 'Conway, J.F.' 4 primary 'Makhov, A.M.' 5 primary 'Tano, Y.' 6 primary 'Shimizu, H.' 7 primary 'Nishimura, Y.' 8 primary 'Hafenstein, S.' 9 # _cell.entry_id 3J3Z _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3J3Z _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'MA28-7 neutralizing antibody light chain' 23261.770 1 ? ? Fab ? 2 polymer nat 'MA28-7 neutralizing antibody heavy chain' 23349.105 1 ? ? Fab ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;DIVMTQSHKFMSTSVGDRVSITCKASQDVNTALAWYQQIPGQSPKLLIYSASNRYTGVPDRFTASGSGTDFTFTISSVQA EDLALYYCQQHYTTPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWAIDGAERAGGVL NSFTGQDSKDSTYSMSSTLTLTKDEYERHASYTCEATHKTSTAPIVKSFNRGAA ; ;DIVMTQSHKFMSTSVGDRVSITCKASQDVNTALAWYQQIPGQSPKLLIYSASNRYTGVPDRFTASGSGTDFTFTISSVQA EDLALYYCQQHYTTPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWAIDGAERAGGVL NSFTGQDSKDSTYSMSSTLTLTKDEYERHASYTCEATHKTSTAPIVKSFNRGAA ; L ? 2 'polypeptide(L)' no no ;AVHLQGTELVKPGASAGVKLSCKASGYTFTNYDMNWVRQRPEQGLEWIGWIFPGDGSTRYNEKFKGKATLTTDKSSSTAY QLNRLTSEDSAVYFCARRGFHGSYSFAYWGQGTLVTVSGAKTTAPSVYPLAPAAGAAGAGSSVTLGCLVKGYFPEPVTLT WNSGSLSSGVHTFPAVLADLYTLSSSVTVTSSTWPAESITCNVAHPASSTKVDKKIEPRG ; ;AVHLQGTELVKPGASAGVKLSCKASGYTFTNYDMNWVRQRPEQGLEWIGWIFPGDGSTRYNEKFKGKATLTTDKSSSTAY QLNRLTSEDSAVYFCARRGFHGSYSFAYWGQGTLVTVSGAKTTAPSVYPLAPAAGAAGAGSSVTLGCLVKGYFPEPVTLT WNSGSLSSGVHTFPAVLADLYTLSSSVTVTSSTWPAESITCNVAHPASSTKVDKKIEPRG ; H ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 ILE n 1 3 VAL n 1 4 MET n 1 5 THR n 1 6 GLN n 1 7 SER n 1 8 HIS n 1 9 LYS n 1 10 PHE n 1 11 MET n 1 12 SER n 1 13 THR n 1 14 SER n 1 15 VAL n 1 16 GLY n 1 17 ASP n 1 18 ARG n 1 19 VAL n 1 20 SER n 1 21 ILE n 1 22 THR n 1 23 CYS n 1 24 LYS n 1 25 ALA n 1 26 SER n 1 27 GLN n 1 28 ASP n 1 29 VAL n 1 30 ASN n 1 31 THR n 1 32 ALA n 1 33 LEU n 1 34 ALA n 1 35 TRP n 1 36 TYR n 1 37 GLN n 1 38 GLN n 1 39 ILE n 1 40 PRO n 1 41 GLY n 1 42 GLN n 1 43 SER n 1 44 PRO n 1 45 LYS n 1 46 LEU n 1 47 LEU n 1 48 ILE n 1 49 TYR n 1 50 SER n 1 51 ALA n 1 52 SER n 1 53 ASN n 1 54 ARG n 1 55 TYR n 1 56 THR n 1 57 GLY n 1 58 VAL n 1 59 PRO n 1 60 ASP n 1 61 ARG n 1 62 PHE n 1 63 THR n 1 64 ALA n 1 65 SER n 1 66 GLY n 1 67 SER n 1 68 GLY n 1 69 THR n 1 70 ASP n 1 71 PHE n 1 72 THR n 1 73 PHE n 1 74 THR n 1 75 ILE n 1 76 SER n 1 77 SER n 1 78 VAL n 1 79 GLN n 1 80 ALA n 1 81 GLU n 1 82 ASP n 1 83 LEU n 1 84 ALA n 1 85 LEU n 1 86 TYR n 1 87 TYR n 1 88 CYS n 1 89 GLN n 1 90 GLN n 1 91 HIS n 1 92 TYR n 1 93 THR n 1 94 THR n 1 95 PRO n 1 96 TRP n 1 97 THR n 1 98 PHE n 1 99 GLY n 1 100 GLY n 1 101 GLY n 1 102 THR n 1 103 LYS n 1 104 LEU n 1 105 GLU n 1 106 ILE n 1 107 LYS n 1 108 ARG n 1 109 ALA n 1 110 ASP n 1 111 ALA n 1 112 ALA n 1 113 PRO n 1 114 THR n 1 115 VAL n 1 116 SER n 1 117 ILE n 1 118 PHE n 1 119 PRO n 1 120 PRO n 1 121 SER n 1 122 SER n 1 123 GLU n 1 124 GLN n 1 125 LEU n 1 126 THR n 1 127 SER n 1 128 GLY n 1 129 GLY n 1 130 ALA n 1 131 SER n 1 132 VAL n 1 133 VAL n 1 134 CYS n 1 135 PHE n 1 136 LEU n 1 137 ASN n 1 138 ASN n 1 139 PHE n 1 140 TYR n 1 141 PRO n 1 142 LYS n 1 143 ASP n 1 144 ILE n 1 145 ASN n 1 146 VAL n 1 147 LYS n 1 148 TRP n 1 149 ALA n 1 150 ILE n 1 151 ASP n 1 152 GLY n 1 153 ALA n 1 154 GLU n 1 155 ARG n 1 156 ALA n 1 157 GLY n 1 158 GLY n 1 159 VAL n 1 160 LEU n 1 161 ASN n 1 162 SER n 1 163 PHE n 1 164 THR n 1 165 GLY n 1 166 GLN n 1 167 ASP n 1 168 SER n 1 169 LYS n 1 170 ASP n 1 171 SER n 1 172 THR n 1 173 TYR n 1 174 SER n 1 175 MET n 1 176 SER n 1 177 SER n 1 178 THR n 1 179 LEU n 1 180 THR n 1 181 LEU n 1 182 THR n 1 183 LYS n 1 184 ASP n 1 185 GLU n 1 186 TYR n 1 187 GLU n 1 188 ARG n 1 189 HIS n 1 190 ALA n 1 191 SER n 1 192 TYR n 1 193 THR n 1 194 CYS n 1 195 GLU n 1 196 ALA n 1 197 THR n 1 198 HIS n 1 199 LYS n 1 200 THR n 1 201 SER n 1 202 THR n 1 203 ALA n 1 204 PRO n 1 205 ILE n 1 206 VAL n 1 207 LYS n 1 208 SER n 1 209 PHE n 1 210 ASN n 1 211 ARG n 1 212 GLY n 1 213 ALA n 1 214 ALA n 2 1 ALA n 2 2 VAL n 2 3 HIS n 2 4 LEU n 2 5 GLN n 2 6 GLY n 2 7 THR n 2 8 GLU n 2 9 LEU n 2 10 VAL n 2 11 LYS n 2 12 PRO n 2 13 GLY n 2 14 ALA n 2 15 SER n 2 16 ALA n 2 17 GLY n 2 18 VAL n 2 19 LYS n 2 20 LEU n 2 21 SER n 2 22 CYS n 2 23 LYS n 2 24 ALA n 2 25 SER n 2 26 GLY n 2 27 TYR n 2 28 THR n 2 29 PHE n 2 30 THR n 2 31 ASN n 2 32 TYR n 2 33 ASP n 2 34 MET n 2 35 ASN n 2 36 TRP n 2 37 VAL n 2 38 ARG n 2 39 GLN n 2 40 ARG n 2 41 PRO n 2 42 GLU n 2 43 GLN n 2 44 GLY n 2 45 LEU n 2 46 GLU n 2 47 TRP n 2 48 ILE n 2 49 GLY n 2 50 TRP n 2 51 ILE n 2 52 PHE n 2 53 PRO n 2 54 GLY n 2 55 ASP n 2 56 GLY n 2 57 SER n 2 58 THR n 2 59 ARG n 2 60 TYR n 2 61 ASN n 2 62 GLU n 2 63 LYS n 2 64 PHE n 2 65 LYS n 2 66 GLY n 2 67 LYS n 2 68 ALA n 2 69 THR n 2 70 LEU n 2 71 THR n 2 72 THR n 2 73 ASP n 2 74 LYS n 2 75 SER n 2 76 SER n 2 77 SER n 2 78 THR n 2 79 ALA n 2 80 TYR n 2 81 GLN n 2 82 LEU n 2 83 ASN n 2 84 ARG n 2 85 LEU n 2 86 THR n 2 87 SER n 2 88 GLU n 2 89 ASP n 2 90 SER n 2 91 ALA n 2 92 VAL n 2 93 TYR n 2 94 PHE n 2 95 CYS n 2 96 ALA n 2 97 ARG n 2 98 ARG n 2 99 GLY n 2 100 PHE n 2 101 HIS n 2 102 GLY n 2 103 SER n 2 104 TYR n 2 105 SER n 2 106 PHE n 2 107 ALA n 2 108 TYR n 2 109 TRP n 2 110 GLY n 2 111 GLN n 2 112 GLY n 2 113 THR n 2 114 LEU n 2 115 VAL n 2 116 THR n 2 117 VAL n 2 118 SER n 2 119 GLY n 2 120 ALA n 2 121 LYS n 2 122 THR n 2 123 THR n 2 124 ALA n 2 125 PRO n 2 126 SER n 2 127 VAL n 2 128 TYR n 2 129 PRO n 2 130 LEU n 2 131 ALA n 2 132 PRO n 2 133 ALA n 2 134 ALA n 2 135 GLY n 2 136 ALA n 2 137 ALA n 2 138 GLY n 2 139 ALA n 2 140 GLY n 2 141 SER n 2 142 SER n 2 143 VAL n 2 144 THR n 2 145 LEU n 2 146 GLY n 2 147 CYS n 2 148 LEU n 2 149 VAL n 2 150 LYS n 2 151 GLY n 2 152 TYR n 2 153 PHE n 2 154 PRO n 2 155 GLU n 2 156 PRO n 2 157 VAL n 2 158 THR n 2 159 LEU n 2 160 THR n 2 161 TRP n 2 162 ASN n 2 163 SER n 2 164 GLY n 2 165 SER n 2 166 LEU n 2 167 SER n 2 168 SER n 2 169 GLY n 2 170 VAL n 2 171 HIS n 2 172 THR n 2 173 PHE n 2 174 PRO n 2 175 ALA n 2 176 VAL n 2 177 LEU n 2 178 ALA n 2 179 ASP n 2 180 LEU n 2 181 TYR n 2 182 THR n 2 183 LEU n 2 184 SER n 2 185 SER n 2 186 SER n 2 187 VAL n 2 188 THR n 2 189 VAL n 2 190 THR n 2 191 SER n 2 192 SER n 2 193 THR n 2 194 TRP n 2 195 PRO n 2 196 ALA n 2 197 GLU n 2 198 SER n 2 199 ILE n 2 200 THR n 2 201 CYS n 2 202 ASN n 2 203 VAL n 2 204 ALA n 2 205 HIS n 2 206 PRO n 2 207 ALA n 2 208 SER n 2 209 SER n 2 210 THR n 2 211 LYS n 2 212 VAL n 2 213 ASP n 2 214 LYS n 2 215 LYS n 2 216 ILE n 2 217 GLU n 2 218 PRO n 2 219 ARG n 2 220 GLY n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample ? ? mouse 'Mus musculus' 10090 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? mouse 'Mus musculus' 10090 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 PDB 3J3Z 3J3Z 1 1 ;DIVMTQSHKFMSTSVGDRVSITCKASQDVNTALAWYQQIPGQSPKLLIYSASNRYTGVPDRFTASGSGTDFTFTISSVQA EDLALYYCQQHYTTPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWAIDGAERAGGVL NSFTGQDSKDSTYSMSSTLTLTKDEYERHASYTCEATHKTSTAPIVKSFNRGAA ; ? 2 PDB 3J3Z 3J3Z 2 1 ;AVHLQGTELVKPGASAGVKLSCKASGYTFTNYDMNWVRQRPEQGLEWIGWIFPGDGSTRYNEKFKGKATLTTDKSSSTAY QLNRLTSEDSAVYFCARRGFHGSYSFAYWGQGTLVTVSGAKTTAPSVYPLAPAAGAAGAGSSVTLGCLVKGYFPEPVTLT WNSGSLSSGVHTFPAVLADLYTLSSSVTVTSSTWPAESITCNVAHPASSTKVDKKIEPRG ; ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3J3Z L 1 ? 214 ? 3J3Z 1 ? 214 ? 1 214 2 2 3J3Z H 1 ? 220 ? 3J3Z 1 ? 220 ? 1 220 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3J3Z _exptl.method 'ELECTRON MICROSCOPY' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine_hist.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3283 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 3283 _refine_hist.d_res_high . _refine_hist.d_res_low . # _struct.entry_id 3J3Z _struct.title ;Structure of MA28-7 neutralizing antibody Fab fragment from electron cryo-microscopy of enterovirus 71 complexed with a Fab fragment ; _struct.pdbx_descriptor 'MA28-7 neutralizing antibody light chain, MA28-7 neutralizing antibody heavy chain' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3J3Z _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text 'EV71, enterovirus, HFMD, strain-specific eptitope, VP1-145, IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLN A 79 ? LEU A 83 ? GLN L 79 LEU L 83 5 ? 5 HELX_P HELX_P2 2 SER A 121 ? SER A 127 ? SER L 121 SER L 127 1 ? 7 HELX_P HELX_P3 3 LYS A 183 ? GLU A 187 ? LYS L 183 GLU L 187 1 ? 5 HELX_P HELX_P4 4 THR B 28 ? TYR B 32 ? THR H 28 TYR H 32 5 ? 5 HELX_P HELX_P5 5 GLU B 62 ? LYS B 65 ? GLU H 62 LYS H 65 5 ? 4 HELX_P HELX_P6 6 SER B 163 ? SER B 165 ? SER H 163 SER H 165 5 ? 3 HELX_P HELX_P7 7 SER B 192 ? TRP B 194 ? SER H 192 TRP H 194 5 ? 3 HELX_P HELX_P8 8 PRO B 206 ? SER B 209 ? PRO H 206 SER H 209 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 23 SG ? ? ? 1_555 A CYS 88 SG ? ? L CYS 23 L CYS 88 1_555 ? ? ? ? ? ? ? 2.031 ? disulf2 disulf ? ? A CYS 134 SG ? ? ? 1_555 A CYS 194 SG ? ? L CYS 134 L CYS 194 1_555 ? ? ? ? ? ? ? 2.031 ? disulf3 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 95 SG ? ? H CYS 22 H CYS 95 1_555 ? ? ? ? ? ? ? 2.032 ? disulf4 disulf ? ? B CYS 147 SG ? ? ? 1_555 B CYS 201 SG ? ? H CYS 147 H CYS 201 1_555 ? ? ? ? ? ? ? 2.050 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 THR 94 A . ? THR 94 L PRO 95 A ? PRO 95 L 1 -0.07 2 TYR 140 A . ? TYR 140 L PRO 141 A ? PRO 141 L 1 1.72 3 PHE 153 B . ? PHE 153 H PRO 154 B ? PRO 154 H 1 -0.47 4 GLU 155 B . ? GLU 155 H PRO 156 B ? PRO 156 H 1 -0.26 5 TRP 194 B . ? TRP 194 H PRO 195 B ? PRO 195 H 1 0.45 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 6 ? C ? 4 ? D ? 4 ? E ? 4 ? F ? 4 ? G ? 5 ? H ? 5 ? I ? 4 ? J ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel G 1 2 ? anti-parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel G 4 5 ? anti-parallel H 1 2 ? anti-parallel H 2 3 ? anti-parallel H 3 4 ? anti-parallel H 4 5 ? anti-parallel I 1 2 ? anti-parallel I 2 3 ? anti-parallel I 3 4 ? anti-parallel J 1 2 ? anti-parallel J 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 MET A 4 ? THR A 5 ? MET L 4 THR L 5 A 2 VAL A 19 ? ALA A 25 ? VAL L 19 ALA L 25 A 3 ASP A 70 ? ILE A 75 ? ASP L 70 ILE L 75 A 4 PHE A 62 ? GLY A 66 ? PHE L 62 GLY L 66 B 1 PHE A 10 ? THR A 13 ? PHE L 10 THR L 13 B 2 THR A 102 ? ILE A 106 ? THR L 102 ILE L 106 B 3 LEU A 85 ? GLN A 90 ? LEU L 85 GLN L 90 B 4 LEU A 33 ? GLN A 38 ? LEU L 33 GLN L 38 B 5 LYS A 45 ? TYR A 49 ? LYS L 45 TYR L 49 B 6 ASN A 53 ? ARG A 54 ? ASN L 53 ARG L 54 C 1 PHE A 10 ? THR A 13 ? PHE L 10 THR L 13 C 2 THR A 102 ? ILE A 106 ? THR L 102 ILE L 106 C 3 LEU A 85 ? GLN A 90 ? LEU L 85 GLN L 90 C 4 THR A 97 ? PHE A 98 ? THR L 97 PHE L 98 D 1 THR A 114 ? PHE A 118 ? THR L 114 PHE L 118 D 2 GLY A 129 ? PHE A 139 ? GLY L 129 PHE L 139 D 3 TYR A 173 ? THR A 182 ? TYR L 173 THR L 182 D 4 VAL A 159 ? THR A 164 ? VAL L 159 THR L 164 E 1 ALA A 153 ? ARG A 155 ? ALA L 153 ARG L 155 E 2 ASN A 145 ? ILE A 150 ? ASN L 145 ILE L 150 E 3 SER A 191 ? THR A 197 ? SER L 191 THR L 197 E 4 ILE A 205 ? ASN A 210 ? ILE L 205 ASN L 210 F 1 HIS B 3 ? GLY B 6 ? HIS H 3 GLY H 6 F 2 LEU B 20 ? SER B 25 ? LEU H 20 SER H 25 F 3 THR B 78 ? GLN B 81 ? THR H 78 GLN H 81 F 4 THR B 71 ? ASP B 73 ? THR H 71 ASP H 73 G 1 THR B 58 ? TYR B 60 ? THR H 58 TYR H 60 G 2 GLY B 44 ? ILE B 51 ? GLY H 44 ILE H 51 G 3 MET B 34 ? ARG B 40 ? MET H 34 ARG H 40 G 4 ALA B 91 ? ARG B 97 ? ALA H 91 ARG H 97 G 5 TYR B 108 ? TRP B 109 ? TYR H 108 TRP H 109 H 1 THR B 58 ? TYR B 60 ? THR H 58 TYR H 60 H 2 GLY B 44 ? ILE B 51 ? GLY H 44 ILE H 51 H 3 MET B 34 ? ARG B 40 ? MET H 34 ARG H 40 H 4 ALA B 91 ? ARG B 97 ? ALA H 91 ARG H 97 H 5 THR B 113 ? VAL B 115 ? THR H 113 VAL H 115 I 1 SER B 126 ? LEU B 130 ? SER H 126 LEU H 130 I 2 SER B 142 ? TYR B 152 ? SER H 142 TYR H 152 I 3 TYR B 181 ? THR B 190 ? TYR H 181 THR H 190 I 4 VAL B 170 ? THR B 172 ? VAL H 170 THR H 172 J 1 THR B 158 ? TRP B 161 ? THR H 158 TRP H 161 J 2 THR B 200 ? HIS B 205 ? THR H 200 HIS H 205 J 3 THR B 210 ? LYS B 215 ? THR H 210 LYS H 215 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 5 ? N THR L 5 O LYS A 24 ? O LYS L 24 A 2 3 N CYS A 23 ? N CYS L 23 O PHE A 71 ? O PHE L 71 A 3 4 O THR A 74 ? O THR L 74 N THR A 63 ? N THR L 63 B 1 2 N THR A 13 ? N THR L 13 O GLU A 105 ? O GLU L 105 B 2 3 O THR A 102 ? O THR L 102 N TYR A 86 ? N TYR L 86 B 3 4 O GLN A 89 ? O GLN L 89 N ALA A 34 ? N ALA L 34 B 4 5 N TRP A 35 ? N TRP L 35 O LEU A 47 ? O LEU L 47 B 5 6 N TYR A 49 ? N TYR L 49 O ASN A 53 ? O ASN L 53 C 1 2 N THR A 13 ? N THR L 13 O GLU A 105 ? O GLU L 105 C 2 3 O THR A 102 ? O THR L 102 N TYR A 86 ? N TYR L 86 C 3 4 N GLN A 90 ? N GLN L 90 O THR A 97 ? O THR L 97 D 1 2 N PHE A 118 ? N PHE L 118 O VAL A 133 ? O VAL L 133 D 2 3 N VAL A 132 ? N VAL L 132 O LEU A 179 ? O LEU L 179 D 3 4 O SER A 176 ? O SER L 176 N SER A 162 ? N SER L 162 E 1 2 O ALA A 153 ? O ALA L 153 N ILE A 150 ? N ILE L 150 E 2 3 N LYS A 147 ? N LYS L 147 O GLU A 195 ? O GLU L 195 E 3 4 N ALA A 196 ? N ALA L 196 O ILE A 205 ? O ILE L 205 F 1 2 N GLN B 5 ? N GLN H 5 O LYS B 23 ? O LYS H 23 F 2 3 N LEU B 20 ? N LEU H 20 O GLN B 81 ? O GLN H 81 F 3 4 O TYR B 80 ? O TYR H 80 N THR B 71 ? N THR H 71 G 1 2 O ARG B 59 ? O ARG H 59 N TRP B 50 ? N TRP H 50 G 2 3 O GLU B 46 ? O GLU H 46 N ARG B 38 ? N ARG H 38 G 3 4 N VAL B 37 ? N VAL H 37 O PHE B 94 ? O PHE H 94 G 4 5 N ARG B 97 ? N ARG H 97 O TYR B 108 ? O TYR H 108 H 1 2 O ARG B 59 ? O ARG H 59 N TRP B 50 ? N TRP H 50 H 2 3 O GLU B 46 ? O GLU H 46 N ARG B 38 ? N ARG H 38 H 3 4 N VAL B 37 ? N VAL H 37 O PHE B 94 ? O PHE H 94 H 4 5 N TYR B 93 ? N TYR H 93 O THR B 113 ? O THR H 113 I 1 2 N TYR B 128 ? N TYR H 128 O LEU B 148 ? O LEU H 148 I 2 3 N VAL B 149 ? N VAL H 149 O LEU B 183 ? O LEU H 183 I 3 4 O SER B 186 ? O SER H 186 N HIS B 171 ? N HIS H 171 J 1 2 N THR B 160 ? N THR H 160 O ASN B 202 ? O ASN H 202 J 2 3 N HIS B 205 ? N HIS H 205 O THR B 210 ? O THR H 210 # _database_PDB_matrix.entry_id 3J3Z _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3J3Z _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 1 1 ASP ASP L . n A 1 2 ILE 2 2 2 ILE ILE L . n A 1 3 VAL 3 3 3 VAL VAL L . n A 1 4 MET 4 4 4 MET MET L . n A 1 5 THR 5 5 5 THR THR L . n A 1 6 GLN 6 6 6 GLN GLN L . n A 1 7 SER 7 7 7 SER SER L . n A 1 8 HIS 8 8 8 HIS HIS L . n A 1 9 LYS 9 9 9 LYS LYS L . n A 1 10 PHE 10 10 10 PHE PHE L . n A 1 11 MET 11 11 11 MET MET L . n A 1 12 SER 12 12 12 SER SER L . n A 1 13 THR 13 13 13 THR THR L . n A 1 14 SER 14 14 14 SER SER L . n A 1 15 VAL 15 15 15 VAL VAL L . n A 1 16 GLY 16 16 16 GLY GLY L . n A 1 17 ASP 17 17 17 ASP ASP L . n A 1 18 ARG 18 18 18 ARG ARG L . n A 1 19 VAL 19 19 19 VAL VAL L . n A 1 20 SER 20 20 20 SER SER L . n A 1 21 ILE 21 21 21 ILE ILE L . n A 1 22 THR 22 22 22 THR THR L . n A 1 23 CYS 23 23 23 CYS CYS L . n A 1 24 LYS 24 24 24 LYS LYS L . n A 1 25 ALA 25 25 25 ALA ALA L . n A 1 26 SER 26 26 26 SER SER L . n A 1 27 GLN 27 27 27 GLN GLN L . n A 1 28 ASP 28 28 28 ASP ASP L . n A 1 29 VAL 29 29 29 VAL VAL L . n A 1 30 ASN 30 30 30 ASN ASN L . n A 1 31 THR 31 31 31 THR THR L . n A 1 32 ALA 32 32 32 ALA ALA L . n A 1 33 LEU 33 33 33 LEU LEU L . n A 1 34 ALA 34 34 34 ALA ALA L . n A 1 35 TRP 35 35 35 TRP TRP L . n A 1 36 TYR 36 36 36 TYR TYR L . n A 1 37 GLN 37 37 37 GLN GLN L . n A 1 38 GLN 38 38 38 GLN GLN L . n A 1 39 ILE 39 39 39 ILE ILE L . n A 1 40 PRO 40 40 40 PRO PRO L . n A 1 41 GLY 41 41 41 GLY GLY L . n A 1 42 GLN 42 42 42 GLN GLN L . n A 1 43 SER 43 43 43 SER SER L . n A 1 44 PRO 44 44 44 PRO PRO L . n A 1 45 LYS 45 45 45 LYS LYS L . n A 1 46 LEU 46 46 46 LEU LEU L . n A 1 47 LEU 47 47 47 LEU LEU L . n A 1 48 ILE 48 48 48 ILE ILE L . n A 1 49 TYR 49 49 49 TYR TYR L . n A 1 50 SER 50 50 50 SER SER L . n A 1 51 ALA 51 51 51 ALA ALA L . n A 1 52 SER 52 52 52 SER SER L . n A 1 53 ASN 53 53 53 ASN ASN L . n A 1 54 ARG 54 54 54 ARG ARG L . n A 1 55 TYR 55 55 55 TYR TYR L . n A 1 56 THR 56 56 56 THR THR L . n A 1 57 GLY 57 57 57 GLY GLY L . n A 1 58 VAL 58 58 58 VAL VAL L . n A 1 59 PRO 59 59 59 PRO PRO L . n A 1 60 ASP 60 60 60 ASP ASP L . n A 1 61 ARG 61 61 61 ARG ARG L . n A 1 62 PHE 62 62 62 PHE PHE L . n A 1 63 THR 63 63 63 THR THR L . n A 1 64 ALA 64 64 64 ALA ALA L . n A 1 65 SER 65 65 65 SER SER L . n A 1 66 GLY 66 66 66 GLY GLY L . n A 1 67 SER 67 67 67 SER SER L . n A 1 68 GLY 68 68 68 GLY GLY L . n A 1 69 THR 69 69 69 THR THR L . n A 1 70 ASP 70 70 70 ASP ASP L . n A 1 71 PHE 71 71 71 PHE PHE L . n A 1 72 THR 72 72 72 THR THR L . n A 1 73 PHE 73 73 73 PHE PHE L . n A 1 74 THR 74 74 74 THR THR L . n A 1 75 ILE 75 75 75 ILE ILE L . n A 1 76 SER 76 76 76 SER SER L . n A 1 77 SER 77 77 77 SER SER L . n A 1 78 VAL 78 78 78 VAL VAL L . n A 1 79 GLN 79 79 79 GLN GLN L . n A 1 80 ALA 80 80 80 ALA ALA L . n A 1 81 GLU 81 81 81 GLU GLU L . n A 1 82 ASP 82 82 82 ASP ASP L . n A 1 83 LEU 83 83 83 LEU LEU L . n A 1 84 ALA 84 84 84 ALA ALA L . n A 1 85 LEU 85 85 85 LEU LEU L . n A 1 86 TYR 86 86 86 TYR TYR L . n A 1 87 TYR 87 87 87 TYR TYR L . n A 1 88 CYS 88 88 88 CYS CYS L . n A 1 89 GLN 89 89 89 GLN GLN L . n A 1 90 GLN 90 90 90 GLN GLN L . n A 1 91 HIS 91 91 91 HIS HIS L . n A 1 92 TYR 92 92 92 TYR TYR L . n A 1 93 THR 93 93 93 THR THR L . n A 1 94 THR 94 94 94 THR THR L . n A 1 95 PRO 95 95 95 PRO PRO L . n A 1 96 TRP 96 96 96 TRP TRP L . n A 1 97 THR 97 97 97 THR THR L . n A 1 98 PHE 98 98 98 PHE PHE L . n A 1 99 GLY 99 99 99 GLY GLY L . n A 1 100 GLY 100 100 100 GLY GLY L . n A 1 101 GLY 101 101 101 GLY GLY L . n A 1 102 THR 102 102 102 THR THR L . n A 1 103 LYS 103 103 103 LYS LYS L . n A 1 104 LEU 104 104 104 LEU LEU L . n A 1 105 GLU 105 105 105 GLU GLU L . n A 1 106 ILE 106 106 106 ILE ILE L . n A 1 107 LYS 107 107 107 LYS LYS L . n A 1 108 ARG 108 108 108 ARG ARG L . n A 1 109 ALA 109 109 109 ALA ALA L . n A 1 110 ASP 110 110 110 ASP ASP L . n A 1 111 ALA 111 111 111 ALA ALA L . n A 1 112 ALA 112 112 112 ALA ALA L . n A 1 113 PRO 113 113 113 PRO PRO L . n A 1 114 THR 114 114 114 THR THR L . n A 1 115 VAL 115 115 115 VAL VAL L . n A 1 116 SER 116 116 116 SER SER L . n A 1 117 ILE 117 117 117 ILE ILE L . n A 1 118 PHE 118 118 118 PHE PHE L . n A 1 119 PRO 119 119 119 PRO PRO L . n A 1 120 PRO 120 120 120 PRO PRO L . n A 1 121 SER 121 121 121 SER SER L . n A 1 122 SER 122 122 122 SER SER L . n A 1 123 GLU 123 123 123 GLU GLU L . n A 1 124 GLN 124 124 124 GLN GLN L . n A 1 125 LEU 125 125 125 LEU LEU L . n A 1 126 THR 126 126 126 THR THR L . n A 1 127 SER 127 127 127 SER SER L . n A 1 128 GLY 128 128 128 GLY GLY L . n A 1 129 GLY 129 129 129 GLY GLY L . n A 1 130 ALA 130 130 130 ALA ALA L . n A 1 131 SER 131 131 131 SER SER L . n A 1 132 VAL 132 132 132 VAL VAL L . n A 1 133 VAL 133 133 133 VAL VAL L . n A 1 134 CYS 134 134 134 CYS CYS L . n A 1 135 PHE 135 135 135 PHE PHE L . n A 1 136 LEU 136 136 136 LEU LEU L . n A 1 137 ASN 137 137 137 ASN ASN L . n A 1 138 ASN 138 138 138 ASN ASN L . n A 1 139 PHE 139 139 139 PHE PHE L . n A 1 140 TYR 140 140 140 TYR TYR L . n A 1 141 PRO 141 141 141 PRO PRO L . n A 1 142 LYS 142 142 142 LYS LYS L . n A 1 143 ASP 143 143 143 ASP ASP L . n A 1 144 ILE 144 144 144 ILE ILE L . n A 1 145 ASN 145 145 145 ASN ASN L . n A 1 146 VAL 146 146 146 VAL VAL L . n A 1 147 LYS 147 147 147 LYS LYS L . n A 1 148 TRP 148 148 148 TRP TRP L . n A 1 149 ALA 149 149 149 ALA ALA L . n A 1 150 ILE 150 150 150 ILE ILE L . n A 1 151 ASP 151 151 151 ASP ASP L . n A 1 152 GLY 152 152 152 GLY GLY L . n A 1 153 ALA 153 153 153 ALA ALA L . n A 1 154 GLU 154 154 154 GLU GLU L . n A 1 155 ARG 155 155 155 ARG ARG L . n A 1 156 ALA 156 156 156 ALA ALA L . n A 1 157 GLY 157 157 157 GLY GLY L . n A 1 158 GLY 158 158 158 GLY GLY L . n A 1 159 VAL 159 159 159 VAL VAL L . n A 1 160 LEU 160 160 160 LEU LEU L . n A 1 161 ASN 161 161 161 ASN ASN L . n A 1 162 SER 162 162 162 SER SER L . n A 1 163 PHE 163 163 163 PHE PHE L . n A 1 164 THR 164 164 164 THR THR L . n A 1 165 GLY 165 165 165 GLY GLY L . n A 1 166 GLN 166 166 166 GLN GLN L . n A 1 167 ASP 167 167 167 ASP ASP L . n A 1 168 SER 168 168 168 SER SER L . n A 1 169 LYS 169 169 169 LYS LYS L . n A 1 170 ASP 170 170 170 ASP ASP L . n A 1 171 SER 171 171 171 SER SER L . n A 1 172 THR 172 172 172 THR THR L . n A 1 173 TYR 173 173 173 TYR TYR L . n A 1 174 SER 174 174 174 SER SER L . n A 1 175 MET 175 175 175 MET MET L . n A 1 176 SER 176 176 176 SER SER L . n A 1 177 SER 177 177 177 SER SER L . n A 1 178 THR 178 178 178 THR THR L . n A 1 179 LEU 179 179 179 LEU LEU L . n A 1 180 THR 180 180 180 THR THR L . n A 1 181 LEU 181 181 181 LEU LEU L . n A 1 182 THR 182 182 182 THR THR L . n A 1 183 LYS 183 183 183 LYS LYS L . n A 1 184 ASP 184 184 184 ASP ASP L . n A 1 185 GLU 185 185 185 GLU GLU L . n A 1 186 TYR 186 186 186 TYR TYR L . n A 1 187 GLU 187 187 187 GLU GLU L . n A 1 188 ARG 188 188 188 ARG ARG L . n A 1 189 HIS 189 189 189 HIS HIS L . n A 1 190 ALA 190 190 190 ALA ALA L . n A 1 191 SER 191 191 191 SER SER L . n A 1 192 TYR 192 192 192 TYR TYR L . n A 1 193 THR 193 193 193 THR THR L . n A 1 194 CYS 194 194 194 CYS CYS L . n A 1 195 GLU 195 195 195 GLU GLU L . n A 1 196 ALA 196 196 196 ALA ALA L . n A 1 197 THR 197 197 197 THR THR L . n A 1 198 HIS 198 198 198 HIS HIS L . n A 1 199 LYS 199 199 199 LYS LYS L . n A 1 200 THR 200 200 200 THR THR L . n A 1 201 SER 201 201 201 SER SER L . n A 1 202 THR 202 202 202 THR THR L . n A 1 203 ALA 203 203 203 ALA ALA L . n A 1 204 PRO 204 204 204 PRO PRO L . n A 1 205 ILE 205 205 205 ILE ILE L . n A 1 206 VAL 206 206 206 VAL VAL L . n A 1 207 LYS 207 207 207 LYS LYS L . n A 1 208 SER 208 208 208 SER SER L . n A 1 209 PHE 209 209 209 PHE PHE L . n A 1 210 ASN 210 210 210 ASN ASN L . n A 1 211 ARG 211 211 211 ARG ARG L . n A 1 212 GLY 212 212 212 GLY GLY L . n A 1 213 ALA 213 213 213 ALA ALA L . n A 1 214 ALA 214 214 214 ALA ALA L . n B 2 1 ALA 1 1 1 ALA ALA H . n B 2 2 VAL 2 2 2 VAL VAL H . n B 2 3 HIS 3 3 3 HIS HIS H . n B 2 4 LEU 4 4 4 LEU LEU H . n B 2 5 GLN 5 5 5 GLN GLN H . n B 2 6 GLY 6 6 6 GLY GLY H . n B 2 7 THR 7 7 7 THR THR H . n B 2 8 GLU 8 8 8 GLU GLU H . n B 2 9 LEU 9 9 9 LEU LEU H . n B 2 10 VAL 10 10 10 VAL VAL H . n B 2 11 LYS 11 11 11 LYS LYS H . n B 2 12 PRO 12 12 12 PRO PRO H . n B 2 13 GLY 13 13 13 GLY GLY H . n B 2 14 ALA 14 14 14 ALA ALA H . n B 2 15 SER 15 15 15 SER SER H . n B 2 16 ALA 16 16 16 ALA ALA H . n B 2 17 GLY 17 17 17 GLY GLY H . n B 2 18 VAL 18 18 18 VAL VAL H . n B 2 19 LYS 19 19 19 LYS LYS H . n B 2 20 LEU 20 20 20 LEU LEU H . n B 2 21 SER 21 21 21 SER SER H . n B 2 22 CYS 22 22 22 CYS CYS H . n B 2 23 LYS 23 23 23 LYS LYS H . n B 2 24 ALA 24 24 24 ALA ALA H . n B 2 25 SER 25 25 25 SER SER H . n B 2 26 GLY 26 26 26 GLY GLY H . n B 2 27 TYR 27 27 27 TYR TYR H . n B 2 28 THR 28 28 28 THR THR H . n B 2 29 PHE 29 29 29 PHE PHE H . n B 2 30 THR 30 30 30 THR THR H . n B 2 31 ASN 31 31 31 ASN ASN H . n B 2 32 TYR 32 32 32 TYR TYR H . n B 2 33 ASP 33 33 33 ASP ASP H . n B 2 34 MET 34 34 34 MET MET H . n B 2 35 ASN 35 35 35 ASN ASN H . n B 2 36 TRP 36 36 36 TRP TRP H . n B 2 37 VAL 37 37 37 VAL VAL H . n B 2 38 ARG 38 38 38 ARG ARG H . n B 2 39 GLN 39 39 39 GLN GLN H . n B 2 40 ARG 40 40 40 ARG ARG H . n B 2 41 PRO 41 41 41 PRO PRO H . n B 2 42 GLU 42 42 42 GLU GLU H . n B 2 43 GLN 43 43 43 GLN GLN H . n B 2 44 GLY 44 44 44 GLY GLY H . n B 2 45 LEU 45 45 45 LEU LEU H . n B 2 46 GLU 46 46 46 GLU GLU H . n B 2 47 TRP 47 47 47 TRP TRP H . n B 2 48 ILE 48 48 48 ILE ILE H . n B 2 49 GLY 49 49 49 GLY GLY H . n B 2 50 TRP 50 50 50 TRP TRP H . n B 2 51 ILE 51 51 51 ILE ILE H . n B 2 52 PHE 52 52 52 PHE PHE H . n B 2 53 PRO 53 53 53 PRO PRO H . n B 2 54 GLY 54 54 54 GLY GLY H . n B 2 55 ASP 55 55 55 ASP ASP H . n B 2 56 GLY 56 56 56 GLY GLY H . n B 2 57 SER 57 57 57 SER SER H . n B 2 58 THR 58 58 58 THR THR H . n B 2 59 ARG 59 59 59 ARG ARG H . n B 2 60 TYR 60 60 60 TYR TYR H . n B 2 61 ASN 61 61 61 ASN ASN H . n B 2 62 GLU 62 62 62 GLU GLU H . n B 2 63 LYS 63 63 63 LYS LYS H . n B 2 64 PHE 64 64 64 PHE PHE H . n B 2 65 LYS 65 65 65 LYS LYS H . n B 2 66 GLY 66 66 66 GLY GLY H . n B 2 67 LYS 67 67 67 LYS LYS H . n B 2 68 ALA 68 68 68 ALA ALA H . n B 2 69 THR 69 69 69 THR THR H . n B 2 70 LEU 70 70 70 LEU LEU H . n B 2 71 THR 71 71 71 THR THR H . n B 2 72 THR 72 72 72 THR THR H . n B 2 73 ASP 73 73 73 ASP ASP H . n B 2 74 LYS 74 74 74 LYS LYS H . n B 2 75 SER 75 75 75 SER SER H . n B 2 76 SER 76 76 76 SER SER H . n B 2 77 SER 77 77 77 SER SER H . n B 2 78 THR 78 78 78 THR THR H . n B 2 79 ALA 79 79 79 ALA ALA H . n B 2 80 TYR 80 80 80 TYR TYR H . n B 2 81 GLN 81 81 81 GLN GLN H . n B 2 82 LEU 82 82 82 LEU LEU H . n B 2 83 ASN 83 83 83 ASN ASN H . n B 2 84 ARG 84 84 84 ARG ARG H . n B 2 85 LEU 85 85 85 LEU LEU H . n B 2 86 THR 86 86 86 THR THR H . n B 2 87 SER 87 87 87 SER SER H . n B 2 88 GLU 88 88 88 GLU GLU H . n B 2 89 ASP 89 89 89 ASP ASP H . n B 2 90 SER 90 90 90 SER SER H . n B 2 91 ALA 91 91 91 ALA ALA H . n B 2 92 VAL 92 92 92 VAL VAL H . n B 2 93 TYR 93 93 93 TYR TYR H . n B 2 94 PHE 94 94 94 PHE PHE H . n B 2 95 CYS 95 95 95 CYS CYS H . n B 2 96 ALA 96 96 96 ALA ALA H . n B 2 97 ARG 97 97 97 ARG ARG H . n B 2 98 ARG 98 98 98 ARG ARG H . n B 2 99 GLY 99 99 99 GLY GLY H . n B 2 100 PHE 100 100 100 PHE PHE H . n B 2 101 HIS 101 101 101 HIS HIS H . n B 2 102 GLY 102 102 102 GLY GLY H . n B 2 103 SER 103 103 103 SER SER H . n B 2 104 TYR 104 104 104 TYR TYR H . n B 2 105 SER 105 105 105 SER SER H . n B 2 106 PHE 106 106 106 PHE PHE H . n B 2 107 ALA 107 107 107 ALA ALA H . n B 2 108 TYR 108 108 108 TYR TYR H . n B 2 109 TRP 109 109 109 TRP TRP H . n B 2 110 GLY 110 110 110 GLY GLY H . n B 2 111 GLN 111 111 111 GLN GLN H . n B 2 112 GLY 112 112 112 GLY GLY H . n B 2 113 THR 113 113 113 THR THR H . n B 2 114 LEU 114 114 114 LEU LEU H . n B 2 115 VAL 115 115 115 VAL VAL H . n B 2 116 THR 116 116 116 THR THR H . n B 2 117 VAL 117 117 117 VAL VAL H . n B 2 118 SER 118 118 118 SER SER H . n B 2 119 GLY 119 119 119 GLY GLY H . n B 2 120 ALA 120 120 120 ALA ALA H . n B 2 121 LYS 121 121 121 LYS LYS H . n B 2 122 THR 122 122 122 THR THR H . n B 2 123 THR 123 123 123 THR THR H . n B 2 124 ALA 124 124 124 ALA ALA H . n B 2 125 PRO 125 125 125 PRO PRO H . n B 2 126 SER 126 126 126 SER SER H . n B 2 127 VAL 127 127 127 VAL VAL H . n B 2 128 TYR 128 128 128 TYR TYR H . n B 2 129 PRO 129 129 129 PRO PRO H . n B 2 130 LEU 130 130 130 LEU LEU H . n B 2 131 ALA 131 131 131 ALA ALA H . n B 2 132 PRO 132 132 132 PRO PRO H . n B 2 133 ALA 133 133 133 ALA ALA H . n B 2 134 ALA 134 134 134 ALA ALA H . n B 2 135 GLY 135 135 135 GLY GLY H . n B 2 136 ALA 136 136 136 ALA ALA H . n B 2 137 ALA 137 137 137 ALA ALA H . n B 2 138 GLY 138 138 138 GLY GLY H . n B 2 139 ALA 139 139 139 ALA ALA H . n B 2 140 GLY 140 140 140 GLY GLY H . n B 2 141 SER 141 141 141 SER SER H . n B 2 142 SER 142 142 142 SER SER H . n B 2 143 VAL 143 143 143 VAL VAL H . n B 2 144 THR 144 144 144 THR THR H . n B 2 145 LEU 145 145 145 LEU LEU H . n B 2 146 GLY 146 146 146 GLY GLY H . n B 2 147 CYS 147 147 147 CYS CYS H . n B 2 148 LEU 148 148 148 LEU LEU H . n B 2 149 VAL 149 149 149 VAL VAL H . n B 2 150 LYS 150 150 150 LYS LYS H . n B 2 151 GLY 151 151 151 GLY GLY H . n B 2 152 TYR 152 152 152 TYR TYR H . n B 2 153 PHE 153 153 153 PHE PHE H . n B 2 154 PRO 154 154 154 PRO PRO H . n B 2 155 GLU 155 155 155 GLU GLU H . n B 2 156 PRO 156 156 156 PRO PRO H . n B 2 157 VAL 157 157 157 VAL VAL H . n B 2 158 THR 158 158 158 THR THR H . n B 2 159 LEU 159 159 159 LEU LEU H . n B 2 160 THR 160 160 160 THR THR H . n B 2 161 TRP 161 161 161 TRP TRP H . n B 2 162 ASN 162 162 162 ASN ASN H . n B 2 163 SER 163 163 163 SER SER H . n B 2 164 GLY 164 164 164 GLY GLY H . n B 2 165 SER 165 165 165 SER SER H . n B 2 166 LEU 166 166 166 LEU LEU H . n B 2 167 SER 167 167 167 SER SER H . n B 2 168 SER 168 168 168 SER SER H . n B 2 169 GLY 169 169 169 GLY GLY H . n B 2 170 VAL 170 170 170 VAL VAL H . n B 2 171 HIS 171 171 171 HIS HIS H . n B 2 172 THR 172 172 172 THR THR H . n B 2 173 PHE 173 173 173 PHE PHE H . n B 2 174 PRO 174 174 174 PRO PRO H . n B 2 175 ALA 175 175 175 ALA ALA H . n B 2 176 VAL 176 176 176 VAL VAL H . n B 2 177 LEU 177 177 177 LEU LEU H . n B 2 178 ALA 178 178 178 ALA ALA H . n B 2 179 ASP 179 179 179 ASP ASP H . n B 2 180 LEU 180 180 180 LEU LEU H . n B 2 181 TYR 181 181 181 TYR TYR H . n B 2 182 THR 182 182 182 THR THR H . n B 2 183 LEU 183 183 183 LEU LEU H . n B 2 184 SER 184 184 184 SER SER H . n B 2 185 SER 185 185 185 SER SER H . n B 2 186 SER 186 186 186 SER SER H . n B 2 187 VAL 187 187 187 VAL VAL H . n B 2 188 THR 188 188 188 THR THR H . n B 2 189 VAL 189 189 189 VAL VAL H . n B 2 190 THR 190 190 190 THR THR H . n B 2 191 SER 191 191 191 SER SER H . n B 2 192 SER 192 192 192 SER SER H . n B 2 193 THR 193 193 193 THR THR H . n B 2 194 TRP 194 194 194 TRP TRP H . n B 2 195 PRO 195 195 195 PRO PRO H . n B 2 196 ALA 196 196 196 ALA ALA H . n B 2 197 GLU 197 197 197 GLU GLU H . n B 2 198 SER 198 198 198 SER SER H . n B 2 199 ILE 199 199 199 ILE ILE H . n B 2 200 THR 200 200 200 THR THR H . n B 2 201 CYS 201 201 201 CYS CYS H . n B 2 202 ASN 202 202 202 ASN ASN H . n B 2 203 VAL 203 203 203 VAL VAL H . n B 2 204 ALA 204 204 204 ALA ALA H . n B 2 205 HIS 205 205 205 HIS HIS H . n B 2 206 PRO 206 206 206 PRO PRO H . n B 2 207 ALA 207 207 207 ALA ALA H . n B 2 208 SER 208 208 208 SER SER H . n B 2 209 SER 209 209 209 SER SER H . n B 2 210 THR 210 210 210 THR THR H . n B 2 211 LYS 211 211 211 LYS LYS H . n B 2 212 VAL 212 212 212 VAL VAL H . n B 2 213 ASP 213 213 213 ASP ASP H . n B 2 214 LYS 214 214 214 LYS LYS H . n B 2 215 LYS 215 215 215 LYS LYS H . n B 2 216 ILE 216 216 216 ILE ILE H . n B 2 217 GLU 217 217 217 GLU GLU H . n B 2 218 PRO 218 218 218 PRO PRO H . n B 2 219 ARG 219 219 219 ARG ARG H . n B 2 220 GLY 220 220 220 GLY GLY H . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-08-28 2 'Structure model' 1 1 2013-11-06 3 'Structure model' 1 2 2014-04-09 4 'Structure model' 1 3 2018-07-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Source and taxonomy' 3 4 'Structure model' 'Data collection' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 4 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category em_software # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 4 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_em_software.image_processing_id' # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 3J3Z _em_3d_fitting.ref_protocol 'RIGID BODY FIT' _em_3d_fitting.ref_space REAL _em_3d_fitting.overall_b_value ? _em_3d_fitting.target_criteria 'correlation coefficient' _em_3d_fitting.details ;REFINEMENT PROTOCOL--rigid body DETAILS--The Fab structure was fitted manually, then refined in Chimera. ; _em_3d_fitting.method ? # loop_ _em_3d_fitting_list.3d_fitting_id _em_3d_fitting_list.id _em_3d_fitting_list.pdb_entry_id _em_3d_fitting_list.pdb_chain_id _em_3d_fitting_list.details 1 1 3GK8 H ? 1 2 3GK8 L ? # _em_3d_reconstruction.entry_id 3J3Z _em_3d_reconstruction.id 1 _em_3d_reconstruction.resolution_method 'FSC 0.5 CUT-OFF' _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.method 'Cross correlation coefficient' _em_3d_reconstruction.nominal_pixel_size 1.23 _em_3d_reconstruction.actual_pixel_size 1.23 _em_3d_reconstruction.resolution 23.4 _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.details ;The breaksym option in EMAN2 was used to search for the icosahedrally-related orientations. (Single particle details: Selected particles were low-pass filtered at 10 Angstrom. Asymmetric reconstruction was performed with the breaksym option in EMAN2.) (Single particle--Applied symmetry: C1) ; _em_3d_reconstruction.num_particles 27026 _em_3d_reconstruction.num_class_averages 2300 _em_3d_reconstruction.algorithm ? # _em_buffer.id 1 _em_buffer.pH 7.5 _em_buffer.details '10 mM Tris, 200 mM NaCl, 50 mM MgCl2' _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.name 'Enterovirus 71 complexed with Fab Fragment of MA28-7 neutralizing antibody' _em_entity_assembly.type VIRUS _em_entity_assembly.parent_id 0 _em_entity_assembly.synonym ? _em_entity_assembly.details ? _em_entity_assembly.oligomeric_details ? # _em_image_scans.entry_id 3J3Z _em_image_scans.id 1 _em_image_scans.image_recording_id 1 _em_image_scans.number_digital_images 45 _em_image_scans.citation_id ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.sampling_size ? _em_image_scans.scanner_model ? _em_image_scans.details ? # _em_imaging.entry_id 3J3Z _em_imaging.id 1 _em_imaging.date 2011-02-02 _em_imaging.specimen_id 1 _em_imaging.temperature 95 _em_imaging.microscope_model 'FEI TECNAI F20' _em_imaging.nominal_defocus_min 1900 _em_imaging.nominal_defocus_max 6120 _em_imaging.tilt_angle_min 0.0 _em_imaging.tilt_angle_max 0.0 _em_imaging.nominal_cs 2 _em_imaging.mode 'BRIGHT FIELD' _em_imaging.illumination_mode 'SPOT SCAN' _em_imaging.nominal_magnification 50000 _em_imaging.calibrated_magnification 48425 _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.accelerating_voltage 200 _em_imaging.details ? _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'GATAN LIQUID NITROGEN' _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.detector_distance 0.0 _em_imaging.electron_beam_tilt_params ? _em_imaging.astigmatism ? _em_imaging.citation_id ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details 'glow-discharged holey carbon Quantifoil electron microscopy grids' _em_sample_support.film_material ? _em_sample_support.grid_material ? _em_sample_support.grid_mesh_size ? _em_sample_support.grid_type ? _em_sample_support.method ? # _em_virus_entity.id 1 _em_virus_entity.virus_host_category VERTEBRATES _em_virus_entity.entity_assembly_id 1 _em_virus_entity.virus_type VIRION _em_virus_entity.virus_isolate STRAIN _em_virus_entity.empty NO _em_virus_entity.enveloped NO _em_virus_entity.details ? # _em_vitrification.entry_id 3J3Z _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.details 'Plunged into ethane-propane mixture (FEI VITROBOT MARK III)' _em_vitrification.cryogen_name OTHER _em_vitrification.humidity 95 _em_vitrification.temp 76 _em_vitrification.instrument 'FEI VITROBOT MARK III' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? # _em_experiment.entry_id 3J3Z _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' # _em_single_particle_entity.entry_id 3J3Z _em_single_particle_entity.id 1 _em_single_particle_entity.point_symmetry C1 _em_single_particle_entity.image_processing_id 1 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 N _pdbx_validate_rmsd_angle.auth_asym_id_1 H _pdbx_validate_rmsd_angle.auth_comp_id_1 GLY _pdbx_validate_rmsd_angle.auth_seq_id_1 56 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CA _pdbx_validate_rmsd_angle.auth_asym_id_2 H _pdbx_validate_rmsd_angle.auth_comp_id_2 GLY _pdbx_validate_rmsd_angle.auth_seq_id_2 56 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 C _pdbx_validate_rmsd_angle.auth_asym_id_3 H _pdbx_validate_rmsd_angle.auth_comp_id_3 GLY _pdbx_validate_rmsd_angle.auth_seq_id_3 56 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 96.36 _pdbx_validate_rmsd_angle.angle_target_value 113.10 _pdbx_validate_rmsd_angle.angle_deviation -16.74 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN L 30 ? ? 52.27 -112.88 2 1 ALA L 51 ? ? 70.06 -45.91 3 1 SER L 52 ? ? -146.81 33.20 4 1 SER L 67 ? ? -176.68 109.66 5 1 LYS H 11 ? ? -117.32 75.32 6 1 ALA H 14 ? ? -62.86 75.41 7 1 SER H 15 ? ? -179.65 -54.17 8 1 ASP H 55 ? ? 87.06 88.49 9 1 SER H 57 ? ? 49.31 -112.85 10 1 ARG H 59 ? ? -178.01 105.80 11 1 LYS H 65 ? ? -22.67 -98.14 12 1 ASP H 73 ? ? -167.81 114.36 13 1 LYS H 74 ? ? -71.45 -164.76 14 1 SER H 75 ? ? 58.38 11.78 15 1 SER H 76 ? ? -162.75 -8.67 16 1 ASN H 83 ? ? 61.76 102.35 17 1 ARG H 84 ? ? -86.53 -90.72 18 1 THR H 86 ? ? 66.68 121.81 19 1 SER H 87 ? ? 175.83 -39.01 20 1 ALA H 91 ? ? 177.03 -169.03 21 1 TYR H 104 ? ? -68.64 5.26 22 1 ALA H 136 ? ? 47.01 -133.21 23 1 ALA H 137 ? ? -179.70 42.65 24 1 LEU H 177 ? ? -57.39 -166.12 25 1 ALA H 178 ? ? 127.92 38.61 26 1 ASP H 179 ? ? 83.29 -41.97 27 1 TYR H 181 ? ? -17.22 130.57 28 1 SER H 198 ? ? -42.04 151.13 # _em_ctf_correction.id 1 _em_ctf_correction.details Each _em_ctf_correction.type . # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.value 8.05 _em_entity_assembly_molwt.units MEGADALTONS # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.avg_electron_dose_per_image 15 _em_image_recording.details ? _em_image_recording.id 1 _em_image_recording.film_or_detector_model 'KODAK SO-163 FILM' _em_image_recording.imaging_id 1 _em_image_recording.detector_mode ? _em_image_recording.average_exposure_time ? _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.id _em_software.name _em_software.version _em_software.category _em_software.details _em_software.image_processing_id 1 'UCSF Chimera' ? 'MODEL FITTING' ? ? 2 EMAN 2 RECONSTRUCTION ? 1 # _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.concentration ? _em_specimen.vitrification_applied YES _em_specimen.staining_applied NO _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.details ? # _em_virus_natural_host.entity_assembly_id 1 _em_virus_natural_host.id 1 _em_virus_natural_host.ncbi_tax_id 9606 _em_virus_natural_host.organism 'Homo sapiens' _em_virus_natural_host.strain ? #