HEADER VIRUS/IMMUNE SYSTEM 21-JAN-14 3J69 OBSLTE 27-JAN-16 3J69 3JBD TITLE ELECTRON CRYO-MICROSCOPY OF NANOBODY PVSP6A IN COMPLEX WITH POLIOVIRUS TITLE 2 P1/MAHONEY CAVEAT 3J69 RESIDUES 4 MYR 1 AND 4 GLY 2 ARE NOT PROPERLY LINKED. CAVEAT 3J69 RESIDUES 7 GLN 3 AND 7 LEU 4 ARE NOT PROPERLY LINKED. CAVEAT 3J69 RESIDUES 7 GLY 10 AND 7 SER 11 ARE NOT PROPERLY LINKED. CAVEAT 3J69 RESIDUES 7 ALA 24 AND 7 SER 25 ARE NOT PROPERLY LINKED. CAVEAT 3J69 RESIDUES 7 TYR 33 AND 7 MET 34 ARE NOT PROPERLY LINKED. CAVEAT 3J69 RESIDUES 7 GLU 42 AND 7 LYS 43 ARE NOT PROPERLY LINKED. CAVEAT 3J69 RESIDUES 7 VAL 51 AND 7 ARG 52 ARE NOT PROPERLY LINKED. CAVEAT 3J69 RESIDUES 7 SER 119 AND 7 SER 120 ARE NOT PROPERLY LINKED. COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN VP1; COMPND 3 CHAIN: 1; COMPND 4 FRAGMENT: UNP RESIDUES 580-881; COMPND 5 SYNONYM: P1D, VIRION PROTEIN 1; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: CAPSID PROTEIN VP2; COMPND 8 CHAIN: 2; COMPND 9 FRAGMENT: UNP RESIDUES 70-341; COMPND 10 SYNONYM: P1B, VIRION PROTEIN 2; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: CAPSID PROTEIN VP3; COMPND 13 CHAIN: 3; COMPND 14 FRAGMENT: UNP RESIDUES 342-579; COMPND 15 SYNONYM: P1C, VIRION PROTEIN 3; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: CAPSID PROTEIN VP4; COMPND 18 CHAIN: 4; COMPND 19 FRAGMENT: UNP RESIDUES 2-69; COMPND 20 SYNONYM: P1A, VIRION PROTEIN 4; COMPND 21 MOL_ID: 5; COMPND 22 MOLECULE: NANOBODY VHH PVSP6A; COMPND 23 CHAIN: 7; COMPND 24 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN POLIOVIRUS 1; SOURCE 3 ORGANISM_TAXID: 12081; SOURCE 4 STRAIN: MAHONEY; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: HUMAN POLIOVIRUS 1; SOURCE 7 ORGANISM_TAXID: 12081; SOURCE 8 STRAIN: MAHONEY; SOURCE 9 MOL_ID: 3; SOURCE 10 ORGANISM_SCIENTIFIC: HUMAN POLIOVIRUS 1; SOURCE 11 ORGANISM_TAXID: 12081; SOURCE 12 STRAIN: MAHONEY; SOURCE 13 MOL_ID: 4; SOURCE 14 ORGANISM_SCIENTIFIC: HUMAN POLIOVIRUS 1; SOURCE 15 ORGANISM_TAXID: 12081; SOURCE 16 STRAIN: MAHONEY; SOURCE 17 MOL_ID: 5; SOURCE 18 ORGANISM_SCIENTIFIC: CAMELUS DROMEDARIUS; SOURCE 19 ORGANISM_COMMON: DROMEDARY; SOURCE 20 ORGANISM_TAXID: 9838; SOURCE 21 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 22 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 23 EXPRESSION_SYSTEM_STRAIN: WK6; SOURCE 24 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 25 EXPRESSION_SYSTEM_PLASMID: PHEN6(C) KEYWDS PICORNAVIRUS, NANOBODY, ANTIBODY, VHH, POLIOVIRUS, MECHANISM OF KEYWDS 2 NEUTRALIZATION, VIRUS-IMMUNE SYSTEM COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR L.SCHOTTE,M.STRAUSS,B.THYS,H.HALEWYCK,D.J.FILMAN,M.BOSTINA,J.M.HOGLE, AUTHOR 2 B.ROMBAUT REVDAT 3 27-JAN-16 3J69 1 OBSLTE REVDAT 2 09-APR-14 3J69 1 JRNL REVDAT 1 19-FEB-14 3J69 0 JRNL AUTH L.SCHOTTE,M.STRAUSS,B.THYS,H.HALEWYCK,D.J.FILMAN,M.BOSTINA, JRNL AUTH 2 J.M.HOGLE,B.ROMBAUT JRNL TITL MECHANISM OF ACTION AND CAPSID-STABILIZING PROPERTIES OF JRNL TITL 2 VHHS WITH AN IN VITRO ANTIPOLIOVIRAL ACTIVITY. JRNL REF J.VIROL. V. 88 4403 2014 JRNL REFN ISSN 0022-538X JRNL PMID 24501405 JRNL DOI 10.1128/JVI.03402-13 REMARK 2 REMARK 2 RESOLUTION. 4.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : REFMAC5, COOT, SPDBV REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 1HXS REMARK 3 REFINEMENT SPACE : RECIPROCAL REMARK 3 REFINEMENT PROTOCOL : RIGID BODY WITH SOME FLEXIBLE REMARK 3 LOOPS AND SIDE CHAINS REMARK 3 REFINEMENT TARGET : STEREOCHEMICALLY RESTRAINED REMARK 3 MAXIMUM LIKELIHOOD REFINEMENT OF REMARK 3 BOTH FOURIER PHASE AND AMPLITUDE REMARK 3 AGREEMENT REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : 1.681 REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : 1.681 REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 4.800 REMARK 3 NUMBER OF PARTICLES : 57282 REMARK 3 CTF CORRECTION METHOD : PER PARTICLE REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: (SINGLE PARTICLE DETAILS: THE PARTICLES WERE REMARK 3 PROCESSED USING FREALIGN.) (SINGLE PARTICLE--APPLIED SYMMETRY: I) REMARK 4 REMARK 4 3J69 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-JAN-14. REMARK 100 THE RCSB ID CODE IS RCSB160303. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : VITREOUS ICE (CRYO EM) REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : ICOSAHEDRAL REMARK 245 NAME OF SAMPLE : NANOBODY AB6 IN COMPLEX WITH REMARK 245 POLIOVIRUS P1/MAHONEY REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : QUANTIFOIL R2/2 REMARK 245 SAMPLE VITRIFICATION DETAILS : 2 SECOND BLOT, PLUNGED INTO REMARK 245 LIQUID ETHANE REMARK 245 SAMPLE BUFFER : PBS REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : 1 REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : 17-OCT-12 REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 6223 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN ULTRASCAN 4000 (4K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 3000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : 0.00 REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : 0.00 REMARK 245 NOMINAL CS : 2.60 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 25.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 96000 REMARK 245 CALIBRATED MAGNIFICATION : 89232 REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: 1, 2, 3, 4, 7 REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT2 2 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT3 2 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT1 3 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT2 3 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 3 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 4 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 4 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 4 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 5 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 5 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT3 5 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 7 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 7 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 7 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT1 8 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 8 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 8 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 9 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT2 9 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 9 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 10 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT2 10 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 10 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 11 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 12 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 12 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT3 12 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 13 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 13 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 13 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 14 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT2 14 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 14 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 15 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT2 15 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT3 15 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 16 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 16 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 16 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 17 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT2 17 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 17 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 18 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT2 18 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 18 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 19 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 19 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 19 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 20 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 20 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 20 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 21 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 21 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 21 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 22 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT2 22 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT3 22 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT1 23 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 23 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT3 23 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 24 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 24 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 24 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 25 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT2 25 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 25 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT1 26 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 26 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 26 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 27 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT2 27 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 27 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 28 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 28 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 28 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 29 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 29 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT3 29 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 30 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT2 30 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT3 30 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 31 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 31 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 31 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 32 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 32 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 32 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT1 33 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 33 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 33 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 34 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 34 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT3 34 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 35 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 35 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT3 35 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT1 36 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 36 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 36 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 37 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 37 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT3 37 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 38 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 38 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT3 38 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 39 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 39 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 39 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 40 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 40 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 40 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 41 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 41 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 41 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 42 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT2 42 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT3 42 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT1 43 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 43 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 43 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT1 44 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 44 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 44 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 45 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT2 45 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT3 45 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 46 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 46 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 46 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 47 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 47 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT3 47 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 48 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 48 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 48 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 49 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 49 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 49 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT1 50 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 50 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT3 50 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT1 51 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 51 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 51 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 52 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT2 52 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 52 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 53 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 53 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 53 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 54 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 54 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 54 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT1 55 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT2 55 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 55 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT1 56 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 56 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 56 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 57 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 57 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 57 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT1 58 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 58 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 58 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT1 59 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 59 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 59 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 60 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 60 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 60 0.309017 0.809017 -0.500000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY 1 1 REMARK 465 LEU 1 2 REMARK 465 GLY 1 3 REMARK 465 GLN 1 4 REMARK 465 MET 1 5 REMARK 465 LEU 1 6 REMARK 465 GLU 1 7 REMARK 465 SER 1 8 REMARK 465 MET 1 9 REMARK 465 ILE 1 10 REMARK 465 ASP 1 11 REMARK 465 ASN 1 12 REMARK 465 THR 1 13 REMARK 465 VAL 1 14 REMARK 465 ARG 1 15 REMARK 465 GLU 1 16 REMARK 465 THR 1 17 REMARK 465 VAL 1 18 REMARK 465 GLY 1 19 REMARK 465 SER 2 1 REMARK 465 PRO 2 2 REMARK 465 ASN 2 3 REMARK 465 ILE 2 4 REMARK 465 GLU 2 5 REMARK 465 LEU 3 236 REMARK 465 ALA 3 237 REMARK 465 GLN 3 238 REMARK 465 HIS 7 121 REMARK 465 HIS 7 122 REMARK 465 HIS 7 123 REMARK 465 HIS 7 124 REMARK 465 HIS 7 125 REMARK 465 HIS 7 126 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN 7 13 OG SER 7 120 1.07 REMARK 500 O GLU 7 42 CG LYS 7 43 1.26 REMARK 500 CA CYS 7 96 N ALA 7 97 1.44 REMARK 500 C GLU 7 42 CG LYS 7 43 1.46 REMARK 500 O1 MYR 4 1 N GLY 4 2 1.54 REMARK 500 O ALA 7 24 N SER 7 25 1.60 REMARK 500 CA GLY 7 106 N TYR 7 107 1.62 REMARK 500 CB ALA 7 35 OH TYR 7 107 1.68 REMARK 500 CE MET 7 93 CA GLY 7 113 1.71 REMARK 500 O SER 7 7 N GLY 7 8 1.73 REMARK 500 C CYS 7 96 CA ALA 7 97 1.79 REMARK 500 CD GLN 7 13 OG SER 7 120 1.83 REMARK 500 CD LYS 1 297 OE2 GLU 7 44 1.92 REMARK 500 O ALA 7 35 O ALA 7 97 2.10 REMARK 500 N ALA 7 35 O ALA 7 97 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS 1 65 NE2 HIS 1 65 CD2 -0.070 REMARK 500 HIS 1 69 NE2 HIS 1 69 CD2 -0.070 REMARK 500 HIS 1 207 NE2 HIS 1 207 CD2 -0.068 REMARK 500 SER 1 206 C HIS 1 207 N 0.168 REMARK 500 HIS 2 109 NE2 HIS 2 109 CD2 -0.072 REMARK 500 HIS 2 118 NE2 HIS 2 118 CD2 -0.073 REMARK 500 HIS 2 195 NE2 HIS 2 195 CD2 -0.067 REMARK 500 HIS 2 224 NE2 HIS 2 224 CD2 -0.070 REMARK 500 HIS 3 77 NE2 HIS 3 77 CD2 -0.070 REMARK 500 HIS 3 97 NE2 HIS 3 97 CD2 -0.074 REMARK 500 GLU 3 102 CB GLU 3 102 CG 0.157 REMARK 500 GLU 3 102 CD GLU 3 102 OE2 0.069 REMARK 500 HIS 3 109 NE2 HIS 3 109 CD2 -0.076 REMARK 500 HIS 3 153 NE2 HIS 3 153 CD2 -0.073 REMARK 500 HIS 3 230 NE2 HIS 3 230 CD2 -0.076 REMARK 500 ALA 7 24 C SER 7 25 N -0.413 REMARK 500 VAL 7 51 C ARG 7 52 N -0.350 REMARK 500 SER 7 57 C ALA 7 58 N 0.297 REMARK 500 PHE 7 109 C TRP 7 110 N 0.272 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG 1 83 CG - CD - NE ANGL. DEV. = -14.1 DEGREES REMARK 500 ARG 1 83 NE - CZ - NH1 ANGL. DEV. = 9.1 DEGREES REMARK 500 ARG 1 83 NE - CZ - NH2 ANGL. DEV. = -10.3 DEGREES REMARK 500 TRP 1 108 CD1 - CG - CD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 TRP 1 108 CE2 - CD2 - CG ANGL. DEV. = -5.7 DEGREES REMARK 500 ARG 1 129 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 TRP 1 170 CD1 - CG - CD2 ANGL. DEV. = 6.3 DEGREES REMARK 500 TRP 1 170 CE2 - CD2 - CG ANGL. DEV. = -6.0 DEGREES REMARK 500 TRP 1 175 CD1 - CG - CD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 TRP 1 175 CE2 - CD2 - CG ANGL. DEV. = -6.1 DEGREES REMARK 500 ARG 1 258 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 TRP 1 269 CD1 - CG - CD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 TRP 1 269 CE2 - CD2 - CG ANGL. DEV. = -6.0 DEGREES REMARK 500 TRP 2 38 CD1 - CG - CD2 ANGL. DEV. = 6.6 DEGREES REMARK 500 TRP 2 38 CE2 - CD2 - CG ANGL. DEV. = -5.6 DEGREES REMARK 500 TRP 2 71 CD1 - CG - CD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 TRP 2 71 CE2 - CD2 - CG ANGL. DEV. = -5.7 DEGREES REMARK 500 TRP 2 78 CD1 - CG - CD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 TRP 2 78 CE2 - CD2 - CG ANGL. DEV. = -6.0 DEGREES REMARK 500 TRP 2 79 CD1 - CG - CD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 TRP 2 79 CE2 - CD2 - CG ANGL. DEV. = -5.7 DEGREES REMARK 500 TRP 2 80 CD1 - CG - CD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 TRP 2 80 CE2 - CD2 - CG ANGL. DEV. = -5.9 DEGREES REMARK 500 MET 2 141 CG - SD - CE ANGL. DEV. = -11.7 DEGREES REMARK 500 ARG 2 201 NE - CZ - NH1 ANGL. DEV. = 4.1 DEGREES REMARK 500 ARG 2 201 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 MET 2 221 CG - SD - CE ANGL. DEV. = -10.2 DEGREES REMARK 500 TRP 2 227 CD1 - CG - CD2 ANGL. DEV. = 6.4 DEGREES REMARK 500 TRP 2 227 CE2 - CD2 - CG ANGL. DEV. = -6.0 DEGREES REMARK 500 ARG 2 264 NE - CZ - NH1 ANGL. DEV. = 4.5 DEGREES REMARK 500 ARG 2 264 NE - CZ - NH2 ANGL. DEV. = -7.1 DEGREES REMARK 500 GLU 3 102 CG - CD - OE1 ANGL. DEV. = -13.0 DEGREES REMARK 500 GLU 3 102 CG - CD - OE2 ANGL. DEV. = 12.2 DEGREES REMARK 500 TRP 3 110 CD1 - CG - CD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 TRP 3 110 CE2 - CD2 - CG ANGL. DEV. = -5.4 DEGREES REMARK 500 MET 3 149 CA - CB - CG ANGL. DEV. = 16.6 DEGREES REMARK 500 TRP 3 156 CD1 - CG - CD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 TRP 3 156 CE2 - CD2 - CG ANGL. DEV. = -5.6 DEGREES REMARK 500 TRP 3 170 CD1 - CG - CD2 ANGL. DEV. = 6.4 DEGREES REMARK 500 TRP 3 170 CB - CG - CD1 ANGL. DEV. = -7.9 DEGREES REMARK 500 TRP 3 170 CE2 - CD2 - CG ANGL. DEV. = -6.3 DEGREES REMARK 500 TRP 3 170 CG - CD2 - CE3 ANGL. DEV. = 5.6 DEGREES REMARK 500 ARG 3 197 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG 4 34 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 LEU 4 61 CA - CB - CG ANGL. DEV. = 14.4 DEGREES REMARK 500 MET 4 67 CG - SD - CE ANGL. DEV. = -11.9 DEGREES REMARK 500 SER 7 7 CA - C - N ANGL. DEV. = 29.4 DEGREES REMARK 500 SER 7 7 O - C - N ANGL. DEV. = -34.7 DEGREES REMARK 500 GLY 7 8 C - N - CA ANGL. DEV. = 15.0 DEGREES REMARK 500 ALA 7 24 CA - C - N ANGL. DEV. = 15.1 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 61 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO 1 54 44.40 -80.87 REMARK 500 THR 1 145 80.18 -64.07 REMARK 500 ALA 1 232 -96.56 -93.55 REMARK 500 LEU 1 234 -46.44 -14.52 REMARK 500 CYS 1 270 85.91 57.17 REMARK 500 ASN 2 30 -162.67 60.08 REMARK 500 ASN 2 48 -67.15 -139.78 REMARK 500 ASP 2 57 -126.20 51.48 REMARK 500 CYS 2 112 97.91 -160.80 REMARK 500 ALA 2 114 -117.55 -155.84 REMARK 500 ASN 2 183 12.92 -141.08 REMARK 500 ALA 2 240 -112.12 36.08 REMARK 500 ARG 2 264 -156.31 -156.35 REMARK 500 ASN 3 18 74.89 -150.95 REMARK 500 LEU 3 57 45.42 -93.78 REMARK 500 TRP 3 170 104.94 -58.43 REMARK 500 THR 3 179 35.05 -90.88 REMARK 500 THR 3 196 -104.89 -110.08 REMARK 500 LEU 3 224 84.39 58.31 REMARK 500 ASN 4 15 63.56 -54.07 REMARK 500 ASN 4 17 43.13 -146.76 REMARK 500 ARG 4 18 26.45 -154.22 REMARK 500 ALA 4 19 -67.89 174.30 REMARK 500 TYR 4 20 -111.73 -98.25 REMARK 500 SER 4 23 78.70 -50.18 REMARK 500 THR 4 24 114.52 14.66 REMARK 500 PRO 4 56 31.93 -82.44 REMARK 500 VAL 4 60 131.23 -28.69 REMARK 500 ALA 7 24 -160.83 -120.46 REMARK 500 SER 7 25 -155.20 163.96 REMARK 500 SER 7 30 -75.39 -15.02 REMARK 500 HIS 7 31 96.85 -35.78 REMARK 500 ALA 7 40 160.40 66.75 REMARK 500 ARG 7 52 -178.27 -46.18 REMARK 500 THR 7 53 -93.71 -31.38 REMARK 500 VAL 7 56 65.33 -115.32 REMARK 500 SER 7 57 119.31 -175.88 REMARK 500 ALA 7 92 165.10 176.38 REMARK 500 THR 7 99 158.65 146.21 REMARK 500 SER 7 100 -111.06 36.25 REMARK 500 ILE 7 101 -75.24 76.22 REMARK 500 CYS 7 103 -107.25 -161.87 REMARK 500 SER 7 104 46.43 -169.33 REMARK 500 SER 7 105 -28.12 -166.46 REMARK 500 TYR 7 107 -167.46 -118.00 REMARK 500 MET 7 108 7.70 173.20 REMARK 500 PHE 7 109 85.07 -151.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER 7 57 ALA 7 58 -137.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ASP 2 11 10.07 REMARK 500 SER 7 7 26.73 REMARK 500 ALA 7 24 -31.83 REMARK 500 ARG 7 38 17.25 REMARK 500 SER 7 57 11.23 REMARK 500 CYS 7 96 16.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 TYR 7 107 24.1 L L OUTSIDE RANGE REMARK 500 PHE 7 109 23.4 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLM 1 901 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-5886 RELATED DB: EMDB REMARK 900 ASSOCIATED EM VOLUME REMARK 900 RELATED ID: EMD-5888 RELATED DB: EMDB REMARK 900 RELATED ID: 3J6A RELATED DB: PDB DBREF 3J69 1 1 302 UNP P03300 POLG_POL1M 580 881 DBREF 3J69 2 1 272 UNP P03300 POLG_POL1M 70 341 DBREF 3J69 3 1 238 UNP P03300 POLG_POL1M 342 579 DBREF 3J69 4 2 69 UNP P03300 POLG_POL1M 2 69 DBREF 3J69 7 1 126 PDB 3J69 3J69 1 126 SEQADV 3J69 SER 3 123 UNP P03300 PHE 464 CONFLICT SEQADV 3J69 MYR 4 1 UNP P03300 MYRISTOYLATION SEQRES 1 1 302 GLY LEU GLY GLN MET LEU GLU SER MET ILE ASP ASN THR SEQRES 2 1 302 VAL ARG GLU THR VAL GLY ALA ALA THR SER ARG ASP ALA SEQRES 3 1 302 LEU PRO ASN THR GLU ALA SER GLY PRO THR HIS SER LYS SEQRES 4 1 302 GLU ILE PRO ALA LEU THR ALA VAL GLU THR GLY ALA THR SEQRES 5 1 302 ASN PRO LEU VAL PRO SER ASP THR VAL GLN THR ARG HIS SEQRES 6 1 302 VAL VAL GLN HIS ARG SER ARG SER GLU SER SER ILE GLU SEQRES 7 1 302 SER PHE PHE ALA ARG GLY ALA CYS VAL THR ILE MET THR SEQRES 8 1 302 VAL ASP ASN PRO ALA SER THR THR ASN LYS ASP LYS LEU SEQRES 9 1 302 PHE ALA VAL TRP LYS ILE THR TYR LYS ASP THR VAL GLN SEQRES 10 1 302 LEU ARG ARG LYS LEU GLU PHE PHE THR TYR SER ARG PHE SEQRES 11 1 302 ASP MET GLU LEU THR PHE VAL VAL THR ALA ASN PHE THR SEQRES 12 1 302 GLU THR ASN ASN GLY HIS ALA LEU ASN GLN VAL TYR GLN SEQRES 13 1 302 ILE MET TYR VAL PRO PRO GLY ALA PRO VAL PRO GLU LYS SEQRES 14 1 302 TRP ASP ASP TYR THR TRP GLN THR SER SER ASN PRO SER SEQRES 15 1 302 ILE PHE TYR THR TYR GLY THR ALA PRO ALA ARG ILE SER SEQRES 16 1 302 VAL PRO TYR VAL GLY ILE SER ASN ALA TYR SER HIS PHE SEQRES 17 1 302 TYR ASP GLY PHE SER LYS VAL PRO LEU LYS ASP GLN SER SEQRES 18 1 302 ALA ALA LEU GLY ASP SER LEU TYR GLY ALA ALA SER LEU SEQRES 19 1 302 ASN ASP PHE GLY ILE LEU ALA VAL ARG VAL VAL ASN ASP SEQRES 20 1 302 HIS ASN PRO THR LYS VAL THR SER LYS ILE ARG VAL TYR SEQRES 21 1 302 LEU LYS PRO LYS HIS ILE ARG VAL TRP CYS PRO ARG PRO SEQRES 22 1 302 PRO ARG ALA VAL ALA TYR TYR GLY PRO GLY VAL ASP TYR SEQRES 23 1 302 LYS ASP GLY THR LEU THR PRO LEU SER THR LYS ASP LEU SEQRES 24 1 302 THR THR TYR SEQRES 1 2 272 SER PRO ASN ILE GLU ALA CYS GLY TYR SER ASP ARG VAL SEQRES 2 2 272 LEU GLN LEU THR LEU GLY ASN SER THR ILE THR THR GLN SEQRES 3 2 272 GLU ALA ALA ASN SER VAL VAL ALA TYR GLY ARG TRP PRO SEQRES 4 2 272 GLU TYR LEU ARG ASP SER GLU ALA ASN PRO VAL ASP GLN SEQRES 5 2 272 PRO THR GLU PRO ASP VAL ALA ALA CYS ARG PHE TYR THR SEQRES 6 2 272 LEU ASP THR VAL SER TRP THR LYS GLU SER ARG GLY TRP SEQRES 7 2 272 TRP TRP LYS LEU PRO ASP ALA LEU ARG ASP MET GLY LEU SEQRES 8 2 272 PHE GLY GLN ASN MET TYR TYR HIS TYR LEU GLY ARG SER SEQRES 9 2 272 GLY TYR THR VAL HIS VAL GLN CYS ASN ALA SER LYS PHE SEQRES 10 2 272 HIS GLN GLY ALA LEU GLY VAL PHE ALA VAL PRO GLU MET SEQRES 11 2 272 CYS LEU ALA GLY ASP SER ASN THR THR THR MET HIS THR SEQRES 12 2 272 SER TYR GLN ASN ALA ASN PRO GLY GLU LYS GLY GLY THR SEQRES 13 2 272 PHE THR GLY THR PHE THR PRO ASP ASN ASN GLN THR SER SEQRES 14 2 272 PRO ALA ARG ARG PHE CYS PRO VAL ASP TYR LEU LEU GLY SEQRES 15 2 272 ASN GLY THR LEU LEU GLY ASN ALA PHE VAL PHE PRO HIS SEQRES 16 2 272 GLN ILE ILE ASN LEU ARG THR ASN ASN CYS ALA THR LEU SEQRES 17 2 272 VAL LEU PRO TYR VAL ASN SER LEU SER ILE ASP SER MET SEQRES 18 2 272 VAL LYS HIS ASN ASN TRP GLY ILE ALA ILE LEU PRO LEU SEQRES 19 2 272 ALA PRO LEU ASN PHE ALA SER GLU SER SER PRO GLU ILE SEQRES 20 2 272 PRO ILE THR LEU THR ILE ALA PRO MET CYS CYS GLU PHE SEQRES 21 2 272 ASN GLY LEU ARG ASN ILE THR LEU PRO ARG LEU GLN SEQRES 1 3 238 GLY LEU PRO VAL MET ASN THR PRO GLY SER ASN GLN TYR SEQRES 2 3 238 LEU THR ALA ASP ASN PHE GLN SER PRO CYS ALA LEU PRO SEQRES 3 3 238 GLU PHE ASP VAL THR PRO PRO ILE ASP ILE PRO GLY GLU SEQRES 4 3 238 VAL LYS ASN MET MET GLU LEU ALA GLU ILE ASP THR MET SEQRES 5 3 238 ILE PRO PHE ASP LEU SER ALA THR LYS LYS ASN THR MET SEQRES 6 3 238 GLU MET TYR ARG VAL ARG LEU SER ASP LYS PRO HIS THR SEQRES 7 3 238 ASP ASP PRO ILE LEU CYS LEU SER LEU SER PRO ALA SER SEQRES 8 3 238 ASP PRO ARG LEU SER HIS THR MET LEU GLY GLU ILE LEU SEQRES 9 3 238 ASN TYR TYR THR HIS TRP ALA GLY SER LEU LYS PHE THR SEQRES 10 3 238 PHE LEU PHE CYS GLY SER MET MET ALA THR GLY LYS LEU SEQRES 11 3 238 LEU VAL SER TYR ALA PRO PRO GLY ALA ASP PRO PRO LYS SEQRES 12 3 238 LYS ARG LYS GLU ALA MET LEU GLY THR HIS VAL ILE TRP SEQRES 13 3 238 ASP ILE GLY LEU GLN SER SER CYS THR MET VAL VAL PRO SEQRES 14 3 238 TRP ILE SER ASN THR THR TYR ARG GLN THR ILE ASP ASP SEQRES 15 3 238 SER PHE THR GLU GLY GLY TYR ILE SER VAL PHE TYR GLN SEQRES 16 3 238 THR ARG ILE VAL VAL PRO LEU SER THR PRO ARG GLU MET SEQRES 17 3 238 ASP ILE LEU GLY PHE VAL SER ALA CYS ASN ASP PHE SER SEQRES 18 3 238 VAL ARG LEU LEU ARG ASP THR THR HIS ILE GLU GLN LYS SEQRES 19 3 238 ALA LEU ALA GLN SEQRES 1 4 69 MYR GLY ALA GLN VAL SER SER GLN LYS VAL GLY ALA HIS SEQRES 2 4 69 GLU ASN SER ASN ARG ALA TYR GLY GLY SER THR ILE ASN SEQRES 3 4 69 TYR THR THR ILE ASN TYR TYR ARG ASP SER ALA SER ASN SEQRES 4 4 69 ALA ALA SER LYS GLN ASP PHE SER GLN ASP PRO SER LYS SEQRES 5 4 69 PHE THR GLU PRO ILE LYS ASP VAL LEU ILE LYS THR ALA SEQRES 6 4 69 PRO MET LEU ASN SEQRES 1 7 126 GLN VAL GLN LEU GLN GLU SER GLY GLY GLY SER ALA GLN SEQRES 2 7 126 THR GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 7 126 PHE THR PHE SER HIS GLY TYR MET ALA TRP PHE ARG GLN SEQRES 4 7 126 ALA PRO GLU LYS GLU ARG GLU TRP VAL ALA CYS VAL ARG SEQRES 5 7 126 THR SER GLY VAL SER ALA TYR TYR ALA ASP SER VAL LEU SEQRES 6 7 126 GLY ARG PHE THR ILE SER GLN ASP ASN ALA LYS SER THR SEQRES 7 7 126 LEU TYR LEU GLN MET ASN ASN LEU LYS PRO GLU ASP THR SEQRES 8 7 126 ALA MET TYR TYR CYS ALA ALA THR SER ILE SER CYS SER SEQRES 9 7 126 SER GLY TYR MET PHE TRP GLY GLN GLY THR GLN VAL THR SEQRES 10 7 126 VAL SER SER HIS HIS HIS HIS HIS HIS HET MYR 4 1 15 HET PLM 1 901 18 HETNAM MYR MYRISTIC ACID HETNAM PLM PALMITIC ACID FORMUL 4 MYR C14 H28 O2 FORMUL 6 PLM C16 H32 O2 HELIX 1 1 ALA 1 46 GLY 1 50 5 5 HELIX 2 2 VAL 1 56 THR 1 60 5 5 HELIX 3 3 ARG 1 72 SER 1 75 5 4 HELIX 4 4 SER 1 76 ALA 1 82 1 7 HELIX 5 5 VAL 1 116 GLU 1 123 1 8 HELIX 6 6 ASP 1 172 THR 1 177 5 6 HELIX 7 7 SER 1 221 ASP 1 226 1 6 HELIX 8 8 TYR 2 35 ARG 2 37 5 3 HELIX 9 9 ARG 2 43 ALA 2 47 5 5 HELIX 10 10 PRO 2 56 ALA 2 60 5 5 HELIX 11 11 PRO 2 83 ARG 2 87 5 5 HELIX 12 12 MET 2 89 TYR 2 98 1 10 HELIX 13 13 SER 2 144 ASN 2 149 1 6 HELIX 14 14 PRO 2 150 GLY 2 154 5 5 HELIX 15 15 VAL 2 177 LEU 2 181 5 5 HELIX 16 16 LEU 2 186 PHE 2 193 5 8 HELIX 17 17 ASN 3 42 GLU 3 48 1 7 HELIX 18 18 THR 3 64 ARG 3 69 5 6 HELIX 19 19 THR 3 98 ASN 3 105 1 8 HELIX 20 20 LYS 3 144 MET 3 149 1 6 HELIX 21 21 ASP 4 35 ASN 4 39 5 5 HELIX 22 22 PRO 4 50 GLU 4 55 1 6 HELIX 23 23 ASN 7 74 LYS 7 76 5 3 HELIX 24 24 LYS 7 87 THR 7 91 5 5 SHEET 1 A 5 LEU 1 44 THR 1 45 0 SHEET 2 A 5 SER 3 163 VAL 3 168 -1 O SER 3 163 N THR 1 45 SHEET 3 A 5 LEU 3 114 PHE 3 120 -1 N LEU 3 114 O VAL 3 168 SHEET 4 A 5 GLU 3 207 ALA 3 216 -1 O LEU 3 211 N LEU 3 119 SHEET 5 A 5 THR 3 51 MET 3 52 -1 N THR 3 51 O VAL 3 214 SHEET 1 B 5 LEU 1 44 THR 1 45 0 SHEET 2 B 5 SER 3 163 VAL 3 168 -1 O SER 3 163 N THR 1 45 SHEET 3 B 5 LEU 3 114 PHE 3 120 -1 N LEU 3 114 O VAL 3 168 SHEET 4 B 5 GLU 3 207 ALA 3 216 -1 O LEU 3 211 N LEU 3 119 SHEET 5 B 5 VAL 3 70 SER 3 73 -1 N LEU 3 72 O MET 3 208 SHEET 1 C 4 ALA 1 85 ASN 1 94 0 SHEET 2 C 4 VAL 1 253 PRO 1 271 -1 O SER 1 255 N VAL 1 92 SHEET 3 C 4 PHE 1 125 PHE 1 142 -1 N VAL 1 137 O ARG 1 258 SHEET 4 C 4 TYR 1 205 SER 1 206 -1 O TYR 1 205 N SER 1 128 SHEET 1 D 4 ALA 1 192 VAL 1 196 0 SHEET 2 D 4 PHE 1 125 PHE 1 142 -1 N PHE 1 136 O ALA 1 192 SHEET 3 D 4 VAL 1 253 PRO 1 271 -1 O ARG 1 258 N VAL 1 137 SHEET 4 D 4 GLU 3 39 VAL 3 40 -1 O VAL 3 40 N VAL 1 268 SHEET 1 E 4 ALA 1 106 LYS 1 109 0 SHEET 2 E 4 ILE 1 239 VAL 1 244 -1 O LEU 1 240 N TRP 1 108 SHEET 3 E 4 VAL 1 154 VAL 1 160 -1 N MET 1 158 O ALA 1 241 SHEET 4 E 4 SER 1 182 THR 1 186 -1 O TYR 1 185 N TYR 1 155 SHEET 1 F 2 LEU 2 14 LEU 2 18 0 SHEET 2 F 2 SER 2 21 THR 2 25 -1 O ILE 2 23 N LEU 2 16 SHEET 1 G 5 VAL 2 32 VAL 2 33 0 SHEET 2 G 5 CYS 2 205 LEU 2 210 1 O VAL 2 209 N VAL 2 32 SHEET 3 G 5 HIS 2 99 GLN 2 111 -1 N TYR 2 106 O LEU 2 210 SHEET 4 G 5 GLU 2 246 LEU 2 263 -1 O THR 2 250 N GLN 2 111 SHEET 5 G 5 TYR 2 64 THR 2 65 -1 N TYR 2 64 O ILE 2 253 SHEET 1 H 5 VAL 2 32 VAL 2 33 0 SHEET 2 H 5 CYS 2 205 LEU 2 210 1 O VAL 2 209 N VAL 2 32 SHEET 3 H 5 HIS 2 99 GLN 2 111 -1 N TYR 2 106 O LEU 2 210 SHEET 4 H 5 GLU 2 246 LEU 2 263 -1 O THR 2 250 N GLN 2 111 SHEET 5 H 5 VAL 2 69 THR 2 72 -1 N TRP 2 71 O ILE 2 247 SHEET 1 I 5 GLY 2 155 THR 2 156 0 SHEET 2 I 5 TRP 2 78 LEU 2 82 -1 N TRP 2 79 O GLY 2 155 SHEET 3 I 5 TRP 2 227 PHE 2 239 -1 O TRP 2 227 N LEU 2 82 SHEET 4 I 5 HIS 2 118 PRO 2 128 -1 N GLY 2 123 O LEU 2 232 SHEET 5 I 5 HIS 2 195 ASN 2 199 -1 O GLN 2 196 N VAL 2 124 SHEET 1 J 4 LEU 3 83 SER 3 86 0 SHEET 2 J 4 TYR 3 189 TYR 3 194 -1 O ILE 3 190 N LEU 3 85 SHEET 3 J 4 LYS 3 129 ALA 3 135 -1 N SER 3 133 O SER 3 191 SHEET 4 J 4 THR 3 152 ASP 3 157 -1 O THR 3 152 N TYR 3 134 SHEET 1 K 3 ARG 3 177 GLN 3 178 0 SHEET 2 K 3 TYR 3 107 ALA 3 111 -1 N TRP 3 110 O ARG 3 177 SHEET 3 K 3 SER 3 221 LEU 3 225 -1 O SER 3 221 N ALA 3 111 SHEET 1 L 2 GLN 4 4 SER 4 7 0 SHEET 2 L 2 ASN 4 26 THR 4 29 -1 O THR 4 29 N GLN 4 4 SHEET 1 M 4 LEU 7 4 SER 7 7 0 SHEET 2 M 4 LEU 7 18 ALA 7 24 -1 O ALA 7 23 N GLN 7 5 SHEET 3 M 4 THR 7 78 MET 7 83 -1 O MET 7 83 N LEU 7 18 SHEET 4 M 4 PHE 7 68 ASP 7 73 -1 N THR 7 69 O GLN 7 82 SHEET 1 N 6 ALA 7 12 ALA 7 12 0 SHEET 2 N 6 THR 7 114 VAL 7 118 1 O THR 7 117 N ALA 7 12 SHEET 3 N 6 ALA 7 92 ALA 7 98 -1 N ALA 7 92 O VAL 7 116 SHEET 4 N 6 TYR 7 33 ARG 7 38 -1 N ALA 7 35 O ALA 7 97 SHEET 5 N 6 GLU 7 46 ARG 7 52 -1 O GLU 7 46 N ARG 7 38 SHEET 6 N 6 ALA 7 58 TYR 7 60 -1 O TYR 7 59 N CYS 7 50 SSBOND 1 CYS 7 22 CYS 7 96 1555 1555 2.05 LINK C1 MYR 4 1 N GLY 4 2 1555 1555 0.65 CISPEP 1 LEU 2 82 PRO 2 83 0 14.34 SITE 1 AC1 6 TYR 1 112 MET 1 132 LEU 1 134 TYR 1 159 SITE 2 AC1 6 TYR 1 205 PHE 1 237 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000