HEADER VIRUS/IMMUNE SYSTEM 21-JAN-14 3J6A OBSLTE 27-JAN-16 3J6A 3JBC TITLE ELECTRON CRYO-MICROSCOPY OF NANOBODY PVSP29F IN COMPLEX WITH TITLE 2 POLIOVIRUS P1/MAHONEY CAVEAT 3J6A RESIDUE 1 ASN 152 HAS INCORRECT STEREOCHEMISTRY AT ITS CA CAVEAT 2 3J6A CHIRAL CENTER. CAVEAT 3J6A RESIDUES 4 MYR 1 AND 4 GLY 2 ARE NOT PROPERLY LINKED. CAVEAT 3J6A RESIDUES 3 GLN 12 AND 3 TYR 13 ARE NOT PROPERLY LINKED. CAVEAT 3J6A RESIDUES 3 ASN 42 AND 3 MET 43 ARE NOT PROPERLY LINKED. COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN VP1; COMPND 3 CHAIN: 1; COMPND 4 FRAGMENT: UNP RESIDUES 580-881; COMPND 5 SYNONYM: P1D, VIRION PROTEIN 1; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: CAPSID PROTEIN VP2; COMPND 8 CHAIN: 2; COMPND 9 FRAGMENT: UNP RESIDUES 70-341; COMPND 10 SYNONYM: P1B, VIRION PROTEIN 2; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: CAPSID PROTEIN VP3; COMPND 13 CHAIN: 3; COMPND 14 FRAGMENT: UNP RESIDUES 342-579; COMPND 15 SYNONYM: P1C, VIRION PROTEIN 3; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: CAPSID PROTEIN VP4; COMPND 18 CHAIN: 4; COMPND 19 FRAGMENT: UNP RESIDUES 2-69; COMPND 20 SYNONYM: P1A, VIRION PROTEIN 4; COMPND 21 MOL_ID: 5; COMPND 22 MOLECULE: NANOBODY VHH PVSP29F; COMPND 23 CHAIN: 7; COMPND 24 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN POLIOVIRUS 1; SOURCE 3 ORGANISM_TAXID: 12081; SOURCE 4 STRAIN: MAHONEY; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: HUMAN POLIOVIRUS 1; SOURCE 7 ORGANISM_TAXID: 12081; SOURCE 8 STRAIN: MAHONEY; SOURCE 9 MOL_ID: 3; SOURCE 10 ORGANISM_SCIENTIFIC: HUMAN POLIOVIRUS 1; SOURCE 11 ORGANISM_TAXID: 12081; SOURCE 12 STRAIN: MAHONEY; SOURCE 13 MOL_ID: 4; SOURCE 14 ORGANISM_SCIENTIFIC: HUMAN POLIOVIRUS 1; SOURCE 15 ORGANISM_TAXID: 12081; SOURCE 16 STRAIN: MAHONEY; SOURCE 17 MOL_ID: 5; SOURCE 18 ORGANISM_SCIENTIFIC: CAMELUS DROMEDARIUS; SOURCE 19 ORGANISM_COMMON: DROMEDARY; SOURCE 20 ORGANISM_TAXID: 9838; SOURCE 21 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 22 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 23 EXPRESSION_SYSTEM_STRAIN: WK6; SOURCE 24 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 25 EXPRESSION_SYSTEM_PLASMID: PHEN6(C) KEYWDS PICORNAVIRUS, NANOBODY, ANTIBODY, VHH, POLIOVIRUS, MECHANISM OF KEYWDS 2 NEUTRALIZATION, VIRUS-IMMUNE SYSTEM COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR L.SCHOTTE,M.STRAUSS,B.THYS,H.HALEWYCK,D.J.FILMAN,M.BOSTINA,J.M.HOGLE, AUTHOR 2 B.ROMBAUT REVDAT 3 27-JAN-16 3J6A 1 OBSLTE REVDAT 2 09-APR-14 3J6A 1 JRNL REVDAT 1 19-FEB-14 3J6A 0 JRNL AUTH L.SCHOTTE,M.STRAUSS,B.THYS,H.HALEWYCK,D.J.FILMAN,M.BOSTINA, JRNL AUTH 2 J.M.HOGLE,B.ROMBAUT JRNL TITL MECHANISM OF ACTION AND CAPSID-STABILIZING PROPERTIES OF JRNL TITL 2 VHHS WITH AN IN VITRO ANTIPOLIOVIRAL ACTIVITY. JRNL REF J.VIROL. V. 88 4403 2014 JRNL REFN ISSN 0022-538X JRNL PMID 24501405 JRNL DOI 10.1128/JVI.03402-13 REMARK 2 REMARK 2 RESOLUTION. 6.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : REFMAC5, COOT, SPDBV REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 1HXS REMARK 3 REFINEMENT SPACE : RECIPROCAL REMARK 3 REFINEMENT PROTOCOL : RIGID BODY WITH SOME FLEXIBLE REMARK 3 LOOPS AND SIDE CHAINS REMARK 3 REFINEMENT TARGET : STEREOCHEMICALLY RESTRAINED REMARK 3 MAXIMUM LIKELIHOOD REFINEMENT OF REMARK 3 BOTH FOURIER PHASE AND AMPLITUDE REMARK 3 AGREEMENT REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : 1.681 REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : 1.681 REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 6.500 REMARK 3 NUMBER OF PARTICLES : 9764 REMARK 3 CTF CORRECTION METHOD : PER PARTICLE REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: (SINGLE PARTICLE DETAILS: PROCESSED WITH FREALIGN) REMARK 3 (SINGLE PARTICLE--APPLIED SYMMETRY: I) REMARK 4 REMARK 4 3J6A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-JAN-14. REMARK 100 THE RCSB ID CODE IS RCSB160304. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : VITREOUS ICE (CRYO EM) REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : ICOSAHEDRAL REMARK 245 NAME OF SAMPLE : NANOBODY AB29 IN COMPLEX WITH REMARK 245 POLIOVIRUS P1/MAHONEY REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : QUANTIFOIL R2/2 REMARK 245 SAMPLE VITRIFICATION DETAILS : PLUNGED INTO LIQUID ETHANE REMARK 245 SAMPLE BUFFER : PBS REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : 1 REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : 23-OCT-12 REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 1503 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN ULTRASCAN 4000 (4K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 3000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : 0.00 REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : 0.00 REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 25.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 96000 REMARK 245 CALIBRATED MAGNIFICATION : 89232 REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: 1, 2, 3, 4, 7 REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT2 2 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT3 2 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT1 3 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT2 3 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 3 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 4 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 4 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 4 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 5 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 5 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT3 5 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 7 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 7 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 7 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT1 8 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 8 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 8 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 9 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT2 9 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 9 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 10 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT2 10 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 10 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 11 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 12 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 12 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT3 12 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 13 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 13 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 13 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 14 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT2 14 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 14 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 15 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT2 15 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT3 15 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 16 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 16 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 16 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 17 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT2 17 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 17 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 18 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT2 18 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 18 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 19 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 19 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 19 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 20 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 20 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 20 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 21 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 21 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 21 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 22 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT2 22 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT3 22 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT1 23 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 23 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT3 23 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 24 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 24 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 24 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 25 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT2 25 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 25 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT1 26 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 26 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 26 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 27 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT2 27 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 27 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 28 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 28 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 28 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 29 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 29 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT3 29 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 30 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT2 30 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT3 30 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 31 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 31 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 31 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 32 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 32 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 32 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT1 33 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 33 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 33 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 34 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 34 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT3 34 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 35 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 35 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT3 35 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT1 36 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 36 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 36 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 37 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 37 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT3 37 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 38 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 38 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT3 38 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 39 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 39 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 39 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 40 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 40 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 40 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 41 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 41 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 41 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 42 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT2 42 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT3 42 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT1 43 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 43 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 43 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT1 44 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 44 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 44 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 45 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT2 45 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT3 45 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 46 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 46 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 46 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 47 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 47 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT3 47 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 48 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 48 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 48 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 49 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 49 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 49 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT1 50 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 50 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT3 50 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT1 51 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 51 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 51 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 52 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT2 52 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 52 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 53 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 53 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 53 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 54 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 54 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 54 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT1 55 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT2 55 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 55 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT1 56 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 56 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 56 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 57 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 57 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 57 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT1 58 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 58 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 58 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT1 59 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 59 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 59 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 60 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 60 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 60 0.309017 0.809017 -0.500000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY 1 1 REMARK 465 LEU 1 2 REMARK 465 GLY 1 3 REMARK 465 GLN 1 4 REMARK 465 MET 1 5 REMARK 465 LEU 1 6 REMARK 465 GLU 1 7 REMARK 465 SER 1 8 REMARK 465 MET 1 9 REMARK 465 ILE 1 10 REMARK 465 ASP 1 11 REMARK 465 ASN 1 12 REMARK 465 THR 1 13 REMARK 465 VAL 1 14 REMARK 465 ARG 1 15 REMARK 465 GLU 1 16 REMARK 465 THR 1 17 REMARK 465 VAL 1 18 REMARK 465 GLY 1 19 REMARK 465 SER 2 1 REMARK 465 PRO 2 2 REMARK 465 ASN 2 3 REMARK 465 ILE 2 4 REMARK 465 GLU 2 5 REMARK 465 LEU 3 236 REMARK 465 ALA 3 237 REMARK 465 GLN 3 238 REMARK 465 HIS 7 130 REMARK 465 HIS 7 131 REMARK 465 HIS 7 132 REMARK 465 HIS 7 133 REMARK 465 HIS 7 134 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CA GLY 7 99 N GLN 7 100 1.60 REMARK 500 OD1 ASP 3 182 N SER 3 183 1.77 REMARK 500 O ALA 1 85 O VAL 1 259 1.83 REMARK 500 O ALA 7 108 N GLY 7 110 1.85 REMARK 500 O LEU 2 200 N THR 2 202 1.87 REMARK 500 O LEU 7 103 OE1 GLN 7 107 1.89 REMARK 500 O SER 1 221 N ALA 1 223 1.90 REMARK 500 O ALA 2 60 OH TYR 2 64 1.96 REMARK 500 O SER 2 220 N VAL 2 222 1.97 REMARK 500 OH TYR 1 198 O SER 1 202 1.99 REMARK 500 CD1 PHE 1 136 O ALA 1 192 2.00 REMARK 500 O ASP 2 84 N LEU 2 86 2.01 REMARK 500 N LEU 3 72 O MET 3 208 2.01 REMARK 500 OG SER 1 195 O PRO 3 22 2.04 REMARK 500 OD1 ASP 7 73 N THR 7 78 2.04 REMARK 500 O LYS 7 87 O VAL 7 126 2.05 REMARK 500 O GLN 7 100 OG1 THR 7 104 2.06 REMARK 500 O PHE 3 116 N MET 3 166 2.06 REMARK 500 O GLY 2 151 N GLY 2 154 2.07 REMARK 500 O LEU 7 18 O LEU 7 81 2.08 REMARK 500 O LYS 3 61 OG1 THR 3 64 2.09 REMARK 500 O CYS 3 217 N ASP 3 219 2.09 REMARK 500 ND2 ASN 2 147 O ARG 2 172 2.09 REMARK 500 O SER 2 115 N PHE 2 117 2.10 REMARK 500 O THR 7 28 N SER 7 30 2.10 REMARK 500 O GLY 7 50 CA ALA 7 58 2.10 REMARK 500 OD1 ASN 1 203 O PRO 3 32 2.10 REMARK 500 O ASP 3 79 O LYS 3 143 2.12 REMARK 500 N TRP 3 110 O ARG 3 177 2.12 REMARK 500 CD1 TRP 1 269 O ILE 3 36 2.12 REMARK 500 O GLY 2 188 CD2 PHE 2 191 2.15 REMARK 500 O ASP 2 57 N ALA 2 59 2.16 REMARK 500 O THR 3 127 N VAL 3 199 2.16 REMARK 500 O LYS 1 169 N ASP 1 171 2.16 REMARK 500 O SER 1 202 N ALA 1 204 2.16 REMARK 500 OG SER 2 115 CE1 HIS 2 118 2.17 REMARK 500 O ALA 1 21 N SER 4 47 2.18 REMARK 500 O SER 1 71 N SER 1 73 2.19 REMARK 500 N LYS 3 129 OG1 THR 3 196 2.19 REMARK 500 CD PRO 2 56 O CYS 2 258 2.19 REMARK 500 O ASN 2 261 N LEU 2 263 2.19 REMARK 500 O SER 2 220 N LYS 2 223 2.19 REMARK 500 O THR 1 45 OG SER 3 162 2.19 REMARK 500 N PHE 3 55 O MET 3 67 2.19 REMARK 500 OG1 THR 1 22 OD1 ASP 1 25 2.19 REMARK 500 CG2 THR 2 162 SG CYS 2 175 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 THR 2 17 N THR 2 17 CA 0.166 REMARK 500 TYR 7 115 CG TYR 7 115 CD1 0.089 REMARK 500 TYR 7 115 CE1 TYR 7 115 CZ -0.095 REMARK 500 TYR 7 115 CZ TYR 7 115 CE2 -0.082 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO 1 95 C - N - CA ANGL. DEV. = 10.1 DEGREES REMARK 500 LYS 1 113 N - CA - C ANGL. DEV. = 19.9 DEGREES REMARK 500 LEU 1 134 N - CA - C ANGL. DEV. = 18.9 DEGREES REMARK 500 ASN 1 141 OD1 - CG - ND2 ANGL. DEV. = 16.7 DEGREES REMARK 500 ASN 1 141 CB - CG - OD1 ANGL. DEV. = -63.0 DEGREES REMARK 500 ASN 1 141 CB - CG - ND2 ANGL. DEV. = -36.7 DEGREES REMARK 500 PRO 1 167 C - N - CA ANGL. DEV. = 12.5 DEGREES REMARK 500 ALA 1 223 N - CA - C ANGL. DEV. = -16.9 DEGREES REMARK 500 PRO 1 271 C - N - CA ANGL. DEV. = 10.2 DEGREES REMARK 500 PRO 1 282 C - N - CA ANGL. DEV. = 9.7 DEGREES REMARK 500 PRO 1 293 C - N - CA ANGL. DEV. = 11.8 DEGREES REMARK 500 CYS 2 7 CA - CB - SG ANGL. DEV. = 7.3 DEGREES REMARK 500 GLN 2 15 CA - CB - CG ANGL. DEV. = 18.2 DEGREES REMARK 500 THR 2 17 N - CA - C ANGL. DEV. = 16.8 DEGREES REMARK 500 GLY 2 19 N - CA - C ANGL. DEV. = 21.5 DEGREES REMARK 500 PRO 2 53 C - N - CA ANGL. DEV. = 21.3 DEGREES REMARK 500 PRO 2 53 C - N - CD ANGL. DEV. = -17.4 DEGREES REMARK 500 GLU 2 55 CA - CB - CG ANGL. DEV. = 15.1 DEGREES REMARK 500 TRP 2 71 CB - CA - C ANGL. DEV. = 13.0 DEGREES REMARK 500 LEU 2 86 CA - CB - CG ANGL. DEV. = 16.8 DEGREES REMARK 500 TYR 2 97 CA - CB - CG ANGL. DEV. = 11.6 DEGREES REMARK 500 LEU 2 132 CA - CB - CG ANGL. DEV. = 14.1 DEGREES REMARK 500 LEU 2 186 N - CA - C ANGL. DEV. = -16.6 DEGREES REMARK 500 GLU 2 246 CA - CB - CG ANGL. DEV. = 13.8 DEGREES REMARK 500 MET 3 5 CB - CG - SD ANGL. DEV. = 20.7 DEGREES REMARK 500 LEU 3 46 N - CA - C ANGL. DEV. = -22.8 DEGREES REMARK 500 LEU 3 57 CA - CB - CG ANGL. DEV. = 18.2 DEGREES REMARK 500 THR 3 78 N - CA - C ANGL. DEV. = -16.5 DEGREES REMARK 500 SER 3 88 N - CA - C ANGL. DEV. = -21.7 DEGREES REMARK 500 PRO 3 93 C - N - CA ANGL. DEV. = 11.4 DEGREES REMARK 500 PRO 3 141 N - CA - C ANGL. DEV. = -19.7 DEGREES REMARK 500 ILE 3 171 N - CA - C ANGL. DEV. = -17.7 DEGREES REMARK 500 ARG 4 18 N - CA - C ANGL. DEV. = -24.0 DEGREES REMARK 500 LYS 4 58 CD - CE - NZ ANGL. DEV. = 15.0 DEGREES REMARK 500 LEU 7 4 CA - CB - CG ANGL. DEV. = 14.4 DEGREES REMARK 500 CYS 7 22 CA - CB - SG ANGL. DEV. = 7.0 DEGREES REMARK 500 THR 7 28 N - CA - C ANGL. DEV. = -16.2 DEGREES REMARK 500 MET 7 34 N - CA - C ANGL. DEV. = -18.4 DEGREES REMARK 500 GLN 7 39 N - CA - CB ANGL. DEV. = 11.3 DEGREES REMARK 500 PRO 7 41 C - N - CA ANGL. DEV. = 9.1 DEGREES REMARK 500 ARG 7 53 N - CA - C ANGL. DEV. = -28.9 DEGREES REMARK 500 LYS 7 87 CB - CA - C ANGL. DEV. = -12.7 DEGREES REMARK 500 GLY 7 99 CA - C - O ANGL. DEV. = 39.4 DEGREES REMARK 500 GLN 7 100 CA - CB - CG ANGL. DEV. = 13.2 DEGREES REMARK 500 GLY 7 99 CA - C - N ANGL. DEV. = -49.8 DEGREES REMARK 500 GLY 7 99 O - C - N ANGL. DEV. = -30.1 DEGREES REMARK 500 ILE 7 106 CG1 - CB - CG2 ANGL. DEV. = -14.5 DEGREES REMARK 500 TYR 7 115 CB - CG - CD2 ANGL. DEV. = 47.4 DEGREES REMARK 500 TYR 7 115 CD1 - CG - CD2 ANGL. DEV. = -25.3 DEGREES REMARK 500 TYR 7 115 CB - CG - CD1 ANGL. DEV. = -45.2 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 53 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA 1 21 116.67 -163.27 REMARK 500 THR 1 22 -166.70 -67.77 REMARK 500 GLU 1 31 -169.88 -129.03 REMARK 500 ALA 1 32 108.94 -54.85 REMARK 500 HIS 1 37 144.23 -176.19 REMARK 500 SER 1 38 -163.86 123.36 REMARK 500 LYS 1 39 18.26 -36.19 REMARK 500 PRO 1 42 -100.70 -81.60 REMARK 500 ALA 1 43 -98.47 -8.29 REMARK 500 THR 1 45 -153.94 -159.05 REMARK 500 VAL 1 47 -34.86 -144.52 REMARK 500 ALA 1 51 88.60 176.38 REMARK 500 THR 1 52 99.19 -63.17 REMARK 500 PRO 1 54 74.03 -103.29 REMARK 500 VAL 1 56 -171.17 -69.25 REMARK 500 SER 1 58 -15.94 -34.76 REMARK 500 THR 1 60 -88.35 -101.86 REMARK 500 GLN 1 62 66.87 -108.54 REMARK 500 THR 1 63 -155.89 -57.85 REMARK 500 ARG 1 72 42.21 -60.86 REMARK 500 SER 1 73 -72.73 -53.46 REMARK 500 SER 1 75 -64.06 178.55 REMARK 500 SER 1 76 136.71 -12.45 REMARK 500 GLU 1 78 -74.70 -68.45 REMARK 500 PHE 1 80 16.35 -57.30 REMARK 500 PHE 1 81 -21.02 -147.95 REMARK 500 ALA 1 82 79.86 -55.97 REMARK 500 VAL 1 87 -106.18 9.89 REMARK 500 ILE 1 89 45.64 -102.81 REMARK 500 MET 1 90 153.36 -29.42 REMARK 500 PRO 1 95 -154.32 -84.07 REMARK 500 SER 1 97 -60.43 7.75 REMARK 500 ASP 1 102 111.25 -29.08 REMARK 500 LYS 1 103 114.60 -8.55 REMARK 500 LEU 1 104 91.71 -61.82 REMARK 500 LYS 1 113 42.84 -75.44 REMARK 500 THR 1 115 161.64 148.10 REMARK 500 VAL 1 116 -96.14 -107.08 REMARK 500 GLN 1 117 -95.03 42.26 REMARK 500 PHE 1 125 -155.90 -89.21 REMARK 500 THR 1 126 -30.10 -144.22 REMARK 500 PHE 1 130 139.16 151.68 REMARK 500 LEU 1 134 -157.45 -124.74 REMARK 500 PHE 1 136 57.68 -153.04 REMARK 500 THR 1 139 -157.50 -128.36 REMARK 500 ALA 1 140 -144.86 162.01 REMARK 500 ASN 1 141 155.15 138.68 REMARK 500 THR 1 145 65.66 -56.54 REMARK 500 ASN 1 146 -133.97 -92.73 REMARK 500 ASN 1 147 6.84 -158.59 REMARK 500 REMARK 500 THIS ENTRY HAS 311 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 GLU 1 31 23.2 L L OUTSIDE RANGE REMARK 500 SER 1 38 21.3 L L OUTSIDE RANGE REMARK 500 PRO 1 42 45.4 L L OUTSIDE RANGE REMARK 500 THR 1 52 21.8 L L OUTSIDE RANGE REMARK 500 ILE 1 110 23.5 L L OUTSIDE RANGE REMARK 500 LYS 1 113 11.6 L L OUTSIDE RANGE REMARK 500 GLU 1 123 18.1 L L OUTSIDE RANGE REMARK 500 LEU 1 134 22.4 L L OUTSIDE RANGE REMARK 500 HIS 1 149 15.1 L L OUTSIDE RANGE REMARK 500 ASN 1 152 2.3 L L EXPECTING SP3 REMARK 500 THR 1 177 24.2 L L OUTSIDE RANGE REMARK 500 ASP 1 236 20.9 L L OUTSIDE RANGE REMARK 500 HIS 1 248 22.2 L L OUTSIDE RANGE REMARK 500 TRP 1 269 24.8 L L OUTSIDE RANGE REMARK 500 CYS 1 270 21.6 L L OUTSIDE RANGE REMARK 500 TYR 2 9 15.8 L L OUTSIDE RANGE REMARK 500 LEU 2 14 24.1 L L OUTSIDE RANGE REMARK 500 LEU 2 16 24.1 L L OUTSIDE RANGE REMARK 500 THR 2 17 18.4 L L OUTSIDE RANGE REMARK 500 ALA 2 28 24.6 L L OUTSIDE RANGE REMARK 500 ARG 2 43 23.1 L L OUTSIDE RANGE REMARK 500 CYS 2 61 20.6 L L OUTSIDE RANGE REMARK 500 LEU 2 66 22.2 L L OUTSIDE RANGE REMARK 500 ARG 2 76 24.8 L L OUTSIDE RANGE REMARK 500 ARG 2 87 22.6 L L OUTSIDE RANGE REMARK 500 TYR 2 100 22.9 L L OUTSIDE RANGE REMARK 500 LEU 2 132 23.9 L L OUTSIDE RANGE REMARK 500 ASP 2 135 23.3 L L OUTSIDE RANGE REMARK 500 PHE 2 161 23.9 L L OUTSIDE RANGE REMARK 500 CYS 2 258 24.7 L L OUTSIDE RANGE REMARK 500 LEU 2 268 20.9 L L OUTSIDE RANGE REMARK 500 LEU 3 46 46.3 L L OUTSIDE RANGE REMARK 500 ILE 3 53 25.0 L L OUTSIDE RANGE REMARK 500 HIS 3 77 24.6 L L OUTSIDE RANGE REMARK 500 LEU 3 114 25.0 L L OUTSIDE RANGE REMARK 500 PRO 3 141 48.5 L L OUTSIDE RANGE REMARK 500 LYS 3 143 25.0 L L OUTSIDE RANGE REMARK 500 SER 3 162 21.6 L L OUTSIDE RANGE REMARK 500 ARG 3 177 22.9 L L OUTSIDE RANGE REMARK 500 ARG 3 206 18.7 L L OUTSIDE RANGE REMARK 500 ILE 3 210 22.5 L L OUTSIDE RANGE REMARK 500 ARG 4 18 45.9 L L OUTSIDE RANGE REMARK 500 ALA 4 19 22.6 L L OUTSIDE RANGE REMARK 500 LYS 4 52 23.6 L L OUTSIDE RANGE REMARK 500 LEU 7 4 23.0 L L OUTSIDE RANGE REMARK 500 SER 7 30 21.7 L L OUTSIDE RANGE REMARK 500 ALA 7 97 23.5 L L OUTSIDE RANGE REMARK 500 GLN 7 100 22.7 L L OUTSIDE RANGE REMARK 500 GLN 7 120 18.6 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLM 1 901 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-5888 RELATED DB: EMDB REMARK 900 ASSOCIATED EM VOLUME REMARK 900 RELATED ID: EMD-5886 RELATED DB: EMDB REMARK 900 RELATED ID: 3J69 RELATED DB: PDB DBREF 3J6A 1 1 302 UNP P03300 POLG_POL1M 580 881 DBREF 3J6A 2 1 272 UNP P03300 POLG_POL1M 70 341 DBREF 3J6A 3 1 238 UNP P03300 POLG_POL1M 342 579 DBREF 3J6A 4 2 69 UNP P03300 POLG_POL1M 2 69 DBREF 3J6A 7 1 134 PDB 3J6A 3J6A 1 134 SEQADV 3J6A SER 3 123 UNP P03300 PHE 464 CONFLICT SEQADV 3J6A MYR 4 1 UNP P03300 MYRISTOYLATION SEQRES 1 1 302 GLY LEU GLY GLN MET LEU GLU SER MET ILE ASP ASN THR SEQRES 2 1 302 VAL ARG GLU THR VAL GLY ALA ALA THR SER ARG ASP ALA SEQRES 3 1 302 LEU PRO ASN THR GLU ALA SER GLY PRO THR HIS SER LYS SEQRES 4 1 302 GLU ILE PRO ALA LEU THR ALA VAL GLU THR GLY ALA THR SEQRES 5 1 302 ASN PRO LEU VAL PRO SER ASP THR VAL GLN THR ARG HIS SEQRES 6 1 302 VAL VAL GLN HIS ARG SER ARG SER GLU SER SER ILE GLU SEQRES 7 1 302 SER PHE PHE ALA ARG GLY ALA CYS VAL THR ILE MET THR SEQRES 8 1 302 VAL ASP ASN PRO ALA SER THR THR ASN LYS ASP LYS LEU SEQRES 9 1 302 PHE ALA VAL TRP LYS ILE THR TYR LYS ASP THR VAL GLN SEQRES 10 1 302 LEU ARG ARG LYS LEU GLU PHE PHE THR TYR SER ARG PHE SEQRES 11 1 302 ASP MET GLU LEU THR PHE VAL VAL THR ALA ASN PHE THR SEQRES 12 1 302 GLU THR ASN ASN GLY HIS ALA LEU ASN GLN VAL TYR GLN SEQRES 13 1 302 ILE MET TYR VAL PRO PRO GLY ALA PRO VAL PRO GLU LYS SEQRES 14 1 302 TRP ASP ASP TYR THR TRP GLN THR SER SER ASN PRO SER SEQRES 15 1 302 ILE PHE TYR THR TYR GLY THR ALA PRO ALA ARG ILE SER SEQRES 16 1 302 VAL PRO TYR VAL GLY ILE SER ASN ALA TYR SER HIS PHE SEQRES 17 1 302 TYR ASP GLY PHE SER LYS VAL PRO LEU LYS ASP GLN SER SEQRES 18 1 302 ALA ALA LEU GLY ASP SER LEU TYR GLY ALA ALA SER LEU SEQRES 19 1 302 ASN ASP PHE GLY ILE LEU ALA VAL ARG VAL VAL ASN ASP SEQRES 20 1 302 HIS ASN PRO THR LYS VAL THR SER LYS ILE ARG VAL TYR SEQRES 21 1 302 LEU LYS PRO LYS HIS ILE ARG VAL TRP CYS PRO ARG PRO SEQRES 22 1 302 PRO ARG ALA VAL ALA TYR TYR GLY PRO GLY VAL ASP TYR SEQRES 23 1 302 LYS ASP GLY THR LEU THR PRO LEU SER THR LYS ASP LEU SEQRES 24 1 302 THR THR TYR SEQRES 1 2 272 SER PRO ASN ILE GLU ALA CYS GLY TYR SER ASP ARG VAL SEQRES 2 2 272 LEU GLN LEU THR LEU GLY ASN SER THR ILE THR THR GLN SEQRES 3 2 272 GLU ALA ALA ASN SER VAL VAL ALA TYR GLY ARG TRP PRO SEQRES 4 2 272 GLU TYR LEU ARG ASP SER GLU ALA ASN PRO VAL ASP GLN SEQRES 5 2 272 PRO THR GLU PRO ASP VAL ALA ALA CYS ARG PHE TYR THR SEQRES 6 2 272 LEU ASP THR VAL SER TRP THR LYS GLU SER ARG GLY TRP SEQRES 7 2 272 TRP TRP LYS LEU PRO ASP ALA LEU ARG ASP MET GLY LEU SEQRES 8 2 272 PHE GLY GLN ASN MET TYR TYR HIS TYR LEU GLY ARG SER SEQRES 9 2 272 GLY TYR THR VAL HIS VAL GLN CYS ASN ALA SER LYS PHE SEQRES 10 2 272 HIS GLN GLY ALA LEU GLY VAL PHE ALA VAL PRO GLU MET SEQRES 11 2 272 CYS LEU ALA GLY ASP SER ASN THR THR THR MET HIS THR SEQRES 12 2 272 SER TYR GLN ASN ALA ASN PRO GLY GLU LYS GLY GLY THR SEQRES 13 2 272 PHE THR GLY THR PHE THR PRO ASP ASN ASN GLN THR SER SEQRES 14 2 272 PRO ALA ARG ARG PHE CYS PRO VAL ASP TYR LEU LEU GLY SEQRES 15 2 272 ASN GLY THR LEU LEU GLY ASN ALA PHE VAL PHE PRO HIS SEQRES 16 2 272 GLN ILE ILE ASN LEU ARG THR ASN ASN CYS ALA THR LEU SEQRES 17 2 272 VAL LEU PRO TYR VAL ASN SER LEU SER ILE ASP SER MET SEQRES 18 2 272 VAL LYS HIS ASN ASN TRP GLY ILE ALA ILE LEU PRO LEU SEQRES 19 2 272 ALA PRO LEU ASN PHE ALA SER GLU SER SER PRO GLU ILE SEQRES 20 2 272 PRO ILE THR LEU THR ILE ALA PRO MET CYS CYS GLU PHE SEQRES 21 2 272 ASN GLY LEU ARG ASN ILE THR LEU PRO ARG LEU GLN SEQRES 1 3 238 GLY LEU PRO VAL MET ASN THR PRO GLY SER ASN GLN TYR SEQRES 2 3 238 LEU THR ALA ASP ASN PHE GLN SER PRO CYS ALA LEU PRO SEQRES 3 3 238 GLU PHE ASP VAL THR PRO PRO ILE ASP ILE PRO GLY GLU SEQRES 4 3 238 VAL LYS ASN MET MET GLU LEU ALA GLU ILE ASP THR MET SEQRES 5 3 238 ILE PRO PHE ASP LEU SER ALA THR LYS LYS ASN THR MET SEQRES 6 3 238 GLU MET TYR ARG VAL ARG LEU SER ASP LYS PRO HIS THR SEQRES 7 3 238 ASP ASP PRO ILE LEU CYS LEU SER LEU SER PRO ALA SER SEQRES 8 3 238 ASP PRO ARG LEU SER HIS THR MET LEU GLY GLU ILE LEU SEQRES 9 3 238 ASN TYR TYR THR HIS TRP ALA GLY SER LEU LYS PHE THR SEQRES 10 3 238 PHE LEU PHE CYS GLY SER MET MET ALA THR GLY LYS LEU SEQRES 11 3 238 LEU VAL SER TYR ALA PRO PRO GLY ALA ASP PRO PRO LYS SEQRES 12 3 238 LYS ARG LYS GLU ALA MET LEU GLY THR HIS VAL ILE TRP SEQRES 13 3 238 ASP ILE GLY LEU GLN SER SER CYS THR MET VAL VAL PRO SEQRES 14 3 238 TRP ILE SER ASN THR THR TYR ARG GLN THR ILE ASP ASP SEQRES 15 3 238 SER PHE THR GLU GLY GLY TYR ILE SER VAL PHE TYR GLN SEQRES 16 3 238 THR ARG ILE VAL VAL PRO LEU SER THR PRO ARG GLU MET SEQRES 17 3 238 ASP ILE LEU GLY PHE VAL SER ALA CYS ASN ASP PHE SER SEQRES 18 3 238 VAL ARG LEU LEU ARG ASP THR THR HIS ILE GLU GLN LYS SEQRES 19 3 238 ALA LEU ALA GLN SEQRES 1 4 69 MYR GLY ALA GLN VAL SER SER GLN LYS VAL GLY ALA HIS SEQRES 2 4 69 GLU ASN SER ASN ARG ALA TYR GLY GLY SER THR ILE ASN SEQRES 3 4 69 TYR THR THR ILE ASN TYR TYR ARG ASP SER ALA SER ASN SEQRES 4 4 69 ALA ALA SER LYS GLN ASP PHE SER GLN ASP PRO SER LYS SEQRES 5 4 69 PHE THR GLU PRO ILE LYS ASP VAL LEU ILE LYS THR ALA SEQRES 6 4 69 PRO MET LEU ASN SEQRES 1 7 134 GLN VAL GLN LEU GLN GLU SER GLY GLY GLY SER VAL GLN SEQRES 2 7 134 THR GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLU SEQRES 3 7 134 TYR THR GLN SER SER ALA CYS MET GLY TRP PHE ARG GLN SEQRES 4 7 134 ALA PRO GLY LYS GLU ARG GLU GLY VAL ALA GLY ILE SER SEQRES 5 7 134 ARG PHE PHE GLY THR ALA TYR TYR ALA ASP SER VAL LYS SEQRES 6 7 134 GLY ARG PHE THR ILE SER GLN ASP LYS ALA LYS ASN THR SEQRES 7 7 134 VAL TYR LEU GLN MET ASN SER LEU LYS PRO GLU ASP THR SEQRES 8 7 134 ALA ILE TYR TYR CYS ALA ALA GLY GLN GLY CYS LEU THR SEQRES 9 7 134 THR ILE GLN ALA LEU GLY GLY ALA TYR GLY TYR ASN ALA SEQRES 10 7 134 TRP GLY GLN GLY THR GLN VAL THR VAL SER SER HIS HIS SEQRES 11 7 134 HIS HIS HIS HIS HET MYR 4 1 15 HET PLM 1 901 18 HETNAM MYR MYRISTIC ACID HETNAM PLM PALMITIC ACID FORMUL 4 MYR C14 H28 O2 FORMUL 6 PLM C16 H32 O2 HELIX 1 1 GLU 1 78 ALA 1 82 5 5 HELIX 2 2 GLN 1 117 GLU 1 123 1 7 HELIX 3 3 VAL 2 33 ARG 2 37 5 5 HELIX 4 4 LEU 2 91 MET 2 96 1 6 HELIX 5 5 SER 2 144 ASN 2 149 1 6 HELIX 6 6 PRO 2 150 GLY 2 154 5 5 HELIX 7 7 GLY 2 188 PHE 2 193 5 6 HELIX 8 8 MET 3 44 GLU 3 48 1 5 HELIX 9 9 THR 3 64 TYR 3 68 5 5 HELIX 10 10 ASP 3 92 SER 3 96 5 5 HELIX 11 11 THR 3 98 LEU 3 104 1 7 HELIX 12 12 ARG 3 145 LEU 3 150 1 6 HELIX 13 13 PRO 4 50 GLU 4 55 1 6 HELIX 14 14 CYS 7 102 ALA 7 108 1 7 SHEET 1 A 2 LEU 1 44 THR 1 45 0 SHEET 2 A 2 SER 3 163 CYS 3 164 -1 O SER 3 163 N THR 1 45 SHEET 1 B 2 TYR 1 127 ARG 1 129 0 SHEET 2 B 2 ARG 1 267 TRP 1 269 -1 O TRP 1 269 N TYR 1 127 SHEET 1 C 3 SER 1 195 VAL 1 196 0 SHEET 2 C 3 MET 1 132 GLU 1 133 -1 N MET 1 132 O VAL 1 196 SHEET 3 C 3 LYS 1 262 PRO 1 263 -1 O LYS 1 262 N GLU 1 133 SHEET 1 D 2 VAL 1 154 TYR 1 155 0 SHEET 2 D 2 TYR 1 185 THR 1 186 -1 O TYR 1 185 N TYR 1 155 SHEET 1 E 3 VAL 2 69 TRP 2 71 0 SHEET 2 E 3 ILE 2 247 LEU 2 251 -1 O ILE 2 247 N TRP 2 71 SHEET 3 E 3 VAL 2 110 GLN 2 111 -1 N GLN 2 111 O THR 2 250 SHEET 1 F 3 TRP 2 79 TRP 2 80 0 SHEET 2 F 3 ILE 2 229 LEU 2 234 -1 O ILE 2 229 N TRP 2 80 SHEET 3 F 3 LEU 2 122 PHE 2 125 -1 N GLY 2 123 O LEU 2 232 SHEET 1 G 2 LEU 2 180 LEU 2 181 0 SHEET 2 G 2 THR 2 185 LEU 2 186 -1 O THR 2 185 N LEU 2 181 SHEET 1 H 2 HIS 3 109 TRP 3 110 0 SHEET 2 H 2 ARG 3 177 GLN 3 178 -1 O ARG 3 177 N TRP 3 110 SHEET 1 I 3 MET 3 166 VAL 3 168 0 SHEET 2 I 3 LEU 3 114 PHE 3 116 -1 N PHE 3 116 O MET 3 166 SHEET 3 I 3 SER 3 215 ALA 3 216 -1 O SER 3 215 N LYS 3 115 SHEET 1 J 3 HIS 3 153 ASP 3 157 0 SHEET 2 J 3 LYS 3 129 ALA 3 135 -1 N LEU 3 130 O TRP 3 156 SHEET 3 J 3 TYR 3 189 TYR 3 194 -1 O SER 3 191 N SER 3 133 SHEET 1 K 4 GLU 7 6 SER 7 7 0 SHEET 2 K 4 LEU 7 18 CYS 7 22 -1 O SER 7 21 N SER 7 7 SHEET 3 K 4 LEU 7 81 MET 7 83 -1 O MET 7 83 N LEU 7 18 SHEET 4 K 4 PHE 7 68 ILE 7 70 -1 N THR 7 69 O GLN 7 82 SSBOND 1 CYS 2 61 CYS 2 258 1555 1555 2.05 SSBOND 2 CYS 7 22 CYS 7 96 1555 1555 2.02 LINK C1 MYR 4 1 N GLY 4 2 1555 1555 5.03 CISPEP 1 LEU 2 82 PRO 2 83 0 -0.47 SITE 1 AC1 8 ILE 1 110 TYR 1 112 LEU 1 122 TYR 1 159 SITE 2 AC1 8 ILE 1 194 VAL 1 196 VAL 1 199 HIS 1 207 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000