data_3J6L # _entry.id 3J6L # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.296 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3J6L RCSB RCSB160315 WWPDB D_1000160315 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details EMDB EMD-5927 'associated EM volume' . EMDB EMD-5928 'other EM volume' . PDB 3J6M unspecified . PDB 3J6N unspecified . PDB 3J6O unspecified . # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3J6L _pdbx_database_status.recvd_initial_deposition_date 2014-03-19 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Organtini, L.J.' 1 'Makhov, A.M.' 2 'Conway, J.F.' 3 'Hafenstein, S.' 4 'Carson, S.D.' 5 # _citation.id primary _citation.title 'Kinetic and structural analysis of coxsackievirus b3 receptor interactions and formation of the a-particle.' _citation.journal_abbrev J.Virol. _citation.journal_volume 88 _citation.page_first 5755 _citation.page_last 5765 _citation.year 2014 _citation.journal_id_ASTM JOVIAM _citation.country US _citation.journal_id_ISSN 0022-538X _citation.journal_id_CSD 0825 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24623425 _citation.pdbx_database_id_DOI 10.1128/JVI.00299-14 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Organtini, L.J.' 1 primary 'Makhov, A.M.' 2 primary 'Conway, J.F.' 3 primary 'Hafenstein, S.' 4 primary 'Carson, S.D.' 5 # _cell.entry_id 3J6L _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3J6L _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Coxsackievirus and adenovirus receptor' 14048.972 1 ? ? 'UNP residues 15-140' ? 2 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 3 water nat water 18.015 117 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'CAR, hCAR, CVB3-binding protein, Coxsackievirus B-adenovirus receptor, HCVADR' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;DFARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFT SNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLVK ; _entity_poly.pdbx_seq_one_letter_code_can ;DFARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFT SNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLVK ; _entity_poly.pdbx_strand_id B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 PHE n 1 3 ALA n 1 4 ARG n 1 5 SER n 1 6 LEU n 1 7 SER n 1 8 ILE n 1 9 THR n 1 10 THR n 1 11 PRO n 1 12 GLU n 1 13 GLU n 1 14 MET n 1 15 ILE n 1 16 GLU n 1 17 LYS n 1 18 ALA n 1 19 LYS n 1 20 GLY n 1 21 GLU n 1 22 THR n 1 23 ALA n 1 24 TYR n 1 25 LEU n 1 26 PRO n 1 27 CYS n 1 28 LYS n 1 29 PHE n 1 30 THR n 1 31 LEU n 1 32 SER n 1 33 PRO n 1 34 GLU n 1 35 ASP n 1 36 GLN n 1 37 GLY n 1 38 PRO n 1 39 LEU n 1 40 ASP n 1 41 ILE n 1 42 GLU n 1 43 TRP n 1 44 LEU n 1 45 ILE n 1 46 SER n 1 47 PRO n 1 48 ALA n 1 49 ASP n 1 50 ASN n 1 51 GLN n 1 52 LYS n 1 53 VAL n 1 54 ASP n 1 55 GLN n 1 56 VAL n 1 57 ILE n 1 58 ILE n 1 59 LEU n 1 60 TYR n 1 61 SER n 1 62 GLY n 1 63 ASP n 1 64 LYS n 1 65 ILE n 1 66 TYR n 1 67 ASP n 1 68 ASP n 1 69 TYR n 1 70 TYR n 1 71 PRO n 1 72 ASP n 1 73 LEU n 1 74 LYS n 1 75 GLY n 1 76 ARG n 1 77 VAL n 1 78 HIS n 1 79 PHE n 1 80 THR n 1 81 SER n 1 82 ASN n 1 83 ASP n 1 84 LEU n 1 85 LYS n 1 86 SER n 1 87 GLY n 1 88 ASP n 1 89 ALA n 1 90 SER n 1 91 ILE n 1 92 ASN n 1 93 VAL n 1 94 THR n 1 95 ASN n 1 96 LEU n 1 97 GLN n 1 98 LEU n 1 99 SER n 1 100 ASP n 1 101 ILE n 1 102 GLY n 1 103 THR n 1 104 TYR n 1 105 GLN n 1 106 CYS n 1 107 LYS n 1 108 VAL n 1 109 LYS n 1 110 LYS n 1 111 ALA n 1 112 PRO n 1 113 GLY n 1 114 VAL n 1 115 ALA n 1 116 ASN n 1 117 LYS n 1 118 LYS n 1 119 ILE n 1 120 HIS n 1 121 LEU n 1 122 VAL n 1 123 VAL n 1 124 LEU n 1 125 VAL n 1 126 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'CXADR, CAR' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CXAR_HUMAN _struct_ref.pdbx_db_accession P78310 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DFARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFT SNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLVK ; _struct_ref.pdbx_align_begin 15 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3J6L _struct_ref_seq.pdbx_strand_id B _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 126 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P78310 _struct_ref_seq.db_align_beg 15 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 140 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 15 _struct_ref_seq.pdbx_auth_seq_align_end 140 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3J6L _exptl.method 'ELECTRON MICROSCOPY' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine_hist.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 943 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 117 _refine_hist.number_atoms_total 1070 _refine_hist.d_res_high . _refine_hist.d_res_low . # _struct.entry_id 3J6L _struct.title 'Kinetic and Structural Analysis of Coxsackievirus B3 Receptor Interactions and Formation of the A-particle' _struct.pdbx_descriptor 'Coxsackievirus and adenovirus receptor' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3J6L _struct_keywords.pdbx_keywords 'CELL ADHESION' _struct_keywords.text 'Coxsackievirus B3, CVB3, CAR, CELL ADHESION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 83 ? GLY A 87 ? ASP B 97 GLY B 101 5 ? 5 HELX_P HELX_P2 2 GLN A 97 ? ASP A 100 ? GLN B 111 ASP B 114 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 27 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 106 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 41 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 120 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.103 _struct_conn.pdbx_value_order ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ALA _struct_mon_prot_cis.label_seq_id 111 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ALA _struct_mon_prot_cis.auth_seq_id 125 _struct_mon_prot_cis.auth_asym_id B _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 112 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 126 _struct_mon_prot_cis.pdbx_auth_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 2.92 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 6 ? C ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 6 ? ILE A 8 ? LEU B 20 ILE B 22 A 2 PHE A 29 ? LEU A 31 ? PHE B 43 LEU B 45 B 1 GLU A 13 ? ALA A 18 ? GLU B 27 ALA B 32 B 2 GLY A 113 ? LEU A 124 ? GLY B 127 LEU B 138 B 3 GLY A 102 ? LYS A 110 ? GLY B 116 LYS B 124 B 4 LEU A 39 ? PRO A 47 ? LEU B 53 PRO B 61 B 5 GLN A 55 ? SER A 61 ? GLN B 69 SER B 75 B 6 LYS A 64 ? TYR A 66 ? LYS B 78 TYR B 80 C 1 ALA A 23 ? LEU A 25 ? ALA B 37 LEU B 39 C 2 ILE A 91 ? VAL A 93 ? ILE B 105 VAL B 107 C 3 VAL A 77 ? PHE A 79 ? VAL B 91 PHE B 93 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER A 7 ? N SER B 21 O THR A 30 ? O THR B 44 B 1 2 N ILE A 15 ? N ILE B 29 O HIS A 120 ? O HIS B 134 B 2 3 O ILE A 119 ? O ILE B 133 N TYR A 104 ? N TYR B 118 B 3 4 O LYS A 109 ? O LYS B 123 N ASP A 40 ? N ASP B 54 B 4 5 N ILE A 41 ? N ILE B 55 O TYR A 60 ? O TYR B 74 B 5 6 N LEU A 59 ? N LEU B 73 O TYR A 66 ? O TYR B 80 C 1 2 N LEU A 25 ? N LEU B 39 O ILE A 91 ? O ILE B 105 C 2 3 O ASN A 92 ? O ASN B 106 N HIS A 78 ? N HIS B 92 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE SO4 B 401' AC2 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE SO4 B 402' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 GLU A 13 ? GLU B 27 . ? 1_555 ? 2 AC1 5 MET A 14 ? MET B 28 . ? 1_555 ? 3 AC1 5 HOH D . ? HOH B 519 . ? 1_555 ? 4 AC1 5 HOH D . ? HOH B 520 . ? 1_555 ? 5 AC1 5 HOH D . ? HOH B 592 . ? 1_555 ? 6 AC2 2 GLU A 12 ? GLU B 26 . ? 1_555 ? 7 AC2 2 LYS A 117 ? LYS B 131 . ? 1_555 ? # _database_PDB_matrix.entry_id 3J6L _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3J6L _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 15 ? ? ? B . n A 1 2 PHE 2 16 ? ? ? B . n A 1 3 ALA 3 17 ? ? ? B . n A 1 4 ARG 4 18 ? ? ? B . n A 1 5 SER 5 19 19 SER SER B . n A 1 6 LEU 6 20 20 LEU LEU B . n A 1 7 SER 7 21 21 SER SER B . n A 1 8 ILE 8 22 22 ILE ILE B . n A 1 9 THR 9 23 23 THR THR B . n A 1 10 THR 10 24 24 THR THR B . n A 1 11 PRO 11 25 25 PRO PRO B . n A 1 12 GLU 12 26 26 GLU GLU B . n A 1 13 GLU 13 27 27 GLU GLU B . n A 1 14 MET 14 28 28 MET MET B . n A 1 15 ILE 15 29 29 ILE ILE B . n A 1 16 GLU 16 30 30 GLU GLU B . n A 1 17 LYS 17 31 31 LYS LYS B . n A 1 18 ALA 18 32 32 ALA ALA B . n A 1 19 LYS 19 33 33 LYS LYS B . n A 1 20 GLY 20 34 34 GLY GLY B . n A 1 21 GLU 21 35 35 GLU GLU B . n A 1 22 THR 22 36 36 THR THR B . n A 1 23 ALA 23 37 37 ALA ALA B . n A 1 24 TYR 24 38 38 TYR TYR B . n A 1 25 LEU 25 39 39 LEU LEU B . n A 1 26 PRO 26 40 40 PRO PRO B . n A 1 27 CYS 27 41 41 CYS CYS B . n A 1 28 LYS 28 42 42 LYS LYS B . n A 1 29 PHE 29 43 43 PHE PHE B . n A 1 30 THR 30 44 44 THR THR B . n A 1 31 LEU 31 45 45 LEU LEU B . n A 1 32 SER 32 46 46 SER SER B . n A 1 33 PRO 33 47 47 PRO PRO B . n A 1 34 GLU 34 48 48 GLU GLU B . n A 1 35 ASP 35 49 49 ASP ASP B . n A 1 36 GLN 36 50 50 GLN GLN B . n A 1 37 GLY 37 51 51 GLY GLY B . n A 1 38 PRO 38 52 52 PRO PRO B . n A 1 39 LEU 39 53 53 LEU LEU B . n A 1 40 ASP 40 54 54 ASP ASP B . n A 1 41 ILE 41 55 55 ILE ILE B . n A 1 42 GLU 42 56 56 GLU GLU B . n A 1 43 TRP 43 57 57 TRP TRP B . n A 1 44 LEU 44 58 58 LEU LEU B . n A 1 45 ILE 45 59 59 ILE ILE B . n A 1 46 SER 46 60 60 SER SER B . n A 1 47 PRO 47 61 61 PRO PRO B . n A 1 48 ALA 48 62 62 ALA ALA B . n A 1 49 ASP 49 63 63 ASP ASP B . n A 1 50 ASN 50 64 64 ASN ASN B . n A 1 51 GLN 51 65 65 GLN GLN B . n A 1 52 LYS 52 66 66 LYS LYS B . n A 1 53 VAL 53 67 67 VAL VAL B . n A 1 54 ASP 54 68 68 ASP ASP B . n A 1 55 GLN 55 69 69 GLN GLN B . n A 1 56 VAL 56 70 70 VAL VAL B . n A 1 57 ILE 57 71 71 ILE ILE B . n A 1 58 ILE 58 72 72 ILE ILE B . n A 1 59 LEU 59 73 73 LEU LEU B . n A 1 60 TYR 60 74 74 TYR TYR B . n A 1 61 SER 61 75 75 SER SER B . n A 1 62 GLY 62 76 76 GLY GLY B . n A 1 63 ASP 63 77 77 ASP ASP B . n A 1 64 LYS 64 78 78 LYS LYS B . n A 1 65 ILE 65 79 79 ILE ILE B . n A 1 66 TYR 66 80 80 TYR TYR B . n A 1 67 ASP 67 81 81 ASP ASP B . n A 1 68 ASP 68 82 82 ASP ASP B . n A 1 69 TYR 69 83 83 TYR TYR B . n A 1 70 TYR 70 84 84 TYR TYR B . n A 1 71 PRO 71 85 85 PRO PRO B . n A 1 72 ASP 72 86 86 ASP ASP B . n A 1 73 LEU 73 87 87 LEU LEU B . n A 1 74 LYS 74 88 88 LYS LYS B . n A 1 75 GLY 75 89 89 GLY GLY B . n A 1 76 ARG 76 90 90 ARG ARG B . n A 1 77 VAL 77 91 91 VAL VAL B . n A 1 78 HIS 78 92 92 HIS HIS B . n A 1 79 PHE 79 93 93 PHE PHE B . n A 1 80 THR 80 94 94 THR THR B . n A 1 81 SER 81 95 95 SER SER B . n A 1 82 ASN 82 96 96 ASN ASN B . n A 1 83 ASP 83 97 97 ASP ASP B . n A 1 84 LEU 84 98 98 LEU LEU B . n A 1 85 LYS 85 99 99 LYS LYS B . n A 1 86 SER 86 100 100 SER SER B . n A 1 87 GLY 87 101 101 GLY GLY B . n A 1 88 ASP 88 102 102 ASP ASP B . n A 1 89 ALA 89 103 103 ALA ALA B . n A 1 90 SER 90 104 104 SER SER B . n A 1 91 ILE 91 105 105 ILE ILE B . n A 1 92 ASN 92 106 106 ASN ASN B . n A 1 93 VAL 93 107 107 VAL VAL B . n A 1 94 THR 94 108 108 THR THR B . n A 1 95 ASN 95 109 109 ASN ASN B . n A 1 96 LEU 96 110 110 LEU LEU B . n A 1 97 GLN 97 111 111 GLN GLN B . n A 1 98 LEU 98 112 112 LEU LEU B . n A 1 99 SER 99 113 113 SER SER B . n A 1 100 ASP 100 114 114 ASP ASP B . n A 1 101 ILE 101 115 115 ILE ILE B . n A 1 102 GLY 102 116 116 GLY GLY B . n A 1 103 THR 103 117 117 THR THR B . n A 1 104 TYR 104 118 118 TYR TYR B . n A 1 105 GLN 105 119 119 GLN GLN B . n A 1 106 CYS 106 120 120 CYS CYS B . n A 1 107 LYS 107 121 121 LYS LYS B . n A 1 108 VAL 108 122 122 VAL VAL B . n A 1 109 LYS 109 123 123 LYS LYS B . n A 1 110 LYS 110 124 124 LYS LYS B . n A 1 111 ALA 111 125 125 ALA ALA B . n A 1 112 PRO 112 126 126 PRO PRO B . n A 1 113 GLY 113 127 127 GLY GLY B . n A 1 114 VAL 114 128 128 VAL VAL B . n A 1 115 ALA 115 129 129 ALA ALA B . n A 1 116 ASN 116 130 130 ASN ASN B . n A 1 117 LYS 117 131 131 LYS LYS B . n A 1 118 LYS 118 132 132 LYS LYS B . n A 1 119 ILE 119 133 133 ILE ILE B . n A 1 120 HIS 120 134 134 HIS HIS B . n A 1 121 LEU 121 135 135 LEU LEU B . n A 1 122 VAL 122 136 136 VAL VAL B . n A 1 123 VAL 123 137 137 VAL VAL B . n A 1 124 LEU 124 138 138 LEU LEU B . n A 1 125 VAL 125 139 139 VAL VAL B . n A 1 126 LYS 126 140 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 401 401 SO4 SO4 B . C 2 SO4 1 402 403 SO4 SO4 B . D 3 HOH 1 501 404 HOH HOH B . D 3 HOH 2 502 405 HOH HOH B . D 3 HOH 3 503 406 HOH HOH B . D 3 HOH 4 504 407 HOH HOH B . D 3 HOH 5 505 408 HOH HOH B . D 3 HOH 6 506 409 HOH HOH B . D 3 HOH 7 507 410 HOH HOH B . D 3 HOH 8 508 411 HOH HOH B . D 3 HOH 9 509 412 HOH HOH B . D 3 HOH 10 510 413 HOH HOH B . D 3 HOH 11 511 414 HOH HOH B . D 3 HOH 12 512 415 HOH HOH B . D 3 HOH 13 513 416 HOH HOH B . D 3 HOH 14 514 417 HOH HOH B . D 3 HOH 15 515 418 HOH HOH B . D 3 HOH 16 516 419 HOH HOH B . D 3 HOH 17 517 420 HOH HOH B . D 3 HOH 18 518 421 HOH HOH B . D 3 HOH 19 519 422 HOH HOH B . D 3 HOH 20 520 423 HOH HOH B . D 3 HOH 21 521 424 HOH HOH B . D 3 HOH 22 522 425 HOH HOH B . D 3 HOH 23 523 426 HOH HOH B . D 3 HOH 24 524 427 HOH HOH B . D 3 HOH 25 525 428 HOH HOH B . D 3 HOH 26 526 429 HOH HOH B . D 3 HOH 27 527 430 HOH HOH B . D 3 HOH 28 528 431 HOH HOH B . D 3 HOH 29 529 432 HOH HOH B . D 3 HOH 30 530 433 HOH HOH B . D 3 HOH 31 531 434 HOH HOH B . D 3 HOH 32 532 435 HOH HOH B . D 3 HOH 33 533 436 HOH HOH B . D 3 HOH 34 534 437 HOH HOH B . D 3 HOH 35 535 438 HOH HOH B . D 3 HOH 36 536 439 HOH HOH B . D 3 HOH 37 537 440 HOH HOH B . D 3 HOH 38 538 441 HOH HOH B . D 3 HOH 39 539 442 HOH HOH B . D 3 HOH 40 540 443 HOH HOH B . D 3 HOH 41 541 444 HOH HOH B . D 3 HOH 42 542 445 HOH HOH B . D 3 HOH 43 543 446 HOH HOH B . D 3 HOH 44 544 447 HOH HOH B . D 3 HOH 45 545 448 HOH HOH B . D 3 HOH 46 546 449 HOH HOH B . D 3 HOH 47 547 450 HOH HOH B . D 3 HOH 48 548 451 HOH HOH B . D 3 HOH 49 549 452 HOH HOH B . D 3 HOH 50 550 453 HOH HOH B . D 3 HOH 51 551 454 HOH HOH B . D 3 HOH 52 552 455 HOH HOH B . D 3 HOH 53 553 456 HOH HOH B . D 3 HOH 54 554 457 HOH HOH B . D 3 HOH 55 555 458 HOH HOH B . D 3 HOH 56 556 459 HOH HOH B . D 3 HOH 57 557 460 HOH HOH B . D 3 HOH 58 558 461 HOH HOH B . D 3 HOH 59 559 462 HOH HOH B . D 3 HOH 60 560 463 HOH HOH B . D 3 HOH 61 561 464 HOH HOH B . D 3 HOH 62 562 465 HOH HOH B . D 3 HOH 63 563 466 HOH HOH B . D 3 HOH 64 564 467 HOH HOH B . D 3 HOH 65 565 468 HOH HOH B . D 3 HOH 66 566 469 HOH HOH B . D 3 HOH 67 567 470 HOH HOH B . D 3 HOH 68 568 471 HOH HOH B . D 3 HOH 69 569 472 HOH HOH B . D 3 HOH 70 570 473 HOH HOH B . D 3 HOH 71 571 474 HOH HOH B . D 3 HOH 72 572 475 HOH HOH B . D 3 HOH 73 573 476 HOH HOH B . D 3 HOH 74 574 477 HOH HOH B . D 3 HOH 75 575 478 HOH HOH B . D 3 HOH 76 576 479 HOH HOH B . D 3 HOH 77 577 480 HOH HOH B . D 3 HOH 78 578 481 HOH HOH B . D 3 HOH 79 579 482 HOH HOH B . D 3 HOH 80 580 483 HOH HOH B . D 3 HOH 81 581 484 HOH HOH B . D 3 HOH 82 582 485 HOH HOH B . D 3 HOH 83 583 486 HOH HOH B . D 3 HOH 84 584 487 HOH HOH B . D 3 HOH 85 585 488 HOH HOH B . D 3 HOH 86 586 489 HOH HOH B . D 3 HOH 87 587 490 HOH HOH B . D 3 HOH 88 588 491 HOH HOH B . D 3 HOH 89 589 492 HOH HOH B . D 3 HOH 90 590 493 HOH HOH B . D 3 HOH 91 591 494 HOH HOH B . D 3 HOH 92 592 495 HOH HOH B . D 3 HOH 93 593 496 HOH HOH B . D 3 HOH 94 594 497 HOH HOH B . D 3 HOH 95 595 498 HOH HOH B . D 3 HOH 96 596 499 HOH HOH B . D 3 HOH 97 597 500 HOH HOH B . D 3 HOH 98 598 501 HOH HOH B . D 3 HOH 99 599 502 HOH HOH B . D 3 HOH 100 600 503 HOH HOH B . D 3 HOH 101 601 504 HOH HOH B . D 3 HOH 102 602 505 HOH HOH B . D 3 HOH 103 603 506 HOH HOH B . D 3 HOH 104 604 507 HOH HOH B . D 3 HOH 105 605 508 HOH HOH B . D 3 HOH 106 606 509 HOH HOH B . D 3 HOH 107 607 510 HOH HOH B . D 3 HOH 108 608 511 HOH HOH B . D 3 HOH 109 609 512 HOH HOH B . D 3 HOH 110 610 513 HOH HOH B . D 3 HOH 111 611 514 HOH HOH B . D 3 HOH 112 612 515 HOH HOH B . D 3 HOH 113 613 516 HOH HOH B . D 3 HOH 114 614 517 HOH HOH B . D 3 HOH 115 615 518 HOH HOH B . D 3 HOH 116 616 519 HOH HOH B . D 3 HOH 117 617 520 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 'complete icosahedral assembly' ? 60-MERIC 60 2 'icosahedral asymmetric unit' ? monomeric 1 3 'icosahedral pentamer' ? pentameric 5 4 'icosahedral 23 hexamer' ? hexameric 6 5 'icosahedral asymmetric unit, std point frame' ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 '(1-60)' A,B,C,D 2 1 A,B,C,D 3 '(1-5)' A,B,C,D 4 '(1,2,6,10,23,24)' A,B,C,D 5 P A,B,C,D # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] P 'transform to point frame' ? ? 0.00000000 -1.00000000 0.00000000 0.00000 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 1 'point symmetry operation' ? ? 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 2 'point symmetry operation' ? ? 0.50000000 -0.80901699 0.30901699 0.00000 0.80901699 0.30901699 -0.50000000 0.00000 0.30901699 0.50000000 0.80901699 0.00000 3 'point symmetry operation' ? ? -0.30901699 -0.50000000 0.80901699 0.00000 0.50000000 -0.80901699 -0.30901699 0.00000 0.80901699 0.30901699 0.50000000 0.00000 4 'point symmetry operation' ? ? -0.30901699 0.50000000 0.80901699 0.00000 -0.50000000 -0.80901699 0.30901699 0.00000 0.80901699 -0.30901699 0.50000000 0.00000 5 'point symmetry operation' ? ? 0.50000000 0.80901699 0.30901699 0.00000 -0.80901699 0.30901699 0.50000000 0.00000 0.30901699 -0.50000000 0.80901699 0.00000 6 'point symmetry operation' ? ? -1.00000000 0.00000000 0.00000000 0.00000 0.00000000 -1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 7 'point symmetry operation' ? ? -0.50000000 0.80901699 -0.30901699 0.00000 -0.80901699 -0.30901699 0.50000000 0.00000 0.30901699 0.50000000 0.80901699 0.00000 8 'point symmetry operation' ? ? 0.30901699 0.50000000 -0.80901699 0.00000 -0.50000000 0.80901699 0.30901699 0.00000 0.80901699 0.30901699 0.50000000 0.00000 9 'point symmetry operation' ? ? 0.30901699 -0.50000000 -0.80901699 0.00000 0.50000000 0.80901699 -0.30901699 0.00000 0.80901699 -0.30901699 0.50000000 0.00000 10 'point symmetry operation' ? ? -0.50000000 -0.80901699 -0.30901699 0.00000 0.80901699 -0.30901699 -0.50000000 0.00000 0.30901699 -0.50000000 0.80901699 0.00000 11 'point symmetry operation' ? ? 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 -1.00000000 0.00000000 0.00000 0.00000000 0.00000000 -1.00000000 0.00000 12 'point symmetry operation' ? ? 0.50000000 -0.80901699 0.30901699 0.00000 -0.80901699 -0.30901699 0.50000000 0.00000 -0.30901699 -0.50000000 -0.80901699 0.00000 13 'point symmetry operation' ? ? -0.30901699 -0.50000000 0.80901699 0.00000 -0.50000000 0.80901699 0.30901699 0.00000 -0.80901699 -0.30901699 -0.50000000 0.00000 14 'point symmetry operation' ? ? -0.30901699 0.50000000 0.80901699 0.00000 0.50000000 0.80901699 -0.30901699 0.00000 -0.80901699 0.30901699 -0.50000000 0.00000 15 'point symmetry operation' ? ? 0.50000000 0.80901699 0.30901699 0.00000 0.80901699 -0.30901699 -0.50000000 0.00000 -0.30901699 0.50000000 -0.80901699 0.00000 16 'point symmetry operation' ? ? -1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 -1.00000000 0.00000 17 'point symmetry operation' ? ? -0.50000000 0.80901699 -0.30901699 0.00000 0.80901699 0.30901699 -0.50000000 0.00000 -0.30901699 -0.50000000 -0.80901699 0.00000 18 'point symmetry operation' ? ? 0.30901699 0.50000000 -0.80901699 0.00000 0.50000000 -0.80901699 -0.30901699 0.00000 -0.80901699 -0.30901699 -0.50000000 0.00000 19 'point symmetry operation' ? ? 0.30901699 -0.50000000 -0.80901699 0.00000 -0.50000000 -0.80901699 0.30901699 0.00000 -0.80901699 0.30901699 -0.50000000 0.00000 20 'point symmetry operation' ? ? -0.50000000 -0.80901699 -0.30901699 0.00000 -0.80901699 0.30901699 0.50000000 0.00000 -0.30901699 0.50000000 -0.80901699 0.00000 21 'point symmetry operation' ? ? 0.00000000 -1.00000000 0.00000000 0.00000 0.00000000 0.00000000 -1.00000000 0.00000 1.00000000 0.00000000 0.00000000 0.00000 22 'point symmetry operation' ? ? -0.80901699 -0.30901699 0.50000000 0.00000 -0.30901699 -0.50000000 -0.80901699 0.00000 0.50000000 -0.80901699 0.30901699 0.00000 23 'point symmetry operation' ? ? -0.50000000 0.80901699 0.30901699 0.00000 -0.80901699 -0.30901699 -0.50000000 0.00000 -0.30901699 -0.50000000 0.80901699 0.00000 24 'point symmetry operation' ? ? 0.50000000 0.80901699 -0.30901699 0.00000 -0.80901699 0.30901699 -0.50000000 0.00000 -0.30901699 0.50000000 0.80901699 0.00000 25 'point symmetry operation' ? ? 0.80901699 -0.30901699 -0.50000000 0.00000 -0.30901699 0.50000000 -0.80901699 0.00000 0.50000000 0.80901699 0.30901699 0.00000 26 'point symmetry operation' ? ? 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 -1.00000000 0.00000 -1.00000000 0.00000000 0.00000000 0.00000 27 'point symmetry operation' ? ? 0.80901699 0.30901699 -0.50000000 0.00000 -0.30901699 -0.50000000 -0.80901699 0.00000 -0.50000000 0.80901699 -0.30901699 0.00000 28 'point symmetry operation' ? ? 0.50000000 -0.80901699 -0.30901699 0.00000 -0.80901699 -0.30901699 -0.50000000 0.00000 0.30901699 0.50000000 -0.80901699 0.00000 29 'point symmetry operation' ? ? -0.50000000 -0.80901699 0.30901699 0.00000 -0.80901699 0.30901699 -0.50000000 0.00000 0.30901699 -0.50000000 -0.80901699 0.00000 30 'point symmetry operation' ? ? -0.80901699 0.30901699 0.50000000 0.00000 -0.30901699 0.50000000 -0.80901699 0.00000 -0.50000000 -0.80901699 -0.30901699 0.00000 31 'point symmetry operation' ? ? 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 1.00000000 0.00000000 0.00000000 0.00000 32 'point symmetry operation' ? ? 0.80901699 0.30901699 -0.50000000 0.00000 0.30901699 0.50000000 0.80901699 0.00000 0.50000000 -0.80901699 0.30901699 0.00000 33 'point symmetry operation' ? ? 0.50000000 -0.80901699 -0.30901699 0.00000 0.80901699 0.30901699 0.50000000 0.00000 -0.30901699 -0.50000000 0.80901699 0.00000 34 'point symmetry operation' ? ? -0.50000000 -0.80901699 0.30901699 0.00000 0.80901699 -0.30901699 0.50000000 0.00000 -0.30901699 0.50000000 0.80901699 0.00000 35 'point symmetry operation' ? ? -0.80901699 0.30901699 0.50000000 0.00000 0.30901699 -0.50000000 0.80901699 0.00000 0.50000000 0.80901699 0.30901699 0.00000 36 'point symmetry operation' ? ? 0.00000000 -1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 -1.00000000 0.00000000 0.00000000 0.00000 37 'point symmetry operation' ? ? -0.80901699 -0.30901699 0.50000000 0.00000 0.30901699 0.50000000 0.80901699 0.00000 -0.50000000 0.80901699 -0.30901699 0.00000 38 'point symmetry operation' ? ? -0.50000000 0.80901699 0.30901699 0.00000 0.80901699 0.30901699 0.50000000 0.00000 0.30901699 0.50000000 -0.80901699 0.00000 39 'point symmetry operation' ? ? 0.50000000 0.80901699 -0.30901699 0.00000 0.80901699 -0.30901699 0.50000000 0.00000 0.30901699 -0.50000000 -0.80901699 0.00000 40 'point symmetry operation' ? ? 0.80901699 -0.30901699 -0.50000000 0.00000 0.30901699 -0.50000000 0.80901699 0.00000 -0.50000000 -0.80901699 -0.30901699 0.00000 41 'point symmetry operation' ? ? 0.00000000 0.00000000 1.00000000 0.00000 -1.00000000 0.00000000 0.00000000 0.00000 0.00000000 -1.00000000 0.00000000 0.00000 42 'point symmetry operation' ? ? 0.30901699 0.50000000 0.80901699 0.00000 -0.50000000 0.80901699 -0.30901699 0.00000 -0.80901699 -0.30901699 0.50000000 0.00000 43 'point symmetry operation' ? ? 0.80901699 0.30901699 0.50000000 0.00000 0.30901699 0.50000000 -0.80901699 0.00000 -0.50000000 0.80901699 0.30901699 0.00000 44 'point symmetry operation' ? ? 0.80901699 -0.30901699 0.50000000 0.00000 0.30901699 -0.50000000 -0.80901699 0.00000 0.50000000 0.80901699 -0.30901699 0.00000 45 'point symmetry operation' ? ? 0.30901699 -0.50000000 0.80901699 0.00000 -0.50000000 -0.80901699 -0.30901699 0.00000 0.80901699 -0.30901699 -0.50000000 0.00000 46 'point symmetry operation' ? ? 0.00000000 0.00000000 1.00000000 0.00000 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 47 'point symmetry operation' ? ? 0.30901699 0.50000000 0.80901699 0.00000 0.50000000 -0.80901699 0.30901699 0.00000 0.80901699 0.30901699 -0.50000000 0.00000 48 'point symmetry operation' ? ? 0.80901699 0.30901699 0.50000000 0.00000 -0.30901699 -0.50000000 0.80901699 0.00000 0.50000000 -0.80901699 -0.30901699 0.00000 49 'point symmetry operation' ? ? 0.80901699 -0.30901699 0.50000000 0.00000 -0.30901699 0.50000000 0.80901699 0.00000 -0.50000000 -0.80901699 0.30901699 0.00000 50 'point symmetry operation' ? ? 0.30901699 -0.50000000 0.80901699 0.00000 0.50000000 0.80901699 0.30901699 0.00000 -0.80901699 0.30901699 0.50000000 0.00000 51 'point symmetry operation' ? ? 0.00000000 0.00000000 -1.00000000 0.00000 -1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 52 'point symmetry operation' ? ? -0.30901699 -0.50000000 -0.80901699 0.00000 -0.50000000 0.80901699 -0.30901699 0.00000 0.80901699 0.30901699 -0.50000000 0.00000 53 'point symmetry operation' ? ? -0.80901699 -0.30901699 -0.50000000 0.00000 0.30901699 0.50000000 -0.80901699 0.00000 0.50000000 -0.80901699 -0.30901699 0.00000 54 'point symmetry operation' ? ? -0.80901699 0.30901699 -0.50000000 0.00000 0.30901699 -0.50000000 -0.80901699 0.00000 -0.50000000 -0.80901699 0.30901699 0.00000 55 'point symmetry operation' ? ? -0.30901699 0.50000000 -0.80901699 0.00000 -0.50000000 -0.80901699 -0.30901699 0.00000 -0.80901699 0.30901699 0.50000000 0.00000 56 'point symmetry operation' ? ? 0.00000000 0.00000000 -1.00000000 0.00000 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 -1.00000000 0.00000000 0.00000 57 'point symmetry operation' ? ? -0.30901699 -0.50000000 -0.80901699 0.00000 0.50000000 -0.80901699 0.30901699 0.00000 -0.80901699 -0.30901699 0.50000000 0.00000 58 'point symmetry operation' ? ? -0.80901699 -0.30901699 -0.50000000 0.00000 -0.30901699 -0.50000000 0.80901699 0.00000 -0.50000000 0.80901699 0.30901699 0.00000 59 'point symmetry operation' ? ? -0.80901699 0.30901699 -0.50000000 0.00000 -0.30901699 0.50000000 0.80901699 0.00000 0.50000000 0.80901699 -0.30901699 0.00000 60 'point symmetry operation' ? ? -0.30901699 0.50000000 -0.80901699 0.00000 0.50000000 0.80901699 0.30901699 0.00000 0.80901699 -0.30901699 -0.50000000 0.00000 # _pdbx_point_symmetry.entry_id 3J6L _pdbx_point_symmetry.Schoenflies_symbol I # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-04-09 2 'Structure model' 1 1 2014-05-07 3 'Structure model' 1 2 2018-07-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category em_software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_em_software.image_processing_id' 2 3 'Structure model' '_em_software.name' # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 3J6L _em_3d_fitting.ref_protocol 'RIGID BODY FIT' _em_3d_fitting.ref_space REAL _em_3d_fitting.overall_b_value ? _em_3d_fitting.target_criteria 'correlation coefficient' _em_3d_fitting.details 'REFINEMENT PROTOCOL--rigid body' _em_3d_fitting.method ? # _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.id 1 _em_3d_fitting_list.pdb_entry_id 1F5W _em_3d_fitting_list.pdb_chain_id B _em_3d_fitting_list.details ? # _em_3d_reconstruction.entry_id 3J6L _em_3d_reconstruction.id 1 _em_3d_reconstruction.resolution_method 'FSC 0.5 CUT-OFF' _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.method 'Common Lines' _em_3d_reconstruction.nominal_pixel_size 1.25 _em_3d_reconstruction.actual_pixel_size 1.25 _em_3d_reconstruction.resolution 9.0 _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.details '(Single particle details: Particles were selected using EMAN) (Single particle--Applied symmetry: I)' _em_3d_reconstruction.num_particles 9302 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.algorithm ? # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name '50 mM MES, 100 mM NaCl' _em_buffer.pH 6 _em_buffer.details '50 mM MES, 100 mM NaCl' # loop_ _em_entity_assembly.id _em_entity_assembly.name _em_entity_assembly.type _em_entity_assembly.parent_id _em_entity_assembly.synonym _em_entity_assembly.details _em_entity_assembly.oligomeric_details 1 'Coxsackievirus B3 complexed with CAR' COMPLEX 0 ? 'icosahedral virus' ? 2 'Human coxsackievirus B3' VIRUS 1 ? ? ? 3 'Coxsackievirus and adenovirus receptor' ? 1 ? ? ? # _em_image_scans.entry_id 3J6L _em_image_scans.id 1 _em_image_scans.image_recording_id 1 _em_image_scans.number_digital_images 96 _em_image_scans.citation_id ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.sampling_size ? _em_image_scans.scanner_model ? _em_image_scans.details ? # _em_imaging.entry_id 3J6L _em_imaging.id 1 _em_imaging.date 2012-08-01 _em_imaging.specimen_id 1 _em_imaging.temperature ? _em_imaging.microscope_model 'FEI TECNAI F20' _em_imaging.nominal_defocus_min 1980 _em_imaging.nominal_defocus_max 3660 _em_imaging.tilt_angle_min 0.0 _em_imaging.tilt_angle_max 0.0 _em_imaging.nominal_cs 2 _em_imaging.mode 'BRIGHT FIELD' _em_imaging.illumination_mode 'SPOT SCAN' _em_imaging.nominal_magnification 50000 _em_imaging.calibrated_magnification 50000 _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.accelerating_voltage 200 _em_imaging.details ? _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'GATAN LIQUID NITROGEN' _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.detector_distance 0.0 _em_imaging.electron_beam_tilt_params ? _em_imaging.astigmatism CTFFIND3 _em_imaging.citation_id ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details 'glow-discharged holey carbon Quantifoil electron microscopy grids' _em_sample_support.film_material ? _em_sample_support.grid_material ? _em_sample_support.grid_mesh_size ? _em_sample_support.grid_type ? _em_sample_support.method ? # _em_virus_entity.id 1 _em_virus_entity.virus_host_category VERTEBRATES _em_virus_entity.entity_assembly_id 1 _em_virus_entity.virus_type VIRION _em_virus_entity.virus_isolate STRAIN _em_virus_entity.empty NO _em_virus_entity.enveloped NO _em_virus_entity.details ? # _em_vitrification.entry_id 3J6L _em_vitrification.id 1 _em_vitrification.details 'Plunged into ethane-propane (FEI VITROBOT MARK III)' _em_vitrification.cryogen_name OTHER _em_vitrification.humidity 95 _em_vitrification.temp 95 _em_vitrification.instrument 'FEI VITROBOT MARK III' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.specimen_id 1 # _em_experiment.entry_id 3J6L _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' # _em_single_particle_entity.entry_id 3J6L _em_single_particle_entity.id 1 _em_single_particle_entity.point_symmetry I _em_single_particle_entity.image_processing_id 1 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 N _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 SER _pdbx_validate_rmsd_angle.auth_seq_id_1 19 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CA _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 SER _pdbx_validate_rmsd_angle.auth_seq_id_2 19 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CB _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 SER _pdbx_validate_rmsd_angle.auth_seq_id_3 19 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 125.67 _pdbx_validate_rmsd_angle.angle_target_value 110.50 _pdbx_validate_rmsd_angle.angle_deviation 15.17 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.50 _pdbx_validate_rmsd_angle.linker_flag N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id LEU _pdbx_validate_torsion.auth_asym_id B _pdbx_validate_torsion.auth_seq_id 20 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -173.26 _pdbx_validate_torsion.psi 143.01 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B ASP 15 ? A ASP 1 2 1 Y 1 B PHE 16 ? A PHE 2 3 1 Y 1 B ALA 17 ? A ALA 3 4 1 Y 1 B ARG 18 ? A ARG 4 5 1 Y 1 B LYS 140 ? A LYS 126 # _em_ctf_correction.id 1 _em_ctf_correction.details AUTO3DEM _em_ctf_correction.type . # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.experimental_flag YES _em_entity_assembly_molwt.value 7 _em_entity_assembly_molwt.units MEGADALTONS # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.avg_electron_dose_per_image 15 _em_image_recording.details ? _em_image_recording.id 1 _em_image_recording.film_or_detector_model 'KODAK SO-163 FILM' _em_image_recording.imaging_id 1 _em_image_recording.detector_mode ? _em_image_recording.average_exposure_time ? _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.id _em_software.name _em_software.version _em_software.category _em_software.details _em_software.image_processing_id 1 Situs ? 'MODEL FITTING' ? ? 2 Auto3DEM ? RECONSTRUCTION ? 1 3 EMAN ? RECONSTRUCTION ? 1 # _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.concentration 0.1 _em_specimen.vitrification_applied YES _em_specimen.staining_applied NO _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.details ? # _em_virus_natural_host.entity_assembly_id 1 _em_virus_natural_host.id 1 _em_virus_natural_host.ncbi_tax_id 9606 _em_virus_natural_host.organism 'Homo sapiens' _em_virus_natural_host.strain ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 water HOH #