data_3J6O # _entry.id 3J6O # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.296 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3J6O RCSB RCSB160318 WWPDB D_1000160318 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details EMDB EMD-5927 'associated EM volume' . EMDB EMD-5928 'other EM volume' . PDB 3J6L unspecified . PDB 3J6M unspecified . PDB 3J6N unspecified . # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3J6O _pdbx_database_status.recvd_initial_deposition_date 2014-03-19 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Organtini, L.J.' 1 'Makhov, A.M.' 2 'Conway, J.F.' 3 'Hafenstein, S.' 4 'Carson, S.D.' 5 # _citation.id primary _citation.title 'Kinetic and structural analysis of coxsackievirus b3 receptor interactions and formation of the a-particle.' _citation.journal_abbrev J.Virol. _citation.journal_volume 88 _citation.page_first 5755 _citation.page_last 5765 _citation.year 2014 _citation.journal_id_ASTM JOVIAM _citation.country US _citation.journal_id_ISSN 0022-538X _citation.journal_id_CSD 0825 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24623425 _citation.pdbx_database_id_DOI 10.1128/JVI.00299-14 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Organtini, L.J.' 1 primary 'Makhov, A.M.' 2 primary 'Conway, J.F.' 3 primary 'Hafenstein, S.' 4 primary 'Carson, S.D.' 5 # _cell.entry_id 3J6O _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3J6O _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Coxsackie and adenovirus receptor' _entity.formula_weight 25046.229 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'SEE REMARK 999' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SGLSITTPEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSND VKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQK LSDSQTMPTPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVPPSNRAHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;SGLSITTPEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSND VKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQK LSDSQTMPTPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVPPSNRAHHHHHH ; _entity_poly.pdbx_strand_id S _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 GLY n 1 3 LEU n 1 4 SER n 1 5 ILE n 1 6 THR n 1 7 THR n 1 8 PRO n 1 9 GLU n 1 10 GLN n 1 11 ARG n 1 12 ILE n 1 13 GLU n 1 14 LYS n 1 15 ALA n 1 16 LYS n 1 17 GLY n 1 18 GLU n 1 19 THR n 1 20 ALA n 1 21 TYR n 1 22 LEU n 1 23 PRO n 1 24 CYS n 1 25 LYS n 1 26 PHE n 1 27 THR n 1 28 LEU n 1 29 SER n 1 30 PRO n 1 31 GLU n 1 32 ASP n 1 33 GLN n 1 34 GLY n 1 35 PRO n 1 36 LEU n 1 37 ASP n 1 38 ILE n 1 39 GLU n 1 40 TRP n 1 41 LEU n 1 42 ILE n 1 43 SER n 1 44 PRO n 1 45 SER n 1 46 ASP n 1 47 ASN n 1 48 GLN n 1 49 ILE n 1 50 VAL n 1 51 ASP n 1 52 GLN n 1 53 VAL n 1 54 ILE n 1 55 ILE n 1 56 LEU n 1 57 TYR n 1 58 SER n 1 59 GLY n 1 60 ASP n 1 61 LYS n 1 62 ILE n 1 63 TYR n 1 64 ASP n 1 65 ASN n 1 66 TYR n 1 67 TYR n 1 68 PRO n 1 69 ASP n 1 70 LEU n 1 71 LYS n 1 72 GLY n 1 73 ARG n 1 74 VAL n 1 75 HIS n 1 76 PHE n 1 77 THR n 1 78 SER n 1 79 ASN n 1 80 ASP n 1 81 VAL n 1 82 LYS n 1 83 SER n 1 84 GLY n 1 85 ASP n 1 86 ALA n 1 87 SER n 1 88 ILE n 1 89 ASN n 1 90 VAL n 1 91 THR n 1 92 ASN n 1 93 LEU n 1 94 GLN n 1 95 LEU n 1 96 SER n 1 97 ASP n 1 98 ILE n 1 99 GLY n 1 100 THR n 1 101 TYR n 1 102 GLN n 1 103 CYS n 1 104 LYS n 1 105 VAL n 1 106 LYS n 1 107 LYS n 1 108 ALA n 1 109 PRO n 1 110 GLY n 1 111 VAL n 1 112 ALA n 1 113 ASN n 1 114 LYS n 1 115 LYS n 1 116 PHE n 1 117 LEU n 1 118 LEU n 1 119 THR n 1 120 VAL n 1 121 LEU n 1 122 VAL n 1 123 LYS n 1 124 PRO n 1 125 SER n 1 126 GLY n 1 127 THR n 1 128 ARG n 1 129 CYS n 1 130 PHE n 1 131 VAL n 1 132 ASP n 1 133 GLY n 1 134 SER n 1 135 GLU n 1 136 GLU n 1 137 ILE n 1 138 GLY n 1 139 ASN n 1 140 ASP n 1 141 PHE n 1 142 LYS n 1 143 LEU n 1 144 LYS n 1 145 CYS n 1 146 GLU n 1 147 PRO n 1 148 LYS n 1 149 GLU n 1 150 GLY n 1 151 SER n 1 152 LEU n 1 153 PRO n 1 154 LEU n 1 155 GLN n 1 156 PHE n 1 157 GLU n 1 158 TRP n 1 159 GLN n 1 160 LYS n 1 161 LEU n 1 162 SER n 1 163 ASP n 1 164 SER n 1 165 GLN n 1 166 THR n 1 167 MET n 1 168 PRO n 1 169 THR n 1 170 PRO n 1 171 TRP n 1 172 LEU n 1 173 ALA n 1 174 GLU n 1 175 MET n 1 176 THR n 1 177 SER n 1 178 PRO n 1 179 VAL n 1 180 ILE n 1 181 SER n 1 182 VAL n 1 183 LYS n 1 184 ASN n 1 185 ALA n 1 186 SER n 1 187 SER n 1 188 GLU n 1 189 TYR n 1 190 SER n 1 191 GLY n 1 192 THR n 1 193 TYR n 1 194 SER n 1 195 CYS n 1 196 THR n 1 197 VAL n 1 198 GLN n 1 199 ASN n 1 200 ARG n 1 201 VAL n 1 202 GLY n 1 203 SER n 1 204 ASP n 1 205 GLN n 1 206 CYS n 1 207 MET n 1 208 LEU n 1 209 ARG n 1 210 LEU n 1 211 ASP n 1 212 VAL n 1 213 VAL n 1 214 PRO n 1 215 PRO n 1 216 SER n 1 217 ASN n 1 218 ARG n 1 219 ALA n 1 220 HIS n 1 221 HIS n 1 222 HIS n 1 223 HIS n 1 224 HIS n 1 225 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3J6O _struct_ref.pdbx_db_accession 3J6O _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;SGLSITTPEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSND VKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQK LSDSQTMPTPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVPPSNRAHHHHHH ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3J6O _struct_ref_seq.pdbx_strand_id S _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 225 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 3J6O _struct_ref_seq.db_align_beg -1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 223 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg -1 _struct_ref_seq.pdbx_auth_seq_align_end 223 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3J6O _exptl.method 'ELECTRON MICROSCOPY' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine_hist.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1465 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1465 _refine_hist.d_res_high . _refine_hist.d_res_low . # _struct.entry_id 3J6O _struct.title 'Kinetic and Structural Analysis of Coxsackievirus B3 Receptor Interactions and Formation of the A-particle' _struct.pdbx_descriptor 'Coxsackie and adenovirus receptor' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3J6O _struct_keywords.pdbx_keywords 'CELL ADHESION' _struct_keywords.text 'Coxsackievirus B3, CVB3, CAR, CELL ADHESION' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TYR A 67 ? LYS A 71 ? TYR S 65 LYS S 69 5 ? 5 HELX_P HELX_P2 2 ASP A 80 ? GLY A 84 ? ASP S 78 GLY S 82 5 ? 5 HELX_P HELX_P3 3 GLN A 94 ? ASP A 97 ? GLN S 92 ASP S 95 5 ? 4 HELX_P HELX_P4 4 PRO A 168 ? MET A 175 ? PRO S 166 MET S 173 5 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 24 SG ? ? ? 1_555 A CYS 103 SG ? ? S CYS 22 S CYS 101 1_555 ? ? ? ? ? ? ? 2.053 ? disulf2 disulf ? ? A CYS 129 SG ? ? ? 1_555 A CYS 206 SG ? ? S CYS 127 S CYS 204 1_555 ? ? ? ? ? ? ? 2.046 ? disulf3 disulf ? ? A CYS 145 SG ? ? ? 1_555 A CYS 195 SG ? ? S CYS 143 S CYS 193 1_555 ? ? ? ? ? ? ? 2.039 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ALA 108 A . ? ALA 106 S PRO 109 A ? PRO 107 S 1 4.26 2 LYS 148 A . ? LYS 146 S GLU 149 A ? GLU 147 S 1 3.74 3 LEU 152 A . ? LEU 150 S PRO 153 A ? PRO 151 S 1 -0.82 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 3 ? C ? 3 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 10 ? ALA A 15 ? GLN S 8 ALA S 13 A 2 GLY A 110 ? LEU A 121 ? GLY S 108 LEU S 119 A 3 GLY A 99 ? LYS A 107 ? GLY S 97 LYS S 105 A 4 ASP A 37 ? PRO A 44 ? ASP S 35 PRO S 42 A 5 GLN A 52 ? SER A 58 ? GLN S 50 SER S 56 A 6 LYS A 61 ? TYR A 63 ? LYS S 59 TYR S 61 B 1 ALA A 20 ? LEU A 22 ? ALA S 18 LEU S 20 B 2 ILE A 88 ? VAL A 90 ? ILE S 86 VAL S 88 B 3 VAL A 74 ? PHE A 76 ? VAL S 72 PHE S 74 C 1 ARG A 128 ? VAL A 131 ? ARG S 126 VAL S 129 C 2 LEU A 143 ? GLU A 146 ? LEU S 141 GLU S 144 C 3 VAL A 179 ? ILE A 180 ? VAL S 177 ILE S 178 D 1 GLN A 155 ? GLN A 159 ? GLN S 153 GLN S 157 D 2 SER A 194 ? GLN A 198 ? SER S 192 GLN S 196 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLN A 10 ? N GLN S 8 O LEU A 117 ? O LEU S 115 A 2 3 O PHE A 116 ? O PHE S 114 N TYR A 101 ? N TYR S 99 A 3 4 O LYS A 106 ? O LYS S 104 N ASP A 37 ? N ASP S 35 A 4 5 N ILE A 42 ? N ILE S 40 O GLN A 52 ? O GLN S 50 A 5 6 N SER A 58 ? N SER S 56 O LYS A 61 ? O LYS S 59 B 1 2 N ALA A 20 ? N ALA S 18 O VAL A 90 ? O VAL S 88 B 2 3 O ASN A 89 ? O ASN S 87 N HIS A 75 ? N HIS S 73 C 1 2 N ARG A 128 ? N ARG S 126 O GLU A 146 ? O GLU S 144 C 2 3 N LEU A 143 ? N LEU S 141 O ILE A 180 ? O ILE S 178 D 1 2 N GLN A 155 ? N GLN S 153 O GLN A 198 ? O GLN S 196 # _database_PDB_matrix.entry_id 3J6O _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3J6O _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -1 ? ? ? S . n A 1 2 GLY 2 0 ? ? ? S . n A 1 3 LEU 3 1 ? ? ? S . n A 1 4 SER 4 2 ? ? ? S . n A 1 5 ILE 5 3 ? ? ? S . n A 1 6 THR 6 4 ? ? ? S . n A 1 7 THR 7 5 ? ? ? S . n A 1 8 PRO 8 6 6 PRO PRO S . n A 1 9 GLU 9 7 7 GLU GLU S . n A 1 10 GLN 10 8 8 GLN GLN S . n A 1 11 ARG 11 9 9 ARG ARG S . n A 1 12 ILE 12 10 10 ILE ILE S . n A 1 13 GLU 13 11 11 GLU GLU S . n A 1 14 LYS 14 12 12 LYS LYS S . n A 1 15 ALA 15 13 13 ALA ALA S . n A 1 16 LYS 16 14 14 LYS LYS S . n A 1 17 GLY 17 15 15 GLY GLY S . n A 1 18 GLU 18 16 16 GLU GLU S . n A 1 19 THR 19 17 17 THR THR S . n A 1 20 ALA 20 18 18 ALA ALA S . n A 1 21 TYR 21 19 19 TYR TYR S . n A 1 22 LEU 22 20 20 LEU LEU S . n A 1 23 PRO 23 21 21 PRO PRO S . n A 1 24 CYS 24 22 22 CYS CYS S . n A 1 25 LYS 25 23 23 LYS LYS S . n A 1 26 PHE 26 24 24 PHE PHE S . n A 1 27 THR 27 25 25 THR THR S . n A 1 28 LEU 28 26 26 LEU LEU S . n A 1 29 SER 29 27 27 SER SER S . n A 1 30 PRO 30 28 28 PRO PRO S . n A 1 31 GLU 31 29 29 GLU GLU S . n A 1 32 ASP 32 30 30 ASP ASP S . n A 1 33 GLN 33 31 31 GLN GLN S . n A 1 34 GLY 34 32 32 GLY GLY S . n A 1 35 PRO 35 33 33 PRO PRO S . n A 1 36 LEU 36 34 34 LEU LEU S . n A 1 37 ASP 37 35 35 ASP ASP S . n A 1 38 ILE 38 36 36 ILE ILE S . n A 1 39 GLU 39 37 37 GLU GLU S . n A 1 40 TRP 40 38 38 TRP TRP S . n A 1 41 LEU 41 39 39 LEU LEU S . n A 1 42 ILE 42 40 40 ILE ILE S . n A 1 43 SER 43 41 41 SER SER S . n A 1 44 PRO 44 42 42 PRO PRO S . n A 1 45 SER 45 43 43 SER SER S . n A 1 46 ASP 46 44 44 ASP ASP S . n A 1 47 ASN 47 45 45 ASN ASN S . n A 1 48 GLN 48 46 46 GLN GLN S . n A 1 49 ILE 49 47 47 ILE ILE S . n A 1 50 VAL 50 48 48 VAL VAL S . n A 1 51 ASP 51 49 49 ASP ASP S . n A 1 52 GLN 52 50 50 GLN GLN S . n A 1 53 VAL 53 51 51 VAL VAL S . n A 1 54 ILE 54 52 52 ILE ILE S . n A 1 55 ILE 55 53 53 ILE ILE S . n A 1 56 LEU 56 54 54 LEU LEU S . n A 1 57 TYR 57 55 55 TYR TYR S . n A 1 58 SER 58 56 56 SER SER S . n A 1 59 GLY 59 57 57 GLY GLY S . n A 1 60 ASP 60 58 58 ASP ASP S . n A 1 61 LYS 61 59 59 LYS LYS S . n A 1 62 ILE 62 60 60 ILE ILE S . n A 1 63 TYR 63 61 61 TYR TYR S . n A 1 64 ASP 64 62 62 ASP ASP S . n A 1 65 ASN 65 63 63 ASN ASN S . n A 1 66 TYR 66 64 64 TYR TYR S . n A 1 67 TYR 67 65 65 TYR TYR S . n A 1 68 PRO 68 66 66 PRO PRO S . n A 1 69 ASP 69 67 67 ASP ASP S . n A 1 70 LEU 70 68 68 LEU LEU S . n A 1 71 LYS 71 69 69 LYS LYS S . n A 1 72 GLY 72 70 70 GLY GLY S . n A 1 73 ARG 73 71 71 ARG ARG S . n A 1 74 VAL 74 72 72 VAL VAL S . n A 1 75 HIS 75 73 73 HIS HIS S . n A 1 76 PHE 76 74 74 PHE PHE S . n A 1 77 THR 77 75 75 THR THR S . n A 1 78 SER 78 76 76 SER SER S . n A 1 79 ASN 79 77 77 ASN ASN S . n A 1 80 ASP 80 78 78 ASP ASP S . n A 1 81 VAL 81 79 79 VAL VAL S . n A 1 82 LYS 82 80 80 LYS LYS S . n A 1 83 SER 83 81 81 SER SER S . n A 1 84 GLY 84 82 82 GLY GLY S . n A 1 85 ASP 85 83 83 ASP ASP S . n A 1 86 ALA 86 84 84 ALA ALA S . n A 1 87 SER 87 85 85 SER SER S . n A 1 88 ILE 88 86 86 ILE ILE S . n A 1 89 ASN 89 87 87 ASN ASN S . n A 1 90 VAL 90 88 88 VAL VAL S . n A 1 91 THR 91 89 89 THR THR S . n A 1 92 ASN 92 90 90 ASN ASN S . n A 1 93 LEU 93 91 91 LEU LEU S . n A 1 94 GLN 94 92 92 GLN GLN S . n A 1 95 LEU 95 93 93 LEU LEU S . n A 1 96 SER 96 94 94 SER SER S . n A 1 97 ASP 97 95 95 ASP ASP S . n A 1 98 ILE 98 96 96 ILE ILE S . n A 1 99 GLY 99 97 97 GLY GLY S . n A 1 100 THR 100 98 98 THR THR S . n A 1 101 TYR 101 99 99 TYR TYR S . n A 1 102 GLN 102 100 100 GLN GLN S . n A 1 103 CYS 103 101 101 CYS CYS S . n A 1 104 LYS 104 102 102 LYS LYS S . n A 1 105 VAL 105 103 103 VAL VAL S . n A 1 106 LYS 106 104 104 LYS LYS S . n A 1 107 LYS 107 105 105 LYS LYS S . n A 1 108 ALA 108 106 106 ALA ALA S . n A 1 109 PRO 109 107 107 PRO PRO S . n A 1 110 GLY 110 108 108 GLY GLY S . n A 1 111 VAL 111 109 109 VAL VAL S . n A 1 112 ALA 112 110 110 ALA ALA S . n A 1 113 ASN 113 111 111 ASN ASN S . n A 1 114 LYS 114 112 112 LYS LYS S . n A 1 115 LYS 115 113 113 LYS LYS S . n A 1 116 PHE 116 114 114 PHE PHE S . n A 1 117 LEU 117 115 115 LEU LEU S . n A 1 118 LEU 118 116 116 LEU LEU S . n A 1 119 THR 119 117 117 THR THR S . n A 1 120 VAL 120 118 118 VAL VAL S . n A 1 121 LEU 121 119 119 LEU LEU S . n A 1 122 VAL 122 120 120 VAL VAL S . n A 1 123 LYS 123 121 121 LYS LYS S . n A 1 124 PRO 124 122 122 PRO PRO S . n A 1 125 SER 125 123 123 SER SER S . n A 1 126 GLY 126 124 124 GLY GLY S . n A 1 127 THR 127 125 125 THR THR S . n A 1 128 ARG 128 126 126 ARG ARG S . n A 1 129 CYS 129 127 127 CYS CYS S . n A 1 130 PHE 130 128 128 PHE PHE S . n A 1 131 VAL 131 129 129 VAL VAL S . n A 1 132 ASP 132 130 130 ASP ASP S . n A 1 133 GLY 133 131 ? ? ? S . n A 1 134 SER 134 132 ? ? ? S . n A 1 135 GLU 135 133 ? ? ? S . n A 1 136 GLU 136 134 ? ? ? S . n A 1 137 ILE 137 135 ? ? ? S . n A 1 138 GLY 138 136 136 GLY GLY S . n A 1 139 ASN 139 137 137 ASN ASN S . n A 1 140 ASP 140 138 138 ASP ASP S . n A 1 141 PHE 141 139 139 PHE PHE S . n A 1 142 LYS 142 140 140 LYS LYS S . n A 1 143 LEU 143 141 141 LEU LEU S . n A 1 144 LYS 144 142 142 LYS LYS S . n A 1 145 CYS 145 143 143 CYS CYS S . n A 1 146 GLU 146 144 144 GLU GLU S . n A 1 147 PRO 147 145 145 PRO PRO S . n A 1 148 LYS 148 146 146 LYS LYS S . n A 1 149 GLU 149 147 147 GLU GLU S . n A 1 150 GLY 150 148 148 GLY GLY S . n A 1 151 SER 151 149 149 SER SER S . n A 1 152 LEU 152 150 150 LEU LEU S . n A 1 153 PRO 153 151 151 PRO PRO S . n A 1 154 LEU 154 152 152 LEU LEU S . n A 1 155 GLN 155 153 153 GLN GLN S . n A 1 156 PHE 156 154 154 PHE PHE S . n A 1 157 GLU 157 155 155 GLU GLU S . n A 1 158 TRP 158 156 156 TRP TRP S . n A 1 159 GLN 159 157 157 GLN GLN S . n A 1 160 LYS 160 158 158 LYS LYS S . n A 1 161 LEU 161 159 ? ? ? S . n A 1 162 SER 162 160 ? ? ? S . n A 1 163 ASP 163 161 ? ? ? S . n A 1 164 SER 164 162 ? ? ? S . n A 1 165 GLN 165 163 ? ? ? S . n A 1 166 THR 166 164 ? ? ? S . n A 1 167 MET 167 165 165 MET MET S . n A 1 168 PRO 168 166 166 PRO PRO S . n A 1 169 THR 169 167 167 THR THR S . n A 1 170 PRO 170 168 168 PRO PRO S . n A 1 171 TRP 171 169 169 TRP TRP S . n A 1 172 LEU 172 170 170 LEU LEU S . n A 1 173 ALA 173 171 171 ALA ALA S . n A 1 174 GLU 174 172 172 GLU GLU S . n A 1 175 MET 175 173 173 MET MET S . n A 1 176 THR 176 174 174 THR THR S . n A 1 177 SER 177 175 175 SER SER S . n A 1 178 PRO 178 176 176 PRO PRO S . n A 1 179 VAL 179 177 177 VAL VAL S . n A 1 180 ILE 180 178 178 ILE ILE S . n A 1 181 SER 181 179 179 SER SER S . n A 1 182 VAL 182 180 180 VAL VAL S . n A 1 183 LYS 183 181 181 LYS LYS S . n A 1 184 ASN 184 182 182 ASN ASN S . n A 1 185 ALA 185 183 ? ? ? S . n A 1 186 SER 186 184 ? ? ? S . n A 1 187 SER 187 185 ? ? ? S . n A 1 188 GLU 188 186 ? ? ? S . n A 1 189 TYR 189 187 ? ? ? S . n A 1 190 SER 190 188 ? ? ? S . n A 1 191 GLY 191 189 ? ? ? S . n A 1 192 THR 192 190 ? ? ? S . n A 1 193 TYR 193 191 191 TYR TYR S . n A 1 194 SER 194 192 192 SER SER S . n A 1 195 CYS 195 193 193 CYS CYS S . n A 1 196 THR 196 194 194 THR THR S . n A 1 197 VAL 197 195 195 VAL VAL S . n A 1 198 GLN 198 196 196 GLN GLN S . n A 1 199 ASN 199 197 197 ASN ASN S . n A 1 200 ARG 200 198 198 ARG ARG S . n A 1 201 VAL 201 199 199 VAL VAL S . n A 1 202 GLY 202 200 200 GLY GLY S . n A 1 203 SER 203 201 201 SER SER S . n A 1 204 ASP 204 202 202 ASP ASP S . n A 1 205 GLN 205 203 203 GLN GLN S . n A 1 206 CYS 206 204 204 CYS CYS S . n A 1 207 MET 207 205 205 MET MET S . n A 1 208 LEU 208 206 206 LEU LEU S . n A 1 209 ARG 209 207 207 ARG ARG S . n A 1 210 LEU 210 208 208 LEU LEU S . n A 1 211 ASP 211 209 209 ASP ASP S . n A 1 212 VAL 212 210 210 VAL VAL S . n A 1 213 VAL 213 211 ? ? ? S . n A 1 214 PRO 214 212 ? ? ? S . n A 1 215 PRO 215 213 ? ? ? S . n A 1 216 SER 216 214 ? ? ? S . n A 1 217 ASN 217 215 ? ? ? S . n A 1 218 ARG 218 216 ? ? ? S . n A 1 219 ALA 219 217 ? ? ? S . n A 1 220 HIS 220 218 ? ? ? S . n A 1 221 HIS 221 219 ? ? ? S . n A 1 222 HIS 222 220 ? ? ? S . n A 1 223 HIS 223 221 ? ? ? S . n A 1 224 HIS 224 222 ? ? ? S . n A 1 225 HIS 225 223 ? ? ? S . n # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 'complete icosahedral assembly' ? 60-MERIC 60 2 'icosahedral asymmetric unit' ? monomeric 1 3 'icosahedral pentamer' ? pentameric 5 4 'icosahedral 23 hexamer' ? hexameric 6 5 'icosahedral asymmetric unit, std point frame' ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 '(1-60)' A 2 1 A 3 '(1-5)' A 4 '(1,2,6,10,23,24)' A 5 P A # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] P 'transform to point frame' ? ? 0.00000000 -1.00000000 0.00000000 0.00000 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 1 'point symmetry operation' ? ? 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 2 'point symmetry operation' ? ? 0.50000000 -0.80901699 0.30901699 0.00000 0.80901699 0.30901699 -0.50000000 0.00000 0.30901699 0.50000000 0.80901699 0.00000 3 'point symmetry operation' ? ? -0.30901699 -0.50000000 0.80901699 0.00000 0.50000000 -0.80901699 -0.30901699 0.00000 0.80901699 0.30901699 0.50000000 0.00000 4 'point symmetry operation' ? ? -0.30901699 0.50000000 0.80901699 0.00000 -0.50000000 -0.80901699 0.30901699 0.00000 0.80901699 -0.30901699 0.50000000 0.00000 5 'point symmetry operation' ? ? 0.50000000 0.80901699 0.30901699 0.00000 -0.80901699 0.30901699 0.50000000 0.00000 0.30901699 -0.50000000 0.80901699 0.00000 6 'point symmetry operation' ? ? -1.00000000 0.00000000 0.00000000 0.00000 0.00000000 -1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 7 'point symmetry operation' ? ? -0.50000000 0.80901699 -0.30901699 0.00000 -0.80901699 -0.30901699 0.50000000 0.00000 0.30901699 0.50000000 0.80901699 0.00000 8 'point symmetry operation' ? ? 0.30901699 0.50000000 -0.80901699 0.00000 -0.50000000 0.80901699 0.30901699 0.00000 0.80901699 0.30901699 0.50000000 0.00000 9 'point symmetry operation' ? ? 0.30901699 -0.50000000 -0.80901699 0.00000 0.50000000 0.80901699 -0.30901699 0.00000 0.80901699 -0.30901699 0.50000000 0.00000 10 'point symmetry operation' ? ? -0.50000000 -0.80901699 -0.30901699 0.00000 0.80901699 -0.30901699 -0.50000000 0.00000 0.30901699 -0.50000000 0.80901699 0.00000 11 'point symmetry operation' ? ? 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 -1.00000000 0.00000000 0.00000 0.00000000 0.00000000 -1.00000000 0.00000 12 'point symmetry operation' ? ? 0.50000000 -0.80901699 0.30901699 0.00000 -0.80901699 -0.30901699 0.50000000 0.00000 -0.30901699 -0.50000000 -0.80901699 0.00000 13 'point symmetry operation' ? ? -0.30901699 -0.50000000 0.80901699 0.00000 -0.50000000 0.80901699 0.30901699 0.00000 -0.80901699 -0.30901699 -0.50000000 0.00000 14 'point symmetry operation' ? ? -0.30901699 0.50000000 0.80901699 0.00000 0.50000000 0.80901699 -0.30901699 0.00000 -0.80901699 0.30901699 -0.50000000 0.00000 15 'point symmetry operation' ? ? 0.50000000 0.80901699 0.30901699 0.00000 0.80901699 -0.30901699 -0.50000000 0.00000 -0.30901699 0.50000000 -0.80901699 0.00000 16 'point symmetry operation' ? ? -1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 -1.00000000 0.00000 17 'point symmetry operation' ? ? -0.50000000 0.80901699 -0.30901699 0.00000 0.80901699 0.30901699 -0.50000000 0.00000 -0.30901699 -0.50000000 -0.80901699 0.00000 18 'point symmetry operation' ? ? 0.30901699 0.50000000 -0.80901699 0.00000 0.50000000 -0.80901699 -0.30901699 0.00000 -0.80901699 -0.30901699 -0.50000000 0.00000 19 'point symmetry operation' ? ? 0.30901699 -0.50000000 -0.80901699 0.00000 -0.50000000 -0.80901699 0.30901699 0.00000 -0.80901699 0.30901699 -0.50000000 0.00000 20 'point symmetry operation' ? ? -0.50000000 -0.80901699 -0.30901699 0.00000 -0.80901699 0.30901699 0.50000000 0.00000 -0.30901699 0.50000000 -0.80901699 0.00000 21 'point symmetry operation' ? ? 0.00000000 -1.00000000 0.00000000 0.00000 0.00000000 0.00000000 -1.00000000 0.00000 1.00000000 0.00000000 0.00000000 0.00000 22 'point symmetry operation' ? ? -0.80901699 -0.30901699 0.50000000 0.00000 -0.30901699 -0.50000000 -0.80901699 0.00000 0.50000000 -0.80901699 0.30901699 0.00000 23 'point symmetry operation' ? ? -0.50000000 0.80901699 0.30901699 0.00000 -0.80901699 -0.30901699 -0.50000000 0.00000 -0.30901699 -0.50000000 0.80901699 0.00000 24 'point symmetry operation' ? ? 0.50000000 0.80901699 -0.30901699 0.00000 -0.80901699 0.30901699 -0.50000000 0.00000 -0.30901699 0.50000000 0.80901699 0.00000 25 'point symmetry operation' ? ? 0.80901699 -0.30901699 -0.50000000 0.00000 -0.30901699 0.50000000 -0.80901699 0.00000 0.50000000 0.80901699 0.30901699 0.00000 26 'point symmetry operation' ? ? 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 -1.00000000 0.00000 -1.00000000 0.00000000 0.00000000 0.00000 27 'point symmetry operation' ? ? 0.80901699 0.30901699 -0.50000000 0.00000 -0.30901699 -0.50000000 -0.80901699 0.00000 -0.50000000 0.80901699 -0.30901699 0.00000 28 'point symmetry operation' ? ? 0.50000000 -0.80901699 -0.30901699 0.00000 -0.80901699 -0.30901699 -0.50000000 0.00000 0.30901699 0.50000000 -0.80901699 0.00000 29 'point symmetry operation' ? ? -0.50000000 -0.80901699 0.30901699 0.00000 -0.80901699 0.30901699 -0.50000000 0.00000 0.30901699 -0.50000000 -0.80901699 0.00000 30 'point symmetry operation' ? ? -0.80901699 0.30901699 0.50000000 0.00000 -0.30901699 0.50000000 -0.80901699 0.00000 -0.50000000 -0.80901699 -0.30901699 0.00000 31 'point symmetry operation' ? ? 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 1.00000000 0.00000000 0.00000000 0.00000 32 'point symmetry operation' ? ? 0.80901699 0.30901699 -0.50000000 0.00000 0.30901699 0.50000000 0.80901699 0.00000 0.50000000 -0.80901699 0.30901699 0.00000 33 'point symmetry operation' ? ? 0.50000000 -0.80901699 -0.30901699 0.00000 0.80901699 0.30901699 0.50000000 0.00000 -0.30901699 -0.50000000 0.80901699 0.00000 34 'point symmetry operation' ? ? -0.50000000 -0.80901699 0.30901699 0.00000 0.80901699 -0.30901699 0.50000000 0.00000 -0.30901699 0.50000000 0.80901699 0.00000 35 'point symmetry operation' ? ? -0.80901699 0.30901699 0.50000000 0.00000 0.30901699 -0.50000000 0.80901699 0.00000 0.50000000 0.80901699 0.30901699 0.00000 36 'point symmetry operation' ? ? 0.00000000 -1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 -1.00000000 0.00000000 0.00000000 0.00000 37 'point symmetry operation' ? ? -0.80901699 -0.30901699 0.50000000 0.00000 0.30901699 0.50000000 0.80901699 0.00000 -0.50000000 0.80901699 -0.30901699 0.00000 38 'point symmetry operation' ? ? -0.50000000 0.80901699 0.30901699 0.00000 0.80901699 0.30901699 0.50000000 0.00000 0.30901699 0.50000000 -0.80901699 0.00000 39 'point symmetry operation' ? ? 0.50000000 0.80901699 -0.30901699 0.00000 0.80901699 -0.30901699 0.50000000 0.00000 0.30901699 -0.50000000 -0.80901699 0.00000 40 'point symmetry operation' ? ? 0.80901699 -0.30901699 -0.50000000 0.00000 0.30901699 -0.50000000 0.80901699 0.00000 -0.50000000 -0.80901699 -0.30901699 0.00000 41 'point symmetry operation' ? ? 0.00000000 0.00000000 1.00000000 0.00000 -1.00000000 0.00000000 0.00000000 0.00000 0.00000000 -1.00000000 0.00000000 0.00000 42 'point symmetry operation' ? ? 0.30901699 0.50000000 0.80901699 0.00000 -0.50000000 0.80901699 -0.30901699 0.00000 -0.80901699 -0.30901699 0.50000000 0.00000 43 'point symmetry operation' ? ? 0.80901699 0.30901699 0.50000000 0.00000 0.30901699 0.50000000 -0.80901699 0.00000 -0.50000000 0.80901699 0.30901699 0.00000 44 'point symmetry operation' ? ? 0.80901699 -0.30901699 0.50000000 0.00000 0.30901699 -0.50000000 -0.80901699 0.00000 0.50000000 0.80901699 -0.30901699 0.00000 45 'point symmetry operation' ? ? 0.30901699 -0.50000000 0.80901699 0.00000 -0.50000000 -0.80901699 -0.30901699 0.00000 0.80901699 -0.30901699 -0.50000000 0.00000 46 'point symmetry operation' ? ? 0.00000000 0.00000000 1.00000000 0.00000 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 47 'point symmetry operation' ? ? 0.30901699 0.50000000 0.80901699 0.00000 0.50000000 -0.80901699 0.30901699 0.00000 0.80901699 0.30901699 -0.50000000 0.00000 48 'point symmetry operation' ? ? 0.80901699 0.30901699 0.50000000 0.00000 -0.30901699 -0.50000000 0.80901699 0.00000 0.50000000 -0.80901699 -0.30901699 0.00000 49 'point symmetry operation' ? ? 0.80901699 -0.30901699 0.50000000 0.00000 -0.30901699 0.50000000 0.80901699 0.00000 -0.50000000 -0.80901699 0.30901699 0.00000 50 'point symmetry operation' ? ? 0.30901699 -0.50000000 0.80901699 0.00000 0.50000000 0.80901699 0.30901699 0.00000 -0.80901699 0.30901699 0.50000000 0.00000 51 'point symmetry operation' ? ? 0.00000000 0.00000000 -1.00000000 0.00000 -1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 52 'point symmetry operation' ? ? -0.30901699 -0.50000000 -0.80901699 0.00000 -0.50000000 0.80901699 -0.30901699 0.00000 0.80901699 0.30901699 -0.50000000 0.00000 53 'point symmetry operation' ? ? -0.80901699 -0.30901699 -0.50000000 0.00000 0.30901699 0.50000000 -0.80901699 0.00000 0.50000000 -0.80901699 -0.30901699 0.00000 54 'point symmetry operation' ? ? -0.80901699 0.30901699 -0.50000000 0.00000 0.30901699 -0.50000000 -0.80901699 0.00000 -0.50000000 -0.80901699 0.30901699 0.00000 55 'point symmetry operation' ? ? -0.30901699 0.50000000 -0.80901699 0.00000 -0.50000000 -0.80901699 -0.30901699 0.00000 -0.80901699 0.30901699 0.50000000 0.00000 56 'point symmetry operation' ? ? 0.00000000 0.00000000 -1.00000000 0.00000 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 -1.00000000 0.00000000 0.00000 57 'point symmetry operation' ? ? -0.30901699 -0.50000000 -0.80901699 0.00000 0.50000000 -0.80901699 0.30901699 0.00000 -0.80901699 -0.30901699 0.50000000 0.00000 58 'point symmetry operation' ? ? -0.80901699 -0.30901699 -0.50000000 0.00000 -0.30901699 -0.50000000 0.80901699 0.00000 -0.50000000 0.80901699 0.30901699 0.00000 59 'point symmetry operation' ? ? -0.80901699 0.30901699 -0.50000000 0.00000 -0.30901699 0.50000000 0.80901699 0.00000 0.50000000 0.80901699 -0.30901699 0.00000 60 'point symmetry operation' ? ? -0.30901699 0.50000000 -0.80901699 0.00000 0.50000000 0.80901699 0.30901699 0.00000 0.80901699 -0.30901699 -0.50000000 0.00000 # _pdbx_point_symmetry.entry_id 3J6O _pdbx_point_symmetry.Schoenflies_symbol I # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-04-09 2 'Structure model' 1 1 2014-05-07 3 'Structure model' 1 2 2018-07-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category em_software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_em_software.image_processing_id' 2 3 'Structure model' '_em_software.name' # _pdbx_entry_details.entry_id 3J6O _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE HUMAN PROTEIN WAS IMAGED, BUT THE PROTEIN SEQUENCE THAT WAS FIT TO THE ELECTRON MICROSCOPY MAP WAS MURINE [UNP P97792 RESIDUES 18-236 WITH A C-TERMINAL (HIS)6 EXPRESSION TAG]. ; _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 3J6O _em_3d_fitting.ref_protocol 'RIGID BODY FIT' _em_3d_fitting.ref_space REAL _em_3d_fitting.overall_b_value ? _em_3d_fitting.target_criteria 'correlation coefficient' _em_3d_fitting.details 'REFINEMENT PROTOCOL--rigid body' _em_3d_fitting.method ? # _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.id 1 _em_3d_fitting_list.pdb_entry_id 3MJ7 _em_3d_fitting_list.pdb_chain_id S _em_3d_fitting_list.details ? # _em_3d_reconstruction.entry_id 3J6O _em_3d_reconstruction.id 1 _em_3d_reconstruction.resolution_method 'FSC 0.5 CUT-OFF' _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.method 'Common Lines' _em_3d_reconstruction.nominal_pixel_size 1.25 _em_3d_reconstruction.actual_pixel_size 1.25 _em_3d_reconstruction.resolution 9.0 _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.details '(Single particle details: Particles were selected using EMAN) (Single particle--Applied symmetry: I)' _em_3d_reconstruction.num_particles 9302 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.algorithm ? # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name '50 mM MES, 100 mM NaCl' _em_buffer.pH 6 _em_buffer.details '50 mM MES, 100 mM NaCl' # loop_ _em_entity_assembly.id _em_entity_assembly.name _em_entity_assembly.type _em_entity_assembly.parent_id _em_entity_assembly.synonym _em_entity_assembly.details _em_entity_assembly.oligomeric_details 1 'Coxsackievirus B3 complexed with CAR' COMPLEX 0 ? 'icosahedral virus' ? 2 'Human coxsackievirus B3' VIRUS 1 ? ? ? 3 'Coxsackievirus and adenovirus receptor' ? 1 ? ? ? # _em_image_scans.entry_id 3J6O _em_image_scans.id 1 _em_image_scans.image_recording_id 1 _em_image_scans.number_digital_images 96 _em_image_scans.citation_id ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.sampling_size ? _em_image_scans.scanner_model ? _em_image_scans.details ? # _em_imaging.entry_id 3J6O _em_imaging.id 1 _em_imaging.date 2012-08-01 _em_imaging.specimen_id 1 _em_imaging.temperature ? _em_imaging.microscope_model 'FEI TECNAI F20' _em_imaging.nominal_defocus_min 1980 _em_imaging.nominal_defocus_max 3660 _em_imaging.tilt_angle_min 0.0 _em_imaging.tilt_angle_max 0.0 _em_imaging.nominal_cs 2 _em_imaging.mode 'BRIGHT FIELD' _em_imaging.illumination_mode 'SPOT SCAN' _em_imaging.nominal_magnification 50000 _em_imaging.calibrated_magnification 50000 _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.accelerating_voltage 200 _em_imaging.details ? _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'GATAN LIQUID NITROGEN' _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.detector_distance 0.0 _em_imaging.electron_beam_tilt_params ? _em_imaging.astigmatism CTFFIND3 _em_imaging.citation_id ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details 'glow-discharged holey carbon Quantifoil electron microscopy grids' _em_sample_support.film_material ? _em_sample_support.grid_material ? _em_sample_support.grid_mesh_size ? _em_sample_support.grid_type ? _em_sample_support.method ? # _em_virus_entity.id 1 _em_virus_entity.virus_host_category VERTEBRATES _em_virus_entity.entity_assembly_id 1 _em_virus_entity.virus_type VIRION _em_virus_entity.virus_isolate STRAIN _em_virus_entity.empty NO _em_virus_entity.enveloped NO _em_virus_entity.details ? # _em_vitrification.entry_id 3J6O _em_vitrification.id 1 _em_vitrification.details 'Plunged into ethane-propane (FEI VITROBOT MARK III)' _em_vitrification.cryogen_name OTHER _em_vitrification.humidity 95 _em_vitrification.temp 95 _em_vitrification.instrument 'FEI VITROBOT MARK III' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.specimen_id 1 # _em_experiment.entry_id 3J6O _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' # _em_single_particle_entity.entry_id 3J6O _em_single_particle_entity.id 1 _em_single_particle_entity.point_symmetry I _em_single_particle_entity.image_processing_id 1 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU S 16 ? ? -117.41 -163.71 2 1 SER S 43 ? ? 47.45 17.46 3 1 TYR S 65 ? ? 57.38 73.58 4 1 LYS S 69 ? ? -54.40 108.64 5 1 SER S 81 ? ? -57.73 -4.26 6 1 ALA S 106 ? ? -39.99 130.20 7 1 LYS S 146 ? ? -173.41 127.19 8 1 MET S 173 ? ? -38.50 -28.66 9 1 SER S 179 ? ? -68.21 91.56 10 1 ASN S 197 ? ? -124.00 -158.36 11 1 ASP S 202 ? ? -172.75 148.49 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 S SER -1 ? A SER 1 2 1 Y 1 S GLY 0 ? A GLY 2 3 1 Y 1 S LEU 1 ? A LEU 3 4 1 Y 1 S SER 2 ? A SER 4 5 1 Y 1 S ILE 3 ? A ILE 5 6 1 Y 1 S THR 4 ? A THR 6 7 1 Y 1 S THR 5 ? A THR 7 8 1 Y 1 S GLY 131 ? A GLY 133 9 1 Y 1 S SER 132 ? A SER 134 10 1 Y 1 S GLU 133 ? A GLU 135 11 1 Y 1 S GLU 134 ? A GLU 136 12 1 Y 1 S ILE 135 ? A ILE 137 13 1 Y 1 S LEU 159 ? A LEU 161 14 1 Y 1 S SER 160 ? A SER 162 15 1 Y 1 S ASP 161 ? A ASP 163 16 1 Y 1 S SER 162 ? A SER 164 17 1 Y 1 S GLN 163 ? A GLN 165 18 1 Y 1 S THR 164 ? A THR 166 19 1 Y 1 S ALA 183 ? A ALA 185 20 1 Y 1 S SER 184 ? A SER 186 21 1 Y 1 S SER 185 ? A SER 187 22 1 Y 1 S GLU 186 ? A GLU 188 23 1 Y 1 S TYR 187 ? A TYR 189 24 1 Y 1 S SER 188 ? A SER 190 25 1 Y 1 S GLY 189 ? A GLY 191 26 1 Y 1 S THR 190 ? A THR 192 27 1 Y 1 S VAL 211 ? A VAL 213 28 1 Y 1 S PRO 212 ? A PRO 214 29 1 Y 1 S PRO 213 ? A PRO 215 30 1 Y 1 S SER 214 ? A SER 216 31 1 Y 1 S ASN 215 ? A ASN 217 32 1 Y 1 S ARG 216 ? A ARG 218 33 1 Y 1 S ALA 217 ? A ALA 219 34 1 Y 1 S HIS 218 ? A HIS 220 35 1 Y 1 S HIS 219 ? A HIS 221 36 1 Y 1 S HIS 220 ? A HIS 222 37 1 Y 1 S HIS 221 ? A HIS 223 38 1 Y 1 S HIS 222 ? A HIS 224 39 1 Y 1 S HIS 223 ? A HIS 225 # _em_ctf_correction.id 1 _em_ctf_correction.details AUTO3DEM _em_ctf_correction.type . # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.experimental_flag YES _em_entity_assembly_molwt.value 7 _em_entity_assembly_molwt.units MEGADALTONS # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.avg_electron_dose_per_image 15 _em_image_recording.details ? _em_image_recording.id 1 _em_image_recording.film_or_detector_model 'KODAK SO-163 FILM' _em_image_recording.imaging_id 1 _em_image_recording.detector_mode ? _em_image_recording.average_exposure_time ? _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.id _em_software.name _em_software.version _em_software.category _em_software.details _em_software.image_processing_id 1 Situs ? 'MODEL FITTING' ? ? 2 Auto3DEM ? RECONSTRUCTION ? 1 3 EMAN ? RECONSTRUCTION ? 1 # _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.concentration 0.1 _em_specimen.vitrification_applied YES _em_specimen.staining_applied NO _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.details ? # _em_virus_natural_host.entity_assembly_id 1 _em_virus_natural_host.id 1 _em_virus_natural_host.ncbi_tax_id 9606 _em_virus_natural_host.organism 'Homo sapiens' _em_virus_natural_host.strain ? #