HEADER VIRUS/SIGNALING PROTEIN 20-OCT-14 3J8F TITLE CRYO-EM RECONSTRUCTION OF POLIOVIRUS-RECEPTOR COMPLEX CAVEAT 3J8F RESIDUES 7 ASP 136 AND 7 ILE 137 ARE NOT PROPERLY LINKED. COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN VP1; COMPND 3 CHAIN: 1; COMPND 4 FRAGMENT: UNP RESIDUES 580-881; COMPND 5 SYNONYM: P1D, VIRION PROTEIN 1; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: CAPSID PROTEIN VP2; COMPND 8 CHAIN: 2; COMPND 9 FRAGMENT: UNP RESIDUES 70-341; COMPND 10 SYNONYM: P1B, VIRION PROTEIN 2; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: CAPSID PROTEIN VP3; COMPND 13 CHAIN: 3; COMPND 14 FRAGMENT: UNP RESIDUES 342-579; COMPND 15 SYNONYM: P1C, VIRION PROTEIN 3; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: CAPSID PROTEIN VP4; COMPND 18 CHAIN: 4; COMPND 19 FRAGMENT: UNP RESIDUES 2-69; COMPND 20 SYNONYM: P1A, VIRION PROTEIN 4; COMPND 21 MOL_ID: 5; COMPND 22 MOLECULE: POLIOVIRUS RECEPTOR; COMPND 23 CHAIN: 7; COMPND 24 SYNONYM: PVR/CD155, NECTIN-LIKE PROTEIN 5, NECL-5; COMPND 25 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN POLIOVIRUS 1 MAHONEY; SOURCE 3 ORGANISM_TAXID: 12081; SOURCE 4 MOL_ID: 2; SOURCE 5 ORGANISM_SCIENTIFIC: HUMAN POLIOVIRUS 1 MAHONEY; SOURCE 6 ORGANISM_TAXID: 12081; SOURCE 7 MOL_ID: 3; SOURCE 8 ORGANISM_SCIENTIFIC: HUMAN POLIOVIRUS 1 MAHONEY; SOURCE 9 ORGANISM_TAXID: 12081; SOURCE 10 MOL_ID: 4; SOURCE 11 ORGANISM_SCIENTIFIC: HUMAN POLIOVIRUS 1 MAHONEY; SOURCE 12 ORGANISM_TAXID: 12081; SOURCE 13 MOL_ID: 5; SOURCE 14 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 15 ORGANISM_COMMON: HUMAN; SOURCE 16 ORGANISM_TAXID: 9606; SOURCE 17 GENE: PVR, PVS; SOURCE 18 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS POLIOVIRUS, RECEPTOR, PVR, CD155, VIRUS-SIGNALING PROTEIN COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR M.STRAUSS,D.J.FILMAN,D.M.BELNAP,N.CHENG,R.T.NOEL,J.M.HOGLE REVDAT 5 21-DEC-22 3J8F 1 REMARK SEQADV HETSYN REVDAT 4 29-JUL-20 3J8F 1 COMPND REMARK SEQADV HETNAM REVDAT 4 2 1 LINK SITE ATOM REVDAT 3 18-JUL-18 3J8F 1 REMARK REVDAT 2 01-APR-15 3J8F 1 JRNL REVDAT 1 11-FEB-15 3J8F 0 JRNL AUTH M.STRAUSS,D.J.FILMAN,D.M.BELNAP,N.CHENG,R.T.NOEL,J.M.HOGLE JRNL TITL NECTIN-LIKE INTERACTIONS BETWEEN POLIOVIRUS AND ITS RECEPTOR JRNL TITL 2 TRIGGER CONFORMATIONAL CHANGES ASSOCIATED WITH CELL ENTRY. JRNL REF J.VIROL. V. 89 4143 2015 JRNL REFN ISSN 0022-538X JRNL PMID 25631086 JRNL DOI 10.1128/JVI.03101-14 REMARK 2 REMARK 2 RESOLUTION. 3.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : COOT, REFMAC, SPDBV, FREALIGN, RELION REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 1HXS REMARK 3 REFINEMENT SPACE : RECIPROCAL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : PSEUDO-REAL SPACE REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : REFINEMENT PROTOCOL--FLEXIBLE DETAILS--AFTER REMARK 3 RIGID-BODY FITTING, MANUAL REBUILDING OF THE MODEL WAS REMARK 3 ALTERNATED WITH AUTOMATED STEREOCHEMICALLY RESTRAINED REFINEMENT, REMARK 3 MINIMIZING THE DISCREPANCY BETWEEN THE EXPERIMENTAL AND MODEL- REMARK 3 BASED FOURIER AMPLITUDES AND PHASES. REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : 0.964 REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 4.000 REMARK 3 NUMBER OF PARTICLES : 9248 REMARK 3 CTF CORRECTION METHOD : NULL REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: (SINGLE PARTICLE--APPLIED SYMMETRY: I) REMARK 4 REMARK 4 3J8F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-OCT-14. REMARK 100 THE DEPOSITION ID IS D_1000160381. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : VITREOUS ICE (CRYO EM) REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : TYPE I POLIOVIRUS (MAHONEY) IN REMARK 245 COMPLEX WITH ENZYMATICALLY REMARK 245 DEGLYCOSYLATED 3-ECTO-DOMAIN REMARK 245 RECEPTOR (PVR, CD155); HUMAN REMARK 245 POLIOVIRUS 1 MAHONEY; REMARK 245 POLIOVIRUS RECEPTOR REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 1.00 REMARK 245 SAMPLE SUPPORT DETAILS : 200 MESH CU GRID WITH REMARK 245 FENESTRATED CARBON SUPPORT REMARK 245 SAMPLE VITRIFICATION DETAILS : SAMPLE MIXED AND FROZEN WITHIN REMARK 245 2 MINUTES BEFORE PLUNGING INTO REMARK 245 LIQUID ETHANE. REMARK 245 SAMPLE BUFFER : PBS REMARK 245 PH : 7.00 REMARK 245 SAMPLE DETAILS : 1 ICOSAHEDRAL VIRUS + 60 REMARK 245 RECEPTORS REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : 01-NOV-13 REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : 100.00 REMARK 245 MICROSCOPE MODEL : FEI POLARA 300 REMARK 245 DETECTOR TYPE : GATAN K2 (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 3000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.26 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 2500.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 27500 REMARK 245 CALIBRATED MAGNIFICATION : 25355 REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : K2 SUMMIT SUPER-RESOLUTION REMARK 245 MODE USED REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: 1, 2, 3, 4, 7, A, B, C, D, E, REMARK 350 AND CHAINS: F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT2 2 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT3 2 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT1 3 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT2 3 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 3 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 4 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 4 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 4 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 5 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 5 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT3 5 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 7 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 7 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 7 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT1 8 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 8 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 8 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 9 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT2 9 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 9 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 10 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT2 10 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 10 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 11 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 12 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 12 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT3 12 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 13 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 13 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 13 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 14 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT2 14 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 14 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 15 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT2 15 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT3 15 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 16 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 16 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 16 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 17 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT2 17 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 17 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 18 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT2 18 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 18 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 19 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 19 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 19 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 20 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 20 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 20 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 21 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 21 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 21 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 22 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT2 22 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT3 22 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT1 23 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 23 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT3 23 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 24 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 24 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 24 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 25 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT2 25 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 25 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT1 26 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 26 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 26 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 27 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT2 27 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 27 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 28 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 28 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 28 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 29 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 29 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT3 29 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 30 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT2 30 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT3 30 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 31 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 31 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 31 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 32 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 32 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 32 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT1 33 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 33 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 33 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 34 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 34 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT3 34 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 35 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 35 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT3 35 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT1 36 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 36 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 36 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 37 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 37 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT3 37 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 38 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 38 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT3 38 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 39 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 39 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 39 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 40 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 40 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 40 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 41 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 41 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 41 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 42 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT2 42 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT3 42 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT1 43 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 43 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 43 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT1 44 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 44 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 44 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 45 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT2 45 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT3 45 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 46 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 46 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 46 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 47 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 47 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT3 47 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 48 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 48 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 48 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 49 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 49 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 49 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT1 50 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 50 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT3 50 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT1 51 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 51 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 51 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 52 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT2 52 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 52 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 53 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 53 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 53 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 54 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 54 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 54 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT1 55 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT2 55 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 55 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT1 56 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 56 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 56 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 57 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 57 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 57 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT1 58 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 58 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 58 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT1 59 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 59 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 59 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 60 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 60 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 60 0.309017 0.809017 -0.500000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY 1 1 REMARK 465 LEU 1 2 REMARK 465 GLY 1 3 REMARK 465 GLN 1 4 REMARK 465 MET 1 5 REMARK 465 LEU 1 6 REMARK 465 GLU 1 7 REMARK 465 SER 1 8 REMARK 465 MET 1 9 REMARK 465 ILE 1 10 REMARK 465 ASP 1 11 REMARK 465 ASN 1 12 REMARK 465 THR 1 13 REMARK 465 VAL 1 14 REMARK 465 ARG 1 15 REMARK 465 GLU 1 16 REMARK 465 THR 1 17 REMARK 465 VAL 1 18 REMARK 465 GLY 1 19 REMARK 465 SER 2 1 REMARK 465 PRO 2 2 REMARK 465 ASN 2 3 REMARK 465 ILE 2 4 REMARK 465 GLU 2 5 REMARK 465 LEU 3 236 REMARK 465 ALA 3 237 REMARK 465 GLN 3 238 REMARK 465 MET 7 1 REMARK 465 ALA 7 2 REMARK 465 ARG 7 3 REMARK 465 ALA 7 4 REMARK 465 MET 7 5 REMARK 465 ALA 7 6 REMARK 465 ALA 7 7 REMARK 465 ALA 7 8 REMARK 465 TRP 7 9 REMARK 465 PRO 7 10 REMARK 465 LEU 7 11 REMARK 465 LEU 7 12 REMARK 465 LEU 7 13 REMARK 465 VAL 7 14 REMARK 465 ALA 7 15 REMARK 465 LEU 7 16 REMARK 465 LEU 7 17 REMARK 465 VAL 7 18 REMARK 465 LEU 7 19 REMARK 465 SER 7 20 REMARK 465 TRP 7 21 REMARK 465 PRO 7 22 REMARK 465 PRO 7 23 REMARK 465 PRO 7 24 REMARK 465 GLY 7 25 REMARK 465 THR 7 26 REMARK 465 GLY 7 27 REMARK 465 PRO 7 334 REMARK 465 SER 7 335 REMARK 465 GLU 7 336 REMARK 465 HIS 7 337 REMARK 465 SER 7 338 REMARK 465 GLY 7 339 REMARK 465 ILE 7 340 REMARK 465 SER 7 341 REMARK 465 ARG 7 342 REMARK 465 ASN 7 343 REMARK 465 ALA 7 344 REMARK 465 ILE 7 345 REMARK 465 ILE 7 346 REMARK 465 PHE 7 347 REMARK 465 LEU 7 348 REMARK 465 VAL 7 349 REMARK 465 LEU 7 350 REMARK 465 GLY 7 351 REMARK 465 ILE 7 352 REMARK 465 LEU 7 353 REMARK 465 VAL 7 354 REMARK 465 PHE 7 355 REMARK 465 LEU 7 356 REMARK 465 ILE 7 357 REMARK 465 LEU 7 358 REMARK 465 LEU 7 359 REMARK 465 GLY 7 360 REMARK 465 ILE 7 361 REMARK 465 GLY 7 362 REMARK 465 ILE 7 363 REMARK 465 TYR 7 364 REMARK 465 PHE 7 365 REMARK 465 TYR 7 366 REMARK 465 TRP 7 367 REMARK 465 SER 7 368 REMARK 465 LYS 7 369 REMARK 465 CYS 7 370 REMARK 465 SER 7 371 REMARK 465 ARG 7 372 REMARK 465 GLU 7 373 REMARK 465 VAL 7 374 REMARK 465 LEU 7 375 REMARK 465 TRP 7 376 REMARK 465 HIS 7 377 REMARK 465 CYS 7 378 REMARK 465 HIS 7 379 REMARK 465 LEU 7 380 REMARK 465 CYS 7 381 REMARK 465 PRO 7 382 REMARK 465 SER 7 383 REMARK 465 SER 7 384 REMARK 465 THR 7 385 REMARK 465 GLU 7 386 REMARK 465 HIS 7 387 REMARK 465 ALA 7 388 REMARK 465 SER 7 389 REMARK 465 ALA 7 390 REMARK 465 SER 7 391 REMARK 465 ALA 7 392 REMARK 465 ASN 7 393 REMARK 465 GLY 7 394 REMARK 465 HIS 7 395 REMARK 465 VAL 7 396 REMARK 465 SER 7 397 REMARK 465 TYR 7 398 REMARK 465 SER 7 399 REMARK 465 ALA 7 400 REMARK 465 VAL 7 401 REMARK 465 SER 7 402 REMARK 465 ARG 7 403 REMARK 465 GLU 7 404 REMARK 465 ASN 7 405 REMARK 465 SER 7 406 REMARK 465 SER 7 407 REMARK 465 SER 7 408 REMARK 465 GLN 7 409 REMARK 465 ASP 7 410 REMARK 465 PRO 7 411 REMARK 465 GLN 7 412 REMARK 465 THR 7 413 REMARK 465 GLU 7 414 REMARK 465 GLY 7 415 REMARK 465 THR 7 416 REMARK 465 ARG 7 417 REMARK 465 HIS 7 418 REMARK 465 HIS 7 419 REMARK 465 HIS 7 420 REMARK 465 HIS 7 421 REMARK 465 HIS 7 422 REMARK 465 HIS 7 423 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG1 THR 1 292 ND2 ASN 3 63 2.02 REMARK 500 O LEU 2 86 N ASP 2 88 2.03 REMARK 500 OD1 ASP 3 50 OG SER 3 215 2.04 REMARK 500 O ALA 2 240 N GLU 2 242 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU 3 14 CA - CB - CG ANGL. DEV. = 17.0 DEGREES REMARK 500 CYS 7 123 CA - CB - SG ANGL. DEV. = 6.6 DEGREES REMARK 500 TRP 7 138 CB - CA - C ANGL. DEV. = -12.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG 1 24 54.28 -99.21 REMARK 500 ASP 1 25 -110.24 -90.28 REMARK 500 ALA 1 26 110.05 175.27 REMARK 500 LEU 1 27 136.53 -35.83 REMARK 500 PRO 1 35 -174.77 -51.87 REMARK 500 HIS 1 37 20.65 -176.24 REMARK 500 THR 1 45 -131.51 -109.34 REMARK 500 ALA 1 46 88.04 149.96 REMARK 500 VAL 1 61 162.16 150.59 REMARK 500 GLN 1 68 109.01 -42.02 REMARK 500 PHE 1 81 41.97 -98.60 REMARK 500 THR 1 98 5.13 -64.46 REMARK 500 THR 1 111 110.57 -177.30 REMARK 500 LYS 1 113 17.58 -47.73 REMARK 500 GLN 1 117 -81.25 -44.70 REMARK 500 GLU 1 123 -4.50 -57.39 REMARK 500 GLU 1 133 65.98 -113.07 REMARK 500 ALA 1 140 131.79 -176.88 REMARK 500 THR 1 143 -76.30 -46.14 REMARK 500 ASN 1 152 104.30 -20.80 REMARK 500 PRO 1 162 110.36 -38.17 REMARK 500 GLU 1 168 -80.00 -68.95 REMARK 500 SER 1 179 20.43 -143.02 REMARK 500 PRO 1 181 97.93 -30.09 REMARK 500 TYR 1 198 93.48 -41.90 REMARK 500 VAL 1 199 30.02 -87.38 REMARK 500 SER 1 202 -152.49 -95.15 REMARK 500 ALA 1 204 139.09 172.56 REMARK 500 ALA 1 223 -70.93 -79.22 REMARK 500 LEU 1 224 -34.54 -24.78 REMARK 500 ASP 1 226 -153.04 -121.64 REMARK 500 SER 1 227 154.74 151.95 REMARK 500 ALA 1 232 -97.73 -110.18 REMARK 500 ASP 1 236 -76.84 -57.79 REMARK 500 VAL 1 245 -33.72 35.38 REMARK 500 HIS 1 248 107.41 -43.07 REMARK 500 LYS 1 264 -92.59 -78.83 REMARK 500 HIS 1 265 89.06 -68.41 REMARK 500 CYS 1 270 102.53 71.07 REMARK 500 ALA 1 278 127.79 -26.90 REMARK 500 VAL 1 284 -14.43 -45.95 REMARK 500 ASP 1 285 154.94 -44.84 REMARK 500 THR 1 290 -12.33 -49.57 REMARK 500 LEU 1 294 174.61 -58.20 REMARK 500 LYS 1 297 130.24 -175.47 REMARK 500 LEU 1 299 -3.51 -52.24 REMARK 500 THR 1 300 53.83 -146.59 REMARK 500 ASP 2 11 -33.61 -33.35 REMARK 500 GLN 2 15 59.68 -156.58 REMARK 500 LEU 2 18 125.42 -31.96 REMARK 500 REMARK 500 THIS ENTRY HAS 189 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-6147 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-6148 RELATED DB: EMDB REMARK 900 RELATED ID: 3J6I RELATED DB: PDB DBREF 3J8F 1 1 302 UNP P03300 POLG_POL1M 580 881 DBREF 3J8F 2 1 272 UNP P03300 POLG_POL1M 70 341 DBREF 3J8F 3 1 238 UNP P03300 POLG_POL1M 342 579 DBREF 3J8F 4 2 69 UNP P03300 POLG_POL1M 2 69 DBREF 3J8F 7 1 417 UNP P15151 PVR_HUMAN 1 417 SEQADV 3J8F SER 3 123 UNP P03300 PHE 464 CONFLICT SEQADV 3J8F MYR 4 1 UNP P03300 MODIFIED RESIDUE SEQADV 3J8F HIS 7 418 UNP P15151 EXPRESSION TAG SEQADV 3J8F HIS 7 419 UNP P15151 EXPRESSION TAG SEQADV 3J8F HIS 7 420 UNP P15151 EXPRESSION TAG SEQADV 3J8F HIS 7 421 UNP P15151 EXPRESSION TAG SEQADV 3J8F HIS 7 422 UNP P15151 EXPRESSION TAG SEQADV 3J8F HIS 7 423 UNP P15151 EXPRESSION TAG SEQRES 1 1 302 GLY LEU GLY GLN MET LEU GLU SER MET ILE ASP ASN THR SEQRES 2 1 302 VAL ARG GLU THR VAL GLY ALA ALA THR SER ARG ASP ALA SEQRES 3 1 302 LEU PRO ASN THR GLU ALA SER GLY PRO THR HIS SER LYS SEQRES 4 1 302 GLU ILE PRO ALA LEU THR ALA VAL GLU THR GLY ALA THR SEQRES 5 1 302 ASN PRO LEU VAL PRO SER ASP THR VAL GLN THR ARG HIS SEQRES 6 1 302 VAL VAL GLN HIS ARG SER ARG SER GLU SER SER ILE GLU SEQRES 7 1 302 SER PHE PHE ALA ARG GLY ALA CYS VAL THR ILE MET THR SEQRES 8 1 302 VAL ASP ASN PRO ALA SER THR THR ASN LYS ASP LYS LEU SEQRES 9 1 302 PHE ALA VAL TRP LYS ILE THR TYR LYS ASP THR VAL GLN SEQRES 10 1 302 LEU ARG ARG LYS LEU GLU PHE PHE THR TYR SER ARG PHE SEQRES 11 1 302 ASP MET GLU LEU THR PHE VAL VAL THR ALA ASN PHE THR SEQRES 12 1 302 GLU THR ASN ASN GLY HIS ALA LEU ASN GLN VAL TYR GLN SEQRES 13 1 302 ILE MET TYR VAL PRO PRO GLY ALA PRO VAL PRO GLU LYS SEQRES 14 1 302 TRP ASP ASP TYR THR TRP GLN THR SER SER ASN PRO SER SEQRES 15 1 302 ILE PHE TYR THR TYR GLY THR ALA PRO ALA ARG ILE SER SEQRES 16 1 302 VAL PRO TYR VAL GLY ILE SER ASN ALA TYR SER HIS PHE SEQRES 17 1 302 TYR ASP GLY PHE SER LYS VAL PRO LEU LYS ASP GLN SER SEQRES 18 1 302 ALA ALA LEU GLY ASP SER LEU TYR GLY ALA ALA SER LEU SEQRES 19 1 302 ASN ASP PHE GLY ILE LEU ALA VAL ARG VAL VAL ASN ASP SEQRES 20 1 302 HIS ASN PRO THR LYS VAL THR SER LYS ILE ARG VAL TYR SEQRES 21 1 302 LEU LYS PRO LYS HIS ILE ARG VAL TRP CYS PRO ARG PRO SEQRES 22 1 302 PRO ARG ALA VAL ALA TYR TYR GLY PRO GLY VAL ASP TYR SEQRES 23 1 302 LYS ASP GLY THR LEU THR PRO LEU SER THR LYS ASP LEU SEQRES 24 1 302 THR THR TYR SEQRES 1 2 272 SER PRO ASN ILE GLU ALA CYS GLY TYR SER ASP ARG VAL SEQRES 2 2 272 LEU GLN LEU THR LEU GLY ASN SER THR ILE THR THR GLN SEQRES 3 2 272 GLU ALA ALA ASN SER VAL VAL ALA TYR GLY ARG TRP PRO SEQRES 4 2 272 GLU TYR LEU ARG ASP SER GLU ALA ASN PRO VAL ASP GLN SEQRES 5 2 272 PRO THR GLU PRO ASP VAL ALA ALA CYS ARG PHE TYR THR SEQRES 6 2 272 LEU ASP THR VAL SER TRP THR LYS GLU SER ARG GLY TRP SEQRES 7 2 272 TRP TRP LYS LEU PRO ASP ALA LEU ARG ASP MET GLY LEU SEQRES 8 2 272 PHE GLY GLN ASN MET TYR TYR HIS TYR LEU GLY ARG SER SEQRES 9 2 272 GLY TYR THR VAL HIS VAL GLN CYS ASN ALA SER LYS PHE SEQRES 10 2 272 HIS GLN GLY ALA LEU GLY VAL PHE ALA VAL PRO GLU MET SEQRES 11 2 272 CYS LEU ALA GLY ASP SER ASN THR THR THR MET HIS THR SEQRES 12 2 272 SER TYR GLN ASN ALA ASN PRO GLY GLU LYS GLY GLY THR SEQRES 13 2 272 PHE THR GLY THR PHE THR PRO ASP ASN ASN GLN THR SER SEQRES 14 2 272 PRO ALA ARG ARG PHE CYS PRO VAL ASP TYR LEU LEU GLY SEQRES 15 2 272 ASN GLY THR LEU LEU GLY ASN ALA PHE VAL PHE PRO HIS SEQRES 16 2 272 GLN ILE ILE ASN LEU ARG THR ASN ASN CYS ALA THR LEU SEQRES 17 2 272 VAL LEU PRO TYR VAL ASN SER LEU SER ILE ASP SER MET SEQRES 18 2 272 VAL LYS HIS ASN ASN TRP GLY ILE ALA ILE LEU PRO LEU SEQRES 19 2 272 ALA PRO LEU ASN PHE ALA SER GLU SER SER PRO GLU ILE SEQRES 20 2 272 PRO ILE THR LEU THR ILE ALA PRO MET CYS CYS GLU PHE SEQRES 21 2 272 ASN GLY LEU ARG ASN ILE THR LEU PRO ARG LEU GLN SEQRES 1 3 238 GLY LEU PRO VAL MET ASN THR PRO GLY SER ASN GLN TYR SEQRES 2 3 238 LEU THR ALA ASP ASN PHE GLN SER PRO CYS ALA LEU PRO SEQRES 3 3 238 GLU PHE ASP VAL THR PRO PRO ILE ASP ILE PRO GLY GLU SEQRES 4 3 238 VAL LYS ASN MET MET GLU LEU ALA GLU ILE ASP THR MET SEQRES 5 3 238 ILE PRO PHE ASP LEU SER ALA THR LYS LYS ASN THR MET SEQRES 6 3 238 GLU MET TYR ARG VAL ARG LEU SER ASP LYS PRO HIS THR SEQRES 7 3 238 ASP ASP PRO ILE LEU CYS LEU SER LEU SER PRO ALA SER SEQRES 8 3 238 ASP PRO ARG LEU SER HIS THR MET LEU GLY GLU ILE LEU SEQRES 9 3 238 ASN TYR TYR THR HIS TRP ALA GLY SER LEU LYS PHE THR SEQRES 10 3 238 PHE LEU PHE CYS GLY SER MET MET ALA THR GLY LYS LEU SEQRES 11 3 238 LEU VAL SER TYR ALA PRO PRO GLY ALA ASP PRO PRO LYS SEQRES 12 3 238 LYS ARG LYS GLU ALA MET LEU GLY THR HIS VAL ILE TRP SEQRES 13 3 238 ASP ILE GLY LEU GLN SER SER CYS THR MET VAL VAL PRO SEQRES 14 3 238 TRP ILE SER ASN THR THR TYR ARG GLN THR ILE ASP ASP SEQRES 15 3 238 SER PHE THR GLU GLY GLY TYR ILE SER VAL PHE TYR GLN SEQRES 16 3 238 THR ARG ILE VAL VAL PRO LEU SER THR PRO ARG GLU MET SEQRES 17 3 238 ASP ILE LEU GLY PHE VAL SER ALA CYS ASN ASP PHE SER SEQRES 18 3 238 VAL ARG LEU LEU ARG ASP THR THR HIS ILE GLU GLN LYS SEQRES 19 3 238 ALA LEU ALA GLN SEQRES 1 4 69 MYR GLY ALA GLN VAL SER SER GLN LYS VAL GLY ALA HIS SEQRES 2 4 69 GLU ASN SER ASN ARG ALA TYR GLY GLY SER THR ILE ASN SEQRES 3 4 69 TYR THR THR ILE ASN TYR TYR ARG ASP SER ALA SER ASN SEQRES 4 4 69 ALA ALA SER LYS GLN ASP PHE SER GLN ASP PRO SER LYS SEQRES 5 4 69 PHE THR GLU PRO ILE LYS ASP VAL LEU ILE LYS THR ALA SEQRES 6 4 69 PRO MET LEU ASN SEQRES 1 7 423 MET ALA ARG ALA MET ALA ALA ALA TRP PRO LEU LEU LEU SEQRES 2 7 423 VAL ALA LEU LEU VAL LEU SER TRP PRO PRO PRO GLY THR SEQRES 3 7 423 GLY ASP VAL VAL VAL GLN ALA PRO THR GLN VAL PRO GLY SEQRES 4 7 423 PHE LEU GLY ASP SER VAL THR LEU PRO CYS TYR LEU GLN SEQRES 5 7 423 VAL PRO ASN MET GLU VAL THR HIS VAL SER GLN LEU THR SEQRES 6 7 423 TRP ALA ARG HIS GLY GLU SER GLY SER MET ALA VAL PHE SEQRES 7 7 423 HIS GLN THR GLN GLY PRO SER TYR SER GLU SER LYS ARG SEQRES 8 7 423 LEU GLU PHE VAL ALA ALA ARG LEU GLY ALA GLU LEU ARG SEQRES 9 7 423 ASN ALA SER LEU ARG MET PHE GLY LEU ARG VAL GLU ASP SEQRES 10 7 423 GLU GLY ASN TYR THR CYS LEU PHE VAL THR PHE PRO GLN SEQRES 11 7 423 GLY SER ARG SER VAL ASP ILE TRP LEU ARG VAL LEU ALA SEQRES 12 7 423 LYS PRO GLN ASN THR ALA GLU VAL GLN LYS VAL GLN LEU SEQRES 13 7 423 THR GLY GLU PRO VAL PRO MET ALA ARG CYS VAL SER THR SEQRES 14 7 423 GLY GLY ARG PRO PRO ALA GLN ILE THR TRP HIS SER ASP SEQRES 15 7 423 LEU GLY GLY MET PRO ASN THR SER GLN VAL PRO GLY PHE SEQRES 16 7 423 LEU SER GLY THR VAL THR VAL THR SER LEU TRP ILE LEU SEQRES 17 7 423 VAL PRO SER SER GLN VAL ASP GLY LYS ASN VAL THR CYS SEQRES 18 7 423 LYS VAL GLU HIS GLU SER PHE GLU LYS PRO GLN LEU LEU SEQRES 19 7 423 THR VAL ASN LEU THR VAL TYR TYR PRO PRO GLU VAL SER SEQRES 20 7 423 ILE SER GLY TYR ASP ASN ASN TRP TYR LEU GLY GLN ASN SEQRES 21 7 423 GLU ALA THR LEU THR CYS ASP ALA ARG SER ASN PRO GLU SEQRES 22 7 423 PRO THR GLY TYR ASN TRP SER THR THR MET GLY PRO LEU SEQRES 23 7 423 PRO PRO PHE ALA VAL ALA GLN GLY ALA GLN LEU LEU ILE SEQRES 24 7 423 ARG PRO VAL ASP LYS PRO ILE ASN THR THR LEU ILE CYS SEQRES 25 7 423 ASN VAL THR ASN ALA LEU GLY ALA ARG GLN ALA GLU LEU SEQRES 26 7 423 THR VAL GLN VAL LYS GLU GLY PRO PRO SER GLU HIS SER SEQRES 27 7 423 GLY ILE SER ARG ASN ALA ILE ILE PHE LEU VAL LEU GLY SEQRES 28 7 423 ILE LEU VAL PHE LEU ILE LEU LEU GLY ILE GLY ILE TYR SEQRES 29 7 423 PHE TYR TRP SER LYS CYS SER ARG GLU VAL LEU TRP HIS SEQRES 30 7 423 CYS HIS LEU CYS PRO SER SER THR GLU HIS ALA SER ALA SEQRES 31 7 423 SER ALA ASN GLY HIS VAL SER TYR SER ALA VAL SER ARG SEQRES 32 7 423 GLU ASN SER SER SER GLN ASP PRO GLN THR GLU GLY THR SEQRES 33 7 423 ARG HIS HIS HIS HIS HIS HIS MODRES 3J8F ASN 7 307 ASN GLYCOSYLATION SITE MODRES 3J8F ASN 7 188 ASN GLYCOSYLATION SITE MODRES 3J8F ASN 7 313 ASN GLYCOSYLATION SITE MODRES 3J8F ASN 7 120 ASN GLYCOSYLATION SITE MODRES 3J8F ASN 7 218 ASN GLYCOSYLATION SITE MODRES 3J8F ASN 7 237 ASN GLYCOSYLATION SITE MODRES 3J8F ASN 7 105 ASN GLYCOSYLATION SITE HET MYR 4 1 15 HET NAG A 1 14 HET NAG A 2 14 HET BMA A 3 11 HET NAG B 1 14 HET NAG B 2 14 HET BMA B 3 11 HET BMA B 4 11 HET FUC B 5 10 HET NAG C 1 14 HET NAG C 2 14 HET NAG D 1 14 HET NAG D 2 14 HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HET NAG F 1 14 HET NAG F 2 14 HET BMA F 3 11 HET FUC F 4 10 HET NAG 7 520 14 HETNAM MYR MYRISTIC ACID HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 4 MYR C14 H28 O2 FORMUL 6 NAG 13(C8 H15 N O6) FORMUL 6 BMA 5(C6 H12 O6) FORMUL 7 FUC 2(C6 H12 O5) HELIX 1 1 ALA 1 46 GLY 1 50 5 5 HELIX 2 2 SER 1 76 PHE 1 81 1 6 HELIX 3 3 THR 1 115 GLU 1 123 1 9 HELIX 4 4 ASP 1 172 THR 1 177 5 6 HELIX 5 5 ARG 2 43 ALA 2 47 5 5 HELIX 6 6 ASP 2 57 ARG 2 62 1 6 HELIX 7 7 LEU 2 82 ARG 2 87 1 6 HELIX 8 8 GLY 2 90 TYR 2 98 1 9 HELIX 9 9 SER 2 144 ASN 2 149 1 6 HELIX 10 10 PRO 2 150 GLY 2 154 5 5 HELIX 11 11 ASN 3 42 ILE 3 49 5 8 HELIX 12 12 THR 3 64 TYR 3 68 5 5 HELIX 13 13 THR 3 98 LEU 3 104 1 7 HELIX 14 14 ASN 3 105 TYR 3 107 5 3 HELIX 15 15 LYS 3 144 MET 3 149 1 6 HELIX 16 16 ASP 4 35 ASN 4 39 5 5 HELIX 17 17 ASP 4 49 PHE 4 53 5 5 HELIX 18 18 SER 7 211 ASP 7 215 5 5 SHEET 1 A 3 ALA 1 85 THR 1 88 0 SHEET 2 A 3 VAL 1 253 LEU 1 261 -1 O LEU 1 261 N ALA 1 85 SHEET 3 A 3 THR 1 91 ASN 1 94 -1 N VAL 1 92 O SER 1 255 SHEET 1 B 4 ALA 1 85 THR 1 88 0 SHEET 2 B 4 VAL 1 253 LEU 1 261 -1 O LEU 1 261 N ALA 1 85 SHEET 3 B 4 GLU 1 133 PHE 1 142 -1 N THR 1 135 O TYR 1 260 SHEET 4 B 4 ALA 1 192 SER 1 195 -1 O ALA 1 192 N PHE 1 136 SHEET 1 C 4 ALA 1 106 ILE 1 110 0 SHEET 2 C 4 GLY 1 238 ARG 1 243 -1 O LEU 1 240 N TRP 1 108 SHEET 3 C 4 VAL 1 154 VAL 1 160 -1 N MET 1 158 O ALA 1 241 SHEET 4 C 4 SER 1 182 THR 1 186 -1 O TYR 1 185 N TYR 1 155 SHEET 1 D 4 TYR 1 205 SER 1 206 0 SHEET 2 D 4 PHE 1 125 ARG 1 129 -1 N SER 1 128 O TYR 1 205 SHEET 3 D 4 ARG 1 267 PRO 1 271 -1 O CYS 1 270 N THR 1 126 SHEET 4 D 4 GLU 3 39 VAL 3 40 -1 O VAL 3 40 N VAL 1 268 SHEET 1 E 3 TYR 2 64 THR 2 65 0 SHEET 2 E 3 ILE 2 247 ILE 2 253 -1 O ILE 2 253 N TYR 2 64 SHEET 3 E 3 VAL 2 69 TRP 2 71 -1 N VAL 2 69 O ILE 2 249 SHEET 1 F 4 TYR 2 64 THR 2 65 0 SHEET 2 F 4 ILE 2 247 ILE 2 253 -1 O ILE 2 253 N TYR 2 64 SHEET 3 F 4 TYR 2 106 GLN 2 111 -1 N GLN 2 111 O THR 2 250 SHEET 4 F 4 CYS 2 205 LEU 2 210 -1 O LEU 2 210 N TYR 2 106 SHEET 1 G 4 TRP 2 78 TRP 2 79 0 SHEET 2 G 4 TRP 2 227 ASN 2 238 -1 O ILE 2 231 N TRP 2 78 SHEET 3 G 4 GLN 2 119 PRO 2 128 -1 N ALA 2 121 O LEU 2 234 SHEET 4 G 4 HIS 2 195 ASN 2 199 -1 O ILE 2 198 N LEU 2 122 SHEET 1 H 2 HIS 2 99 ARG 2 103 0 SHEET 2 H 2 GLU 2 259 LEU 2 263 -1 O ASN 2 261 N LEU 2 101 SHEET 1 I 3 THR 3 51 MET 3 52 0 SHEET 2 I 3 ASP 3 209 ALA 3 216 -1 O VAL 3 214 N THR 3 51 SHEET 3 I 3 VAL 3 70 ARG 3 71 -1 N VAL 3 70 O ILE 3 210 SHEET 1 J 4 THR 3 51 MET 3 52 0 SHEET 2 J 4 ASP 3 209 ALA 3 216 -1 O VAL 3 214 N THR 3 51 SHEET 3 J 4 LEU 3 114 CYS 3 121 -1 N LYS 3 115 O SER 3 215 SHEET 4 J 4 SER 3 163 VAL 3 168 -1 O VAL 3 168 N LEU 3 114 SHEET 1 K 2 HIS 3 109 ALA 3 111 0 SHEET 2 K 2 SER 3 221 ARG 3 223 -1 O ARG 3 223 N HIS 3 109 SHEET 1 L 3 THR 3 152 ASP 3 157 0 SHEET 2 L 3 LYS 3 129 ALA 3 135 -1 N TYR 3 134 O THR 3 152 SHEET 3 L 3 TYR 3 189 TYR 3 194 -1 O PHE 3 193 N LEU 3 131 SHEET 1 M 2 SER 4 6 SER 4 7 0 SHEET 2 M 2 ASN 4 26 TYR 4 27 -1 O TYR 4 27 N SER 4 6 SHEET 1 N 2 THR 7 46 LEU 7 47 0 SHEET 2 N 2 LEU 7 108 ARG 7 109 -1 O LEU 7 108 N LEU 7 47 SHEET 1 O 4 VAL 7 77 HIS 7 79 0 SHEET 2 O 4 HIS 7 60 THR 7 65 -1 N LEU 7 64 O PHE 7 78 SHEET 3 O 4 GLY 7 119 PHE 7 128 -1 O PHE 7 128 N HIS 7 60 SHEET 4 O 4 GLY 7 131 LEU 7 139 -1 O LEU 7 139 N GLY 7 119 SHEET 1 P 4 GLN 7 146 THR 7 148 0 SHEET 2 P 4 VAL 7 161 GLY 7 171 -1 O VAL 7 167 N THR 7 148 SHEET 3 P 4 VAL 7 200 LEU 7 208 -1 O TRP 7 206 N ALA 7 164 SHEET 4 P 4 MET 7 186 PRO 7 193 -1 N SER 7 190 O THR 7 203 SHEET 1 Q 3 GLN 7 176 HIS 7 180 0 SHEET 2 Q 3 ASN 7 218 GLU 7 224 -1 O LYS 7 222 N THR 7 178 SHEET 3 Q 3 GLN 7 232 ASN 7 237 -1 O LEU 7 234 N CYS 7 221 SHEET 1 R 4 TYR 7 242 SER 7 249 0 SHEET 2 R 4 ALA 7 262 ASN 7 271 -1 O THR 7 265 N SER 7 249 SHEET 3 R 4 GLN 7 296 ILE 7 299 -1 O ILE 7 299 N ALA 7 262 SHEET 4 R 4 ALA 7 290 GLN 7 293 -1 N GLN 7 293 O GLN 7 296 SHEET 1 S 3 GLY 7 276 THR 7 281 0 SHEET 2 S 3 ASN 7 307 THR 7 315 -1 O THR 7 315 N GLY 7 276 SHEET 3 S 3 ALA 7 320 GLN 7 328 -1 O LEU 7 325 N LEU 7 310 SSBOND 1 CYS 7 49 CYS 7 123 1555 1555 2.06 SSBOND 2 CYS 7 166 CYS 7 221 1555 1555 2.04 SSBOND 3 CYS 7 266 CYS 7 312 1555 1555 2.04 LINK C1 MYR 4 1 N GLY 4 2 1555 1555 1.33 LINK ND2 ASN 7 105 C1 NAG A 1 1555 1555 1.45 LINK ND2 ASN 7 120 C1 NAG B 1 1555 1555 1.44 LINK ND2 ASN 7 188 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN 7 218 C1 NAG D 1 1555 1555 1.45 LINK ND2 ASN 7 237 C1 NAG E 1 1555 1555 1.45 LINK ND2 ASN 7 307 C1 NAG F 1 1555 1555 1.44 LINK ND2 ASN 7 313 C1 NAG 7 520 1555 1555 1.44 LINK O4 NAG A 1 C1 NAG A 2 1555 1555 1.44 LINK O4 NAG A 2 C1 BMA A 3 1555 1555 1.44 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.44 LINK O6 NAG B 1 C1 FUC B 5 1555 1555 1.44 LINK O4 NAG B 2 C1 BMA B 3 1555 1555 1.44 LINK O3 BMA B 3 C1 BMA B 4 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.44 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.44 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.44 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.44 LINK O6 NAG F 1 C1 FUC F 4 1555 1555 1.44 LINK O4 NAG F 2 C1 BMA F 3 1555 1555 1.44 CISPEP 1 PRO 7 38 GLY 7 39 0 0.08 CISPEP 2 PHE 7 128 PRO 7 129 0 0.02 CISPEP 3 ARG 7 172 PRO 7 173 0 -0.01 CISPEP 4 ASN 7 271 PRO 7 272 0 0.00 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000