HEADER SUGAR BINDING PROTEIN 04-SEP-09 3JQ1 TITLE CRYSTAL STRUCTURE OF SUSD SUPERFAMILY PROTEIN (YP_001297730.1) FROM TITLE 2 BACTEROIDES VULGATUS ATCC 8482 AT 1.55 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUSD SUPERFAMILY PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: SEQUENCE DATABASE RESIDUES 34-513; COMPND 5 SYNONYM: PUTATIVE OUTER MEMBRANE PROTEIN, PROBABLY INVOLVED IN COMPND 6 NUTRIENT BINDING; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES VULGATUS ATCC 8482; SOURCE 3 ORGANISM_TAXID: 435590; SOURCE 4 ATCC: 8482 / DSM 1447 / NCTC 11154; SOURCE 5 GENE: BVU_0390, YP_001297730.1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS YP_001297730.1, SUSD SUPERFAMILY PROTEIN, STRUCTURAL GENOMICS, JOINT KEYWDS 2 CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, KEYWDS 3 PSI-2, RAGB, SUSD AND HYPOTHETICAL PROTEINS, SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 5 01-FEB-23 3JQ1 1 REMARK SEQADV LINK REVDAT 4 24-JUL-19 3JQ1 1 REMARK LINK REVDAT 3 25-OCT-17 3JQ1 1 REMARK REVDAT 2 13-JUL-11 3JQ1 1 VERSN REVDAT 1 22-SEP-09 3JQ1 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF SUSD SUPERFAMILY PROTEIN JRNL TITL 2 (YP_001297730.1) FROM BACTEROIDES VULGATUS ATCC 8482 AT 1.55 JRNL TITL 3 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0053 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.49 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 146527 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 7345 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.59 REMARK 3 REFLECTION IN BIN (WORKING SET) : 10312 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.19 REMARK 3 BIN R VALUE (WORKING SET) : 0.2520 REMARK 3 BIN FREE R VALUE SET COUNT : 523 REMARK 3 BIN FREE R VALUE : 0.3040 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7618 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 38 REMARK 3 SOLVENT ATOMS : 1475 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 14.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.87 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.15000 REMARK 3 B33 (A**2) : -0.15000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.083 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.086 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.056 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.343 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.934 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8061 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 5554 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10971 ; 1.527 ; 1.939 REMARK 3 BOND ANGLES OTHERS (DEGREES): 13482 ; 0.956 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 991 ; 5.796 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 437 ;35.466 ;24.554 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1374 ;12.507 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 47 ;19.756 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1130 ; 0.100 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 9100 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1756 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4726 ; 0.864 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1892 ; 0.277 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 7647 ; 1.432 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3335 ; 2.278 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3288 ; 3.475 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 37 A 513 REMARK 3 ORIGIN FOR THE GROUP (A): 23.8388 71.5710 60.6030 REMARK 3 T TENSOR REMARK 3 T11: 0.0199 T22: 0.0013 REMARK 3 T33: 0.0056 T12: -0.0003 REMARK 3 T13: 0.0057 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 0.4068 L22: 0.1718 REMARK 3 L33: 0.3666 L12: 0.0664 REMARK 3 L13: -0.0196 L23: -0.0101 REMARK 3 S TENSOR REMARK 3 S11: 0.0027 S12: -0.0163 S13: -0.0317 REMARK 3 S21: 0.0230 S22: -0.0031 S23: -0.0038 REMARK 3 S31: 0.0456 S32: 0.0126 S33: 0.0004 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 37 B 513 REMARK 3 ORIGIN FOR THE GROUP (A): 22.0285 66.2677 17.7467 REMARK 3 T TENSOR REMARK 3 T11: 0.0007 T22: 0.0055 REMARK 3 T33: 0.0043 T12: 0.0009 REMARK 3 T13: 0.0015 T23: 0.0032 REMARK 3 L TENSOR REMARK 3 L11: 0.3110 L22: 0.1759 REMARK 3 L33: 0.2884 L12: 0.0222 REMARK 3 L13: -0.0688 L23: 0.0225 REMARK 3 S TENSOR REMARK 3 S11: -0.0012 S12: 0.0014 S13: 0.0106 REMARK 3 S21: 0.0068 S22: 0.0006 S23: 0.0165 REMARK 3 S31: 0.0050 S32: -0.0203 S33: 0.0006 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR REMARK 3 SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE REMARK 3 OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 3. ATOM RECORDS CONTAIN RESIDUAL B FACTORS ONLY. REMARK 3 4. ETHYLENE GLYCOLS (EDO),CALCIUM (CA) AND CHLORIDE (CL) REMARK 3 MODELLED ARE PRESENT IN CRYSTALLIZATION/CRYO CONDITIONS. REMARK 4 REMARK 4 3JQ1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-SEP-09. REMARK 100 THE DEPOSITION ID IS D_1000055014. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-MAY-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91162,0.97956,0.97938 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : FLAT MIRROR, VERTICAL AND REMARK 200 HORIZONTAL FOCUSSING MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.5 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 146647 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 29.488 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.10500 REMARK 200 R SYM (I) : 0.10500 REMARK 200 FOR THE DATA SET : 8.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.69300 REMARK 200 R SYM FOR SHELL (I) : 0.69300 REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2000M CACL2, 20.0000% PEG-3350, NO REMARK 280 BUFFER PH 5.1, NANODROP, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.82500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 82.52100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.34500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 82.52100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.82500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.34500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: ANALYTICAL SIZE EXCLUSION CHROMATOGRAPHY SUPPORTS THE REMARK 300 ASSIGNMENT OF A MONOMER AS THE SIGNIFICANT OLIGOMERIZATION REMARK 300 STATE IN SOLUTION. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 33 REMARK 465 THR A 34 REMARK 465 GLU A 35 REMARK 465 ASP A 36 REMARK 465 GLY A 275 REMARK 465 GLY A 276 REMARK 465 THR A 277 REMARK 465 ASP A 278 REMARK 465 LEU A 279 REMARK 465 GLY A 281 REMARK 465 ASP A 282 REMARK 465 GLY A 283 REMARK 465 GLU A 284 REMARK 465 ASN A 285 REMARK 465 ILE A 286 REMARK 465 ASN A 287 REMARK 465 SER A 288 REMARK 465 THR A 289 REMARK 465 GLN A 290 REMARK 465 GLY B 33 REMARK 465 THR B 34 REMARK 465 GLU B 35 REMARK 465 ASP B 36 REMARK 465 GLY B 275 REMARK 465 GLY B 276 REMARK 465 THR B 277 REMARK 465 ASP B 278 REMARK 465 LEU B 279 REMARK 465 GLY B 281 REMARK 465 ASP B 282 REMARK 465 GLY B 283 REMARK 465 GLU B 284 REMARK 465 ASN B 285 REMARK 465 ILE B 286 REMARK 465 ASN B 287 REMARK 465 SER B 288 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 37 OG1 CG2 REMARK 470 GLU A 130 CG CD OE1 OE2 REMARK 470 GLN A 170 CG CD OE1 NE2 REMARK 470 SER A 171 OG REMARK 470 LYS A 194 NZ REMARK 470 VAL A 274 CG1 CG2 REMARK 470 ASN A 487 CG OD1 ND2 REMARK 470 THR B 37 OG1 CG2 REMARK 470 GLU B 130 CG CD OE1 OE2 REMARK 470 ALA B 168 CB REMARK 470 SER B 173 OG REMARK 470 VAL B 274 CG1 CG2 REMARK 470 THR B 289 CB OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 989 O HOH A 1327 2.17 REMARK 500 O HOH A 735 O HOH A 1131 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 268 CB GLU A 268 CG -0.134 REMARK 500 GLU B 268 CB GLU B 268 CG -0.165 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 332 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG A 455 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG A 461 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ASP B 358 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 38 -168.13 -102.95 REMARK 500 ALA A 77 -151.52 -96.34 REMARK 500 LYS A 160 -84.70 68.31 REMARK 500 LYS A 160 -83.53 67.11 REMARK 500 TYR A 307 50.64 39.14 REMARK 500 ASN A 370 37.45 -94.55 REMARK 500 VAL A 451 28.98 47.85 REMARK 500 ASP A 486 -145.26 50.27 REMARK 500 ALA B 77 -151.19 -98.32 REMARK 500 LYS B 160 -86.10 69.35 REMARK 500 TYR B 307 50.78 37.41 REMARK 500 ASN B 370 38.38 -89.29 REMARK 500 ASP B 486 -125.72 56.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 2 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 471 O REMARK 620 2 HOH A 520 O 89.0 REMARK 620 3 HOH A 563 O 144.9 92.2 REMARK 620 4 HOH A 701 O 138.1 79.9 76.3 REMARK 620 5 HOH A 703 O 69.1 112.5 140.3 78.1 REMARK 620 6 HOH A 882 O 72.4 80.0 73.3 142.6 139.0 REMARK 620 7 HOH A 959 O 88.8 165.4 81.3 111.0 80.1 85.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 5 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 200 O REMARK 620 2 GLN A 211 OE1 82.5 REMARK 620 3 HOH A 824 O 84.6 83.9 REMARK 620 4 HOH A 868 O 83.6 129.1 142.7 REMARK 620 5 HOH A 869 O 124.3 76.2 141.2 72.2 REMARK 620 6 HOH A1136 O 90.3 157.1 73.8 71.0 124.9 REMARK 620 7 HOH A1286 O 166.4 100.8 82.6 103.9 69.2 81.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 6 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 102 OG REMARK 620 2 HOH A 559 O 79.8 REMARK 620 3 HOH A 630 O 80.5 142.8 REMARK 620 4 HOH A 712 O 79.3 74.6 71.0 REMARK 620 5 HOH A 735 O 128.5 142.5 73.0 128.6 REMARK 620 6 HOH A1126 O 113.3 71.3 145.9 140.3 74.3 REMARK 620 7 HOH A1131 O 79.5 122.9 83.6 149.1 54.8 69.5 REMARK 620 8 HOH A1295 O 156.0 93.3 92.1 76.7 69.3 85.5 122.7 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 7 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 257 OD1 REMARK 620 2 GLU A 260 OE1 86.1 REMARK 620 3 GLU A 260 OE2 91.2 53.3 REMARK 620 4 PHE A 384 O 92.9 129.9 76.7 REMARK 620 5 HOH A 553 O 85.7 149.2 156.4 80.1 REMARK 620 6 HOH A 562 O 171.6 91.8 94.1 94.6 92.0 REMARK 620 7 HOH B 558 O 88.4 74.4 127.5 155.7 75.8 83.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 1 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 515 O REMARK 620 2 ASP B 257 OD1 87.2 REMARK 620 3 GLU B 260 OE1 75.3 84.1 REMARK 620 4 GLU B 260 OE2 128.3 91.1 53.2 REMARK 620 5 PHE B 384 O 152.7 95.0 132.0 78.9 REMARK 620 6 HOH B 514 O 83.4 170.6 92.4 93.9 93.8 REMARK 620 7 HOH B 585 O 75.0 85.7 149.0 156.4 78.0 92.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 3 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 EDO B 26 O1 REMARK 620 2 EDO B 26 O2 67.5 REMARK 620 3 GLU B 466 OE1 124.3 74.6 REMARK 620 4 HOH B 828 O 139.7 85.1 71.2 REMARK 620 5 HOH B 869 O 78.3 105.5 74.2 139.5 REMARK 620 6 HOH B 881 O 76.8 79.2 133.8 69.3 150.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 4 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU B 200 O REMARK 620 2 GLN B 211 OE1 84.9 REMARK 620 3 HOH B 590 O 88.2 82.5 REMARK 620 4 HOH B 694 O 81.7 127.0 147.4 REMARK 620 5 HOH B 958 O 123.0 74.7 138.4 70.7 REMARK 620 6 HOH B 983 O 84.8 156.2 75.8 72.4 128.5 REMARK 620 7 HOH B1236 O 168.6 93.4 80.4 108.0 67.0 92.4 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 8 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 102 OG REMARK 620 2 HOH B 653 O 79.1 REMARK 620 3 HOH B 718 O 123.9 119.8 REMARK 620 4 HOH B 777 O 82.7 78.2 148.7 REMARK 620 5 HOH B 803 O 74.6 71.6 65.2 145.0 REMARK 620 6 HOH B 940 O 153.4 74.4 71.0 92.2 96.3 REMARK 620 7 HOH B1133 O 126.6 133.0 80.9 68.9 146.0 74.3 REMARK 620 8 HOH B1140 O 67.2 146.2 81.1 97.1 98.1 139.4 72.6 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 9 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 550 O REMARK 620 2 HOH B 804 O 114.0 REMARK 620 3 HOH B 824 O 75.6 169.5 REMARK 620 4 HOH B 849 O 151.0 82.4 87.1 REMARK 620 5 HOH B 926 O 121.6 98.1 79.3 76.3 REMARK 620 6 HOH B1045 O 75.7 92.2 86.0 80.1 152.6 REMARK 620 7 HOH B1071 O 67.7 76.1 112.7 141.3 75.4 131.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 10 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY B 327 O REMARK 620 2 HOH B1108 O 82.9 REMARK 620 3 HOH B1164 O 85.9 81.9 REMARK 620 4 HOH B1377 O 78.4 73.7 152.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 11 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 471 O REMARK 620 2 HOH B 769 O 76.3 REMARK 620 3 HOH B1279 O 75.2 80.0 REMARK 620 4 HOH B1306 O 63.8 136.3 104.8 REMARK 620 5 HOH B1471 O 85.3 99.0 160.2 62.3 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 6 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 7 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 12 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 14 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 17 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 19 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 20 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 21 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 22 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 23 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 25 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 8 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 9 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 10 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 11 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 13 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 15 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 16 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 18 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 24 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 26 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 396548 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT (RESIDUES 34-513) WAS EXPRESSED WITH A PURIFICATION REMARK 999 TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 3JQ1 A 34 513 UNP A6KXE4 A6KXE4_BACV8 34 513 DBREF 3JQ1 B 34 513 UNP A6KXE4 A6KXE4_BACV8 34 513 SEQADV 3JQ1 GLY A 33 UNP A6KXE4 EXPRESSION TAG SEQADV 3JQ1 GLY B 33 UNP A6KXE4 EXPRESSION TAG SEQRES 1 A 481 GLY THR GLU ASP THR PHE TRP LYS ASP GLU THR ASP PHE SEQRES 2 A 481 ASN LEU ALA LEU THR SER CYS TYR THR PRO LEU LYS ASN SEQRES 3 A 481 ALA LEU ASN GLY GLY TYR TYR GLY THR ARG GLY VAL MSE SEQRES 4 A 481 LEU ARG ILE ALA ARG ALA ASP GLU VAL ASP PHE ARG ASN SEQRES 5 A 481 ASP ILE SER ASP VAL TYR THR VAL ASN ARG PHE THR ASN SEQRES 6 A 481 SER ASN THR ASN SER LEU THR GLN GLY MSE PHE TYR GLN SEQRES 7 A 481 PHE TYR ASN ALA LEU TYR ARG THR ASN SER ILE MSE GLN SEQRES 8 A 481 LYS LEU GLU GLU LYS LYS GLU GLN PHE SER THR ASP PHE SEQRES 9 A 481 GLN ASN SER VAL LYS GLY GLU CYS LEU PHE ILE ARG GLY SEQRES 10 A 481 PHE TYR LEU PHE GLN LEU ALA LYS GLU PHE LYS ASP ALA SEQRES 11 A 481 PRO LEU ARG LEU THR ALA SER GLN SER PRO SER THR PHE SEQRES 12 A 481 PRO LEU ALA LYS SER SER GLN ALA ASP ILE TRP ALA GLN SEQRES 13 A 481 ALA LYS GLU ASP LEU LYS THR ALA ALA SER LEU LEU PRO SEQRES 14 A 481 ILE THR ASN LYS ILE GLY LYS PRO THR GLN GLY ALA ALA SEQRES 15 A 481 TYR ALA ALA LEU GLY LYS ILE TYR VAL TYR GLU GLU ASN SEQRES 16 A 481 TRP GLN GLU ALA ILE ASN VAL LEU GLU PRO LEU THR GLN SEQRES 17 A 481 ASN PRO TYR THR TYR LYS LEU VAL GLU ASP PHE ASN TRP SEQRES 18 A 481 ASN PHE ASP ASP THR HIS GLU ASN ASN ALA GLU SER ILE SEQRES 19 A 481 PHE GLU LEU LEU ILE GLU ASP VAL GLY GLY THR ASP LEU SEQRES 20 A 481 TRP GLY ASP GLY GLU ASN ILE ASN SER THR GLN SER ASN SEQRES 21 A 481 THR ARG PRO LYS GLU TYR ALA ALA ALA GLU VAL GLY GLY SEQRES 22 A 481 TRP TYR GLU ALA ASN PRO THR GLN GLN ILE MSE ASP ILE SEQRES 23 A 481 PHE TRP LYS GLU LYS ASP LYS ASP GLY ASN PHE ASP TYR SEQRES 24 A 481 ARG ALA ARG CYS SER VAL ALA TRP ASP TYR GLU GLY CYS SEQRES 25 A 481 THR TYR TYR GLN ARG PRO PHE ARG GLU VAL PHE ALA GLN SEQRES 26 A 481 ASP LYS TRP LYS THR TYR TRP ILE LEU LYS TYR GLN ASN SEQRES 27 A 481 TRP LYS THR GLN LYS ASP GLU PRO ALA PRO PRO LYS SER SEQRES 28 A 481 PHE ILE ASN GLU ARG ALA ILE ARG TYR ALA ASP VAL LEU SEQRES 29 A 481 LEU MSE LEU ALA GLU ALA TYR MSE ASN LYS GLY ALA LEU SEQRES 30 A 481 ASP THR SER ILE GLY TYR ILE ASN GLN ILE ARG ARG ARG SEQRES 31 A 481 ALA ASN LEU ASN ASP TYR SER GLY PRO ILE THR LYS GLU SEQRES 32 A 481 GLY VAL PHE GLU ASP LEU VAL HIS GLN ARG ALA ILE GLU SEQRES 33 A 481 PHE PHE VAL GLU GLY GLU ARG PHE TYR ASP LEU ARG ARG SEQRES 34 A 481 TRP GLY LEU LEU GLU GLN THR LEU LYS THR CYS ASP ASP SEQRES 35 A 481 THR ARG TYR LYS ASN TYR GLN THR GLY LYS SER ASP ASN SEQRES 36 A 481 ILE ASN LYS PHE ASN TYR PHE PRO ILE PRO ALA LYS GLU SEQRES 37 A 481 LEU ASP THR ASN PRO LEU CYS THR PRO SER GLU GLY TRP SEQRES 1 B 481 GLY THR GLU ASP THR PHE TRP LYS ASP GLU THR ASP PHE SEQRES 2 B 481 ASN LEU ALA LEU THR SER CYS TYR THR PRO LEU LYS ASN SEQRES 3 B 481 ALA LEU ASN GLY GLY TYR TYR GLY THR ARG GLY VAL MSE SEQRES 4 B 481 LEU ARG ILE ALA ARG ALA ASP GLU VAL ASP PHE ARG ASN SEQRES 5 B 481 ASP ILE SER ASP VAL TYR THR VAL ASN ARG PHE THR ASN SEQRES 6 B 481 SER ASN THR ASN SER LEU THR GLN GLY MSE PHE TYR GLN SEQRES 7 B 481 PHE TYR ASN ALA LEU TYR ARG THR ASN SER ILE MSE GLN SEQRES 8 B 481 LYS LEU GLU GLU LYS LYS GLU GLN PHE SER THR ASP PHE SEQRES 9 B 481 GLN ASN SER VAL LYS GLY GLU CYS LEU PHE ILE ARG GLY SEQRES 10 B 481 PHE TYR LEU PHE GLN LEU ALA LYS GLU PHE LYS ASP ALA SEQRES 11 B 481 PRO LEU ARG LEU THR ALA SER GLN SER PRO SER THR PHE SEQRES 12 B 481 PRO LEU ALA LYS SER SER GLN ALA ASP ILE TRP ALA GLN SEQRES 13 B 481 ALA LYS GLU ASP LEU LYS THR ALA ALA SER LEU LEU PRO SEQRES 14 B 481 ILE THR ASN LYS ILE GLY LYS PRO THR GLN GLY ALA ALA SEQRES 15 B 481 TYR ALA ALA LEU GLY LYS ILE TYR VAL TYR GLU GLU ASN SEQRES 16 B 481 TRP GLN GLU ALA ILE ASN VAL LEU GLU PRO LEU THR GLN SEQRES 17 B 481 ASN PRO TYR THR TYR LYS LEU VAL GLU ASP PHE ASN TRP SEQRES 18 B 481 ASN PHE ASP ASP THR HIS GLU ASN ASN ALA GLU SER ILE SEQRES 19 B 481 PHE GLU LEU LEU ILE GLU ASP VAL GLY GLY THR ASP LEU SEQRES 20 B 481 TRP GLY ASP GLY GLU ASN ILE ASN SER THR GLN SER ASN SEQRES 21 B 481 THR ARG PRO LYS GLU TYR ALA ALA ALA GLU VAL GLY GLY SEQRES 22 B 481 TRP TYR GLU ALA ASN PRO THR GLN GLN ILE MSE ASP ILE SEQRES 23 B 481 PHE TRP LYS GLU LYS ASP LYS ASP GLY ASN PHE ASP TYR SEQRES 24 B 481 ARG ALA ARG CYS SER VAL ALA TRP ASP TYR GLU GLY CYS SEQRES 25 B 481 THR TYR TYR GLN ARG PRO PHE ARG GLU VAL PHE ALA GLN SEQRES 26 B 481 ASP LYS TRP LYS THR TYR TRP ILE LEU LYS TYR GLN ASN SEQRES 27 B 481 TRP LYS THR GLN LYS ASP GLU PRO ALA PRO PRO LYS SER SEQRES 28 B 481 PHE ILE ASN GLU ARG ALA ILE ARG TYR ALA ASP VAL LEU SEQRES 29 B 481 LEU MSE LEU ALA GLU ALA TYR MSE ASN LYS GLY ALA LEU SEQRES 30 B 481 ASP THR SER ILE GLY TYR ILE ASN GLN ILE ARG ARG ARG SEQRES 31 B 481 ALA ASN LEU ASN ASP TYR SER GLY PRO ILE THR LYS GLU SEQRES 32 B 481 GLY VAL PHE GLU ASP LEU VAL HIS GLN ARG ALA ILE GLU SEQRES 33 B 481 PHE PHE VAL GLU GLY GLU ARG PHE TYR ASP LEU ARG ARG SEQRES 34 B 481 TRP GLY LEU LEU GLU GLN THR LEU LYS THR CYS ASP ASP SEQRES 35 B 481 THR ARG TYR LYS ASN TYR GLN THR GLY LYS SER ASP ASN SEQRES 36 B 481 ILE ASN LYS PHE ASN TYR PHE PRO ILE PRO ALA LYS GLU SEQRES 37 B 481 LEU ASP THR ASN PRO LEU CYS THR PRO SER GLU GLY TRP MODRES 3JQ1 MSE A 71 MET SELENOMETHIONINE MODRES 3JQ1 MSE A 107 MET SELENOMETHIONINE MODRES 3JQ1 MSE A 122 MET SELENOMETHIONINE MODRES 3JQ1 MSE A 316 MET SELENOMETHIONINE MODRES 3JQ1 MSE A 398 MET SELENOMETHIONINE MODRES 3JQ1 MSE A 404 MET SELENOMETHIONINE MODRES 3JQ1 MSE B 71 MET SELENOMETHIONINE MODRES 3JQ1 MSE B 107 MET SELENOMETHIONINE MODRES 3JQ1 MSE B 122 MET SELENOMETHIONINE MODRES 3JQ1 MSE B 316 MET SELENOMETHIONINE MODRES 3JQ1 MSE B 398 MET SELENOMETHIONINE MODRES 3JQ1 MSE B 404 MET SELENOMETHIONINE HET MSE A 71 8 HET MSE A 107 8 HET MSE A 122 13 HET MSE A 316 8 HET MSE A 398 8 HET MSE A 404 13 HET MSE B 71 8 HET MSE B 107 8 HET MSE B 122 13 HET MSE B 316 8 HET MSE B 398 8 HET MSE B 404 13 HET CA A 2 1 HET CA A 5 1 HET CA A 6 1 HET CA A 7 1 HET CL A 12 1 HET CL A 14 1 HET CL A 17 1 HET CL A 19 1 HET CL A 20 1 HET CL A 21 1 HET CL A 22 1 HET EDO A 23 4 HET EDO A 25 4 HET CA B 1 1 HET CA B 3 1 HET CA B 4 1 HET CA B 8 1 HET CA B 9 1 HET CA B 10 1 HET CA B 11 1 HET CL B 13 1 HET CL B 15 1 HET CL B 16 1 HET CL B 18 1 HET EDO B 24 4 HET EDO B 26 4 HETNAM MSE SELENOMETHIONINE HETNAM CA CALCIUM ION HETNAM CL CHLORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 3 CA 11(CA 2+) FORMUL 7 CL 11(CL 1-) FORMUL 14 EDO 4(C2 H6 O2) FORMUL 29 HOH *1475(H2 O) HELIX 1 1 ASP A 41 CYS A 52 1 12 HELIX 2 2 TYR A 53 ASN A 58 1 6 HELIX 3 3 GLY A 66 ALA A 75 1 10 HELIX 4 4 ILE A 86 ARG A 94 1 9 HELIX 5 5 ASN A 101 LYS A 129 1 29 HELIX 6 6 GLU A 130 PHE A 132 5 3 HELIX 7 7 SER A 133 LYS A 160 1 28 HELIX 8 8 SER A 181 LEU A 200 1 20 HELIX 9 9 THR A 210 GLU A 225 1 16 HELIX 10 10 ASN A 227 GLU A 236 1 10 HELIX 11 11 PRO A 237 GLN A 240 5 4 HELIX 12 12 ASP A 250 ASP A 256 5 7 HELIX 13 13 THR A 293 ALA A 299 1 7 HELIX 14 14 ALA A 300 GLY A 304 5 5 HELIX 15 15 THR A 312 LYS A 321 1 10 HELIX 16 16 ASP A 330 SER A 336 1 7 HELIX 17 17 PHE A 351 PHE A 355 1 5 HELIX 18 18 ALA A 356 TRP A 360 5 5 HELIX 19 19 TYR A 392 GLY A 407 1 16 HELIX 20 20 ALA A 408 ALA A 423 1 16 HELIX 21 21 THR A 433 PHE A 449 1 17 HELIX 22 22 GLU A 454 TRP A 462 1 9 HELIX 23 23 LEU A 464 THR A 471 1 8 HELIX 24 24 ASP A 473 THR A 482 1 10 HELIX 25 25 PHE A 491 TYR A 493 5 3 HELIX 26 26 PRO A 497 ASN A 504 1 8 HELIX 27 27 ASP B 41 CYS B 52 1 12 HELIX 28 28 TYR B 53 ASN B 58 1 6 HELIX 29 29 GLY B 66 ALA B 75 1 10 HELIX 30 30 ILE B 86 ARG B 94 1 9 HELIX 31 31 ASN B 101 LYS B 128 1 28 HELIX 32 32 LYS B 129 PHE B 132 5 4 HELIX 33 33 SER B 133 LYS B 160 1 28 HELIX 34 34 SER B 181 LEU B 200 1 20 HELIX 35 35 THR B 210 GLU B 225 1 16 HELIX 36 36 ASN B 227 GLU B 236 1 10 HELIX 37 37 PRO B 237 GLN B 240 5 4 HELIX 38 38 ASP B 250 ASP B 256 5 7 HELIX 39 39 THR B 293 ALA B 299 1 7 HELIX 40 40 ALA B 300 GLY B 304 5 5 HELIX 41 41 THR B 312 LYS B 321 1 10 HELIX 42 42 ASP B 330 SER B 336 1 7 HELIX 43 43 PHE B 351 PHE B 355 1 5 HELIX 44 44 ALA B 356 TRP B 360 5 5 HELIX 45 45 TYR B 392 GLY B 407 1 16 HELIX 46 46 ALA B 408 ALA B 423 1 16 HELIX 47 47 THR B 433 PHE B 449 1 17 HELIX 48 48 GLU B 454 TRP B 462 1 9 HELIX 49 49 LEU B 464 ASP B 473 1 10 HELIX 50 50 ASP B 473 THR B 482 1 10 HELIX 51 51 PHE B 491 TYR B 493 5 3 HELIX 52 52 PRO B 497 ASN B 504 1 8 SHEET 1 A 2 VAL A 80 PHE A 82 0 SHEET 2 A 2 ALA A 309 PRO A 311 -1 O ASN A 310 N ASP A 81 SHEET 1 B 2 SER A 265 LEU A 269 0 SHEET 2 B 2 GLU A 387 ARG A 391 -1 O GLU A 387 N LEU A 269 SHEET 1 C 2 VAL A 337 ALA A 338 0 SHEET 2 C 2 TRP A 364 ILE A 365 -1 O TRP A 364 N ALA A 338 SHEET 1 D 2 THR A 345 TYR A 346 0 SHEET 2 D 2 ARG A 349 PRO A 350 -1 O ARG A 349 N TYR A 346 SHEET 1 E 2 LYS A 484 SER A 485 0 SHEET 2 E 2 ILE A 488 ASN A 489 -1 O ILE A 488 N SER A 485 SHEET 1 F 2 VAL B 80 PHE B 82 0 SHEET 2 F 2 ALA B 309 PRO B 311 -1 O ASN B 310 N ASP B 81 SHEET 1 G 2 SER B 265 LEU B 269 0 SHEET 2 G 2 GLU B 387 ARG B 391 -1 O ILE B 390 N ILE B 266 SHEET 1 H 2 VAL B 337 ALA B 338 0 SHEET 2 H 2 TRP B 364 ILE B 365 -1 O TRP B 364 N ALA B 338 SHEET 1 I 2 THR B 345 TYR B 346 0 SHEET 2 I 2 ARG B 349 PRO B 350 -1 O ARG B 349 N TYR B 346 SHEET 1 J 2 LYS B 484 SER B 485 0 SHEET 2 J 2 ILE B 488 ASN B 489 -1 O ILE B 488 N SER B 485 LINK C VAL A 70 N MSE A 71 1555 1555 1.32 LINK C MSE A 71 N LEU A 72 1555 1555 1.32 LINK C GLY A 106 N MSE A 107 1555 1555 1.33 LINK C MSE A 107 N PHE A 108 1555 1555 1.33 LINK C ILE A 121 N MSE A 122 1555 1555 1.34 LINK C MSE A 122 N GLN A 123 1555 1555 1.34 LINK C ILE A 315 N MSE A 316 1555 1555 1.33 LINK C MSE A 316 N ASP A 317 1555 1555 1.33 LINK C LEU A 397 N MSE A 398 1555 1555 1.34 LINK C MSE A 398 N LEU A 399 1555 1555 1.33 LINK C TYR A 403 N MSE A 404 1555 1555 1.34 LINK C MSE A 404 N ASN A 405 1555 1555 1.32 LINK C VAL B 70 N MSE B 71 1555 1555 1.31 LINK C MSE B 71 N LEU B 72 1555 1555 1.33 LINK C GLY B 106 N MSE B 107 1555 1555 1.31 LINK C MSE B 107 N PHE B 108 1555 1555 1.34 LINK C ILE B 121 N MSE B 122 1555 1555 1.34 LINK C MSE B 122 N GLN B 123 1555 1555 1.32 LINK C ILE B 315 N MSE B 316 1555 1555 1.32 LINK C MSE B 316 N ASP B 317 1555 1555 1.33 LINK C LEU B 397 N MSE B 398 1555 1555 1.32 LINK C MSE B 398 N LEU B 399 1555 1555 1.33 LINK C TYR B 403 N MSE B 404 1555 1555 1.34 LINK C MSE B 404 N ASN B 405 1555 1555 1.32 LINK CA CA A 2 O THR A 471 1555 1555 2.42 LINK CA CA A 2 O HOH A 520 1555 1555 2.31 LINK CA CA A 2 O HOH A 563 1555 1555 2.45 LINK CA CA A 2 O HOH A 701 1555 1555 2.54 LINK CA CA A 2 O HOH A 703 1555 1555 2.50 LINK CA CA A 2 O HOH A 882 1555 1555 2.53 LINK CA CA A 2 O HOH A 959 1555 1555 2.48 LINK CA CA A 5 O LEU A 200 1555 1555 2.37 LINK CA CA A 5 OE1 GLN A 211 1555 1555 2.28 LINK CA CA A 5 O HOH A 824 1555 1555 2.36 LINK CA CA A 5 O HOH A 868 1555 1555 2.27 LINK CA CA A 5 O HOH A 869 1555 1555 2.33 LINK CA CA A 5 O HOH A1136 1555 1555 2.48 LINK CA CA A 5 O HOH A1286 1555 1555 2.35 LINK CA CA A 6 OG SER A 102 1555 1555 2.45 LINK CA CA A 6 O HOH A 559 1555 1555 2.37 LINK CA CA A 6 O HOH A 630 1555 1555 2.33 LINK CA CA A 6 O HOH A 712 1555 1555 2.51 LINK CA CA A 6 O HOH A 735 1555 1555 2.41 LINK CA CA A 6 O HOH A1126 1555 1555 2.53 LINK CA CA A 6 O HOH A1131 1555 1555 2.33 LINK CA CA A 6 O HOH A1295 1555 1555 2.31 LINK CA CA A 7 OD1 ASP A 257 1555 1555 2.32 LINK CA CA A 7 OE1 GLU A 260 1555 1555 2.51 LINK CA CA A 7 OE2 GLU A 260 1555 1555 2.45 LINK CA CA A 7 O PHE A 384 1555 1555 2.27 LINK CA CA A 7 O HOH A 553 1555 1555 2.56 LINK CA CA A 7 O HOH A 562 1555 1555 2.36 LINK CA CA A 7 O HOH B 558 1555 1555 2.46 LINK O HOH A 515 CA CA B 1 1555 1555 2.48 LINK CA CA B 1 OD1 ASP B 257 1555 1555 2.23 LINK CA CA B 1 OE1 GLU B 260 1555 1555 2.52 LINK CA CA B 1 OE2 GLU B 260 1555 1555 2.43 LINK CA CA B 1 O PHE B 384 1555 1555 2.31 LINK CA CA B 1 O HOH B 514 1555 1555 2.36 LINK CA CA B 1 O HOH B 585 1555 1555 2.50 LINK CA CA B 3 O1 EDO B 26 1555 1555 2.46 LINK CA CA B 3 O2 EDO B 26 1555 1555 2.44 LINK CA CA B 3 OE1 GLU B 466 1555 1555 2.47 LINK CA CA B 3 O HOH B 828 1555 1555 2.62 LINK CA CA B 3 O HOH B 869 1555 1555 2.39 LINK CA CA B 3 O HOH B 881 1555 1555 2.45 LINK CA CA B 4 O LEU B 200 1555 1555 2.40 LINK CA CA B 4 OE1 GLN B 211 1555 1555 2.34 LINK CA CA B 4 O HOH B 590 1555 1555 2.34 LINK CA CA B 4 O HOH B 694 1555 1555 2.43 LINK CA CA B 4 O HOH B 958 1555 1555 2.30 LINK CA CA B 4 O HOH B 983 1555 1555 2.48 LINK CA CA B 4 O HOH B1236 1555 1555 2.36 LINK CA CA B 8 OG ASER B 102 1555 1555 2.65 LINK CA CA B 8 O HOH B 653 1555 1555 2.54 LINK CA CA B 8 O HOH B 718 1555 1555 2.60 LINK CA CA B 8 O HOH B 777 1555 1555 2.39 LINK CA CA B 8 O HOH B 803 1555 1555 2.46 LINK CA CA B 8 O HOH B 940 1555 1555 2.35 LINK CA CA B 8 O HOH B1133 1555 1555 2.43 LINK CA CA B 8 O HOH B1140 1555 1555 2.10 LINK CA CA B 9 O HOH B 550 1555 1555 2.43 LINK CA CA B 9 O HOH B 804 1555 1555 2.30 LINK CA CA B 9 O HOH B 824 1555 1555 2.26 LINK CA CA B 9 O HOH B 849 1555 1555 2.45 LINK CA CA B 9 O HOH B 926 1555 1555 2.47 LINK CA CA B 9 O HOH B1045 1555 1555 2.35 LINK CA CA B 9 O HOH B1071 1555 1555 2.31 LINK CA CA B 10 O GLY B 327 1555 1555 2.29 LINK CA CA B 10 O HOH B1108 1555 1555 2.45 LINK CA CA B 10 O HOH B1164 1555 1555 2.60 LINK CA CA B 10 O HOH B1377 1555 1555 2.21 LINK CA CA B 11 O THR B 471 1555 1555 2.63 LINK CA CA B 11 O HOH B 769 1555 1555 2.40 LINK CA CA B 11 O HOH B1279 1555 1555 2.36 LINK CA CA B 11 O HOH B1306 1555 1555 2.34 LINK CA CA B 11 O HOH B1471 1555 1555 2.66 CISPEP 1 ASN A 241 PRO A 242 0 9.97 CISPEP 2 ALA A 379 PRO A 380 0 1.45 CISPEP 3 ASN B 241 PRO B 242 0 6.67 CISPEP 4 ALA B 379 PRO B 380 0 -2.41 SITE 1 AC1 7 THR A 471 HOH A 520 HOH A 563 HOH A 701 SITE 2 AC1 7 HOH A 703 HOH A 882 HOH A 959 SITE 1 AC2 7 LEU A 200 GLN A 211 HOH A 824 HOH A 868 SITE 2 AC2 7 HOH A 869 HOH A1136 HOH A1286 SITE 1 AC3 8 SER A 102 HOH A 559 HOH A 630 HOH A 712 SITE 2 AC3 8 HOH A 735 HOH A1126 HOH A1131 HOH A1295 SITE 1 AC4 6 ASP A 257 GLU A 260 PHE A 384 HOH A 553 SITE 2 AC4 6 HOH A 562 HOH B 558 SITE 1 AC5 6 THR A 91 ASN A 97 SER A 98 ASN A 101 SITE 2 AC5 6 HOH A 825 HOH A 879 SITE 1 AC6 4 CL A 20 ASN A 261 ILE B 206 HOH B1017 SITE 1 AC7 3 GLY A 463 LEU A 465 GLU A 466 SITE 1 AC8 4 GLN A 229 LYS A 406 HOH B 840 HOH B1033 SITE 1 AC9 4 CL A 14 ILE A 206 HOH A 673 ASN B 261 SITE 1 BC1 2 ARG A 94 ASN A 479 SITE 1 BC2 4 THR A 362 TYR A 363 HOH A 880 HOH A1179 SITE 1 BC3 5 TYR A 112 ARG A 165 GLU A 500 HOH A 676 SITE 2 BC3 5 HOH A1234 SITE 1 BC4 3 GLU A 249 TYR A 331 HOH A1350 SITE 1 BC5 6 HOH A 515 ASP B 257 GLU B 260 PHE B 384 SITE 2 BC5 6 HOH B 514 HOH B 585 SITE 1 BC6 7 EDO B 26 GLU B 466 HOH B 767 HOH B 828 SITE 2 BC6 7 HOH B 841 HOH B 869 HOH B 881 SITE 1 BC7 7 LEU B 200 GLN B 211 HOH B 590 HOH B 694 SITE 2 BC7 7 HOH B 958 HOH B 983 HOH B1236 SITE 1 BC8 8 SER B 102 HOH B 653 HOH B 718 HOH B 777 SITE 2 BC8 8 HOH B 803 HOH B 940 HOH B1133 HOH B1140 SITE 1 BC9 7 HOH B 550 HOH B 804 HOH B 824 HOH B 849 SITE 2 BC9 7 HOH B 926 HOH B1045 HOH B1071 SITE 1 CC1 6 GLY B 327 ASP B 486 HOH B 928 HOH B1108 SITE 2 CC1 6 HOH B1164 HOH B1377 SITE 1 CC2 5 THR B 471 HOH B 769 HOH B1279 HOH B1306 SITE 2 CC2 5 HOH B1471 SITE 1 CC3 3 GLY B 463 LEU B 465 GLU B 466 SITE 1 CC4 7 THR B 91 ASN B 97 SER B 98 ASN B 101 SITE 2 CC4 7 HOH B 705 HOH B 761 HOH B 951 SITE 1 CC5 4 THR B 362 TYR B 363 HOH B 692 HOH B1190 SITE 1 CC6 3 ARG B 94 ASN B 479 HOH B1269 SITE 1 CC7 2 GLU B 249 HOH B1396 SITE 1 CC8 9 CA B 3 GLU B 466 ASP B 486 ASN B 487 SITE 2 CC8 9 HOH B 696 HOH B 767 HOH B 869 HOH B 881 SITE 3 CC8 9 HOH B 955 CRYST1 65.650 94.690 165.042 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015232 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010561 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006059 0.00000