data_3JQL # _entry.id 3JQL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3JQL pdb_00003jql 10.2210/pdb3jql/pdb RCSB RCSB055034 ? ? WWPDB D_1000055034 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1MF4 . unspecified PDB 3JQ5 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3JQL _pdbx_database_status.recvd_initial_deposition_date 2009-09-07 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Mirza, Z.' 1 'Vikram, G.' 2 'Singh, N.' 3 'Sinha, M.' 4 'Sharma, S.' 5 'Srinivasan, A.' 6 'Kaur, P.' 7 'Singh, T.P.' 8 # _citation.id primary _citation.title ;Crystal Structure of the Complex Formed Between Phospholipase A2 and a Hexapeptide Fragment of Amyloid Beta Peptide, Lys-Leu-Val-Phe-Phe-Ala at 1.2 A Resolution ; _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mirza, Z.' 1 ? primary 'Vikram, G.' 2 ? primary 'Singh, N.' 3 ? primary 'Sinha, M.' 4 ? primary 'Sharma, S.' 5 ? primary 'Srinivasan, A.' 6 ? primary 'Kaur, P.' 7 ? primary 'Singh, T.P.' 8 ? # _cell.entry_id 3JQL _cell.length_a 42.023 _cell.length_b 42.023 _cell.length_c 64.146 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3JQL _symmetry.space_group_name_H-M 'P 41' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Acidic phospholipase A2 3 (Fragment)' 13128.515 1 ? ? ? ? 2 polymer syn 'Amyloid Beta Peptide' 724.909 1 ? ? ? ? 3 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 4 water nat water 18.015 149 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;NLYQFKNMIQCTVPSRSWADFADYGCYCGKGGSGTPVDDLDRCCQTHDNCYNEAENISGCRPYFKTYSYECTQGTLTCKG DNNACAASVCDCDRLAAICFAGAPYNDANYNIDLKARCN ; ;NLYQFKNMIQCTVPSRSWADFADYGCYCGKGGSGTPVDDLDRCCQTHDNCYNEAENISGCRPYFKTYSYECTQGTLTCKG DNNACAASVCDCDRLAAICFAGAPYNDANYNIDLKARCN ; A ? 2 'polypeptide(L)' no no KLVFFA KLVFFA B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASN n 1 2 LEU n 1 3 TYR n 1 4 GLN n 1 5 PHE n 1 6 LYS n 1 7 ASN n 1 8 MET n 1 9 ILE n 1 10 GLN n 1 11 CYS n 1 12 THR n 1 13 VAL n 1 14 PRO n 1 15 SER n 1 16 ARG n 1 17 SER n 1 18 TRP n 1 19 ALA n 1 20 ASP n 1 21 PHE n 1 22 ALA n 1 23 ASP n 1 24 TYR n 1 25 GLY n 1 26 CYS n 1 27 TYR n 1 28 CYS n 1 29 GLY n 1 30 LYS n 1 31 GLY n 1 32 GLY n 1 33 SER n 1 34 GLY n 1 35 THR n 1 36 PRO n 1 37 VAL n 1 38 ASP n 1 39 ASP n 1 40 LEU n 1 41 ASP n 1 42 ARG n 1 43 CYS n 1 44 CYS n 1 45 GLN n 1 46 THR n 1 47 HIS n 1 48 ASP n 1 49 ASN n 1 50 CYS n 1 51 TYR n 1 52 ASN n 1 53 GLU n 1 54 ALA n 1 55 GLU n 1 56 ASN n 1 57 ILE n 1 58 SER n 1 59 GLY n 1 60 CYS n 1 61 ARG n 1 62 PRO n 1 63 TYR n 1 64 PHE n 1 65 LYS n 1 66 THR n 1 67 TYR n 1 68 SER n 1 69 TYR n 1 70 GLU n 1 71 CYS n 1 72 THR n 1 73 GLN n 1 74 GLY n 1 75 THR n 1 76 LEU n 1 77 THR n 1 78 CYS n 1 79 LYS n 1 80 GLY n 1 81 ASP n 1 82 ASN n 1 83 ASN n 1 84 ALA n 1 85 CYS n 1 86 ALA n 1 87 ALA n 1 88 SER n 1 89 VAL n 1 90 CYS n 1 91 ASP n 1 92 CYS n 1 93 ASP n 1 94 ARG n 1 95 LEU n 1 96 ALA n 1 97 ALA n 1 98 ILE n 1 99 CYS n 1 100 PHE n 1 101 ALA n 1 102 GLY n 1 103 ALA n 1 104 PRO n 1 105 TYR n 1 106 ASN n 1 107 ASP n 1 108 ALA n 1 109 ASN n 1 110 TYR n 1 111 ASN n 1 112 ILE n 1 113 ASP n 1 114 LEU n 1 115 LYS n 1 116 ALA n 1 117 ARG n 1 118 CYS n 1 119 ASN n 2 1 LYS n 2 2 LEU n 2 3 VAL n 2 4 PHE n 2 5 PHE n 2 6 ALA n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 119 _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Naja sagittifera' _entity_src_nat.pdbx_ncbi_taxonomy_id 195058 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 6 _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'Peptide synthesis' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP PA2A3_NAJSG P60045 ? 1 ;NLYQFKNMIQCTVPSRSWQDFADYGCYCGKGGSGTPVDDLDRCCQVHDNCYNEAENISGCRPYFKTYSYECTQGTLTCKG DNNACAASVCDCDRLAAICFAGAPYNDANYNIDLKARCN ; 8 2 PDB 3JQL 3JQL ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3JQL A 1 ? 119 ? P60045 8 ? 126 ? 1 120 2 2 3JQL B 1 ? 6 ? 3JQL 1 ? 6 ? 1 6 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3JQL ALA A 19 ? UNP P60045 GLN 26 conflict 20 1 1 3JQL THR A 46 ? UNP P60045 VAL 53 conflict 47 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3JQL _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.04 _exptl_crystal.density_percent_sol 39.83 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 290 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details 'calcium chloride, sodium phosphate, PH6.0, VAPOR DIFFUSION, HANGING DROP, temperature 290K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 300 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2009-03-30 _diffrn_detector.details MIRROR # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU300' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 3JQL _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 42.0 _reflns.d_resolution_high 1.2 _reflns.number_obs 34924 _reflns.number_all 34924 _reflns.percent_possible_obs 95.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.036 _reflns.pdbx_netI_over_sigmaI 7.9 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.20 _reflns_shell.d_res_low 1.22 _reflns_shell.percent_possible_all 94.6 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.122 _reflns_shell.meanI_over_sigI_obs 2.5 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3JQL _refine.ls_number_reflns_obs 31789 _refine.ls_number_reflns_all 34924 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 42.0 _refine.ls_d_res_high 1.20 _refine.ls_percent_reflns_obs 96.00 _refine.ls_R_factor_obs 0.18662 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18076 _refine.ls_R_factor_R_free 0.19284 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1695 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.962 _refine.correlation_coeff_Fo_to_Fc_free 0.961 _refine.B_iso_mean 23.326 _refine.aniso_B[1][1] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] -0.01 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 1MF4' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.052 _refine.pdbx_overall_ESU_R_Free 0.047 _refine.overall_SU_ML 0.027 _refine.overall_SU_B 1.294 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 960 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 149 _refine_hist.number_atoms_total 1110 _refine_hist.d_res_high 1.20 _refine_hist.d_res_low 42.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.007 0.022 ? 986 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.164 1.929 ? 1337 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.236 5.000 ? 122 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 33.328 24.706 ? 51 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.809 15.000 ? 146 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 3.568 15.000 ? 5 'X-RAY DIFFRACTION' ? r_chiral_restr 0.081 0.200 ? 137 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 775 'X-RAY DIFFRACTION' ? r_nbd_refined 0.214 0.200 ? 473 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.306 0.200 ? 664 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.081 0.200 ? 113 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.034 0.200 ? 3 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.269 0.200 ? 68 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.077 0.200 ? 24 'X-RAY DIFFRACTION' ? r_mcbond_it 0.833 1.500 ? 635 'X-RAY DIFFRACTION' ? r_mcangle_it 1.302 2.000 ? 978 'X-RAY DIFFRACTION' ? r_scbond_it 1.907 3.000 ? 410 'X-RAY DIFFRACTION' ? r_scangle_it 2.501 4.500 ? 359 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 1.337 3.000 ? 1045 'X-RAY DIFFRACTION' ? r_sphericity_free 2.175 3.000 ? 154 'X-RAY DIFFRACTION' ? r_sphericity_bonded 2.360 3.000 ? 960 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.199 _refine_ls_shell.d_res_low 1.230 _refine_ls_shell.number_reflns_R_work 2300 _refine_ls_shell.R_factor_R_work 0.229 _refine_ls_shell.percent_reflns_obs 94.57 _refine_ls_shell.R_factor_R_free 0.256 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 104 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3JQL _struct.title ;Crystal Structure of the Complex Formed Between Phospholipase A2 and a Hexapeptide Fragment of Amyloid Beta Peptide, Lys-Leu-Val-Phe-Phe-Ala at 1.2 A Resolution ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3JQL _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'PHOSPHOLIPASE A2, HEXAPEPTIDE, AMYLOID BETA, HYDROLASE, Disulfide bond, Lipid degradation, Metal-binding, Secreted' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 1 ? VAL A 13 ? ASN A 1 VAL A 13 1 ? 13 HELX_P HELX_P2 2 SER A 17 ? ALA A 22 ? SER A 18 ALA A 23 5 ? 6 HELX_P HELX_P3 3 ASP A 38 ? GLU A 55 ? ASP A 39 GLU A 56 1 ? 18 HELX_P HELX_P4 4 ASN A 83 ? ALA A 103 ? ASN A 84 ALA A 104 1 ? 21 HELX_P HELX_P5 5 ASN A 106 ? TYR A 110 ? ASN A 107 TYR A 111 5 ? 5 HELX_P HELX_P6 6 ASP A 113 ? CYS A 118 ? ASP A 114 CYS A 119 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 11 SG ? ? ? 1_555 A CYS 71 SG ? ? A CYS 11 A CYS 72 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf2 disulf ? ? A CYS 26 SG ? ? ? 1_555 A CYS 118 SG ? ? A CYS 27 A CYS 119 1_555 ? ? ? ? ? ? ? 2.037 ? ? disulf3 disulf ? ? A CYS 28 SG ? ? ? 1_555 A CYS 44 SG ? ? A CYS 29 A CYS 45 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf4 disulf ? ? A CYS 43 SG ? ? ? 1_555 A CYS 99 SG ? ? A CYS 44 A CYS 100 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf5 disulf ? ? A CYS 50 SG ? ? ? 1_555 A CYS 92 SG ? ? A CYS 51 A CYS 93 1_555 ? ? ? ? ? ? ? 2.041 ? ? disulf6 disulf ? ? A CYS 60 SG ? ? ? 1_555 A CYS 85 SG ? ? A CYS 61 A CYS 86 1_555 ? ? ? ? ? ? ? 2.053 ? ? disulf7 disulf ? ? A CYS 78 SG ? ? ? 1_555 A CYS 90 SG ? ? A CYS 79 A CYS 91 1_555 ? ? ? ? ? ? ? 2.047 ? ? metalc1 metalc ? ? A TYR 27 O ? ? ? 1_555 C CA . CA ? ? A TYR 28 A CA 121 1_555 ? ? ? ? ? ? ? 2.607 ? ? metalc2 metalc ? ? A GLY 29 O ? ? ? 1_555 C CA . CA ? ? A GLY 30 A CA 121 1_555 ? ? ? ? ? ? ? 2.670 ? ? metalc3 metalc ? ? A GLY 31 O ? ? ? 1_555 C CA . CA ? ? A GLY 32 A CA 121 1_555 ? ? ? ? ? ? ? 2.426 ? ? metalc4 metalc ? ? A ASP 48 OD1 ? ? ? 1_555 C CA . CA ? ? A ASP 49 A CA 121 1_555 ? ? ? ? ? ? ? 2.400 ? ? metalc5 metalc ? ? A ASP 48 OD2 ? ? ? 1_555 C CA . CA ? ? A ASP 49 A CA 121 1_555 ? ? ? ? ? ? ? 2.219 ? ? metalc6 metalc ? ? C CA . CA ? ? ? 1_555 D HOH . O ? ? A CA 121 A HOH 222 1_555 ? ? ? ? ? ? ? 2.808 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 69 ? THR A 72 ? TYR A 70 THR A 73 A 2 THR A 75 ? CYS A 78 ? THR A 76 CYS A 79 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id GLU _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 70 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id GLU _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 71 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id THR _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 77 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id THR _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 78 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id CA _struct_site.pdbx_auth_seq_id 121 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 6 _struct_site.details 'BINDING SITE FOR RESIDUE CA A 121' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 TYR A 27 ? TYR A 28 . ? 1_555 ? 2 AC1 6 GLY A 29 ? GLY A 30 . ? 1_555 ? 3 AC1 6 GLY A 31 ? GLY A 32 . ? 1_555 ? 4 AC1 6 ASP A 48 ? ASP A 49 . ? 1_555 ? 5 AC1 6 HOH D . ? HOH A 222 . ? 1_555 ? 6 AC1 6 LYS B 1 ? LYS B 1 . ? 1_555 ? # _database_PDB_matrix.entry_id 3JQL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3JQL _atom_sites.fract_transf_matrix[1][1] 0.023796 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023796 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015589 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASN 1 1 1 ASN ASN A . n A 1 2 LEU 2 2 2 LEU LEU A . n A 1 3 TYR 3 3 3 TYR TYR A . n A 1 4 GLN 4 4 4 GLN GLN A . n A 1 5 PHE 5 5 5 PHE PHE A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 ASN 7 7 7 ASN ASN A . n A 1 8 MET 8 8 8 MET MET A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 GLN 10 10 10 GLN GLN A . n A 1 11 CYS 11 11 11 CYS CYS A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 VAL 13 13 13 VAL VAL A . n A 1 14 PRO 14 14 14 PRO PRO A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 ARG 16 17 17 ARG ARG A . n A 1 17 SER 17 18 18 SER SER A . n A 1 18 TRP 18 19 19 TRP TRP A . n A 1 19 ALA 19 20 20 ALA ALA A . n A 1 20 ASP 20 21 21 ASP ASP A . n A 1 21 PHE 21 22 22 PHE PHE A . n A 1 22 ALA 22 23 23 ALA ALA A . n A 1 23 ASP 23 24 24 ASP ASP A . n A 1 24 TYR 24 25 25 TYR TYR A . n A 1 25 GLY 25 26 26 GLY GLY A . n A 1 26 CYS 26 27 27 CYS CYS A . n A 1 27 TYR 27 28 28 TYR TYR A . n A 1 28 CYS 28 29 29 CYS CYS A . n A 1 29 GLY 29 30 30 GLY GLY A . n A 1 30 LYS 30 31 31 LYS LYS A . n A 1 31 GLY 31 32 32 GLY GLY A . n A 1 32 GLY 32 33 33 GLY GLY A . n A 1 33 SER 33 34 34 SER SER A . n A 1 34 GLY 34 35 35 GLY GLY A . n A 1 35 THR 35 36 36 THR THR A . n A 1 36 PRO 36 37 37 PRO PRO A . n A 1 37 VAL 37 38 38 VAL VAL A . n A 1 38 ASP 38 39 39 ASP ASP A . n A 1 39 ASP 39 40 40 ASP ASP A . n A 1 40 LEU 40 41 41 LEU LEU A . n A 1 41 ASP 41 42 42 ASP ASP A . n A 1 42 ARG 42 43 43 ARG ARG A . n A 1 43 CYS 43 44 44 CYS CYS A . n A 1 44 CYS 44 45 45 CYS CYS A . n A 1 45 GLN 45 46 46 GLN GLN A . n A 1 46 THR 46 47 47 THR THR A . n A 1 47 HIS 47 48 48 HIS HIS A . n A 1 48 ASP 48 49 49 ASP ASP A . n A 1 49 ASN 49 50 50 ASN ASN A . n A 1 50 CYS 50 51 51 CYS CYS A . n A 1 51 TYR 51 52 52 TYR TYR A . n A 1 52 ASN 52 53 53 ASN ASN A . n A 1 53 GLU 53 54 54 GLU GLU A . n A 1 54 ALA 54 55 55 ALA ALA A . n A 1 55 GLU 55 56 56 GLU GLU A . n A 1 56 ASN 56 57 57 ASN ASN A . n A 1 57 ILE 57 58 58 ILE ILE A . n A 1 58 SER 58 59 59 SER SER A . n A 1 59 GLY 59 60 60 GLY GLY A . n A 1 60 CYS 60 61 61 CYS CYS A . n A 1 61 ARG 61 62 62 ARG ARG A . n A 1 62 PRO 62 63 63 PRO PRO A . n A 1 63 TYR 63 64 64 TYR TYR A . n A 1 64 PHE 64 65 65 PHE PHE A . n A 1 65 LYS 65 66 66 LYS LYS A . n A 1 66 THR 66 67 67 THR THR A . n A 1 67 TYR 67 68 68 TYR TYR A . n A 1 68 SER 68 69 69 SER SER A . n A 1 69 TYR 69 70 70 TYR TYR A . n A 1 70 GLU 70 71 71 GLU GLU A . n A 1 71 CYS 71 72 72 CYS CYS A . n A 1 72 THR 72 73 73 THR THR A . n A 1 73 GLN 73 74 74 GLN GLN A . n A 1 74 GLY 74 75 75 GLY GLY A . n A 1 75 THR 75 76 76 THR THR A . n A 1 76 LEU 76 77 77 LEU LEU A . n A 1 77 THR 77 78 78 THR THR A . n A 1 78 CYS 78 79 79 CYS CYS A . n A 1 79 LYS 79 80 80 LYS LYS A . n A 1 80 GLY 80 81 81 GLY GLY A . n A 1 81 ASP 81 82 82 ASP ASP A . n A 1 82 ASN 82 83 83 ASN ASN A . n A 1 83 ASN 83 84 84 ASN ASN A . n A 1 84 ALA 84 85 85 ALA ALA A . n A 1 85 CYS 85 86 86 CYS CYS A . n A 1 86 ALA 86 87 87 ALA ALA A . n A 1 87 ALA 87 88 88 ALA ALA A . n A 1 88 SER 88 89 89 SER SER A . n A 1 89 VAL 89 90 90 VAL VAL A . n A 1 90 CYS 90 91 91 CYS CYS A . n A 1 91 ASP 91 92 92 ASP ASP A . n A 1 92 CYS 92 93 93 CYS CYS A . n A 1 93 ASP 93 94 94 ASP ASP A . n A 1 94 ARG 94 95 95 ARG ARG A . n A 1 95 LEU 95 96 96 LEU LEU A . n A 1 96 ALA 96 97 97 ALA ALA A . n A 1 97 ALA 97 98 98 ALA ALA A . n A 1 98 ILE 98 99 99 ILE ILE A . n A 1 99 CYS 99 100 100 CYS CYS A . n A 1 100 PHE 100 101 101 PHE PHE A . n A 1 101 ALA 101 102 102 ALA ALA A . n A 1 102 GLY 102 103 103 GLY GLY A . n A 1 103 ALA 103 104 104 ALA ALA A . n A 1 104 PRO 104 105 105 PRO PRO A . n A 1 105 TYR 105 106 106 TYR TYR A . n A 1 106 ASN 106 107 107 ASN ASN A . n A 1 107 ASP 107 108 108 ASP ASP A . n A 1 108 ALA 108 109 109 ALA ALA A . n A 1 109 ASN 109 110 110 ASN ASN A . n A 1 110 TYR 110 111 111 TYR TYR A . n A 1 111 ASN 111 112 112 ASN ASN A . n A 1 112 ILE 112 113 113 ILE ILE A . n A 1 113 ASP 113 114 114 ASP ASP A . n A 1 114 LEU 114 115 115 LEU LEU A . n A 1 115 LYS 115 116 116 LYS LYS A . n A 1 116 ALA 116 117 117 ALA ALA A . n A 1 117 ARG 117 118 118 ARG ARG A . n A 1 118 CYS 118 119 119 CYS CYS A . n A 1 119 ASN 119 120 120 ASN ASN A . n B 2 1 LYS 1 1 1 LYS LYS B . n B 2 2 LEU 2 2 2 LEU LEU B . n B 2 3 VAL 3 3 3 VAL VAL B . n B 2 4 PHE 4 4 4 PHE PHE B . n B 2 5 PHE 5 5 5 PHE PHE B . n B 2 6 ALA 6 6 6 ALA ALA B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA 1 121 1 CA CA A . D 4 HOH 1 16 16 HOH HOH A . D 4 HOH 2 122 122 HOH HOH A . D 4 HOH 3 123 123 HOH HOH A . D 4 HOH 4 124 1 HOH HOH A . D 4 HOH 5 125 125 HOH HOH A . D 4 HOH 6 126 126 HOH HOH A . D 4 HOH 7 127 127 HOH HOH A . D 4 HOH 8 128 2 HOH HOH A . D 4 HOH 9 129 129 HOH HOH A . D 4 HOH 10 130 130 HOH HOH A . D 4 HOH 11 131 131 HOH HOH A . D 4 HOH 12 132 132 HOH HOH A . D 4 HOH 13 133 133 HOH HOH A . D 4 HOH 14 134 3 HOH HOH A . D 4 HOH 15 135 135 HOH HOH A . D 4 HOH 16 136 136 HOH HOH A . D 4 HOH 17 137 137 HOH HOH A . D 4 HOH 18 138 138 HOH HOH A . D 4 HOH 19 139 139 HOH HOH A . D 4 HOH 20 140 5 HOH HOH A . D 4 HOH 21 141 141 HOH HOH A . D 4 HOH 22 142 6 HOH HOH A . D 4 HOH 23 143 143 HOH HOH A . D 4 HOH 24 144 144 HOH HOH A . D 4 HOH 25 145 145 HOH HOH A . D 4 HOH 26 146 146 HOH HOH A . D 4 HOH 27 147 147 HOH HOH A . D 4 HOH 28 148 7 HOH HOH A . D 4 HOH 29 149 149 HOH HOH A . D 4 HOH 30 150 150 HOH HOH A . D 4 HOH 31 151 151 HOH HOH A . D 4 HOH 32 152 8 HOH HOH A . D 4 HOH 33 153 153 HOH HOH A . D 4 HOH 34 154 9 HOH HOH A . D 4 HOH 35 155 155 HOH HOH A . D 4 HOH 36 156 156 HOH HOH A . D 4 HOH 37 157 157 HOH HOH A . D 4 HOH 38 158 158 HOH HOH A . D 4 HOH 39 159 159 HOH HOH A . D 4 HOH 40 160 160 HOH HOH A . D 4 HOH 41 161 161 HOH HOH A . D 4 HOH 42 162 162 HOH HOH A . D 4 HOH 43 163 163 HOH HOH A . D 4 HOH 44 164 164 HOH HOH A . D 4 HOH 45 165 165 HOH HOH A . D 4 HOH 46 166 10 HOH HOH A . D 4 HOH 47 167 167 HOH HOH A . D 4 HOH 48 168 168 HOH HOH A . D 4 HOH 49 169 11 HOH HOH A . D 4 HOH 50 170 170 HOH HOH A . D 4 HOH 51 171 12 HOH HOH A . D 4 HOH 52 172 172 HOH HOH A . D 4 HOH 53 173 13 HOH HOH A . D 4 HOH 54 174 14 HOH HOH A . D 4 HOH 55 175 15 HOH HOH A . D 4 HOH 56 176 17 HOH HOH A . D 4 HOH 57 177 19 HOH HOH A . D 4 HOH 58 178 20 HOH HOH A . D 4 HOH 59 179 21 HOH HOH A . D 4 HOH 60 180 22 HOH HOH A . D 4 HOH 61 181 23 HOH HOH A . D 4 HOH 62 182 24 HOH HOH A . D 4 HOH 63 183 25 HOH HOH A . D 4 HOH 64 184 26 HOH HOH A . D 4 HOH 65 185 27 HOH HOH A . D 4 HOH 66 186 28 HOH HOH A . D 4 HOH 67 187 29 HOH HOH A . D 4 HOH 68 188 30 HOH HOH A . D 4 HOH 69 189 31 HOH HOH A . D 4 HOH 70 190 32 HOH HOH A . D 4 HOH 71 191 33 HOH HOH A . D 4 HOH 72 192 34 HOH HOH A . D 4 HOH 73 193 35 HOH HOH A . D 4 HOH 74 194 36 HOH HOH A . D 4 HOH 75 195 37 HOH HOH A . D 4 HOH 76 196 38 HOH HOH A . D 4 HOH 77 197 39 HOH HOH A . D 4 HOH 78 198 40 HOH HOH A . D 4 HOH 79 199 41 HOH HOH A . D 4 HOH 80 200 42 HOH HOH A . D 4 HOH 81 201 43 HOH HOH A . D 4 HOH 82 202 44 HOH HOH A . D 4 HOH 83 203 45 HOH HOH A . D 4 HOH 84 204 46 HOH HOH A . D 4 HOH 85 205 47 HOH HOH A . D 4 HOH 86 206 48 HOH HOH A . D 4 HOH 87 207 49 HOH HOH A . D 4 HOH 88 208 50 HOH HOH A . D 4 HOH 89 209 51 HOH HOH A . D 4 HOH 90 210 52 HOH HOH A . D 4 HOH 91 211 53 HOH HOH A . D 4 HOH 92 212 54 HOH HOH A . D 4 HOH 93 213 55 HOH HOH A . D 4 HOH 94 214 56 HOH HOH A . D 4 HOH 95 215 57 HOH HOH A . D 4 HOH 96 216 58 HOH HOH A . D 4 HOH 97 217 59 HOH HOH A . D 4 HOH 98 218 60 HOH HOH A . D 4 HOH 99 219 61 HOH HOH A . D 4 HOH 100 220 62 HOH HOH A . D 4 HOH 101 221 63 HOH HOH A . D 4 HOH 102 222 64 HOH HOH A . D 4 HOH 103 223 66 HOH HOH A . D 4 HOH 104 224 67 HOH HOH A . D 4 HOH 105 225 68 HOH HOH A . D 4 HOH 106 226 69 HOH HOH A . D 4 HOH 107 227 70 HOH HOH A . D 4 HOH 108 228 71 HOH HOH A . D 4 HOH 109 229 72 HOH HOH A . D 4 HOH 110 230 73 HOH HOH A . D 4 HOH 111 231 74 HOH HOH A . D 4 HOH 112 232 75 HOH HOH A . D 4 HOH 113 233 76 HOH HOH A . D 4 HOH 114 234 77 HOH HOH A . D 4 HOH 115 235 78 HOH HOH A . D 4 HOH 116 236 79 HOH HOH A . D 4 HOH 117 237 80 HOH HOH A . D 4 HOH 118 238 82 HOH HOH A . D 4 HOH 119 239 84 HOH HOH A . D 4 HOH 120 240 85 HOH HOH A . D 4 HOH 121 241 86 HOH HOH A . D 4 HOH 122 242 87 HOH HOH A . D 4 HOH 123 243 89 HOH HOH A . D 4 HOH 124 244 90 HOH HOH A . D 4 HOH 125 245 91 HOH HOH A . D 4 HOH 126 246 92 HOH HOH A . D 4 HOH 127 247 93 HOH HOH A . D 4 HOH 128 248 94 HOH HOH A . D 4 HOH 129 249 96 HOH HOH A . D 4 HOH 130 250 97 HOH HOH A . D 4 HOH 131 251 99 HOH HOH A . D 4 HOH 132 252 100 HOH HOH A . D 4 HOH 133 253 102 HOH HOH A . D 4 HOH 134 254 103 HOH HOH A . D 4 HOH 135 255 106 HOH HOH A . D 4 HOH 136 256 107 HOH HOH A . D 4 HOH 137 257 108 HOH HOH A . D 4 HOH 138 258 109 HOH HOH A . D 4 HOH 139 259 110 HOH HOH A . D 4 HOH 140 260 111 HOH HOH A . D 4 HOH 141 261 112 HOH HOH A . D 4 HOH 142 262 113 HOH HOH A . D 4 HOH 143 263 114 HOH HOH A . D 4 HOH 144 264 115 HOH HOH A . D 4 HOH 145 265 116 HOH HOH A . D 4 HOH 146 266 117 HOH HOH A . D 4 HOH 147 267 118 HOH HOH A . D 4 HOH 148 268 119 HOH HOH A . D 4 HOH 149 269 120 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1000 ? 1 MORE -19 ? 1 'SSA (A^2)' 6820 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A TYR 27 ? A TYR 28 ? 1_555 CA ? C CA . ? A CA 121 ? 1_555 O ? A GLY 29 ? A GLY 30 ? 1_555 86.9 ? 2 O ? A TYR 27 ? A TYR 28 ? 1_555 CA ? C CA . ? A CA 121 ? 1_555 O ? A GLY 31 ? A GLY 32 ? 1_555 83.7 ? 3 O ? A GLY 29 ? A GLY 30 ? 1_555 CA ? C CA . ? A CA 121 ? 1_555 O ? A GLY 31 ? A GLY 32 ? 1_555 78.4 ? 4 O ? A TYR 27 ? A TYR 28 ? 1_555 CA ? C CA . ? A CA 121 ? 1_555 OD1 ? A ASP 48 ? A ASP 49 ? 1_555 91.7 ? 5 O ? A GLY 29 ? A GLY 30 ? 1_555 CA ? C CA . ? A CA 121 ? 1_555 OD1 ? A ASP 48 ? A ASP 49 ? 1_555 142.2 ? 6 O ? A GLY 31 ? A GLY 32 ? 1_555 CA ? C CA . ? A CA 121 ? 1_555 OD1 ? A ASP 48 ? A ASP 49 ? 1_555 139.0 ? 7 O ? A TYR 27 ? A TYR 28 ? 1_555 CA ? C CA . ? A CA 121 ? 1_555 OD2 ? A ASP 48 ? A ASP 49 ? 1_555 99.6 ? 8 O ? A GLY 29 ? A GLY 30 ? 1_555 CA ? C CA . ? A CA 121 ? 1_555 OD2 ? A ASP 48 ? A ASP 49 ? 1_555 160.6 ? 9 O ? A GLY 31 ? A GLY 32 ? 1_555 CA ? C CA . ? A CA 121 ? 1_555 OD2 ? A ASP 48 ? A ASP 49 ? 1_555 84.1 ? 10 OD1 ? A ASP 48 ? A ASP 49 ? 1_555 CA ? C CA . ? A CA 121 ? 1_555 OD2 ? A ASP 48 ? A ASP 49 ? 1_555 56.4 ? 11 O ? A TYR 27 ? A TYR 28 ? 1_555 CA ? C CA . ? A CA 121 ? 1_555 O ? D HOH . ? A HOH 222 ? 1_555 156.8 ? 12 O ? A GLY 29 ? A GLY 30 ? 1_555 CA ? C CA . ? A CA 121 ? 1_555 O ? D HOH . ? A HOH 222 ? 1_555 77.3 ? 13 O ? A GLY 31 ? A GLY 32 ? 1_555 CA ? C CA . ? A CA 121 ? 1_555 O ? D HOH . ? A HOH 222 ? 1_555 76.5 ? 14 OD1 ? A ASP 48 ? A ASP 49 ? 1_555 CA ? C CA . ? A CA 121 ? 1_555 O ? D HOH . ? A HOH 222 ? 1_555 111.2 ? 15 OD2 ? A ASP 48 ? A ASP 49 ? 1_555 CA ? C CA . ? A CA 121 ? 1_555 O ? D HOH . ? A HOH 222 ? 1_555 90.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-09-29 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' 6 3 'Structure model' 'Source and taxonomy' 7 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' entity 5 3 'Structure model' entity_name_com 6 3 'Structure model' entity_src_nat 7 3 'Structure model' pdbx_entity_src_syn 8 3 'Structure model' pdbx_initial_refinement_model 9 3 'Structure model' struct_ref 10 3 'Structure model' struct_ref_seq 11 3 'Structure model' struct_ref_seq_dif 12 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_entity.pdbx_description' 4 3 'Structure model' '_entity.pdbx_ec' 5 3 'Structure model' '_entity_src_nat.common_name' 6 3 'Structure model' '_entity_src_nat.pdbx_beg_seq_num' 7 3 'Structure model' '_entity_src_nat.pdbx_end_seq_num' 8 3 'Structure model' '_pdbx_entity_src_syn.pdbx_beg_seq_num' 9 3 'Structure model' '_pdbx_entity_src_syn.pdbx_end_seq_num' 10 3 'Structure model' '_struct_ref_seq_dif.details' 11 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 12 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 13 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 MOLREP phasing . ? 2 REFMAC refinement 5.2.0019 ? 3 AUTOMAR 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 # _pdbx_entry_details.entry_id 3JQL _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;IN CHAIN A, RESIDUE NUMBER 16 IS SIMPLY SKIPPED. THE AUTHORS BELIEVE THAT THE SEQRES IS CORRECT AND THESE MUTATIONS ARE PRESENT IN THE DEPOSITED SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A LEU 2 ? ? CB A LEU 2 ? ? CG A LEU 2 ? ? 135.90 115.30 20.60 2.30 N 2 1 CD B LYS 1 ? ? CE B LYS 1 ? ? NZ B LYS 1 ? ? 161.63 111.70 49.93 2.30 N 3 1 C B LYS 1 ? ? N B LEU 2 ? ? CA B LEU 2 ? ? 136.97 121.70 15.27 2.50 Y 4 1 CA B LEU 2 ? ? CB B LEU 2 ? ? CG B LEU 2 ? ? 129.70 115.30 14.40 2.30 N 5 1 CA B VAL 3 ? ? CB B VAL 3 ? ? CG1 B VAL 3 ? ? 122.08 110.90 11.18 1.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 24 ? ? -157.46 81.55 2 1 LEU B 2 ? ? 59.42 -28.84 3 1 VAL B 3 ? ? 36.25 29.87 4 1 PHE B 4 ? ? -101.73 57.95 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 GLN N N N N 89 GLN CA C N S 90 GLN C C N N 91 GLN O O N N 92 GLN CB C N N 93 GLN CG C N N 94 GLN CD C N N 95 GLN OE1 O N N 96 GLN NE2 N N N 97 GLN OXT O N N 98 GLN H H N N 99 GLN H2 H N N 100 GLN HA H N N 101 GLN HB2 H N N 102 GLN HB3 H N N 103 GLN HG2 H N N 104 GLN HG3 H N N 105 GLN HE21 H N N 106 GLN HE22 H N N 107 GLN HXT H N N 108 GLU N N N N 109 GLU CA C N S 110 GLU C C N N 111 GLU O O N N 112 GLU CB C N N 113 GLU CG C N N 114 GLU CD C N N 115 GLU OE1 O N N 116 GLU OE2 O N N 117 GLU OXT O N N 118 GLU H H N N 119 GLU H2 H N N 120 GLU HA H N N 121 GLU HB2 H N N 122 GLU HB3 H N N 123 GLU HG2 H N N 124 GLU HG3 H N N 125 GLU HE2 H N N 126 GLU HXT H N N 127 GLY N N N N 128 GLY CA C N N 129 GLY C C N N 130 GLY O O N N 131 GLY OXT O N N 132 GLY H H N N 133 GLY H2 H N N 134 GLY HA2 H N N 135 GLY HA3 H N N 136 GLY HXT H N N 137 HIS N N N N 138 HIS CA C N S 139 HIS C C N N 140 HIS O O N N 141 HIS CB C N N 142 HIS CG C Y N 143 HIS ND1 N Y N 144 HIS CD2 C Y N 145 HIS CE1 C Y N 146 HIS NE2 N Y N 147 HIS OXT O N N 148 HIS H H N N 149 HIS H2 H N N 150 HIS HA H N N 151 HIS HB2 H N N 152 HIS HB3 H N N 153 HIS HD1 H N N 154 HIS HD2 H N N 155 HIS HE1 H N N 156 HIS HE2 H N N 157 HIS HXT H N N 158 HOH O O N N 159 HOH H1 H N N 160 HOH H2 H N N 161 ILE N N N N 162 ILE CA C N S 163 ILE C C N N 164 ILE O O N N 165 ILE CB C N S 166 ILE CG1 C N N 167 ILE CG2 C N N 168 ILE CD1 C N N 169 ILE OXT O N N 170 ILE H H N N 171 ILE H2 H N N 172 ILE HA H N N 173 ILE HB H N N 174 ILE HG12 H N N 175 ILE HG13 H N N 176 ILE HG21 H N N 177 ILE HG22 H N N 178 ILE HG23 H N N 179 ILE HD11 H N N 180 ILE HD12 H N N 181 ILE HD13 H N N 182 ILE HXT H N N 183 LEU N N N N 184 LEU CA C N S 185 LEU C C N N 186 LEU O O N N 187 LEU CB C N N 188 LEU CG C N N 189 LEU CD1 C N N 190 LEU CD2 C N N 191 LEU OXT O N N 192 LEU H H N N 193 LEU H2 H N N 194 LEU HA H N N 195 LEU HB2 H N N 196 LEU HB3 H N N 197 LEU HG H N N 198 LEU HD11 H N N 199 LEU HD12 H N N 200 LEU HD13 H N N 201 LEU HD21 H N N 202 LEU HD22 H N N 203 LEU HD23 H N N 204 LEU HXT H N N 205 LYS N N N N 206 LYS CA C N S 207 LYS C C N N 208 LYS O O N N 209 LYS CB C N N 210 LYS CG C N N 211 LYS CD C N N 212 LYS CE C N N 213 LYS NZ N N N 214 LYS OXT O N N 215 LYS H H N N 216 LYS H2 H N N 217 LYS HA H N N 218 LYS HB2 H N N 219 LYS HB3 H N N 220 LYS HG2 H N N 221 LYS HG3 H N N 222 LYS HD2 H N N 223 LYS HD3 H N N 224 LYS HE2 H N N 225 LYS HE3 H N N 226 LYS HZ1 H N N 227 LYS HZ2 H N N 228 LYS HZ3 H N N 229 LYS HXT H N N 230 MET N N N N 231 MET CA C N S 232 MET C C N N 233 MET O O N N 234 MET CB C N N 235 MET CG C N N 236 MET SD S N N 237 MET CE C N N 238 MET OXT O N N 239 MET H H N N 240 MET H2 H N N 241 MET HA H N N 242 MET HB2 H N N 243 MET HB3 H N N 244 MET HG2 H N N 245 MET HG3 H N N 246 MET HE1 H N N 247 MET HE2 H N N 248 MET HE3 H N N 249 MET HXT H N N 250 PHE N N N N 251 PHE CA C N S 252 PHE C C N N 253 PHE O O N N 254 PHE CB C N N 255 PHE CG C Y N 256 PHE CD1 C Y N 257 PHE CD2 C Y N 258 PHE CE1 C Y N 259 PHE CE2 C Y N 260 PHE CZ C Y N 261 PHE OXT O N N 262 PHE H H N N 263 PHE H2 H N N 264 PHE HA H N N 265 PHE HB2 H N N 266 PHE HB3 H N N 267 PHE HD1 H N N 268 PHE HD2 H N N 269 PHE HE1 H N N 270 PHE HE2 H N N 271 PHE HZ H N N 272 PHE HXT H N N 273 PRO N N N N 274 PRO CA C N S 275 PRO C C N N 276 PRO O O N N 277 PRO CB C N N 278 PRO CG C N N 279 PRO CD C N N 280 PRO OXT O N N 281 PRO H H N N 282 PRO HA H N N 283 PRO HB2 H N N 284 PRO HB3 H N N 285 PRO HG2 H N N 286 PRO HG3 H N N 287 PRO HD2 H N N 288 PRO HD3 H N N 289 PRO HXT H N N 290 SER N N N N 291 SER CA C N S 292 SER C C N N 293 SER O O N N 294 SER CB C N N 295 SER OG O N N 296 SER OXT O N N 297 SER H H N N 298 SER H2 H N N 299 SER HA H N N 300 SER HB2 H N N 301 SER HB3 H N N 302 SER HG H N N 303 SER HXT H N N 304 THR N N N N 305 THR CA C N S 306 THR C C N N 307 THR O O N N 308 THR CB C N R 309 THR OG1 O N N 310 THR CG2 C N N 311 THR OXT O N N 312 THR H H N N 313 THR H2 H N N 314 THR HA H N N 315 THR HB H N N 316 THR HG1 H N N 317 THR HG21 H N N 318 THR HG22 H N N 319 THR HG23 H N N 320 THR HXT H N N 321 TRP N N N N 322 TRP CA C N S 323 TRP C C N N 324 TRP O O N N 325 TRP CB C N N 326 TRP CG C Y N 327 TRP CD1 C Y N 328 TRP CD2 C Y N 329 TRP NE1 N Y N 330 TRP CE2 C Y N 331 TRP CE3 C Y N 332 TRP CZ2 C Y N 333 TRP CZ3 C Y N 334 TRP CH2 C Y N 335 TRP OXT O N N 336 TRP H H N N 337 TRP H2 H N N 338 TRP HA H N N 339 TRP HB2 H N N 340 TRP HB3 H N N 341 TRP HD1 H N N 342 TRP HE1 H N N 343 TRP HE3 H N N 344 TRP HZ2 H N N 345 TRP HZ3 H N N 346 TRP HH2 H N N 347 TRP HXT H N N 348 TYR N N N N 349 TYR CA C N S 350 TYR C C N N 351 TYR O O N N 352 TYR CB C N N 353 TYR CG C Y N 354 TYR CD1 C Y N 355 TYR CD2 C Y N 356 TYR CE1 C Y N 357 TYR CE2 C Y N 358 TYR CZ C Y N 359 TYR OH O N N 360 TYR OXT O N N 361 TYR H H N N 362 TYR H2 H N N 363 TYR HA H N N 364 TYR HB2 H N N 365 TYR HB3 H N N 366 TYR HD1 H N N 367 TYR HD2 H N N 368 TYR HE1 H N N 369 TYR HE2 H N N 370 TYR HH H N N 371 TYR HXT H N N 372 VAL N N N N 373 VAL CA C N S 374 VAL C C N N 375 VAL O O N N 376 VAL CB C N N 377 VAL CG1 C N N 378 VAL CG2 C N N 379 VAL OXT O N N 380 VAL H H N N 381 VAL H2 H N N 382 VAL HA H N N 383 VAL HB H N N 384 VAL HG11 H N N 385 VAL HG12 H N N 386 VAL HG13 H N N 387 VAL HG21 H N N 388 VAL HG22 H N N 389 VAL HG23 H N N 390 VAL HXT H N N 391 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'CALCIUM ION' CA 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1MF4 _pdbx_initial_refinement_model.details 'PDB ENTRY 1MF4' #