data_3JRL # _entry.id 3JRL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3JRL RCSB RCSB055070 WWPDB D_1000055070 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2010-08-11 _pdbx_database_PDB_obs_spr.pdb_id 3O5X _pdbx_database_PDB_obs_spr.replace_pdb_id 3JRL _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.status_code OBS _pdbx_database_status.entry_id 3JRL _pdbx_database_status.recvd_initial_deposition_date 2009-09-08 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf OBS _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zhang, X.' 1 'He, Y.T.' 2 'Liu, S.' 3 'Yu, Z.H.' 4 'Wu, L.' 5 'Zhang, Z.Y.' 6 # _citation.id primary _citation.title ;Salicylic Acid Based Small Molecule Inhibitor for the Oncogenic Src Homology-2 Domain Containing Protein Tyrosine Phosphatase-2 (SHP2). ; _citation.journal_abbrev J.Med.Chem. _citation.journal_volume 53 _citation.page_first 2482 _citation.page_last 2493 _citation.year 2010 _citation.journal_id_ASTM JMCMAR _citation.country US _citation.journal_id_ISSN 0022-2623 _citation.journal_id_CSD 0151 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20170098 _citation.pdbx_database_id_DOI 10.1021/jm901645u # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Zhang, X.' 1 primary 'He, Y.' 2 primary 'Liu, S.' 3 primary 'Yu, Z.' 4 primary 'Jiang, Z.X.' 5 primary 'Yang, Z.' 6 primary 'Dong, Y.' 7 primary 'Nabinger, S.C.' 8 primary 'Wu, L.' 9 primary 'Gunawan, A.M.' 10 primary 'Wang, L.' 11 primary 'Chan, R.J.' 12 primary 'Zhang, Z.Y.' 13 # _cell.entry_id 3JRL _cell.length_a 39.544 _cell.length_b 75.829 _cell.length_c 48.214 _cell.angle_alpha 90.00 _cell.angle_beta 98.53 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3JRL _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Oncogenic tyrosine phosphatase SHP2' 32277.703 1 ? ? 'UNP residues 262-528, catalytic domain' ? 2 non-polymer syn '3-{1-[3-(biphenyl-4-ylamino)-3-oxopropyl]-1H-1,2,3-triazol-4-yl}-6-hydroxy-1-methyl-2-phenyl-1H-indole-5-carboxylic acid' 557.599 1 ? ? ? ? 3 water nat water 18.015 123 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MLYSRKEGQRQENKNKNRYKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFETKCNNSKPKKSYIATQGCLQNTVND FWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHF RTWPDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQ RSGMVQTEAQYRFIYMAVQHYIETLQRRLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MLYSRKEGQRQENKNKNRYKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFETKCNNSKPKKSYIATQGCLQNTVND FWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHF RTWPDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQ RSGMVQTEAQYRFIYMAVQHYIETLQRRLEHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LEU n 1 3 TYR n 1 4 SER n 1 5 ARG n 1 6 LYS n 1 7 GLU n 1 8 GLY n 1 9 GLN n 1 10 ARG n 1 11 GLN n 1 12 GLU n 1 13 ASN n 1 14 LYS n 1 15 ASN n 1 16 LYS n 1 17 ASN n 1 18 ARG n 1 19 TYR n 1 20 LYS n 1 21 ASN n 1 22 ILE n 1 23 LEU n 1 24 PRO n 1 25 PHE n 1 26 ASP n 1 27 HIS n 1 28 THR n 1 29 ARG n 1 30 VAL n 1 31 VAL n 1 32 LEU n 1 33 HIS n 1 34 ASP n 1 35 GLY n 1 36 ASP n 1 37 PRO n 1 38 ASN n 1 39 GLU n 1 40 PRO n 1 41 VAL n 1 42 SER n 1 43 ASP n 1 44 TYR n 1 45 ILE n 1 46 ASN n 1 47 ALA n 1 48 ASN n 1 49 ILE n 1 50 ILE n 1 51 MET n 1 52 PRO n 1 53 GLU n 1 54 PHE n 1 55 GLU n 1 56 THR n 1 57 LYS n 1 58 CYS n 1 59 ASN n 1 60 ASN n 1 61 SER n 1 62 LYS n 1 63 PRO n 1 64 LYS n 1 65 LYS n 1 66 SER n 1 67 TYR n 1 68 ILE n 1 69 ALA n 1 70 THR n 1 71 GLN n 1 72 GLY n 1 73 CYS n 1 74 LEU n 1 75 GLN n 1 76 ASN n 1 77 THR n 1 78 VAL n 1 79 ASN n 1 80 ASP n 1 81 PHE n 1 82 TRP n 1 83 ARG n 1 84 MET n 1 85 VAL n 1 86 PHE n 1 87 GLN n 1 88 GLU n 1 89 ASN n 1 90 SER n 1 91 ARG n 1 92 VAL n 1 93 ILE n 1 94 VAL n 1 95 MET n 1 96 THR n 1 97 THR n 1 98 LYS n 1 99 GLU n 1 100 VAL n 1 101 GLU n 1 102 ARG n 1 103 GLY n 1 104 LYS n 1 105 SER n 1 106 LYS n 1 107 CYS n 1 108 VAL n 1 109 LYS n 1 110 TYR n 1 111 TRP n 1 112 PRO n 1 113 ASP n 1 114 GLU n 1 115 TYR n 1 116 ALA n 1 117 LEU n 1 118 LYS n 1 119 GLU n 1 120 TYR n 1 121 GLY n 1 122 VAL n 1 123 MET n 1 124 ARG n 1 125 VAL n 1 126 ARG n 1 127 ASN n 1 128 VAL n 1 129 LYS n 1 130 GLU n 1 131 SER n 1 132 ALA n 1 133 ALA n 1 134 HIS n 1 135 ASP n 1 136 TYR n 1 137 THR n 1 138 LEU n 1 139 ARG n 1 140 GLU n 1 141 LEU n 1 142 LYS n 1 143 LEU n 1 144 SER n 1 145 LYS n 1 146 VAL n 1 147 GLY n 1 148 GLN n 1 149 GLY n 1 150 ASN n 1 151 THR n 1 152 GLU n 1 153 ARG n 1 154 THR n 1 155 VAL n 1 156 TRP n 1 157 GLN n 1 158 TYR n 1 159 HIS n 1 160 PHE n 1 161 ARG n 1 162 THR n 1 163 TRP n 1 164 PRO n 1 165 ASP n 1 166 HIS n 1 167 GLY n 1 168 VAL n 1 169 PRO n 1 170 SER n 1 171 ASP n 1 172 PRO n 1 173 GLY n 1 174 GLY n 1 175 VAL n 1 176 LEU n 1 177 ASP n 1 178 PHE n 1 179 LEU n 1 180 GLU n 1 181 GLU n 1 182 VAL n 1 183 HIS n 1 184 HIS n 1 185 LYS n 1 186 GLN n 1 187 GLU n 1 188 SER n 1 189 ILE n 1 190 MET n 1 191 ASP n 1 192 ALA n 1 193 GLY n 1 194 PRO n 1 195 VAL n 1 196 VAL n 1 197 VAL n 1 198 HIS n 1 199 CYS n 1 200 SER n 1 201 ALA n 1 202 GLY n 1 203 ILE n 1 204 GLY n 1 205 ARG n 1 206 THR n 1 207 GLY n 1 208 THR n 1 209 PHE n 1 210 ILE n 1 211 VAL n 1 212 ILE n 1 213 ASP n 1 214 ILE n 1 215 LEU n 1 216 ILE n 1 217 ASP n 1 218 ILE n 1 219 ILE n 1 220 ARG n 1 221 GLU n 1 222 LYS n 1 223 GLY n 1 224 VAL n 1 225 ASP n 1 226 CYS n 1 227 ASP n 1 228 ILE n 1 229 ASP n 1 230 VAL n 1 231 PRO n 1 232 LYS n 1 233 THR n 1 234 ILE n 1 235 GLN n 1 236 MET n 1 237 VAL n 1 238 ARG n 1 239 SER n 1 240 GLN n 1 241 ARG n 1 242 SER n 1 243 GLY n 1 244 MET n 1 245 VAL n 1 246 GLN n 1 247 THR n 1 248 GLU n 1 249 ALA n 1 250 GLN n 1 251 TYR n 1 252 ARG n 1 253 PHE n 1 254 ILE n 1 255 TYR n 1 256 MET n 1 257 ALA n 1 258 VAL n 1 259 GLN n 1 260 HIS n 1 261 TYR n 1 262 ILE n 1 263 GLU n 1 264 THR n 1 265 LEU n 1 266 GLN n 1 267 ARG n 1 268 ARG n 1 269 LEU n 1 270 GLU n 1 271 HIS n 1 272 HIS n 1 273 HIS n 1 274 HIS n 1 275 HIS n 1 276 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene PTPN11 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET21a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A8K1D9_HUMAN _struct_ref.pdbx_db_accession A8K1D9 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LYSRKEGQRQENKNKNRYKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFETKCNNSKPKKSYIATQGCLQNTVNDF WRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFR TWPDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQR SGMVQTEAQYRFIYMAVQHYIETLQRR ; _struct_ref.pdbx_align_begin 262 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3JRL _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 268 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A8K1D9 _struct_ref_seq.db_align_beg 262 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 528 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 262 _struct_ref_seq.pdbx_auth_seq_align_end 528 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3JRL MET A 1 ? UNP A8K1D9 ? ? 'EXPRESSION TAG' 261 1 1 3JRL LEU A 269 ? UNP A8K1D9 ? ? 'EXPRESSION TAG' 529 2 1 3JRL GLU A 270 ? UNP A8K1D9 ? ? 'EXPRESSION TAG' 530 3 1 3JRL HIS A 271 ? UNP A8K1D9 ? ? 'EXPRESSION TAG' 531 4 1 3JRL HIS A 272 ? UNP A8K1D9 ? ? 'EXPRESSION TAG' 532 5 1 3JRL HIS A 273 ? UNP A8K1D9 ? ? 'EXPRESSION TAG' 533 6 1 3JRL HIS A 274 ? UNP A8K1D9 ? ? 'EXPRESSION TAG' 534 7 1 3JRL HIS A 275 ? UNP A8K1D9 ? ? 'EXPRESSION TAG' 535 8 1 3JRL HIS A 276 ? UNP A8K1D9 ? ? 'EXPRESSION TAG' 536 9 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 JZG non-polymer . '3-{1-[3-(biphenyl-4-ylamino)-3-oxopropyl]-1H-1,2,3-triazol-4-yl}-6-hydroxy-1-methyl-2-phenyl-1H-indole-5-carboxylic acid' ? 'C33 H27 N5 O4' 557.599 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3JRL _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.21 _exptl_crystal.density_percent_sol 44.46 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '20%PEG3350,1%v/v Tacsimate pH7.0, 100mM NaCl, 100 mM HEPES, pH7.5 , VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 100 ? 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector ? _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date 2009-03-01 _diffrn_detector.details ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_scattering_type 1 1 M ? 'SINGLE WAVELENGTH' x-ray 2 1 M ? 'SINGLE WAVELENGTH' x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 23-ID-B' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 23-ID-B _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3JRL _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.69 _reflns.number_obs 26139 _reflns.number_all ? _reflns.percent_possible_obs 82.5 _reflns.pdbx_Rmerge_I_obs 0.112 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1,2 _reflns.pdbx_ordinal 1 # _refine.entry_id 3JRL _refine.ls_number_reflns_obs 18673 _refine.ls_number_reflns_all 19088 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50 _refine.ls_d_res_high 2.0 _refine.ls_percent_reflns_obs 97.8 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.195 _refine.ls_R_factor_R_free 0.251 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 717 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB entry 3B7O' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2075 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 42 _refine_hist.number_atoms_solvent 123 _refine_hist.number_atoms_total 2240 _refine_hist.d_res_high 2.0 _refine_hist.d_res_low 50 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.0063 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.23 ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 3JRL _struct.title 'Crystal structure of the oncogenic tyrosine phosphatase SHP2 complexed with a salicylic acid-based small molecule inhibitor' _struct.pdbx_descriptor 'Oncogenic tyrosine phosphatase SHP2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3JRL _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'Crystal, SHP2-IIB-08 complex, inhibitor, binding affinity, binding selectivity, Hydrolase, Receptor' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 6 ? ASN A 17 ? LYS A 266 ASN A 277 5 ? 12 HELX_P HELX_P2 2 THR A 77 ? GLU A 88 ? THR A 337 GLU A 348 1 ? 12 HELX_P HELX_P3 3 PRO A 172 ? SER A 188 ? PRO A 432 SER A 448 1 ? 17 HELX_P HELX_P4 4 GLY A 204 ? GLY A 223 ? GLY A 464 GLY A 483 1 ? 20 HELX_P HELX_P5 5 ASP A 229 ? SER A 239 ? ASP A 489 SER A 499 1 ? 11 HELX_P HELX_P6 6 THR A 247 ? GLN A 266 ? THR A 507 GLN A 526 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 47 ? ILE A 50 ? ALA A 307 ILE A 310 A 2 TYR A 67 ? GLN A 71 ? TYR A 327 GLN A 331 A 3 VAL A 195 ? CYS A 199 ? VAL A 455 CYS A 459 A 4 VAL A 92 ? MET A 95 ? VAL A 352 MET A 355 A 5 ARG A 153 ? PHE A 160 ? ARG A 413 PHE A 420 A 6 TYR A 136 ? LYS A 145 ? TYR A 396 LYS A 405 A 7 MET A 123 ? ALA A 132 ? MET A 383 ALA A 392 A 8 LEU A 117 ? TYR A 120 ? LEU A 377 TYR A 380 B 1 VAL A 100 ? GLU A 101 ? VAL A 360 GLU A 361 B 2 LYS A 104 ? SER A 105 ? LYS A 364 SER A 365 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 50 ? N ILE A 310 O TYR A 67 ? O TYR A 327 A 2 3 N ILE A 68 ? N ILE A 328 O VAL A 197 ? O VAL A 457 A 3 4 O VAL A 196 ? O VAL A 456 N VAL A 94 ? N VAL A 354 A 4 5 N ILE A 93 ? N ILE A 353 O TYR A 158 ? O TYR A 418 A 5 6 O HIS A 159 ? O HIS A 419 N THR A 137 ? N THR A 397 A 6 7 O LEU A 138 ? O LEU A 398 N SER A 131 ? N SER A 391 A 7 8 O MET A 123 ? O MET A 383 N TYR A 120 ? N TYR A 380 B 1 2 N GLU A 101 ? N GLU A 361 O LYS A 104 ? O LYS A 364 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 8 _struct_site.details 'BINDING SITE FOR RESIDUE JZG A 1' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 LYS A 64 ? LYS A 324 . ? 1_655 ? 2 AC1 8 ARG A 102 ? ARG A 362 . ? 1_555 ? 3 AC1 8 LYS A 104 ? LYS A 364 . ? 1_555 ? 4 AC1 8 TRP A 163 ? TRP A 423 . ? 1_555 ? 5 AC1 8 ARG A 205 ? ARG A 465 . ? 1_555 ? 6 AC1 8 GLU A 221 ? GLU A 481 . ? 1_655 ? 7 AC1 8 GLN A 250 ? GLN A 510 . ? 1_555 ? 8 AC1 8 HOH C . ? HOH A 537 . ? 1_555 ? # _database_PDB_matrix.entry_id 3JRL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3JRL _atom_sites.fract_transf_matrix[1][1] 0.025288 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003793 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013188 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020973 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 261 ? ? ? A . n A 1 2 LEU 2 262 262 LEU LEU A . n A 1 3 TYR 3 263 263 TYR TYR A . n A 1 4 SER 4 264 264 SER SER A . n A 1 5 ARG 5 265 265 ARG ARG A . n A 1 6 LYS 6 266 266 LYS LYS A . n A 1 7 GLU 7 267 267 GLU GLU A . n A 1 8 GLY 8 268 268 GLY GLY A . n A 1 9 GLN 9 269 269 GLN GLN A . n A 1 10 ARG 10 270 270 ARG ARG A . n A 1 11 GLN 11 271 271 GLN GLN A . n A 1 12 GLU 12 272 272 GLU GLU A . n A 1 13 ASN 13 273 273 ASN ASN A . n A 1 14 LYS 14 274 274 LYS LYS A . n A 1 15 ASN 15 275 275 ASN ASN A . n A 1 16 LYS 16 276 276 LYS LYS A . n A 1 17 ASN 17 277 277 ASN ASN A . n A 1 18 ARG 18 278 278 ARG ARG A . n A 1 19 TYR 19 279 279 TYR TYR A . n A 1 20 LYS 20 280 280 LYS LYS A . n A 1 21 ASN 21 281 281 ASN ASN A . n A 1 22 ILE 22 282 282 ILE ILE A . n A 1 23 LEU 23 283 283 LEU LEU A . n A 1 24 PRO 24 284 284 PRO PRO A . n A 1 25 PHE 25 285 285 PHE PHE A . n A 1 26 ASP 26 286 286 ASP ASP A . n A 1 27 HIS 27 287 287 HIS HIS A . n A 1 28 THR 28 288 288 THR THR A . n A 1 29 ARG 29 289 289 ARG ARG A . n A 1 30 VAL 30 290 290 VAL VAL A . n A 1 31 VAL 31 291 291 VAL VAL A . n A 1 32 LEU 32 292 292 LEU LEU A . n A 1 33 HIS 33 293 293 HIS HIS A . n A 1 34 ASP 34 294 294 ASP ASP A . n A 1 35 GLY 35 295 295 GLY GLY A . n A 1 36 ASP 36 296 296 ASP ASP A . n A 1 37 PRO 37 297 297 PRO PRO A . n A 1 38 ASN 38 298 298 ASN ASN A . n A 1 39 GLU 39 299 299 GLU GLU A . n A 1 40 PRO 40 300 300 PRO PRO A . n A 1 41 VAL 41 301 301 VAL VAL A . n A 1 42 SER 42 302 302 SER SER A . n A 1 43 ASP 43 303 303 ASP ASP A . n A 1 44 TYR 44 304 304 TYR TYR A . n A 1 45 ILE 45 305 305 ILE ILE A . n A 1 46 ASN 46 306 306 ASN ASN A . n A 1 47 ALA 47 307 307 ALA ALA A . n A 1 48 ASN 48 308 308 ASN ASN A . n A 1 49 ILE 49 309 309 ILE ILE A . n A 1 50 ILE 50 310 310 ILE ILE A . n A 1 51 MET 51 311 311 MET MET A . n A 1 52 PRO 52 312 312 PRO PRO A . n A 1 53 GLU 53 313 ? ? ? A . n A 1 54 PHE 54 314 ? ? ? A . n A 1 55 GLU 55 315 ? ? ? A . n A 1 56 THR 56 316 ? ? ? A . n A 1 57 LYS 57 317 ? ? ? A . n A 1 58 CYS 58 318 ? ? ? A . n A 1 59 ASN 59 319 ? ? ? A . n A 1 60 ASN 60 320 ? ? ? A . n A 1 61 SER 61 321 ? ? ? A . n A 1 62 LYS 62 322 ? ? ? A . n A 1 63 PRO 63 323 ? ? ? A . n A 1 64 LYS 64 324 324 LYS LYS A . n A 1 65 LYS 65 325 325 LYS LYS A . n A 1 66 SER 66 326 326 SER SER A . n A 1 67 TYR 67 327 327 TYR TYR A . n A 1 68 ILE 68 328 328 ILE ILE A . n A 1 69 ALA 69 329 329 ALA ALA A . n A 1 70 THR 70 330 330 THR THR A . n A 1 71 GLN 71 331 331 GLN GLN A . n A 1 72 GLY 72 332 332 GLY GLY A . n A 1 73 CYS 73 333 333 CYS CYS A . n A 1 74 LEU 74 334 334 LEU LEU A . n A 1 75 GLN 75 335 335 GLN GLN A . n A 1 76 ASN 76 336 336 ASN ASN A . n A 1 77 THR 77 337 337 THR THR A . n A 1 78 VAL 78 338 338 VAL VAL A . n A 1 79 ASN 79 339 339 ASN ASN A . n A 1 80 ASP 80 340 340 ASP ASP A . n A 1 81 PHE 81 341 341 PHE PHE A . n A 1 82 TRP 82 342 342 TRP TRP A . n A 1 83 ARG 83 343 343 ARG ARG A . n A 1 84 MET 84 344 344 MET MET A . n A 1 85 VAL 85 345 345 VAL VAL A . n A 1 86 PHE 86 346 346 PHE PHE A . n A 1 87 GLN 87 347 347 GLN GLN A . n A 1 88 GLU 88 348 348 GLU GLU A . n A 1 89 ASN 89 349 349 ASN ASN A . n A 1 90 SER 90 350 350 SER SER A . n A 1 91 ARG 91 351 351 ARG ARG A . n A 1 92 VAL 92 352 352 VAL VAL A . n A 1 93 ILE 93 353 353 ILE ILE A . n A 1 94 VAL 94 354 354 VAL VAL A . n A 1 95 MET 95 355 355 MET MET A . n A 1 96 THR 96 356 356 THR THR A . n A 1 97 THR 97 357 357 THR THR A . n A 1 98 LYS 98 358 358 LYS LYS A . n A 1 99 GLU 99 359 359 GLU GLU A . n A 1 100 VAL 100 360 360 VAL VAL A . n A 1 101 GLU 101 361 361 GLU GLU A . n A 1 102 ARG 102 362 362 ARG ARG A . n A 1 103 GLY 103 363 363 GLY GLY A . n A 1 104 LYS 104 364 364 LYS LYS A . n A 1 105 SER 105 365 365 SER SER A . n A 1 106 LYS 106 366 366 LYS LYS A . n A 1 107 CYS 107 367 367 CYS CYS A . n A 1 108 VAL 108 368 368 VAL VAL A . n A 1 109 LYS 109 369 369 LYS LYS A . n A 1 110 TYR 110 370 370 TYR TYR A . n A 1 111 TRP 111 371 371 TRP TRP A . n A 1 112 PRO 112 372 372 PRO PRO A . n A 1 113 ASP 113 373 373 ASP ASP A . n A 1 114 GLU 114 374 374 GLU GLU A . n A 1 115 TYR 115 375 375 TYR TYR A . n A 1 116 ALA 116 376 376 ALA ALA A . n A 1 117 LEU 117 377 377 LEU LEU A . n A 1 118 LYS 118 378 378 LYS LYS A . n A 1 119 GLU 119 379 379 GLU GLU A . n A 1 120 TYR 120 380 380 TYR TYR A . n A 1 121 GLY 121 381 381 GLY GLY A . n A 1 122 VAL 122 382 382 VAL VAL A . n A 1 123 MET 123 383 383 MET MET A . n A 1 124 ARG 124 384 384 ARG ARG A . n A 1 125 VAL 125 385 385 VAL VAL A . n A 1 126 ARG 126 386 386 ARG ARG A . n A 1 127 ASN 127 387 387 ASN ASN A . n A 1 128 VAL 128 388 388 VAL VAL A . n A 1 129 LYS 129 389 389 LYS LYS A . n A 1 130 GLU 130 390 390 GLU GLU A . n A 1 131 SER 131 391 391 SER SER A . n A 1 132 ALA 132 392 392 ALA ALA A . n A 1 133 ALA 133 393 393 ALA ALA A . n A 1 134 HIS 134 394 394 HIS HIS A . n A 1 135 ASP 135 395 395 ASP ASP A . n A 1 136 TYR 136 396 396 TYR TYR A . n A 1 137 THR 137 397 397 THR THR A . n A 1 138 LEU 138 398 398 LEU LEU A . n A 1 139 ARG 139 399 399 ARG ARG A . n A 1 140 GLU 140 400 400 GLU GLU A . n A 1 141 LEU 141 401 401 LEU LEU A . n A 1 142 LYS 142 402 402 LYS LYS A . n A 1 143 LEU 143 403 403 LEU LEU A . n A 1 144 SER 144 404 404 SER SER A . n A 1 145 LYS 145 405 405 LYS LYS A . n A 1 146 VAL 146 406 406 VAL VAL A . n A 1 147 GLY 147 407 407 GLY GLY A . n A 1 148 GLN 148 408 408 GLN GLN A . n A 1 149 GLY 149 409 409 GLY GLY A . n A 1 150 ASN 150 410 410 ASN ASN A . n A 1 151 THR 151 411 411 THR THR A . n A 1 152 GLU 152 412 412 GLU GLU A . n A 1 153 ARG 153 413 413 ARG ARG A . n A 1 154 THR 154 414 414 THR THR A . n A 1 155 VAL 155 415 415 VAL VAL A . n A 1 156 TRP 156 416 416 TRP TRP A . n A 1 157 GLN 157 417 417 GLN GLN A . n A 1 158 TYR 158 418 418 TYR TYR A . n A 1 159 HIS 159 419 419 HIS HIS A . n A 1 160 PHE 160 420 420 PHE PHE A . n A 1 161 ARG 161 421 421 ARG ARG A . n A 1 162 THR 162 422 422 THR THR A . n A 1 163 TRP 163 423 423 TRP TRP A . n A 1 164 PRO 164 424 424 PRO PRO A . n A 1 165 ASP 165 425 425 ASP ASP A . n A 1 166 HIS 166 426 426 HIS HIS A . n A 1 167 GLY 167 427 427 GLY GLY A . n A 1 168 VAL 168 428 428 VAL VAL A . n A 1 169 PRO 169 429 429 PRO PRO A . n A 1 170 SER 170 430 430 SER SER A . n A 1 171 ASP 171 431 431 ASP ASP A . n A 1 172 PRO 172 432 432 PRO PRO A . n A 1 173 GLY 173 433 433 GLY GLY A . n A 1 174 GLY 174 434 434 GLY GLY A . n A 1 175 VAL 175 435 435 VAL VAL A . n A 1 176 LEU 176 436 436 LEU LEU A . n A 1 177 ASP 177 437 437 ASP ASP A . n A 1 178 PHE 178 438 438 PHE PHE A . n A 1 179 LEU 179 439 439 LEU LEU A . n A 1 180 GLU 180 440 440 GLU GLU A . n A 1 181 GLU 181 441 441 GLU GLU A . n A 1 182 VAL 182 442 442 VAL VAL A . n A 1 183 HIS 183 443 443 HIS HIS A . n A 1 184 HIS 184 444 444 HIS HIS A . n A 1 185 LYS 185 445 445 LYS LYS A . n A 1 186 GLN 186 446 446 GLN GLN A . n A 1 187 GLU 187 447 447 GLU GLU A . n A 1 188 SER 188 448 448 SER SER A . n A 1 189 ILE 189 449 449 ILE ILE A . n A 1 190 MET 190 450 450 MET MET A . n A 1 191 ASP 191 451 451 ASP ASP A . n A 1 192 ALA 192 452 452 ALA ALA A . n A 1 193 GLY 193 453 453 GLY GLY A . n A 1 194 PRO 194 454 454 PRO PRO A . n A 1 195 VAL 195 455 455 VAL VAL A . n A 1 196 VAL 196 456 456 VAL VAL A . n A 1 197 VAL 197 457 457 VAL VAL A . n A 1 198 HIS 198 458 458 HIS HIS A . n A 1 199 CYS 199 459 459 CYS CYS A . n A 1 200 SER 200 460 460 SER SER A . n A 1 201 ALA 201 461 461 ALA ALA A . n A 1 202 GLY 202 462 462 GLY GLY A . n A 1 203 ILE 203 463 463 ILE ILE A . n A 1 204 GLY 204 464 464 GLY GLY A . n A 1 205 ARG 205 465 465 ARG ARG A . n A 1 206 THR 206 466 466 THR THR A . n A 1 207 GLY 207 467 467 GLY GLY A . n A 1 208 THR 208 468 468 THR THR A . n A 1 209 PHE 209 469 469 PHE PHE A . n A 1 210 ILE 210 470 470 ILE ILE A . n A 1 211 VAL 211 471 471 VAL VAL A . n A 1 212 ILE 212 472 472 ILE ILE A . n A 1 213 ASP 213 473 473 ASP ASP A . n A 1 214 ILE 214 474 474 ILE ILE A . n A 1 215 LEU 215 475 475 LEU LEU A . n A 1 216 ILE 216 476 476 ILE ILE A . n A 1 217 ASP 217 477 477 ASP ASP A . n A 1 218 ILE 218 478 478 ILE ILE A . n A 1 219 ILE 219 479 479 ILE ILE A . n A 1 220 ARG 220 480 480 ARG ARG A . n A 1 221 GLU 221 481 481 GLU GLU A . n A 1 222 LYS 222 482 482 LYS LYS A . n A 1 223 GLY 223 483 483 GLY GLY A . n A 1 224 VAL 224 484 484 VAL VAL A . n A 1 225 ASP 225 485 485 ASP ASP A . n A 1 226 CYS 226 486 486 CYS CYS A . n A 1 227 ASP 227 487 487 ASP ASP A . n A 1 228 ILE 228 488 488 ILE ILE A . n A 1 229 ASP 229 489 489 ASP ASP A . n A 1 230 VAL 230 490 490 VAL VAL A . n A 1 231 PRO 231 491 491 PRO PRO A . n A 1 232 LYS 232 492 492 LYS LYS A . n A 1 233 THR 233 493 493 THR THR A . n A 1 234 ILE 234 494 494 ILE ILE A . n A 1 235 GLN 235 495 495 GLN GLN A . n A 1 236 MET 236 496 496 MET MET A . n A 1 237 VAL 237 497 497 VAL VAL A . n A 1 238 ARG 238 498 498 ARG ARG A . n A 1 239 SER 239 499 499 SER SER A . n A 1 240 GLN 240 500 500 GLN GLN A . n A 1 241 ARG 241 501 501 ARG ARG A . n A 1 242 SER 242 502 502 SER SER A . n A 1 243 GLY 243 503 503 GLY GLY A . n A 1 244 MET 244 504 504 MET MET A . n A 1 245 VAL 245 505 505 VAL VAL A . n A 1 246 GLN 246 506 506 GLN GLN A . n A 1 247 THR 247 507 507 THR THR A . n A 1 248 GLU 248 508 508 GLU GLU A . n A 1 249 ALA 249 509 509 ALA ALA A . n A 1 250 GLN 250 510 510 GLN GLN A . n A 1 251 TYR 251 511 511 TYR TYR A . n A 1 252 ARG 252 512 512 ARG ARG A . n A 1 253 PHE 253 513 513 PHE PHE A . n A 1 254 ILE 254 514 514 ILE ILE A . n A 1 255 TYR 255 515 515 TYR TYR A . n A 1 256 MET 256 516 516 MET MET A . n A 1 257 ALA 257 517 517 ALA ALA A . n A 1 258 VAL 258 518 518 VAL VAL A . n A 1 259 GLN 259 519 519 GLN GLN A . n A 1 260 HIS 260 520 520 HIS HIS A . n A 1 261 TYR 261 521 521 TYR TYR A . n A 1 262 ILE 262 522 522 ILE ILE A . n A 1 263 GLU 263 523 523 GLU GLU A . n A 1 264 THR 264 524 524 THR THR A . n A 1 265 LEU 265 525 525 LEU LEU A . n A 1 266 GLN 266 526 526 GLN GLN A . n A 1 267 ARG 267 527 527 ARG ARG A . n A 1 268 ARG 268 528 ? ? ? A . n A 1 269 LEU 269 529 ? ? ? A . n A 1 270 GLU 270 530 ? ? ? A . n A 1 271 HIS 271 531 ? ? ? A . n A 1 272 HIS 272 532 ? ? ? A . n A 1 273 HIS 273 533 ? ? ? A . n A 1 274 HIS 274 534 ? ? ? A . n A 1 275 HIS 275 535 ? ? ? A . n A 1 276 HIS 276 536 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 JZG 1 1 1 JZG JZG A . C 3 HOH 1 2 2 HOH HOH A . C 3 HOH 2 3 3 HOH HOH A . C 3 HOH 3 4 4 HOH HOH A . C 3 HOH 4 5 5 HOH HOH A . C 3 HOH 5 6 6 HOH HOH A . C 3 HOH 6 7 7 HOH HOH A . C 3 HOH 7 8 8 HOH HOH A . C 3 HOH 8 9 9 HOH HOH A . C 3 HOH 9 10 10 HOH HOH A . C 3 HOH 10 11 11 HOH HOH A . C 3 HOH 11 12 12 HOH HOH A . C 3 HOH 12 13 13 HOH HOH A . C 3 HOH 13 14 14 HOH HOH A . C 3 HOH 14 15 15 HOH HOH A . C 3 HOH 15 16 16 HOH HOH A . C 3 HOH 16 17 17 HOH HOH A . C 3 HOH 17 18 18 HOH HOH A . C 3 HOH 18 19 19 HOH HOH A . C 3 HOH 19 20 20 HOH HOH A . C 3 HOH 20 21 21 HOH HOH A . C 3 HOH 21 22 22 HOH HOH A . C 3 HOH 22 23 23 HOH HOH A . C 3 HOH 23 24 24 HOH HOH A . C 3 HOH 24 25 25 HOH HOH A . C 3 HOH 25 26 26 HOH HOH A . C 3 HOH 26 27 27 HOH HOH A . C 3 HOH 27 28 28 HOH HOH A . C 3 HOH 28 29 29 HOH HOH A . C 3 HOH 29 30 30 HOH HOH A . C 3 HOH 30 31 31 HOH HOH A . C 3 HOH 31 32 32 HOH HOH A . C 3 HOH 32 33 33 HOH HOH A . C 3 HOH 33 34 34 HOH HOH A . C 3 HOH 34 35 35 HOH HOH A . C 3 HOH 35 36 36 HOH HOH A . C 3 HOH 36 37 37 HOH HOH A . C 3 HOH 37 38 38 HOH HOH A . C 3 HOH 38 39 39 HOH HOH A . C 3 HOH 39 40 40 HOH HOH A . C 3 HOH 40 41 41 HOH HOH A . C 3 HOH 41 42 42 HOH HOH A . C 3 HOH 42 43 43 HOH HOH A . C 3 HOH 43 44 44 HOH HOH A . C 3 HOH 44 45 45 HOH HOH A . C 3 HOH 45 46 46 HOH HOH A . C 3 HOH 46 47 47 HOH HOH A . C 3 HOH 47 48 48 HOH HOH A . C 3 HOH 48 49 49 HOH HOH A . C 3 HOH 49 50 50 HOH HOH A . C 3 HOH 50 51 51 HOH HOH A . C 3 HOH 51 52 52 HOH HOH A . C 3 HOH 52 53 53 HOH HOH A . C 3 HOH 53 54 54 HOH HOH A . C 3 HOH 54 55 55 HOH HOH A . C 3 HOH 55 56 56 HOH HOH A . C 3 HOH 56 57 57 HOH HOH A . C 3 HOH 57 58 58 HOH HOH A . C 3 HOH 58 59 59 HOH HOH A . C 3 HOH 59 60 60 HOH HOH A . C 3 HOH 60 61 61 HOH HOH A . C 3 HOH 61 62 62 HOH HOH A . C 3 HOH 62 63 63 HOH HOH A . C 3 HOH 63 64 64 HOH HOH A . C 3 HOH 64 65 65 HOH HOH A . C 3 HOH 65 66 66 HOH HOH A . C 3 HOH 66 67 67 HOH HOH A . C 3 HOH 67 68 68 HOH HOH A . C 3 HOH 68 69 69 HOH HOH A . C 3 HOH 69 70 70 HOH HOH A . C 3 HOH 70 71 71 HOH HOH A . C 3 HOH 71 72 72 HOH HOH A . C 3 HOH 72 73 73 HOH HOH A . C 3 HOH 73 74 74 HOH HOH A . C 3 HOH 74 75 75 HOH HOH A . C 3 HOH 75 76 76 HOH HOH A . C 3 HOH 76 77 77 HOH HOH A . C 3 HOH 77 78 78 HOH HOH A . C 3 HOH 78 79 79 HOH HOH A . C 3 HOH 79 80 80 HOH HOH A . C 3 HOH 80 81 81 HOH HOH A . C 3 HOH 81 82 82 HOH HOH A . C 3 HOH 82 83 83 HOH HOH A . C 3 HOH 83 84 84 HOH HOH A . C 3 HOH 84 85 85 HOH HOH A . C 3 HOH 85 86 86 HOH HOH A . C 3 HOH 86 87 87 HOH HOH A . C 3 HOH 87 88 88 HOH HOH A . C 3 HOH 88 89 89 HOH HOH A . C 3 HOH 89 90 90 HOH HOH A . C 3 HOH 90 91 91 HOH HOH A . C 3 HOH 91 92 92 HOH HOH A . C 3 HOH 92 93 93 HOH HOH A . C 3 HOH 93 94 94 HOH HOH A . C 3 HOH 94 95 95 HOH HOH A . C 3 HOH 95 96 96 HOH HOH A . C 3 HOH 96 97 97 HOH HOH A . C 3 HOH 97 98 98 HOH HOH A . C 3 HOH 98 99 99 HOH HOH A . C 3 HOH 99 100 100 HOH HOH A . C 3 HOH 100 101 101 HOH HOH A . C 3 HOH 101 102 102 HOH HOH A . C 3 HOH 102 103 103 HOH HOH A . C 3 HOH 103 104 104 HOH HOH A . C 3 HOH 104 105 105 HOH HOH A . C 3 HOH 105 106 106 HOH HOH A . C 3 HOH 106 107 107 HOH HOH A . C 3 HOH 107 108 108 HOH HOH A . C 3 HOH 108 109 109 HOH HOH A . C 3 HOH 109 110 110 HOH HOH A . C 3 HOH 110 111 111 HOH HOH A . C 3 HOH 111 112 112 HOH HOH A . C 3 HOH 112 113 113 HOH HOH A . C 3 HOH 113 114 114 HOH HOH A . C 3 HOH 114 115 115 HOH HOH A . C 3 HOH 115 116 116 HOH HOH A . C 3 HOH 116 117 117 HOH HOH A . C 3 HOH 117 118 118 HOH HOH A . C 3 HOH 118 119 119 HOH HOH A . C 3 HOH 119 120 120 HOH HOH A . C 3 HOH 120 121 121 HOH HOH A . C 3 HOH 121 122 122 HOH HOH A . C 3 HOH 122 123 123 HOH HOH A . C 3 HOH 123 537 1 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-03-02 2 'Structure model' 1 1 2010-08-11 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 AMoRE 'model building' . ? 2 CNS refinement 1.1 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 AMoRE phasing . ? 6 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 265 ? ? -141.39 46.40 2 1 ASP A 294 ? ? 53.25 70.47 3 1 CYS A 367 ? ? -176.73 126.57 4 1 TYR A 375 ? ? 71.03 -6.59 5 1 LYS A 389 ? ? -174.11 132.26 6 1 ALA A 393 ? ? -120.44 -165.60 7 1 HIS A 394 ? ? -54.52 -86.41 8 1 ASN A 410 ? ? -116.48 52.71 9 1 ILE A 463 ? ? -135.93 -39.25 10 1 ARG A 501 ? ? -167.98 116.39 11 1 VAL A 505 ? ? 73.53 101.58 12 1 GLN A 526 ? ? -63.30 13.65 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 527 ? CD ? A ARG 267 CD 2 1 Y 1 A ARG 527 ? NE ? A ARG 267 NE 3 1 Y 1 A ARG 527 ? CZ ? A ARG 267 CZ 4 1 Y 1 A ARG 527 ? NH1 ? A ARG 267 NH1 5 1 Y 1 A ARG 527 ? NH2 ? A ARG 267 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 261 ? A MET 1 2 1 Y 1 A GLU 313 ? A GLU 53 3 1 Y 1 A PHE 314 ? A PHE 54 4 1 Y 1 A GLU 315 ? A GLU 55 5 1 Y 1 A THR 316 ? A THR 56 6 1 Y 1 A LYS 317 ? A LYS 57 7 1 Y 1 A CYS 318 ? A CYS 58 8 1 Y 1 A ASN 319 ? A ASN 59 9 1 Y 1 A ASN 320 ? A ASN 60 10 1 Y 1 A SER 321 ? A SER 61 11 1 Y 1 A LYS 322 ? A LYS 62 12 1 Y 1 A PRO 323 ? A PRO 63 13 1 Y 1 A ARG 528 ? A ARG 268 14 1 Y 1 A LEU 529 ? A LEU 269 15 1 Y 1 A GLU 530 ? A GLU 270 16 1 Y 1 A HIS 531 ? A HIS 271 17 1 Y 1 A HIS 532 ? A HIS 272 18 1 Y 1 A HIS 533 ? A HIS 273 19 1 Y 1 A HIS 534 ? A HIS 274 20 1 Y 1 A HIS 535 ? A HIS 275 21 1 Y 1 A HIS 536 ? A HIS 276 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '3-{1-[3-(biphenyl-4-ylamino)-3-oxopropyl]-1H-1,2,3-triazol-4-yl}-6-hydroxy-1-methyl-2-phenyl-1H-indole-5-carboxylic acid' JZG 3 water HOH #