HEADER HYDROLASE 09-SEP-09 3JS5 TITLE CRYSTAL STRUCTURE OF PROTEIN TYROSINE PHOSPHATASE FROM ENTAMOEBA TITLE 2 HISTOLYTICA WITH HEPES IN THE ACTIVE SITE. HIGH RESOLUTION, TITLE 3 ALTERNATIVE CRYSTAL FORM WITH 1 MOLECULE IN ASYMMETRIC UNIT COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN TYROSINE PHOSPHATASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTAMOEBA HISTOLYTICA; SOURCE 3 ORGANISM_TAXID: 294381; SOURCE 4 STRAIN: HM-1:IMSS; SOURCE 5 GENE: EHI_153650; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: AVA0421 KEYWDS NIAID, SSGCID, SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS KEYWDS 2 DISEASE, PARASITIC PROTOZOAN, DYSENTERY, PHOSPHOTYROSINE, KEYWDS 3 PHOSPHATASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 6 06-SEP-23 3JS5 1 REMARK SEQADV LINK REVDAT 5 01-NOV-17 3JS5 1 REMARK REVDAT 4 09-APR-14 3JS5 1 JRNL REVDAT 3 12-MAR-14 3JS5 1 JRNL REVDAT 2 13-JUL-11 3JS5 1 VERSN REVDAT 1 22-SEP-09 3JS5 0 JRNL AUTH A.S.LINFORD,N.M.JIANG,T.E.EDWARDS,N.E.SHERMAN, JRNL AUTH 2 W.C.VAN VOORHIS,L.J.STEWART,P.J.MYLER,B.L.STAKER,W.A.PETRI JRNL TITL CRYSTAL STRUCTURE AND PUTATIVE SUBSTRATE IDENTIFICATION FOR JRNL TITL 2 THE ENTAMOEBA HISTOLYTICA LOW MOLECULAR WEIGHT TYROSINE JRNL TITL 3 PHOSPHATASE. JRNL REF MOL.BIOCHEM.PARASITOL. V. 193 33 2014 JRNL REFN ISSN 0166-6851 JRNL PMID 24548880 JRNL DOI 10.1016/J.MOLBIOPARA.2014.01.003 REMARK 2 REMARK 2 RESOLUTION. 1.94 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.94 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.24 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 12657 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 643 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.94 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.99 REMARK 3 REFLECTION IN BIN (WORKING SET) : 729 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 82.69 REMARK 3 BIN R VALUE (WORKING SET) : 0.2150 REMARK 3 BIN FREE R VALUE SET COUNT : 45 REMARK 3 BIN FREE R VALUE : 0.2440 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1245 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 16 REMARK 3 SOLVENT ATOMS : 164 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.11000 REMARK 3 B22 (A**2) : -0.62000 REMARK 3 B33 (A**2) : 0.51000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.159 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.145 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.092 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.815 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1288 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1734 ; 1.087 ; 1.974 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 157 ; 5.335 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 61 ;27.049 ;24.426 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 234 ;12.801 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;12.480 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 185 ; 0.077 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 960 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 778 ; 0.500 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1257 ; 0.965 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 510 ; 1.636 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 476 ; 2.663 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 49 REMARK 3 ORIGIN FOR THE GROUP (A): -18.0296 9.3309 -5.0678 REMARK 3 T TENSOR REMARK 3 T11: 0.0740 T22: 0.0454 REMARK 3 T33: 0.0425 T12: -0.0121 REMARK 3 T13: -0.0058 T23: 0.0019 REMARK 3 L TENSOR REMARK 3 L11: 0.5486 L22: 1.9170 REMARK 3 L33: 0.5785 L12: 0.6998 REMARK 3 L13: -0.0513 L23: -0.4679 REMARK 3 S TENSOR REMARK 3 S11: 0.0018 S12: 0.0274 S13: 0.0005 REMARK 3 S21: 0.1503 S22: -0.0266 S23: -0.0126 REMARK 3 S31: -0.0298 S32: 0.0590 S33: 0.0249 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 50 A 92 REMARK 3 ORIGIN FOR THE GROUP (A): -17.4246 10.5212 -8.9752 REMARK 3 T TENSOR REMARK 3 T11: 0.0530 T22: 0.0530 REMARK 3 T33: 0.0219 T12: -0.0176 REMARK 3 T13: -0.0115 T23: 0.0122 REMARK 3 L TENSOR REMARK 3 L11: 1.5063 L22: 1.4237 REMARK 3 L33: 0.3349 L12: 0.0296 REMARK 3 L13: 0.2208 L23: 0.4240 REMARK 3 S TENSOR REMARK 3 S11: 0.0052 S12: 0.0335 S13: -0.0196 REMARK 3 S21: 0.0290 S22: -0.0068 S23: -0.0859 REMARK 3 S31: -0.0847 S32: 0.0354 S33: 0.0016 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 93 A 120 REMARK 3 ORIGIN FOR THE GROUP (A): -13.5531 0.8032 -16.2196 REMARK 3 T TENSOR REMARK 3 T11: 0.0833 T22: 0.0873 REMARK 3 T33: 0.0613 T12: 0.0347 REMARK 3 T13: 0.0133 T23: -0.0570 REMARK 3 L TENSOR REMARK 3 L11: 3.9220 L22: 1.0800 REMARK 3 L33: 0.3266 L12: 0.1145 REMARK 3 L13: 0.6383 L23: 0.0911 REMARK 3 S TENSOR REMARK 3 S11: 0.1082 S12: 0.1590 S13: -0.1398 REMARK 3 S21: -0.1445 S22: -0.0253 S23: -0.1184 REMARK 3 S31: 0.1040 S32: 0.1325 S33: -0.0830 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 121 A 155 REMARK 3 ORIGIN FOR THE GROUP (A): -25.0210 4.9143 -12.8600 REMARK 3 T TENSOR REMARK 3 T11: 0.0632 T22: 0.0806 REMARK 3 T33: 0.0404 T12: -0.0066 REMARK 3 T13: 0.0057 T23: -0.0152 REMARK 3 L TENSOR REMARK 3 L11: 0.4067 L22: 2.2230 REMARK 3 L33: 0.8065 L12: -0.3825 REMARK 3 L13: 0.2812 L23: -0.2152 REMARK 3 S TENSOR REMARK 3 S11: 0.0158 S12: 0.1461 S13: -0.0373 REMARK 3 S21: 0.0776 S22: -0.0200 S23: 0.1348 REMARK 3 S31: 0.0484 S32: -0.0007 S33: 0.0042 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. U VALUES: RESIDUAL ONLY. REMARK 4 REMARK 4 3JS5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-SEP-09. REMARK 100 THE DEPOSITION ID IS D_1000055090. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JUL-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12697 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.940 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.94 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.20 REMARK 200 R MERGE FOR SHELL (I) : 0.19800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3IDO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PACT SCREEN CONDITION E6, 20% PEG REMARK 280 3350, 0.2 M SODIUM FORMATE. 0.4:0.4 MICROLITER DROPS. 31.7 MG/ML REMARK 280 PROTEIN IN 25 MM HEPES PH 7.0, 0.3 M NACL, 10% GLYCEROL, 2 MM REMARK 280 DTT. CRYSTAL TRACKING ID 204749E6, EXPRESSION TAG NOT REMOVED REMARK 280 PRIOR TO CRYSTALLIZATION, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 19.21650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 36.11450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.09750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 36.11450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 19.21650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.09750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 ALA A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 MET A -12 REMARK 465 GLY A -11 REMARK 465 THR A -10 REMARK 465 LEU A -9 REMARK 465 GLU A -8 REMARK 465 ALA A -7 REMARK 465 GLN A -6 REMARK 465 THR A -5 REMARK 465 GLN A -4 REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 465 ILE A 156 REMARK 465 ASN A 157 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 32 CG CD OE1 OE2 REMARK 470 LYS A 130 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 7 -155.45 -121.41 REMARK 500 CYS A 12 -70.94 -112.68 REMARK 500 THR A 115 -55.30 -123.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 200 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ILE A 68 O REMARK 620 2 HOH A 165 O 84.8 REMARK 620 3 HOH A 183 O 88.7 101.3 REMARK 620 4 HOH A 310 O 165.9 87.8 104.4 REMARK 620 5 HOH A 311 O 88.0 149.1 108.6 92.4 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE A 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3IDO RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PROTEIN TYROSINE PHOSPHATASE FROM ENTAMOEBA REMARK 900 HISTOLYTICA WITH A PHOSPHOTYROSINE CRUDE MIMIC HEPES MOLECULE IN REMARK 900 THE ACTIVE SITE, 2 MOLECULES IN ASYMMETRIC UNIT REMARK 900 RELATED ID: 3ILY RELATED DB: PDB REMARK 900 APO CRYSTAL STRUCTURE OF PROTEIN TYROSINE PHOSPHATASE FROM REMARK 900 ENTAMOEBA HISTOLYTICA FEATURING A DISORDERED ACTIVE SITE REMARK 900 RELATED ID: SSGCID-ENHIA.01424.B RELATED DB: TARGETDB DBREF 3JS5 A 1 157 UNP C4LSE7 C4LSE7_ENTHI 1 157 SEQADV 3JS5 MET A -20 UNP C4LSE7 EXPRESSION TAG SEQADV 3JS5 ALA A -19 UNP C4LSE7 EXPRESSION TAG SEQADV 3JS5 HIS A -18 UNP C4LSE7 EXPRESSION TAG SEQADV 3JS5 HIS A -17 UNP C4LSE7 EXPRESSION TAG SEQADV 3JS5 HIS A -16 UNP C4LSE7 EXPRESSION TAG SEQADV 3JS5 HIS A -15 UNP C4LSE7 EXPRESSION TAG SEQADV 3JS5 HIS A -14 UNP C4LSE7 EXPRESSION TAG SEQADV 3JS5 HIS A -13 UNP C4LSE7 EXPRESSION TAG SEQADV 3JS5 MET A -12 UNP C4LSE7 EXPRESSION TAG SEQADV 3JS5 GLY A -11 UNP C4LSE7 EXPRESSION TAG SEQADV 3JS5 THR A -10 UNP C4LSE7 EXPRESSION TAG SEQADV 3JS5 LEU A -9 UNP C4LSE7 EXPRESSION TAG SEQADV 3JS5 GLU A -8 UNP C4LSE7 EXPRESSION TAG SEQADV 3JS5 ALA A -7 UNP C4LSE7 EXPRESSION TAG SEQADV 3JS5 GLN A -6 UNP C4LSE7 EXPRESSION TAG SEQADV 3JS5 THR A -5 UNP C4LSE7 EXPRESSION TAG SEQADV 3JS5 GLN A -4 UNP C4LSE7 EXPRESSION TAG SEQADV 3JS5 GLY A -3 UNP C4LSE7 EXPRESSION TAG SEQADV 3JS5 PRO A -2 UNP C4LSE7 EXPRESSION TAG SEQADV 3JS5 GLY A -1 UNP C4LSE7 EXPRESSION TAG SEQADV 3JS5 SER A 0 UNP C4LSE7 EXPRESSION TAG SEQRES 1 A 178 MET ALA HIS HIS HIS HIS HIS HIS MET GLY THR LEU GLU SEQRES 2 A 178 ALA GLN THR GLN GLY PRO GLY SER MET LYS LEU LEU PHE SEQRES 3 A 178 VAL CYS LEU GLY ASN ILE CYS ARG SER PRO ALA ALA GLU SEQRES 4 A 178 ALA VAL MET LYS LYS VAL ILE GLN ASN HIS HIS LEU THR SEQRES 5 A 178 GLU LYS TYR ILE CYS ASP SER ALA GLY THR CYS SER TYR SEQRES 6 A 178 HIS GLU GLY GLN GLN ALA ASP SER ARG MET ARG LYS VAL SEQRES 7 A 178 GLY LYS SER ARG GLY TYR GLN VAL ASP SER ILE SER ARG SEQRES 8 A 178 PRO VAL VAL SER SER ASP PHE LYS ASN PHE ASP TYR ILE SEQRES 9 A 178 PHE ALA MET ASP ASN ASP ASN TYR TYR GLU LEU LEU ASP SEQRES 10 A 178 ARG CYS PRO GLU GLN TYR LYS GLN LYS ILE PHE LYS MET SEQRES 11 A 178 VAL ASP PHE CYS THR THR ILE LYS THR THR GLU VAL PRO SEQRES 12 A 178 ASP PRO TYR TYR GLY GLY GLU LYS GLY PHE HIS ARG VAL SEQRES 13 A 178 ILE ASP ILE LEU GLU ASP ALA CYS GLU ASN LEU ILE ILE SEQRES 14 A 178 LYS LEU GLU GLU GLY LYS LEU ILE ASN HET NA A 200 1 HET EPE A 201 15 HETNAM NA SODIUM ION HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETSYN EPE HEPES FORMUL 2 NA NA 1+ FORMUL 3 EPE C8 H18 N2 O4 S FORMUL 4 HOH *164(H2 O) HELIX 1 1 CYS A 12 HIS A 28 1 17 HELIX 2 2 ASP A 51 ARG A 61 1 11 HELIX 3 3 SER A 75 PHE A 80 1 6 HELIX 4 4 ASP A 87 CYS A 98 1 12 HELIX 5 5 PRO A 99 GLN A 104 5 6 HELIX 6 6 VAL A 110 CYS A 113 5 4 HELIX 7 7 GLY A 128 GLU A 152 1 25 SHEET 1 A 4 TYR A 34 GLY A 40 0 SHEET 2 A 4 MET A 1 CYS A 7 1 N LEU A 3 O ILE A 35 SHEET 3 A 4 TYR A 82 ALA A 85 1 O PHE A 84 N VAL A 6 SHEET 4 A 4 ILE A 106 LYS A 108 1 O PHE A 107 N ALA A 85 LINK O ILE A 68 NA NA A 200 1555 1555 2.48 LINK O HOH A 165 NA NA A 200 1555 1555 2.43 LINK O HOH A 183 NA NA A 200 1555 1555 2.43 LINK NA NA A 200 O HOH A 310 1555 1555 2.30 LINK NA NA A 200 O HOH A 311 1555 1555 2.30 SITE 1 AC1 5 ILE A 68 HOH A 165 HOH A 183 HOH A 310 SITE 2 AC1 5 HOH A 311 SITE 1 AC2 16 CYS A 7 LEU A 8 GLY A 9 ASN A 10 SITE 2 AC2 16 ILE A 11 CYS A 12 ARG A 13 TYR A 44 SITE 3 AC2 16 HIS A 45 ASP A 111 CYS A 113 ASP A 123 SITE 4 AC2 16 TYR A 125 TYR A 126 HOH A 167 HOH A 234 CRYST1 38.433 60.195 72.229 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026019 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016613 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013845 0.00000