HEADER BIOSYNTHETIC PROTEIN 15-SEP-09 3JUQ TITLE CRYSTAL STRUCTURE OF PHZA/B FROM BURKHOLDERIA CEPACIA R18194 TITLE 2 COCRYSTALLIZED WITH 2 MM RACEMIC 5-BROMO-2-(PIPERIDIN-3-YLAMINO) TITLE 3 BENZOIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHENAZINE BIOSYNTHESIS PROTEIN A/B; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA SP.; SOURCE 3 ORGANISM_COMMON: BURKHOLDERIA CEPACIA (STRAIN ATCC 17760 / NCIB 9086 SOURCE 4 / R18194); SOURCE 5 ORGANISM_TAXID: 269483; SOURCE 6 STRAIN: 383; SOURCE 7 GENE: BCEP18194_B1568; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: ROSETTA2(DE3) PLYSS; SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS CHIRALITY, DRUG DESIGN, PHENAZINE BIOSYNTHESIS, RACEMATE, RACEMIC KEYWDS 2 MIXTURE, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.MENTEL,R.BREINBAUER,W.BLANKENFELDT REVDAT 4 21-FEB-24 3JUQ 1 REMARK SEQADV REVDAT 3 13-JUL-11 3JUQ 1 VERSN REVDAT 2 17-NOV-09 3JUQ 1 JRNL REVDAT 1 29-SEP-09 3JUQ 0 JRNL AUTH M.MENTEL,W.BLANKENFELDT,R.BREINBAUER JRNL TITL THE ACTIVE SITE OF AN ENZYME CAN HOST BOTH ENANTIOMERS OF A JRNL TITL 2 RACEMIC LIGAND SIMULTANEOUSLY JRNL REF ANGEW.CHEM.INT.ED.ENGL. V. 48 9084 2009 JRNL REFN ISSN 1433-7851 JRNL PMID 19876985 JRNL DOI 10.1002/ANIE.200902997 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH E.G.AHUJA,P.JANNING,A.GRAEBSCH,R.BREINBAUER,W.HILLER, REMARK 1 AUTH 2 B.COSTISELLA,L.S.THOMASHOW,D.V.MAVRODI,W.BLANKENFELDT REMARK 1 TITL PHZA/B CATALYZES THE FORMATION OF THE TRICYCLE IN PHENAZINE REMARK 1 TITL 2 BIOSYNTHESIS REMARK 1 REF J.AM.CHEM.SOC. V. 130 17053 2008 REMARK 1 REFN ISSN 0002-7863 REMARK 1 PMID 19053436 REMARK 1 DOI 10.1021/JA806325K REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0070 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.61 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 39771 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1987 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.80 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2717 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2000 REMARK 3 BIN FREE R VALUE SET COUNT : 155 REMARK 3 BIN FREE R VALUE : 0.2320 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2591 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 68 REMARK 3 SOLVENT ATOMS : 231 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 39.34 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.95000 REMARK 3 B22 (A**2) : 0.95000 REMARK 3 B33 (A**2) : -1.42000 REMARK 3 B12 (A**2) : 0.47000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.104 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.107 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.075 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.188 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.953 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2871 ; 0.025 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 2061 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3900 ; 1.931 ; 1.940 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4815 ; 0.976 ; 3.007 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 331 ; 6.161 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 167 ;35.049 ;22.695 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 452 ;14.348 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 34 ;17.611 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 369 ; 0.132 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3263 ; 0.012 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 671 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1581 ; 1.292 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 647 ; 0.495 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2554 ; 2.233 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1290 ; 3.537 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1336 ; 5.425 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 9 A 164 REMARK 3 RESIDUE RANGE : A 500 A 600 REMARK 3 RESIDUE RANGE : A 166 A 282 REMARK 3 ORIGIN FOR THE GROUP (A): 43.0979 0.5280 86.1867 REMARK 3 T TENSOR REMARK 3 T11: 0.0294 T22: 0.0347 REMARK 3 T33: 0.0974 T12: 0.0109 REMARK 3 T13: -0.0300 T23: 0.0035 REMARK 3 L TENSOR REMARK 3 L11: 1.3531 L22: 1.6281 REMARK 3 L33: 2.8854 L12: -0.0371 REMARK 3 L13: -0.1405 L23: -0.8359 REMARK 3 S TENSOR REMARK 3 S11: 0.0142 S12: -0.0681 S13: 0.0041 REMARK 3 S21: 0.1336 S22: -0.0803 S23: -0.2920 REMARK 3 S31: 0.0904 S32: 0.1259 S33: 0.0661 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 8 B 163 REMARK 3 RESIDUE RANGE : B 500 B 600 REMARK 3 RESIDUE RANGE : B 166 B 279 REMARK 3 ORIGIN FOR THE GROUP (A): 29.9552 11.0466 72.2817 REMARK 3 T TENSOR REMARK 3 T11: 0.0291 T22: 0.1116 REMARK 3 T33: 0.0635 T12: 0.0177 REMARK 3 T13: -0.0005 T23: 0.0353 REMARK 3 L TENSOR REMARK 3 L11: 1.5093 L22: 2.2440 REMARK 3 L33: 1.8645 L12: -0.0908 REMARK 3 L13: 0.5801 L23: -0.8891 REMARK 3 S TENSOR REMARK 3 S11: -0.0648 S12: 0.0825 S13: 0.0789 REMARK 3 S21: -0.0993 S22: 0.1955 S23: 0.1210 REMARK 3 S31: -0.0297 S32: -0.3379 S33: -0.1307 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 3 U VALUES: RESIDUAL ONLY REMARK 4 REMARK 4 3JUQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-SEP-09. REMARK 100 THE DEPOSITION ID IS D_1000055183. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-OCT-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98407 REMARK 200 MONOCHROMATOR : SI(111) MONOCHROMATOR REMARK 200 OPTICS : SI(111) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 75067 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 19.610 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.10900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.3700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.03000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 28% (W/V) PEG3350, 0.2 M NH4OAC, 0.1 M REMARK 280 BIS-TRIS PH 6.1-6.7; COMPLEX PREPARED BY COCRYSTALLIZATION WITH REMARK 280 2 MM RACEMIC 5-BROMO-2-(PIPERIDIN-3-YLAMINO)BENZOIC ACID, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 284K, PH 6.8 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 107.01333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 53.50667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 53.50667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 107.01333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14790 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ASP A 3 REMARK 465 VAL A 4 REMARK 465 GLU A 5 REMARK 465 SER A 6 REMARK 465 LEU A 7 REMARK 465 GLU A 8 REMARK 465 SER A 165 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 ASP B 3 REMARK 465 VAL B 4 REMARK 465 GLU B 5 REMARK 465 SER B 6 REMARK 465 LEU B 7 REMARK 465 PRO B 164 REMARK 465 SER B 165 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 9 CG OD1 ND2 REMARK 470 GLU B 8 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 219 O HOH A 249 1.92 REMARK 500 O HOH A 235 O HOH A 251 2.09 REMARK 500 NE2 GLN A 29 O HOH A 232 2.12 REMARK 500 OE2 GLU B 28 O HOH B 274 2.14 REMARK 500 O HOH A 233 O HOH B 237 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 247 O HOH B 263 5556 1.97 REMARK 500 NH1 ARG B 34 O HOH A 215 4656 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 107 CB GLU A 107 CG -0.161 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 83 CB - CG - OD1 ANGL. DEV. = 7.4 DEGREES REMARK 500 ARG A 149 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 ARG B 24 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ASP B 48 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 ARG B 67 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG B 160 73.27 -114.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AJD A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AKD A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AJD B 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AKD B 600 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3JUM RELATED DB: PDB REMARK 900 RELATED ID: 3JUN RELATED DB: PDB REMARK 900 RELATED ID: 3JUO RELATED DB: PDB REMARK 900 RELATED ID: 3JUP RELATED DB: PDB DBREF 3JUQ A 1 165 UNP Q396C9 Q396C9_BURS3 1 165 DBREF 3JUQ B 1 165 UNP Q396C9 Q396C9_BURS3 1 165 SEQADV 3JUQ MET A -19 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ GLY A -18 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ SER A -17 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ SER A -16 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ HIS A -15 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ HIS A -14 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ HIS A -13 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ HIS A -12 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ HIS A -11 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ HIS A -10 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ SER A -9 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ SER A -8 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ GLY A -7 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ LEU A -6 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ VAL A -5 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ PRO A -4 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ ARG A -3 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ GLY A -2 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ SER A -1 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ HIS A 0 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ MET B -19 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ GLY B -18 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ SER B -17 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ SER B -16 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ HIS B -15 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ HIS B -14 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ HIS B -13 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ HIS B -12 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ HIS B -11 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ HIS B -10 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ SER B -9 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ SER B -8 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ GLY B -7 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ LEU B -6 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ VAL B -5 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ PRO B -4 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ ARG B -3 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ GLY B -2 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ SER B -1 UNP Q396C9 EXPRESSION TAG SEQADV 3JUQ HIS B 0 UNP Q396C9 EXPRESSION TAG SEQRES 1 A 185 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 185 LEU VAL PRO ARG GLY SER HIS MET SER ASP VAL GLU SER SEQRES 3 A 185 LEU GLU ASN THR SER GLU ASN ARG ALA GLN VAL ALA ALA SEQRES 4 A 185 ARG GLN HIS ASN ARG LYS ILE VAL GLU GLN TYR MET HIS SEQRES 5 A 185 THR ARG GLY GLU ALA ARG LEU LYS ARG HIS LEU LEU PHE SEQRES 6 A 185 THR GLU ASP GLY VAL GLY GLY LEU TRP THR THR ASP SER SEQRES 7 A 185 GLY GLN PRO ILE ALA ILE ARG GLY ARG GLU LYS LEU GLY SEQRES 8 A 185 GLU HIS ALA VAL TRP SER LEU GLN CYS PHE PRO ASP TRP SEQRES 9 A 185 VAL TRP THR ASP ILE GLN ILE PHE GLU THR GLN ASP PRO SEQRES 10 A 185 ASN TRP PHE TRP VAL GLU CYS ARG GLY GLU GLY ALA ILE SEQRES 11 A 185 VAL PHE PRO GLY TYR PRO ARG GLY GLN TYR ARG ASN HIS SEQRES 12 A 185 PHE LEU HIS SER PHE ARG PHE GLU ASN GLY LEU ILE LYS SEQRES 13 A 185 GLU GLN ARG GLU PHE MET ASN PRO CYS GLU GLN PHE ARG SEQRES 14 A 185 SER LEU GLY ILE GLU VAL PRO GLU VAL ARG ARG ASP GLY SEQRES 15 A 185 LEU PRO SER SEQRES 1 B 185 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 185 LEU VAL PRO ARG GLY SER HIS MET SER ASP VAL GLU SER SEQRES 3 B 185 LEU GLU ASN THR SER GLU ASN ARG ALA GLN VAL ALA ALA SEQRES 4 B 185 ARG GLN HIS ASN ARG LYS ILE VAL GLU GLN TYR MET HIS SEQRES 5 B 185 THR ARG GLY GLU ALA ARG LEU LYS ARG HIS LEU LEU PHE SEQRES 6 B 185 THR GLU ASP GLY VAL GLY GLY LEU TRP THR THR ASP SER SEQRES 7 B 185 GLY GLN PRO ILE ALA ILE ARG GLY ARG GLU LYS LEU GLY SEQRES 8 B 185 GLU HIS ALA VAL TRP SER LEU GLN CYS PHE PRO ASP TRP SEQRES 9 B 185 VAL TRP THR ASP ILE GLN ILE PHE GLU THR GLN ASP PRO SEQRES 10 B 185 ASN TRP PHE TRP VAL GLU CYS ARG GLY GLU GLY ALA ILE SEQRES 11 B 185 VAL PHE PRO GLY TYR PRO ARG GLY GLN TYR ARG ASN HIS SEQRES 12 B 185 PHE LEU HIS SER PHE ARG PHE GLU ASN GLY LEU ILE LYS SEQRES 13 B 185 GLU GLN ARG GLU PHE MET ASN PRO CYS GLU GLN PHE ARG SEQRES 14 B 185 SER LEU GLY ILE GLU VAL PRO GLU VAL ARG ARG ASP GLY SEQRES 15 B 185 LEU PRO SER HET AJD A 500 17 HET AKD A 600 34 HET AJD B 500 17 HET AKD B 600 34 HETNAM AJD 5-BROMO-2-[(3R)-PIPERIDIN-3-YLAMINO]BENZOIC ACID HETNAM AKD 5-BROMO-2-[(3S)-PIPERIDIN-3-YLAMINO]BENZOATE FORMUL 3 AJD 2(C12 H15 BR N2 O2) FORMUL 4 AKD 2(C12 H14 BR N2 O2 1-) FORMUL 7 HOH *231(H2 O) HELIX 1 1 THR A 10 THR A 33 1 24 HELIX 2 2 ARG A 34 LEU A 43 5 10 HELIX 3 3 GLY A 66 PHE A 81 1 16 HELIX 4 4 ASN A 143 LEU A 151 1 9 HELIX 5 5 THR B 10 HIS B 32 1 23 HELIX 6 6 ARG B 34 LEU B 43 5 10 HELIX 7 7 GLY B 66 PHE B 81 1 16 HELIX 8 8 ASN B 143 LEU B 151 1 9 SHEET 1 A 6 ILE A 62 ARG A 65 0 SHEET 2 A 6 PHE A 45 LEU A 53 -1 N GLY A 51 O ILE A 64 SHEET 3 A 6 LEU A 134 PHE A 141 1 O ILE A 135 N THR A 46 SHEET 4 A 6 GLY A 118 GLU A 131 -1 N LEU A 125 O PHE A 141 SHEET 5 A 6 TRP A 99 ILE A 110 -1 N GLY A 108 O TYR A 120 SHEET 6 A 6 VAL A 85 PHE A 92 -1 N PHE A 92 O TRP A 101 SHEET 1 B 6 ILE B 62 ARG B 65 0 SHEET 2 B 6 PHE B 45 LEU B 53 -1 N GLY B 51 O ILE B 64 SHEET 3 B 6 LEU B 134 MET B 142 1 O GLN B 138 N VAL B 50 SHEET 4 B 6 GLY B 118 GLU B 131 -1 N LEU B 125 O PHE B 141 SHEET 5 B 6 TRP B 99 ILE B 110 -1 N GLY B 108 O TYR B 120 SHEET 6 B 6 VAL B 85 PHE B 92 -1 N PHE B 92 O TRP B 101 SITE 1 AC1 13 ARG A 38 ARG A 41 LEU A 70 HIS A 73 SITE 2 AC1 13 ALA A 74 SER A 77 TRP A 84 GLU A 140 SITE 3 AC1 13 HOH A 203 HOH A 237 HOH A 272 HOH A 276 SITE 4 AC1 13 AKD A 600 SITE 1 AC2 13 GLY A 52 ILE A 62 HIS A 73 TRP A 76 SITE 2 AC2 13 CYS A 80 PHE A 81 TRP A 84 PHE A 112 SITE 3 AC2 13 GLU A 140 GLN A 147 HOH A 168 AJD A 500 SITE 4 AC2 13 ARG B 160 SITE 1 AC3 9 ARG B 38 ARG B 41 LEU B 70 HIS B 73 SITE 2 AC3 9 ALA B 74 SER B 77 TRP B 84 GLU B 140 SITE 3 AC3 9 AKD B 600 SITE 1 AC4 14 ARG A 160 ASP A 161 GLY B 52 ILE B 62 SITE 2 AC4 14 TRP B 76 CYS B 80 PHE B 81 TRP B 84 SITE 3 AC4 14 TRP B 86 PHE B 112 GLU B 140 GLN B 147 SITE 4 AC4 14 HOH B 177 AJD B 500 CRYST1 64.401 64.401 160.520 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015528 0.008965 0.000000 0.00000 SCALE2 0.000000 0.017930 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006230 0.00000