data_3JWP # _entry.id 3JWP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3JWP RCSB RCSB055254 WWPDB D_1000055254 # _pdbx_database_status.entry_id 3JWP _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-09-18 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wernimont, A.K.' 1 'Hutchinson, A.' 2 'Lin, Y.H.' 3 'MacKenzie, F.' 4 'Senisterra, G.' 5 'Allali-Hassanali, A.' 6 'Vedadi, M.' 7 'Ravichandran, M.' 8 'Cossar, D.' 9 'Kozieradzki, I.' 10 'Zhao, Y.' 11 'Schapira, M.' 12 'Arrowsmith, C.H.' 13 'Bountra, C.' 14 'Weigelt, J.' 15 'Edwards, A.M.' 16 'Hui, R.' 17 'Qiu, W.' 18 'Brand, V.' 19 'Structural Genomics Consortium (SGC)' 20 # _citation.id primary _citation.title 'Crystal structure of Plasmodium falciparum SIR2A (PF13_0152) in complex with AMP' _citation.journal_abbrev 'TO BE PUBLISHED' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Wernimont, A.K.' 1 primary 'Hutchinson, A.' 2 primary 'Lin, Y.H.' 3 primary 'MacKenzie, F.' 4 primary 'Senisterra, G.' 5 primary 'Allali-Hassanali, A.' 6 primary 'Vedadi, M.' 7 primary 'Ravichandran, M.' 8 primary 'Cossar, D.' 9 primary 'Kozieradzki, I.' 10 primary 'Zhao, Y.' 11 primary 'Schapira, M.' 12 primary 'Arrowsmith, C.H.' 13 primary 'Bountra, C.' 14 primary 'Weigelt, J.' 15 primary 'Edwards, A.M.' 16 primary 'Hui, R.' 17 primary 'Qiu, W.' 18 primary 'Brand, V.' 19 # _cell.entry_id 3JWP _cell.length_a 106.564 _cell.length_b 106.564 _cell.length_c 44.968 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3JWP _symmetry.space_group_name_H-M 'P 6' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 168 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Transcriptional regulatory protein sir2 homologue' 29623.744 1 ? ? ? ? 2 non-polymer syn 'ADENOSINE MONOPHOSPHATE' 347.221 1 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 4 non-polymer syn 'TRIETHYLENE GLYCOL' 150.173 1 ? ? ? ? 5 water nat water 18.015 3 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GKKDTQSITLEELAKIIKKCKHVVALTGSGTSAESNIPSFRGSSNSIWSKYDPRIYGTIWGFWKYPEKIWEVIRDISSDY EIEINNGHVALSTLESLGYLKSVVTQNVDGLHEASGNTKVISLHGNVFEAVCCTCNKIVKLNKI(MSE)LQKTSHF (MSE)HQLPPECPCGGIFKPNIILFGEVVSSDLLKEAEEEIAKCDLLLVIGTSSTVSTATNLCHFACKKKKKIVEINISK TYITNK(MSE)SDYHVCAKFSELTKVANILKGSSEKNKKI(MSE) ; _entity_poly.pdbx_seq_one_letter_code_can ;GKKDTQSITLEELAKIIKKCKHVVALTGSGTSAESNIPSFRGSSNSIWSKYDPRIYGTIWGFWKYPEKIWEVIRDISSDY EIEINNGHVALSTLESLGYLKSVVTQNVDGLHEASGNTKVISLHGNVFEAVCCTCNKIVKLNKIMLQKTSHFMHQLPPEC PCGGIFKPNIILFGEVVSSDLLKEAEEEIAKCDLLLVIGTSSTVSTATNLCHFACKKKKKIVEINISKTYITNKMSDYHV CAKFSELTKVANILKGSSEKNKKIM ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 LYS n 1 3 LYS n 1 4 ASP n 1 5 THR n 1 6 GLN n 1 7 SER n 1 8 ILE n 1 9 THR n 1 10 LEU n 1 11 GLU n 1 12 GLU n 1 13 LEU n 1 14 ALA n 1 15 LYS n 1 16 ILE n 1 17 ILE n 1 18 LYS n 1 19 LYS n 1 20 CYS n 1 21 LYS n 1 22 HIS n 1 23 VAL n 1 24 VAL n 1 25 ALA n 1 26 LEU n 1 27 THR n 1 28 GLY n 1 29 SER n 1 30 GLY n 1 31 THR n 1 32 SER n 1 33 ALA n 1 34 GLU n 1 35 SER n 1 36 ASN n 1 37 ILE n 1 38 PRO n 1 39 SER n 1 40 PHE n 1 41 ARG n 1 42 GLY n 1 43 SER n 1 44 SER n 1 45 ASN n 1 46 SER n 1 47 ILE n 1 48 TRP n 1 49 SER n 1 50 LYS n 1 51 TYR n 1 52 ASP n 1 53 PRO n 1 54 ARG n 1 55 ILE n 1 56 TYR n 1 57 GLY n 1 58 THR n 1 59 ILE n 1 60 TRP n 1 61 GLY n 1 62 PHE n 1 63 TRP n 1 64 LYS n 1 65 TYR n 1 66 PRO n 1 67 GLU n 1 68 LYS n 1 69 ILE n 1 70 TRP n 1 71 GLU n 1 72 VAL n 1 73 ILE n 1 74 ARG n 1 75 ASP n 1 76 ILE n 1 77 SER n 1 78 SER n 1 79 ASP n 1 80 TYR n 1 81 GLU n 1 82 ILE n 1 83 GLU n 1 84 ILE n 1 85 ASN n 1 86 ASN n 1 87 GLY n 1 88 HIS n 1 89 VAL n 1 90 ALA n 1 91 LEU n 1 92 SER n 1 93 THR n 1 94 LEU n 1 95 GLU n 1 96 SER n 1 97 LEU n 1 98 GLY n 1 99 TYR n 1 100 LEU n 1 101 LYS n 1 102 SER n 1 103 VAL n 1 104 VAL n 1 105 THR n 1 106 GLN n 1 107 ASN n 1 108 VAL n 1 109 ASP n 1 110 GLY n 1 111 LEU n 1 112 HIS n 1 113 GLU n 1 114 ALA n 1 115 SER n 1 116 GLY n 1 117 ASN n 1 118 THR n 1 119 LYS n 1 120 VAL n 1 121 ILE n 1 122 SER n 1 123 LEU n 1 124 HIS n 1 125 GLY n 1 126 ASN n 1 127 VAL n 1 128 PHE n 1 129 GLU n 1 130 ALA n 1 131 VAL n 1 132 CYS n 1 133 CYS n 1 134 THR n 1 135 CYS n 1 136 ASN n 1 137 LYS n 1 138 ILE n 1 139 VAL n 1 140 LYS n 1 141 LEU n 1 142 ASN n 1 143 LYS n 1 144 ILE n 1 145 MSE n 1 146 LEU n 1 147 GLN n 1 148 LYS n 1 149 THR n 1 150 SER n 1 151 HIS n 1 152 PHE n 1 153 MSE n 1 154 HIS n 1 155 GLN n 1 156 LEU n 1 157 PRO n 1 158 PRO n 1 159 GLU n 1 160 CYS n 1 161 PRO n 1 162 CYS n 1 163 GLY n 1 164 GLY n 1 165 ILE n 1 166 PHE n 1 167 LYS n 1 168 PRO n 1 169 ASN n 1 170 ILE n 1 171 ILE n 1 172 LEU n 1 173 PHE n 1 174 GLY n 1 175 GLU n 1 176 VAL n 1 177 VAL n 1 178 SER n 1 179 SER n 1 180 ASP n 1 181 LEU n 1 182 LEU n 1 183 LYS n 1 184 GLU n 1 185 ALA n 1 186 GLU n 1 187 GLU n 1 188 GLU n 1 189 ILE n 1 190 ALA n 1 191 LYS n 1 192 CYS n 1 193 ASP n 1 194 LEU n 1 195 LEU n 1 196 LEU n 1 197 VAL n 1 198 ILE n 1 199 GLY n 1 200 THR n 1 201 SER n 1 202 SER n 1 203 THR n 1 204 VAL n 1 205 SER n 1 206 THR n 1 207 ALA n 1 208 THR n 1 209 ASN n 1 210 LEU n 1 211 CYS n 1 212 HIS n 1 213 PHE n 1 214 ALA n 1 215 CYS n 1 216 LYS n 1 217 LYS n 1 218 LYS n 1 219 LYS n 1 220 LYS n 1 221 ILE n 1 222 VAL n 1 223 GLU n 1 224 ILE n 1 225 ASN n 1 226 ILE n 1 227 SER n 1 228 LYS n 1 229 THR n 1 230 TYR n 1 231 ILE n 1 232 THR n 1 233 ASN n 1 234 LYS n 1 235 MSE n 1 236 SER n 1 237 ASP n 1 238 TYR n 1 239 HIS n 1 240 VAL n 1 241 CYS n 1 242 ALA n 1 243 LYS n 1 244 PHE n 1 245 SER n 1 246 GLU n 1 247 LEU n 1 248 THR n 1 249 LYS n 1 250 VAL n 1 251 ALA n 1 252 ASN n 1 253 ILE n 1 254 LEU n 1 255 LYS n 1 256 GLY n 1 257 SER n 1 258 SER n 1 259 GLU n 1 260 LYS n 1 261 ASN n 1 262 LYS n 1 263 LYS n 1 264 ILE n 1 265 MSE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'PF13_0152, Sir2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Plasmodium falciparum' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 36329 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain Pet15 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pet15MLH _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8IE47_PLAF7 _struct_ref.pdbx_db_accession Q8IE47 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KKDTQSITLEELAKIIKKCKHVVALTGSGTSAESNIPSFRGSSNSIWSKYDPRIYGTIWGFWKYPEKIWEVIRDISSDYE IEINNGHVALSTLESLGYLKSVVTQNVDGLHEASGNTKVISLHGNVFEAVCCTCNKIVKLNKIMLQKTSHFMHQLPPECP CGGIFKPNIILFGEVVSSDLLKEAEEEIAKCDLLLVIGTSSTVSTATNLCHFACKKKKKIVEINISKTYITNKMSDYHVC AKFSELTKVANILKGSSEKNKKIM ; _struct_ref.pdbx_align_begin 10 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3JWP _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 265 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8IE47 _struct_ref_seq.db_align_beg 10 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 273 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 265 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3JWP _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q8IE47 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'EXPRESSION TAG' _struct_ref_seq_dif.pdbx_auth_seq_num 1 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 AMP non-polymer . 'ADENOSINE MONOPHOSPHATE' ? 'C10 H14 N5 O7 P' 347.221 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PGE non-polymer . 'TRIETHYLENE GLYCOL' ? 'C6 H14 O4' 150.173 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.crystals_number 2 _exptl.entry_id 3JWP _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.49 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 50.56 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '17 % PEG 3350, 0.1 M NaCitrate pH 5.7, 0.1 mM beta-OG, 2.6 mM AMP, 2.6 mM peptide(SGRGKacGGKacGLGKacGGAKacRHR)' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 100 ? 1 1,2 ? ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 CCD 'ADSC QUANTUM 210' 2009-05-01 ? 2 CCD 'ADSC QUANTUM 210' 2009-05-01 ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.monochromator _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.pdbx_scattering_type 1 1 'SINGLE WAVELENGTH' ? M x-ray 2 1 'SINGLE WAVELENGTH' ? M x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength .978 _diffrn_radiation_wavelength.wt 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline 1 SYNCHROTRON 'CHESS BEAMLINE A1' ? .978 CHESS A1 2 SYNCHROTRON 'CHESS BEAMLINE A1' ? .978 CHESS A1 # _reflns.entry_id 3JWP _reflns.d_resolution_high 2.65 _reflns.d_resolution_low 50.000 _reflns.number_obs 10243 _reflns.pdbx_Rmerge_I_obs 0.094 _reflns.pdbx_netI_over_sigmaI 8.900 _reflns.pdbx_chi_squared 1.932 _reflns.pdbx_redundancy 7.600 _reflns.percent_possible_obs 99.800 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.number_all 10263 _reflns.pdbx_Rsym_value .078 _reflns.B_iso_Wilson_estimate 81.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1,2 # _reflns_shell.d_res_high 2.65 _reflns_shell.d_res_low 2.70 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs .936 _reflns_shell.meanI_over_sigI_obs 2.05 _reflns_shell.pdbx_Rsym_value .914 _reflns_shell.pdbx_chi_squared 1.283 _reflns_shell.pdbx_redundancy 6.6 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 410 _reflns_shell.percent_possible_all 100 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1,2 # _refine.entry_id 3JWP _refine.ls_d_res_high 2.650 _refine.ls_d_res_low 34.880 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.050 _refine.ls_number_reflns_obs 8584 _refine.ls_number_reflns_all 8666 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : RESIDUAL ONLY' _refine.ls_R_factor_all .209 _refine.ls_R_factor_obs 0.209 _refine.ls_R_factor_R_work 0.206 _refine.ls_wR_factor_R_work 0.197 _refine.ls_R_factor_R_free 0.274 _refine.ls_wR_factor_R_free 0.262 _refine.ls_percent_reflns_R_free 4.700 _refine.ls_number_reflns_R_free 406 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 33.138 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.130 _refine.aniso_B[2][2] 0.130 _refine.aniso_B[3][3] -0.200 _refine.aniso_B[1][2] 0.070 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.954 _refine.correlation_coeff_Fo_to_Fc_free 0.928 _refine.overall_SU_R_Cruickshank_DPI 1.115 _refine.overall_SU_R_free 0.360 _refine.pdbx_overall_ESU_R 1.115 _refine.pdbx_overall_ESU_R_Free 0.360 _refine.overall_SU_ML 0.294 _refine.overall_SU_B 28.570 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.790 _refine.B_iso_max 74.27 _refine.B_iso_min 9.72 _refine.occupancy_max 1.00 _refine.occupancy_min 1.00 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1888 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 34 _refine_hist.number_atoms_solvent 3 _refine_hist.number_atoms_total 1925 _refine_hist.d_res_high 2.650 _refine_hist.d_res_low 34.880 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1958 0.007 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1222 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2670 1.103 1.966 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 3010 0.814 3.001 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 254 5.389 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 69 39.069 25.652 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 306 16.001 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 2 25.986 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 324 0.057 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 2164 0.004 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 361 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1266 0.285 1.500 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 517 0.041 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2038 0.538 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 692 0.798 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 632 1.304 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.650 _refine_ls_shell.d_res_low 2.719 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 97.770 _refine_ls_shell.number_reflns_R_work 582 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.290 _refine_ls_shell.R_factor_R_free 0.325 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 33 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 615 _refine_ls_shell.number_reflns_obs 582 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3JWP _struct.title 'Crystal structure of Plasmodium falciparum SIR2A (PF13_0152) in complex with AMP' _struct.pdbx_descriptor 'Transcriptional regulatory protein sir2 homologue' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3JWP _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text 'malaria, transcription regulation, structural genomics, Structural Genomics Consortium, SGC, TRANSCRIPTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 9 ? CYS A 20 ? THR A 9 CYS A 20 1 ? 12 HELX_P HELX_P2 2 SER A 29 ? ASN A 36 ? SER A 29 ASN A 36 5 ? 8 HELX_P HELX_P3 3 SER A 46 ? LYS A 50 ? SER A 46 LYS A 50 5 ? 5 HELX_P HELX_P4 4 ASP A 52 ? GLY A 57 ? ASP A 52 GLY A 57 1 ? 6 HELX_P HELX_P5 5 THR A 58 ? TYR A 65 ? THR A 58 TYR A 65 1 ? 8 HELX_P HELX_P6 6 GLU A 67 ? TYR A 80 ? GLU A 67 TYR A 80 1 ? 14 HELX_P HELX_P7 7 ASN A 85 ? LEU A 97 ? ASN A 85 LEU A 97 1 ? 13 HELX_P HELX_P8 8 GLY A 110 ? GLY A 116 ? GLY A 110 GLY A 116 1 ? 7 HELX_P HELX_P9 9 ASN A 142 ? GLN A 147 ? ASN A 142 GLN A 147 1 ? 6 HELX_P HELX_P10 10 SER A 178 ? LYS A 191 ? SER A 178 LYS A 191 1 ? 14 HELX_P HELX_P11 11 SER A 205 ? LYS A 217 ? SER A 205 LYS A 217 1 ? 13 HELX_P HELX_P12 12 LYS A 243 ? GLU A 246 ? LYS A 243 GLU A 246 5 ? 4 HELX_P HELX_P13 13 LEU A 247 ? GLY A 256 ? LEU A 247 GLY A 256 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ILE 144 C ? ? ? 1_555 A MSE 145 N ? ? A ILE 144 A MSE 145 1_555 ? ? ? ? ? ? ? 1.327 ? covale2 covale ? ? A MSE 145 C ? ? ? 1_555 A LEU 146 N ? ? A MSE 145 A LEU 146 1_555 ? ? ? ? ? ? ? 1.332 ? covale3 covale ? ? A PHE 152 C ? ? ? 1_555 A MSE 153 N ? ? A PHE 152 A MSE 153 1_555 ? ? ? ? ? ? ? 1.334 ? covale4 covale ? ? A MSE 153 C ? ? ? 1_555 A HIS 154 N ? ? A MSE 153 A HIS 154 1_555 ? ? ? ? ? ? ? 1.329 ? covale5 covale ? ? A LYS 234 C ? ? ? 1_555 A MSE 235 N ? ? A LYS 234 A MSE 235 1_555 ? ? ? ? ? ? ? 1.338 ? covale6 covale ? ? A MSE 235 C ? ? ? 1_555 A SER 236 N ? ? A MSE 235 A SER 236 1_555 ? ? ? ? ? ? ? 1.332 ? metalc1 metalc ? ? A CYS 132 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 132 A ZN 2001 1_555 ? ? ? ? ? ? ? 2.386 ? metalc2 metalc ? ? A CYS 135 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 135 A ZN 2001 1_555 ? ? ? ? ? ? ? 2.278 ? metalc3 metalc ? ? A CYS 160 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 160 A ZN 2001 1_555 ? ? ? ? ? ? ? 2.335 ? metalc4 metalc ? ? A CYS 162 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 162 A ZN 2001 1_555 ? ? ? ? ? ? ? 2.307 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LEU _struct_mon_prot_cis.label_seq_id 156 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LEU _struct_mon_prot_cis.auth_seq_id 156 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 157 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 157 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -2.41 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 6 ? ILE A 8 ? GLN A 6 ILE A 8 A 2 TYR A 238 ? CYS A 241 ? TYR A 238 CYS A 241 A 3 ILE A 221 ? ASN A 225 ? ILE A 221 ASN A 225 A 4 LEU A 194 ? ILE A 198 ? LEU A 194 ILE A 198 A 5 VAL A 23 ? THR A 27 ? VAL A 23 THR A 27 A 6 LEU A 100 ? THR A 105 ? LEU A 100 THR A 105 A 7 VAL A 120 ? SER A 122 ? VAL A 120 SER A 122 B 1 ILE A 138 ? LYS A 140 ? ILE A 138 LYS A 140 B 2 GLY A 125 ? CYS A 132 ? GLY A 125 CYS A 132 B 3 PHE A 166 ? ILE A 170 ? PHE A 166 ILE A 170 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 8 ? N ILE A 8 O HIS A 239 ? O HIS A 239 A 2 3 O VAL A 240 ? O VAL A 240 N GLU A 223 ? N GLU A 223 A 3 4 O VAL A 222 ? O VAL A 222 N LEU A 195 ? N LEU A 195 A 4 5 O LEU A 196 ? O LEU A 196 N LEU A 26 ? N LEU A 26 A 5 6 N VAL A 23 ? N VAL A 23 O LYS A 101 ? O LYS A 101 A 6 7 N THR A 105 ? N THR A 105 O ILE A 121 ? O ILE A 121 B 1 2 O VAL A 139 ? O VAL A 139 N ALA A 130 ? N ALA A 130 B 2 3 N GLU A 129 ? N GLU A 129 O ASN A 169 ? O ASN A 169 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 12 'BINDING SITE FOR RESIDUE AMP A 266' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A 2001' AC3 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE PGE A 267' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 SER A 29 ? SER A 29 . ? 1_555 ? 2 AC1 12 GLY A 30 ? GLY A 30 . ? 1_555 ? 3 AC1 12 GLU A 34 ? GLU A 34 . ? 1_555 ? 4 AC1 12 ARG A 41 ? ARG A 41 . ? 1_555 ? 5 AC1 12 GLY A 199 ? GLY A 199 . ? 1_555 ? 6 AC1 12 THR A 200 ? THR A 200 . ? 1_555 ? 7 AC1 12 SER A 202 ? SER A 202 . ? 1_555 ? 8 AC1 12 ASN A 225 ? ASN A 225 . ? 1_555 ? 9 AC1 12 ILE A 226 ? ILE A 226 . ? 1_555 ? 10 AC1 12 SER A 227 ? SER A 227 . ? 1_555 ? 11 AC1 12 LYS A 243 ? LYS A 243 . ? 1_555 ? 12 AC1 12 PHE A 244 ? PHE A 244 . ? 1_555 ? 13 AC2 4 CYS A 132 ? CYS A 132 . ? 1_555 ? 14 AC2 4 CYS A 135 ? CYS A 135 . ? 1_555 ? 15 AC2 4 CYS A 160 ? CYS A 160 . ? 1_555 ? 16 AC2 4 CYS A 162 ? CYS A 162 . ? 1_555 ? 17 AC3 2 PHE A 40 ? PHE A 40 . ? 1_555 ? 18 AC3 2 ILE A 171 ? ILE A 171 . ? 1_555 ? # _atom_sites.entry_id 3JWP _atom_sites.fract_transf_matrix[1][1] 0.009384 _atom_sites.fract_transf_matrix[1][2] 0.005418 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010836 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022238 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S SE ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 ? ? ? A . n A 1 2 LYS 2 2 2 LYS LYS A . n A 1 3 LYS 3 3 3 LYS LYS A . n A 1 4 ASP 4 4 4 ASP ASP A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 GLN 6 6 6 GLN GLN A . n A 1 7 SER 7 7 7 SER SER A . n A 1 8 ILE 8 8 8 ILE ILE A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 GLU 12 12 12 GLU GLU A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 ILE 16 16 16 ILE ILE A . n A 1 17 ILE 17 17 17 ILE ILE A . n A 1 18 LYS 18 18 18 LYS LYS A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 CYS 20 20 20 CYS CYS A . n A 1 21 LYS 21 21 21 LYS LYS A . n A 1 22 HIS 22 22 22 HIS HIS A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 VAL 24 24 24 VAL VAL A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 THR 27 27 27 THR THR A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 ASN 36 36 36 ASN ASN A . n A 1 37 ILE 37 37 37 ILE ILE A . n A 1 38 PRO 38 38 38 PRO PRO A . n A 1 39 SER 39 39 39 SER SER A . n A 1 40 PHE 40 40 40 PHE PHE A . n A 1 41 ARG 41 41 41 ARG ARG A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 SER 43 43 43 SER SER A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 ASN 45 45 45 ASN ASN A . n A 1 46 SER 46 46 46 SER SER A . n A 1 47 ILE 47 47 47 ILE ILE A . n A 1 48 TRP 48 48 48 TRP TRP A . n A 1 49 SER 49 49 49 SER SER A . n A 1 50 LYS 50 50 50 LYS LYS A . n A 1 51 TYR 51 51 51 TYR TYR A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 PRO 53 53 53 PRO PRO A . n A 1 54 ARG 54 54 54 ARG ARG A . n A 1 55 ILE 55 55 55 ILE ILE A . n A 1 56 TYR 56 56 56 TYR TYR A . n A 1 57 GLY 57 57 57 GLY GLY A . n A 1 58 THR 58 58 58 THR THR A . n A 1 59 ILE 59 59 59 ILE ILE A . n A 1 60 TRP 60 60 60 TRP TRP A . n A 1 61 GLY 61 61 61 GLY GLY A . n A 1 62 PHE 62 62 62 PHE PHE A . n A 1 63 TRP 63 63 63 TRP TRP A . n A 1 64 LYS 64 64 64 LYS LYS A . n A 1 65 TYR 65 65 65 TYR TYR A . n A 1 66 PRO 66 66 66 PRO PRO A . n A 1 67 GLU 67 67 67 GLU GLU A . n A 1 68 LYS 68 68 68 LYS LYS A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 TRP 70 70 70 TRP TRP A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 ILE 73 73 73 ILE ILE A . n A 1 74 ARG 74 74 74 ARG ARG A . n A 1 75 ASP 75 75 75 ASP ASP A . n A 1 76 ILE 76 76 76 ILE ILE A . n A 1 77 SER 77 77 77 SER SER A . n A 1 78 SER 78 78 78 SER SER A . n A 1 79 ASP 79 79 79 ASP ASP A . n A 1 80 TYR 80 80 80 TYR TYR A . n A 1 81 GLU 81 81 81 GLU GLU A . n A 1 82 ILE 82 82 82 ILE ILE A . n A 1 83 GLU 83 83 83 GLU GLU A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 ASN 85 85 85 ASN ASN A . n A 1 86 ASN 86 86 86 ASN ASN A . n A 1 87 GLY 87 87 87 GLY GLY A . n A 1 88 HIS 88 88 88 HIS HIS A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 ALA 90 90 90 ALA ALA A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 SER 92 92 92 SER SER A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 LEU 94 94 94 LEU LEU A . n A 1 95 GLU 95 95 95 GLU GLU A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 GLY 98 98 98 GLY GLY A . n A 1 99 TYR 99 99 99 TYR TYR A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 LYS 101 101 101 LYS LYS A . n A 1 102 SER 102 102 102 SER SER A . n A 1 103 VAL 103 103 103 VAL VAL A . n A 1 104 VAL 104 104 104 VAL VAL A . n A 1 105 THR 105 105 105 THR THR A . n A 1 106 GLN 106 106 106 GLN GLN A . n A 1 107 ASN 107 107 107 ASN ASN A . n A 1 108 VAL 108 108 108 VAL VAL A . n A 1 109 ASP 109 109 109 ASP ASP A . n A 1 110 GLY 110 110 110 GLY GLY A . n A 1 111 LEU 111 111 111 LEU LEU A . n A 1 112 HIS 112 112 112 HIS HIS A . n A 1 113 GLU 113 113 113 GLU GLU A . n A 1 114 ALA 114 114 114 ALA ALA A . n A 1 115 SER 115 115 115 SER SER A . n A 1 116 GLY 116 116 116 GLY GLY A . n A 1 117 ASN 117 117 117 ASN ASN A . n A 1 118 THR 118 118 118 THR THR A . n A 1 119 LYS 119 119 119 LYS LYS A . n A 1 120 VAL 120 120 120 VAL VAL A . n A 1 121 ILE 121 121 121 ILE ILE A . n A 1 122 SER 122 122 122 SER SER A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 HIS 124 124 124 HIS HIS A . n A 1 125 GLY 125 125 125 GLY GLY A . n A 1 126 ASN 126 126 126 ASN ASN A . n A 1 127 VAL 127 127 127 VAL VAL A . n A 1 128 PHE 128 128 128 PHE PHE A . n A 1 129 GLU 129 129 129 GLU GLU A . n A 1 130 ALA 130 130 130 ALA ALA A . n A 1 131 VAL 131 131 131 VAL VAL A . n A 1 132 CYS 132 132 132 CYS CYS A . n A 1 133 CYS 133 133 133 CYS CYS A . n A 1 134 THR 134 134 134 THR THR A . n A 1 135 CYS 135 135 135 CYS CYS A . n A 1 136 ASN 136 136 136 ASN ASN A . n A 1 137 LYS 137 137 137 LYS LYS A . n A 1 138 ILE 138 138 138 ILE ILE A . n A 1 139 VAL 139 139 139 VAL VAL A . n A 1 140 LYS 140 140 140 LYS LYS A . n A 1 141 LEU 141 141 141 LEU LEU A . n A 1 142 ASN 142 142 142 ASN ASN A . n A 1 143 LYS 143 143 143 LYS LYS A . n A 1 144 ILE 144 144 144 ILE ILE A . n A 1 145 MSE 145 145 145 MSE MSE A . n A 1 146 LEU 146 146 146 LEU LEU A . n A 1 147 GLN 147 147 147 GLN GLN A . n A 1 148 LYS 148 148 148 LYS LYS A . n A 1 149 THR 149 149 149 THR THR A . n A 1 150 SER 150 150 150 SER SER A . n A 1 151 HIS 151 151 151 HIS HIS A . n A 1 152 PHE 152 152 152 PHE PHE A . n A 1 153 MSE 153 153 153 MSE MSE A . n A 1 154 HIS 154 154 154 HIS HIS A . n A 1 155 GLN 155 155 155 GLN GLN A . n A 1 156 LEU 156 156 156 LEU LEU A . n A 1 157 PRO 157 157 157 PRO PRO A . n A 1 158 PRO 158 158 158 PRO PRO A . n A 1 159 GLU 159 159 159 GLU GLU A . n A 1 160 CYS 160 160 160 CYS CYS A . n A 1 161 PRO 161 161 161 PRO PRO A . n A 1 162 CYS 162 162 162 CYS CYS A . n A 1 163 GLY 163 163 163 GLY GLY A . n A 1 164 GLY 164 164 164 GLY GLY A . n A 1 165 ILE 165 165 165 ILE ILE A . n A 1 166 PHE 166 166 166 PHE PHE A . n A 1 167 LYS 167 167 167 LYS LYS A . n A 1 168 PRO 168 168 168 PRO PRO A . n A 1 169 ASN 169 169 169 ASN ASN A . n A 1 170 ILE 170 170 170 ILE ILE A . n A 1 171 ILE 171 171 171 ILE ILE A . n A 1 172 LEU 172 172 172 LEU LEU A . n A 1 173 PHE 173 173 173 PHE PHE A . n A 1 174 GLY 174 174 174 GLY GLY A . n A 1 175 GLU 175 175 175 GLU GLU A . n A 1 176 VAL 176 176 176 VAL VAL A . n A 1 177 VAL 177 177 177 VAL VAL A . n A 1 178 SER 178 178 178 SER SER A . n A 1 179 SER 179 179 179 SER SER A . n A 1 180 ASP 180 180 180 ASP ASP A . n A 1 181 LEU 181 181 181 LEU LEU A . n A 1 182 LEU 182 182 182 LEU LEU A . n A 1 183 LYS 183 183 183 LYS LYS A . n A 1 184 GLU 184 184 184 GLU GLU A . n A 1 185 ALA 185 185 185 ALA ALA A . n A 1 186 GLU 186 186 186 GLU GLU A . n A 1 187 GLU 187 187 187 GLU GLU A . n A 1 188 GLU 188 188 188 GLU GLU A . n A 1 189 ILE 189 189 189 ILE ILE A . n A 1 190 ALA 190 190 190 ALA ALA A . n A 1 191 LYS 191 191 191 LYS LYS A . n A 1 192 CYS 192 192 192 CYS CYS A . n A 1 193 ASP 193 193 193 ASP ASP A . n A 1 194 LEU 194 194 194 LEU LEU A . n A 1 195 LEU 195 195 195 LEU LEU A . n A 1 196 LEU 196 196 196 LEU LEU A . n A 1 197 VAL 197 197 197 VAL VAL A . n A 1 198 ILE 198 198 198 ILE ILE A . n A 1 199 GLY 199 199 199 GLY GLY A . n A 1 200 THR 200 200 200 THR THR A . n A 1 201 SER 201 201 201 SER SER A . n A 1 202 SER 202 202 202 SER SER A . n A 1 203 THR 203 203 203 THR THR A . n A 1 204 VAL 204 204 204 VAL VAL A . n A 1 205 SER 205 205 205 SER SER A . n A 1 206 THR 206 206 206 THR THR A . n A 1 207 ALA 207 207 207 ALA ALA A . n A 1 208 THR 208 208 208 THR THR A . n A 1 209 ASN 209 209 209 ASN ASN A . n A 1 210 LEU 210 210 210 LEU LEU A . n A 1 211 CYS 211 211 211 CYS CYS A . n A 1 212 HIS 212 212 212 HIS HIS A . n A 1 213 PHE 213 213 213 PHE PHE A . n A 1 214 ALA 214 214 214 ALA ALA A . n A 1 215 CYS 215 215 215 CYS CYS A . n A 1 216 LYS 216 216 216 LYS LYS A . n A 1 217 LYS 217 217 217 LYS LYS A . n A 1 218 LYS 218 218 218 LYS LYS A . n A 1 219 LYS 219 219 219 LYS LYS A . n A 1 220 LYS 220 220 220 LYS LYS A . n A 1 221 ILE 221 221 221 ILE ILE A . n A 1 222 VAL 222 222 222 VAL VAL A . n A 1 223 GLU 223 223 223 GLU GLU A . n A 1 224 ILE 224 224 224 ILE ILE A . n A 1 225 ASN 225 225 225 ASN ASN A . n A 1 226 ILE 226 226 226 ILE ILE A . n A 1 227 SER 227 227 227 SER SER A . n A 1 228 LYS 228 228 228 LYS LYS A . n A 1 229 THR 229 229 229 THR THR A . n A 1 230 TYR 230 230 230 TYR TYR A . n A 1 231 ILE 231 231 231 ILE ILE A . n A 1 232 THR 232 232 232 THR THR A . n A 1 233 ASN 233 233 233 ASN ASN A . n A 1 234 LYS 234 234 234 LYS LYS A . n A 1 235 MSE 235 235 235 MSE MSE A . n A 1 236 SER 236 236 236 SER SER A . n A 1 237 ASP 237 237 237 ASP ASP A . n A 1 238 TYR 238 238 238 TYR TYR A . n A 1 239 HIS 239 239 239 HIS HIS A . n A 1 240 VAL 240 240 240 VAL VAL A . n A 1 241 CYS 241 241 241 CYS CYS A . n A 1 242 ALA 242 242 242 ALA ALA A . n A 1 243 LYS 243 243 243 LYS LYS A . n A 1 244 PHE 244 244 244 PHE PHE A . n A 1 245 SER 245 245 245 SER SER A . n A 1 246 GLU 246 246 246 GLU GLU A . n A 1 247 LEU 247 247 247 LEU LEU A . n A 1 248 THR 248 248 248 THR THR A . n A 1 249 LYS 249 249 249 LYS LYS A . n A 1 250 VAL 250 250 250 VAL VAL A . n A 1 251 ALA 251 251 251 ALA ALA A . n A 1 252 ASN 252 252 252 ASN ASN A . n A 1 253 ILE 253 253 253 ILE ILE A . n A 1 254 LEU 254 254 254 LEU LEU A . n A 1 255 LYS 255 255 255 LYS LYS A . n A 1 256 GLY 256 256 256 GLY GLY A . n A 1 257 SER 257 257 ? ? ? A . n A 1 258 SER 258 258 ? ? ? A . n A 1 259 GLU 259 259 ? ? ? A . n A 1 260 LYS 260 260 ? ? ? A . n A 1 261 ASN 261 261 ? ? ? A . n A 1 262 LYS 262 262 ? ? ? A . n A 1 263 LYS 263 263 ? ? ? A . n A 1 264 ILE 264 264 ? ? ? A . n A 1 265 MSE 265 265 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AMP 1 266 266 AMP AMP A . C 3 ZN 1 2001 2001 ZN ZN A . D 4 PGE 1 267 267 PGE PGE A . E 5 HOH 1 268 268 HOH HOH A . E 5 HOH 2 269 269 HOH HOH A . E 5 HOH 3 270 270 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 145 A MSE 145 ? MET SELENOMETHIONINE 2 A MSE 153 A MSE 153 ? MET SELENOMETHIONINE 3 A MSE 235 A MSE 235 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 8410 ? 1 MORE -55 ? 1 'SSA (A^2)' 29600 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_565 -y,x-y+1,z -0.5000000000 -0.8660254038 0.0000000000 -53.2820000000 0.8660254038 -0.5000000000 0.0000000000 92.2871311289 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_455 -x+y-1,-x,z -0.5000000000 0.8660254038 0.0000000000 -106.5640000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 132 ? A CYS 132 ? 1_555 ZN ? C ZN . ? A ZN 2001 ? 1_555 SG ? A CYS 135 ? A CYS 135 ? 1_555 112.3 ? 2 SG ? A CYS 132 ? A CYS 132 ? 1_555 ZN ? C ZN . ? A ZN 2001 ? 1_555 SG ? A CYS 160 ? A CYS 160 ? 1_555 104.5 ? 3 SG ? A CYS 135 ? A CYS 135 ? 1_555 ZN ? C ZN . ? A ZN 2001 ? 1_555 SG ? A CYS 160 ? A CYS 160 ? 1_555 105.9 ? 4 SG ? A CYS 132 ? A CYS 132 ? 1_555 ZN ? C ZN . ? A ZN 2001 ? 1_555 SG ? A CYS 162 ? A CYS 162 ? 1_555 99.2 ? 5 SG ? A CYS 135 ? A CYS 135 ? 1_555 ZN ? C ZN . ? A ZN 2001 ? 1_555 SG ? A CYS 162 ? A CYS 162 ? 1_555 120.6 ? 6 SG ? A CYS 160 ? A CYS 160 ? 1_555 ZN ? C ZN . ? A ZN 2001 ? 1_555 SG ? A CYS 162 ? A CYS 162 ? 1_555 113.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-10-20 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 2.630 _diffrn_reflns.pdbx_d_res_low 50.000 _diffrn_reflns.pdbx_number_obs 8831 _diffrn_reflns.pdbx_Rmerge_I_obs 0.064 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 1.39 _diffrn_reflns.av_sigmaI_over_netI 32.77 _diffrn_reflns.pdbx_redundancy 14.90 _diffrn_reflns.pdbx_percent_possible_obs 99.50 _diffrn_reflns.number 131157 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 7.13 50.00 ? ? 0.048 ? 1.370 14.70 99.20 1 5.66 7.13 ? ? 0.056 ? 1.742 15.60 100.00 1 4.95 5.66 ? ? 0.056 ? 1.419 15.90 100.00 1 4.50 4.95 ? ? 0.054 ? 1.550 16.00 100.00 1 4.17 4.50 ? ? 0.053 ? 2.166 16.00 100.00 1 3.93 4.17 ? ? 0.058 ? 2.360 16.20 100.00 1 3.73 3.93 ? ? 0.066 ? 2.041 16.10 100.00 1 3.57 3.73 ? ? 0.080 ? 1.682 16.20 100.00 1 3.43 3.57 ? ? 0.087 ? 1.538 16.30 100.00 1 3.31 3.43 ? ? 0.109 ? 1.246 16.10 100.00 1 3.21 3.31 ? ? 0.137 ? 1.194 16.10 100.00 1 3.12 3.21 ? ? 0.168 ? 1.167 16.30 100.00 1 3.04 3.12 ? ? 0.229 ? 1.028 16.20 100.00 1 2.96 3.04 ? ? 0.287 ? 1.023 16.30 100.00 1 2.89 2.96 ? ? 0.447 ? 0.978 15.90 100.00 1 2.83 2.89 ? ? 0.525 ? 0.919 14.10 100.00 1 2.78 2.83 ? ? 0.589 ? 0.913 13.30 100.00 1 2.72 2.78 ? ? 0.741 ? 0.867 12.00 100.00 1 2.68 2.72 ? ? ? ? 0.843 9.90 99.80 1 2.63 2.68 ? ? ? ? 0.861 7.10 92.00 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -35.7140 9.5490 -27.4797 0.3820 0.1997 0.4113 0.0641 0.1151 -0.0431 5.1401 4.9507 5.2181 -1.2886 -0.2505 1.6356 0.0717 -0.1060 0.0343 0.3141 -0.7747 -0.4740 -0.5002 0.5399 0.2964 'X-RAY DIFFRACTION' 2 ? refined -41.0729 27.4003 -2.9355 0.2022 0.4877 0.1942 -0.1056 0.0286 -0.0110 7.2913 8.0622 2.9663 1.3145 0.8892 0.6072 0.5843 -0.5975 0.0132 -1.0524 -0.2055 0.2241 0.2846 0.0784 -0.0472 'X-RAY DIFFRACTION' 3 ? refined -26.1583 19.2492 -13.6769 0.4979 0.5060 0.6842 -0.1535 0.1150 0.1150 3.6555 8.5221 8.5793 -2.1810 1.7933 10.3225 0.1096 0.7843 -0.8939 -0.4142 -0.2133 -1.1594 0.2480 0.0557 1.2490 'X-RAY DIFFRACTION' 4 ? refined -31.4506 24.6831 -20.5978 0.2317 0.2151 0.3664 -0.0488 0.0831 0.0733 5.2706 5.8225 7.9474 -1.6834 0.5059 2.2399 -0.2339 0.3000 -0.0662 0.0630 -0.0886 -0.8524 -0.2023 -0.0274 0.1754 'X-RAY DIFFRACTION' 5 ? refined -31.5057 38.5751 -6.6726 0.2431 0.4287 0.2671 -0.0539 0.0148 -0.0238 5.1488 4.2301 0.6959 2.3477 0.4348 0.0515 0.2743 -0.5077 0.2334 -0.2127 -0.2887 -0.1446 0.1426 0.1301 0.0640 'X-RAY DIFFRACTION' 6 ? refined -43.0261 21.4643 -27.5639 0.2883 0.2344 0.1984 -0.0114 0.0979 0.0606 5.4909 4.6958 5.4067 -0.1383 1.6489 0.0173 0.0224 0.0473 -0.0698 0.3530 -0.0110 -0.2605 -0.4602 -0.2804 -0.3713 'X-RAY DIFFRACTION' 7 ? refined -36.7990 7.6769 -23.8438 0.5240 0.1695 0.4648 -0.0464 0.0552 -0.0425 6.8091 5.2720 6.0772 -0.5810 0.7184 -1.0439 -0.1231 0.1701 -0.0470 -0.2012 -1.0037 -0.1573 -0.4602 0.8088 -0.0430 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 3 A 34 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 A 35 A 72 ? . . . . ? 'X-RAY DIFFRACTION' 3 3 A 73 A 97 ? . . . . ? 'X-RAY DIFFRACTION' 4 4 A 98 A 128 ? . . . . ? 'X-RAY DIFFRACTION' 5 5 A 129 A 174 ? . . . . ? 'X-RAY DIFFRACTION' 6 6 A 175 A 222 ? . . . . ? 'X-RAY DIFFRACTION' 7 7 A 223 A 258 ? . . . . ? # _phasing.method SAD # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 4 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 5 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 Adxv . ? ? ? ? 'data processing' ? ? ? 7 SHELXD . ? ? ? ? phasing ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 22 ? ? -153.07 73.49 2 1 ARG A 41 ? ? -121.17 -138.29 3 1 SER A 44 ? ? 81.32 -40.52 4 1 THR A 200 ? ? -163.11 -161.24 5 1 SER A 205 ? ? -170.43 -178.68 6 1 LYS A 234 ? ? -145.21 -53.52 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 2 ? NZ ? A LYS 2 NZ 2 1 Y 1 A LYS 15 ? CD ? A LYS 15 CD 3 1 Y 1 A LYS 15 ? CE ? A LYS 15 CE 4 1 Y 1 A LYS 15 ? NZ ? A LYS 15 NZ 5 1 Y 1 A LYS 18 ? CD ? A LYS 18 CD 6 1 Y 1 A LYS 18 ? CE ? A LYS 18 CE 7 1 Y 1 A LYS 18 ? NZ ? A LYS 18 NZ 8 1 Y 1 A LYS 19 ? CG ? A LYS 19 CG 9 1 Y 1 A LYS 19 ? CD ? A LYS 19 CD 10 1 Y 1 A LYS 19 ? CE ? A LYS 19 CE 11 1 Y 1 A LYS 19 ? NZ ? A LYS 19 NZ 12 1 Y 1 A LYS 21 ? CG ? A LYS 21 CG 13 1 Y 1 A LYS 21 ? CD ? A LYS 21 CD 14 1 Y 1 A LYS 21 ? CE ? A LYS 21 CE 15 1 Y 1 A LYS 21 ? NZ ? A LYS 21 NZ 16 1 Y 1 A SER 43 ? OG ? A SER 43 OG 17 1 Y 1 A SER 44 ? OG ? A SER 44 OG 18 1 Y 1 A ARG 54 ? CD ? A ARG 54 CD 19 1 Y 1 A ARG 54 ? NE ? A ARG 54 NE 20 1 Y 1 A ARG 54 ? CZ ? A ARG 54 CZ 21 1 Y 1 A ARG 54 ? NH1 ? A ARG 54 NH1 22 1 Y 1 A ARG 54 ? NH2 ? A ARG 54 NH2 23 1 Y 1 A ILE 55 ? CG1 ? A ILE 55 CG1 24 1 Y 1 A ILE 55 ? CG2 ? A ILE 55 CG2 25 1 Y 1 A ILE 55 ? CD1 ? A ILE 55 CD1 26 1 Y 1 A LYS 64 ? CG ? A LYS 64 CG 27 1 Y 1 A LYS 64 ? CD ? A LYS 64 CD 28 1 Y 1 A LYS 64 ? CE ? A LYS 64 CE 29 1 Y 1 A LYS 64 ? NZ ? A LYS 64 NZ 30 1 Y 1 A LYS 68 ? CD ? A LYS 68 CD 31 1 Y 1 A LYS 68 ? CE ? A LYS 68 CE 32 1 Y 1 A LYS 68 ? NZ ? A LYS 68 NZ 33 1 Y 1 A GLU 81 ? CG ? A GLU 81 CG 34 1 Y 1 A GLU 81 ? CD ? A GLU 81 CD 35 1 Y 1 A GLU 81 ? OE1 ? A GLU 81 OE1 36 1 Y 1 A GLU 81 ? OE2 ? A GLU 81 OE2 37 1 Y 1 A TYR 99 ? CG ? A TYR 99 CG 38 1 Y 1 A TYR 99 ? CD1 ? A TYR 99 CD1 39 1 Y 1 A TYR 99 ? CD2 ? A TYR 99 CD2 40 1 Y 1 A TYR 99 ? CE1 ? A TYR 99 CE1 41 1 Y 1 A TYR 99 ? CE2 ? A TYR 99 CE2 42 1 Y 1 A TYR 99 ? CZ ? A TYR 99 CZ 43 1 Y 1 A TYR 99 ? OH ? A TYR 99 OH 44 1 Y 1 A SER 102 ? OG ? A SER 102 OG 45 1 Y 1 A SER 115 ? OG ? A SER 115 OG 46 1 Y 1 A LYS 119 ? CG ? A LYS 119 CG 47 1 Y 1 A LYS 119 ? CD ? A LYS 119 CD 48 1 Y 1 A LYS 119 ? CE ? A LYS 119 CE 49 1 Y 1 A LYS 119 ? NZ ? A LYS 119 NZ 50 1 Y 1 A LYS 140 ? CG ? A LYS 140 CG 51 1 Y 1 A LYS 140 ? CD ? A LYS 140 CD 52 1 Y 1 A LYS 140 ? CE ? A LYS 140 CE 53 1 Y 1 A LYS 140 ? NZ ? A LYS 140 NZ 54 1 Y 1 A LYS 148 ? CD ? A LYS 148 CD 55 1 Y 1 A LYS 148 ? CE ? A LYS 148 CE 56 1 Y 1 A LYS 148 ? NZ ? A LYS 148 NZ 57 1 Y 1 A GLN 155 ? CG ? A GLN 155 CG 58 1 Y 1 A GLN 155 ? CD ? A GLN 155 CD 59 1 Y 1 A GLN 155 ? OE1 ? A GLN 155 OE1 60 1 Y 1 A GLN 155 ? NE2 ? A GLN 155 NE2 61 1 Y 1 A SER 179 ? OG ? A SER 179 OG 62 1 Y 1 A GLU 187 ? CG ? A GLU 187 CG 63 1 Y 1 A GLU 187 ? CD ? A GLU 187 CD 64 1 Y 1 A GLU 187 ? OE1 ? A GLU 187 OE1 65 1 Y 1 A GLU 187 ? OE2 ? A GLU 187 OE2 66 1 Y 1 A LYS 191 ? CE ? A LYS 191 CE 67 1 Y 1 A LYS 191 ? NZ ? A LYS 191 NZ 68 1 Y 1 A SER 201 ? OG ? A SER 201 OG 69 1 Y 1 A SER 202 ? OG ? A SER 202 OG 70 1 Y 1 A LYS 216 ? CG ? A LYS 216 CG 71 1 Y 1 A LYS 216 ? CD ? A LYS 216 CD 72 1 Y 1 A LYS 216 ? CE ? A LYS 216 CE 73 1 Y 1 A LYS 216 ? NZ ? A LYS 216 NZ 74 1 Y 1 A LYS 217 ? CD ? A LYS 217 CD 75 1 Y 1 A LYS 217 ? CE ? A LYS 217 CE 76 1 Y 1 A LYS 217 ? NZ ? A LYS 217 NZ 77 1 Y 1 A LYS 218 ? CG ? A LYS 218 CG 78 1 Y 1 A LYS 218 ? CD ? A LYS 218 CD 79 1 Y 1 A LYS 218 ? CE ? A LYS 218 CE 80 1 Y 1 A LYS 218 ? NZ ? A LYS 218 NZ 81 1 Y 1 A LYS 234 ? CD ? A LYS 234 CD 82 1 Y 1 A LYS 234 ? CE ? A LYS 234 CE 83 1 Y 1 A LYS 234 ? NZ ? A LYS 234 NZ 84 1 Y 1 A LYS 243 ? CG ? A LYS 243 CG 85 1 Y 1 A LYS 243 ? CD ? A LYS 243 CD 86 1 Y 1 A LYS 243 ? CE ? A LYS 243 CE 87 1 Y 1 A LYS 243 ? NZ ? A LYS 243 NZ 88 1 Y 1 A LYS 249 ? CG ? A LYS 249 CG 89 1 Y 1 A LYS 249 ? CD ? A LYS 249 CD 90 1 Y 1 A LYS 249 ? CE ? A LYS 249 CE 91 1 Y 1 A LYS 249 ? NZ ? A LYS 249 NZ 92 1 Y 1 A LYS 255 ? CG ? A LYS 255 CG 93 1 Y 1 A LYS 255 ? CD ? A LYS 255 CD 94 1 Y 1 A LYS 255 ? CE ? A LYS 255 CE 95 1 Y 1 A LYS 255 ? NZ ? A LYS 255 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 1 ? A GLY 1 2 1 Y 1 A SER 257 ? A SER 257 3 1 Y 1 A SER 258 ? A SER 258 4 1 Y 1 A GLU 259 ? A GLU 259 5 1 Y 1 A LYS 260 ? A LYS 260 6 1 Y 1 A ASN 261 ? A ASN 261 7 1 Y 1 A LYS 262 ? A LYS 262 8 1 Y 1 A LYS 263 ? A LYS 263 9 1 Y 1 A ILE 264 ? A ILE 264 10 1 Y 1 A MSE 265 ? A MSE 265 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ADENOSINE MONOPHOSPHATE' AMP 3 'ZINC ION' ZN 4 'TRIETHYLENE GLYCOL' PGE 5 water HOH #