data_3JX9 # _entry.id 3JX9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3JX9 pdb_00003jx9 10.2210/pdb3jx9/pdb RCSB RCSB055274 ? ? WWPDB D_1000055274 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 392463 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3JX9 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-09-18 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of Putative phosphoheptose isomerase (YP_001815198.1) from EXIGUOBACTERIUM SP. 255-15 at 1.95 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3JX9 _cell.length_a 81.658 _cell.length_b 81.658 _cell.length_c 117.652 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 12 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3JX9 _symmetry.Int_Tables_number 154 _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative phosphoheptose isomerase' 19249.414 2 ? ? ? ? 2 non-polymer syn 'CHLORIDE ION' 35.453 3 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 water nat water 18.015 312 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)LKILATQFNGKLQTLTKQEDELFDVVRLLAQALVGQGKVYLDAYGEFEGLYP(MSE)LSDGPDQ(MSE)KRVTK IKDHKTLHAVDRVLIFTPDTERSDLLASLARYDAWHTPYSIITLGDVTETLERSIAPLALKFDKGLLPAEDGSRHGLPSL ALGAFLLTHILTQLQE(MSE)TEEWE ; _entity_poly.pdbx_seq_one_letter_code_can ;GMLKILATQFNGKLQTLTKQEDELFDVVRLLAQALVGQGKVYLDAYGEFEGLYPMLSDGPDQMKRVTKIKDHKTLHAVDR VLIFTPDTERSDLLASLARYDAWHTPYSIITLGDVTETLERSIAPLALKFDKGLLPAEDGSRHGLPSLALGAFLLTHILT QLQEMTEEWE ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier 392463 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 LEU n 1 4 LYS n 1 5 ILE n 1 6 LEU n 1 7 ALA n 1 8 THR n 1 9 GLN n 1 10 PHE n 1 11 ASN n 1 12 GLY n 1 13 LYS n 1 14 LEU n 1 15 GLN n 1 16 THR n 1 17 LEU n 1 18 THR n 1 19 LYS n 1 20 GLN n 1 21 GLU n 1 22 ASP n 1 23 GLU n 1 24 LEU n 1 25 PHE n 1 26 ASP n 1 27 VAL n 1 28 VAL n 1 29 ARG n 1 30 LEU n 1 31 LEU n 1 32 ALA n 1 33 GLN n 1 34 ALA n 1 35 LEU n 1 36 VAL n 1 37 GLY n 1 38 GLN n 1 39 GLY n 1 40 LYS n 1 41 VAL n 1 42 TYR n 1 43 LEU n 1 44 ASP n 1 45 ALA n 1 46 TYR n 1 47 GLY n 1 48 GLU n 1 49 PHE n 1 50 GLU n 1 51 GLY n 1 52 LEU n 1 53 TYR n 1 54 PRO n 1 55 MSE n 1 56 LEU n 1 57 SER n 1 58 ASP n 1 59 GLY n 1 60 PRO n 1 61 ASP n 1 62 GLN n 1 63 MSE n 1 64 LYS n 1 65 ARG n 1 66 VAL n 1 67 THR n 1 68 LYS n 1 69 ILE n 1 70 LYS n 1 71 ASP n 1 72 HIS n 1 73 LYS n 1 74 THR n 1 75 LEU n 1 76 HIS n 1 77 ALA n 1 78 VAL n 1 79 ASP n 1 80 ARG n 1 81 VAL n 1 82 LEU n 1 83 ILE n 1 84 PHE n 1 85 THR n 1 86 PRO n 1 87 ASP n 1 88 THR n 1 89 GLU n 1 90 ARG n 1 91 SER n 1 92 ASP n 1 93 LEU n 1 94 LEU n 1 95 ALA n 1 96 SER n 1 97 LEU n 1 98 ALA n 1 99 ARG n 1 100 TYR n 1 101 ASP n 1 102 ALA n 1 103 TRP n 1 104 HIS n 1 105 THR n 1 106 PRO n 1 107 TYR n 1 108 SER n 1 109 ILE n 1 110 ILE n 1 111 THR n 1 112 LEU n 1 113 GLY n 1 114 ASP n 1 115 VAL n 1 116 THR n 1 117 GLU n 1 118 THR n 1 119 LEU n 1 120 GLU n 1 121 ARG n 1 122 SER n 1 123 ILE n 1 124 ALA n 1 125 PRO n 1 126 LEU n 1 127 ALA n 1 128 LEU n 1 129 LYS n 1 130 PHE n 1 131 ASP n 1 132 LYS n 1 133 GLY n 1 134 LEU n 1 135 LEU n 1 136 PRO n 1 137 ALA n 1 138 GLU n 1 139 ASP n 1 140 GLY n 1 141 SER n 1 142 ARG n 1 143 HIS n 1 144 GLY n 1 145 LEU n 1 146 PRO n 1 147 SER n 1 148 LEU n 1 149 ALA n 1 150 LEU n 1 151 GLY n 1 152 ALA n 1 153 PHE n 1 154 LEU n 1 155 LEU n 1 156 THR n 1 157 HIS n 1 158 ILE n 1 159 LEU n 1 160 THR n 1 161 GLN n 1 162 LEU n 1 163 GLN n 1 164 GLU n 1 165 MSE n 1 166 THR n 1 167 GLU n 1 168 GLU n 1 169 TRP n 1 170 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Exig_2733, YP_001815198.1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'DSM 17290 / JCM 13490 / 255-15' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Exiguobacterium sibiricum 255-15' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 262543 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code B1YEL3_EXIS2 _struct_ref.pdbx_db_accession B1YEL3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MLKILATQFNGKLQTLTKQEDELFDVVRLLAQALVGQGKVYLDAYGEFEGLYPMLSDGPDQMKRVTKIKDHKTLHAVDRV LIFTPDTERSDLLASLARYDAWHTPYSIITLGDVTETLERSIAPLALKFDKGLLPAEDGSRHGLPSLALGAFLLTHILTQ LQEMTEEWE ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3JX9 A 2 ? 170 ? B1YEL3 1 ? 169 ? 1 169 2 1 3JX9 B 2 ? 170 ? B1YEL3 1 ? 169 ? 1 169 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3JX9 GLY A 1 ? UNP B1YEL3 ? ? 'expression tag' 0 1 2 3JX9 GLY B 1 ? UNP B1YEL3 ? ? 'expression tag' 0 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3JX9 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.94 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 58.18 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '1.6000M (NH4)2SO4, 0.1000M NaCl, 0.1M HEPES pH 7.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2009-06-11 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97864 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength 0.97864 _diffrn_source.pdbx_wavelength_list ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3JX9 _reflns.d_resolution_high 1.95 _reflns.d_resolution_low 29.412 _reflns.number_obs 33717 _reflns.pdbx_Rmerge_I_obs 0.086 _reflns.pdbx_netI_over_sigmaI 14.000 _reflns.pdbx_Rsym_value 0.086 _reflns.pdbx_redundancy 5.500 _reflns.percent_possible_obs 100.000 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.B_iso_Wilson_estimate 27.798 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.95 2.00 ? 13703 ? 0.577 1.3 0.577 ? 5.60 ? 2466 100.00 1 1 2.00 2.06 ? 13262 ? 0.453 1.7 0.453 ? 5.60 ? 2380 100.00 2 1 2.06 2.12 ? 13035 ? 0.355 2.1 0.355 ? 5.60 ? 2344 100.00 3 1 2.12 2.18 ? 12492 ? 0.287 2.7 0.287 ? 5.60 ? 2246 100.00 4 1 2.18 2.25 ? 12237 ? 0.233 3.3 0.233 ? 5.60 ? 2196 100.00 5 1 2.25 2.33 ? 12009 ? 0.198 3.8 0.198 ? 5.60 ? 2151 100.00 6 1 2.33 2.42 ? 11430 ? 0.168 4.5 0.168 ? 5.60 ? 2049 100.00 7 1 2.42 2.52 ? 11070 ? 0.151 4.9 0.151 ? 5.60 ? 1992 100.00 8 1 2.52 2.63 ? 10591 ? 0.135 5.5 0.135 ? 5.60 ? 1903 100.00 9 1 2.63 2.76 ? 10134 ? 0.108 6.6 0.108 ? 5.60 ? 1821 100.00 10 1 2.76 2.91 ? 9719 ? 0.095 7.3 0.095 ? 5.60 ? 1744 100.00 11 1 2.91 3.08 ? 9058 ? 0.079 8.5 0.079 ? 5.50 ? 1637 100.00 12 1 3.08 3.30 ? 8640 ? 0.074 8.6 0.074 ? 5.50 ? 1563 100.00 13 1 3.30 3.56 ? 8015 ? 0.068 9.4 0.068 ? 5.50 ? 1469 100.00 14 1 3.56 3.90 ? 7250 ? 0.063 9.2 0.063 ? 5.40 ? 1337 100.00 15 1 3.90 4.36 ? 6611 ? 0.055 11.1 0.055 ? 5.40 ? 1218 100.00 16 1 4.36 5.03 ? 5854 ? 0.055 10.7 0.055 ? 5.30 ? 1096 100.00 17 1 5.03 6.17 ? 4886 ? 0.061 10.1 0.061 ? 5.30 ? 930 100.00 18 1 6.17 8.72 ? 3734 ? 0.059 9.2 0.059 ? 5.00 ? 742 100.00 19 1 8.72 29.41 ? 1999 ? 0.047 11.2 0.047 ? 4.60 ? 433 97.50 20 1 # _refine.entry_id 3JX9 _refine.ls_d_res_high 1.950 _refine.ls_d_res_low 29.412 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.960 _refine.ls_number_reflns_obs 33677 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 3. ATOM RECORDS CONTAIN RESIDUAL B FACTORS ONLY. 4. CL IONS AND GLYCEROL MOLECULES ARE MODELED BASED ON CRYSTALLIZATION AND CRYOPROTECTION CONDITIONS. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.164 _refine.ls_R_factor_R_work 0.163 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.188 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1706 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 31.652 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.470 _refine.aniso_B[2][2] 0.470 _refine.aniso_B[3][3] -0.700 _refine.aniso_B[1][2] 0.230 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.966 _refine.correlation_coeff_Fo_to_Fc_free 0.951 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.126 _refine.pdbx_overall_ESU_R_Free 0.115 _refine.overall_SU_ML 0.078 _refine.overall_SU_B 5.154 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 77.30 _refine.B_iso_min 14.56 _refine.occupancy_max 1.00 _refine.occupancy_min 0.37 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2646 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 9 _refine_hist.number_atoms_solvent 312 _refine_hist.number_atoms_total 2967 _refine_hist.d_res_high 1.950 _refine_hist.d_res_low 29.412 # loop_ _refine_ls_restr.type _refine_ls_restr.pdbx_refine_id _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 'X-RAY DIFFRACTION' 2764 0.016 0.022 ? ? r_bond_other_d 'X-RAY DIFFRACTION' 1842 0.001 0.020 ? ? r_angle_refined_deg 'X-RAY DIFFRACTION' 3758 1.426 1.987 ? ? r_angle_other_deg 'X-RAY DIFFRACTION' 4522 0.958 3.000 ? ? r_dihedral_angle_1_deg 'X-RAY DIFFRACTION' 349 5.698 5.000 ? ? r_dihedral_angle_2_deg 'X-RAY DIFFRACTION' 117 39.305 24.359 ? ? r_dihedral_angle_3_deg 'X-RAY DIFFRACTION' 486 14.300 15.000 ? ? r_dihedral_angle_4_deg 'X-RAY DIFFRACTION' 15 16.812 15.000 ? ? r_chiral_restr 'X-RAY DIFFRACTION' 438 0.086 0.200 ? ? r_gen_planes_refined 'X-RAY DIFFRACTION' 3060 0.005 0.020 ? ? r_gen_planes_other 'X-RAY DIFFRACTION' 535 0.001 0.020 ? ? r_nbd_refined 'X-RAY DIFFRACTION' 555 0.217 0.200 ? ? r_nbd_other 'X-RAY DIFFRACTION' 1902 0.197 0.200 ? ? r_nbtor_refined 'X-RAY DIFFRACTION' 1344 0.174 0.200 ? ? r_nbtor_other 'X-RAY DIFFRACTION' 1361 0.088 0.200 ? ? r_xyhbond_nbd_refined 'X-RAY DIFFRACTION' 240 0.145 0.200 ? ? r_symmetry_vdw_refined 'X-RAY DIFFRACTION' 9 0.295 0.200 ? ? r_symmetry_vdw_other 'X-RAY DIFFRACTION' 41 0.241 0.200 ? ? r_symmetry_hbond_refined 'X-RAY DIFFRACTION' 10 0.167 0.200 ? ? r_mcbond_it 'X-RAY DIFFRACTION' 1891 2.092 3.000 ? ? r_mcbond_other 'X-RAY DIFFRACTION' 698 0.616 3.000 ? ? r_mcangle_it 'X-RAY DIFFRACTION' 2772 2.889 5.000 ? ? r_scbond_it 'X-RAY DIFFRACTION' 1135 5.208 8.000 ? ? r_scangle_it 'X-RAY DIFFRACTION' 986 6.993 11.000 ? ? # loop_ _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso 'X-RAY DIFFRACTION' 1 1 'MEDIUM POSITIONAL' A 2158 0.370 0.500 1 ? ? ? 'X-RAY DIFFRACTION' 1 1 'MEDIUM THERMAL' A 2158 0.970 2.000 2 ? ? ? # _refine_ls_shell.d_res_high 1.950 _refine_ls_shell.d_res_low 2.001 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 100.000 _refine_ls_shell.number_reflns_R_work 2336 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.212 _refine_ls_shell.R_factor_R_free 0.248 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 131 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2467 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 A 1 2 B # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.selection_details _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id 1 1 1 4 A 0 A 168 ? . . . . . . . . 1 2 1 4 B 0 B 168 ? . . . . . . . . # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 3JX9 _struct.title 'Crystal structure of Putative phosphoheptose isomerase (YP_001815198.1) from Exiguobacterium sp. 255-15 at 1.95 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;YP_001815198.1, Putative phosphoheptose isomerase, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, Unknown function, ISOMERASE ; _struct_keywords.pdbx_keywords ISOMERASE _struct_keywords.entry_id 3JX9 # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 2 ? F N N 2 ? G N N 4 ? H N N 4 ? # _struct_biol.id 1 _struct_biol.details ;ANALYTICAL SIZE EXCLUSION CHROMATOGRAPHY SUPPORTS THE ASSIGNMENT OF A MONOMER AS THE SIGNIFICANT OLIGOMERIZATION STATE IN SOLUTION. ; # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 1 ? THR A 18 ? GLY A 0 THR A 17 1 ? 18 HELX_P HELX_P2 2 GLN A 20 ? GLY A 37 ? GLN A 19 GLY A 36 1 ? 18 HELX_P HELX_P3 3 GLY A 47 ? LEU A 52 ? GLY A 46 LEU A 51 5 ? 6 HELX_P HELX_P4 4 TYR A 53 ? ASP A 58 ? TYR A 52 ASP A 57 1 ? 6 HELX_P HELX_P5 5 ARG A 90 ? HIS A 104 ? ARG A 89 HIS A 103 1 ? 15 HELX_P HELX_P6 6 THR A 118 ? SER A 122 ? THR A 117 SER A 121 5 ? 5 HELX_P HELX_P7 7 PRO A 146 ? TRP A 169 ? PRO A 145 TRP A 168 1 ? 24 HELX_P HELX_P8 8 GLY B 1 ? LYS B 19 ? GLY B 0 LYS B 18 1 ? 19 HELX_P HELX_P9 9 GLN B 20 ? GLY B 37 ? GLN B 19 GLY B 36 1 ? 18 HELX_P HELX_P10 10 GLY B 47 ? GLY B 51 ? GLY B 46 GLY B 50 5 ? 5 HELX_P HELX_P11 11 LEU B 52 ? GLY B 59 ? LEU B 51 GLY B 58 1 ? 8 HELX_P HELX_P12 12 ARG B 90 ? HIS B 104 ? ARG B 89 HIS B 103 1 ? 15 HELX_P HELX_P13 13 THR B 118 ? SER B 122 ? THR B 117 SER B 121 5 ? 5 HELX_P HELX_P14 14 PRO B 146 ? TRP B 169 ? PRO B 145 TRP B 168 1 ? 24 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLY 1 C ? ? ? 1_555 A MSE 2 N ? ? A GLY 0 A MSE 1 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale2 covale both ? A MSE 2 C ? ? ? 1_555 A LEU 3 N ? ? A MSE 1 A LEU 2 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale3 covale both ? A PRO 54 C ? ? ? 1_555 A MSE 55 N ? ? A PRO 53 A MSE 54 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale4 covale both ? A MSE 55 C ? ? ? 1_555 A LEU 56 N ? ? A MSE 54 A LEU 55 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale5 covale both ? A GLN 62 C ? ? ? 1_555 A MSE 63 N ? ? A GLN 61 A MSE 62 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale6 covale both ? A MSE 63 C ? ? ? 1_555 A LYS 64 N ? ? A MSE 62 A LYS 63 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale7 covale both ? A GLU 164 C ? ? ? 1_555 A MSE 165 N A ? A GLU 163 A MSE 164 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale8 covale both ? A GLU 164 C ? ? ? 1_555 A MSE 165 N B ? A GLU 163 A MSE 164 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale9 covale both ? A MSE 165 C A ? ? 1_555 A THR 166 N ? ? A MSE 164 A THR 165 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale10 covale both ? A MSE 165 C B ? ? 1_555 A THR 166 N ? ? A MSE 164 A THR 165 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale11 covale both ? B GLY 1 C ? ? ? 1_555 B MSE 2 N A ? B GLY 0 B MSE 1 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale12 covale both ? B GLY 1 C ? ? ? 1_555 B MSE 2 N B ? B GLY 0 B MSE 1 1_555 ? ? ? ? ? ? ? 1.348 ? ? covale13 covale both ? B MSE 2 C A ? ? 1_555 B LEU 3 N ? ? B MSE 1 B LEU 2 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale14 covale both ? B MSE 2 C B ? ? 1_555 B LEU 3 N ? ? B MSE 1 B LEU 2 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale15 covale both ? B PRO 54 C ? ? ? 1_555 B MSE 55 N ? ? B PRO 53 B MSE 54 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale16 covale both ? B MSE 55 C ? ? ? 1_555 B LEU 56 N ? ? B MSE 54 B LEU 55 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale17 covale both ? B GLN 62 C ? ? ? 1_555 B MSE 63 N ? ? B GLN 61 B MSE 62 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale18 covale both ? B MSE 63 C ? ? ? 1_555 B LYS 64 N A ? B MSE 62 B LYS 63 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale19 covale both ? B MSE 63 C ? ? ? 1_555 B LYS 64 N B ? B MSE 62 B LYS 63 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale20 covale both ? B GLU 164 C ? ? ? 1_555 B MSE 165 N A ? B GLU 163 B MSE 164 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale21 covale both ? B GLU 164 C ? ? ? 1_555 B MSE 165 N B ? B GLU 163 B MSE 164 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale22 covale both ? B MSE 165 C A ? ? 1_555 B THR 166 N ? ? B MSE 164 B THR 165 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale23 covale both ? B MSE 165 C B ? ? 1_555 B THR 166 N ? ? B MSE 164 B THR 165 1_555 ? ? ? ? ? ? ? 1.324 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? C ? 5 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel B 1 2 ? anti-parallel C 1 2 ? parallel C 2 3 ? parallel C 3 4 ? parallel C 4 5 ? parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 66 ? LYS A 68 ? VAL A 65 LYS A 67 A 2 VAL A 41 ? ALA A 45 ? VAL A 40 ALA A 44 A 3 ARG A 80 ? THR A 85 ? ARG A 79 THR A 84 A 4 TYR A 107 ? THR A 111 ? TYR A 106 THR A 110 A 5 LEU A 126 ? ALA A 127 ? LEU A 125 ALA A 126 B 1 LEU A 135 ? PRO A 136 ? LEU A 134 PRO A 135 B 2 ARG A 142 ? HIS A 143 ? ARG A 141 HIS A 142 C 1 VAL B 66 ? LYS B 68 ? VAL B 65 LYS B 67 C 2 VAL B 41 ? ALA B 45 ? VAL B 40 ALA B 44 C 3 ARG B 80 ? THR B 85 ? ARG B 79 THR B 84 C 4 TYR B 107 ? THR B 111 ? TYR B 106 THR B 110 C 5 LEU B 126 ? ALA B 127 ? LEU B 125 ALA B 126 D 1 LEU B 135 ? PRO B 136 ? LEU B 134 PRO B 135 D 2 ARG B 142 ? HIS B 143 ? ARG B 141 HIS B 142 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O THR A 67 ? O THR A 66 N LEU A 43 ? N LEU A 42 A 2 3 N ASP A 44 ? N ASP A 43 O LEU A 82 ? O LEU A 81 A 3 4 N ILE A 83 ? N ILE A 82 O SER A 108 ? O SER A 107 A 4 5 N THR A 111 ? N THR A 110 O LEU A 126 ? O LEU A 125 B 1 2 N LEU A 135 ? N LEU A 134 O HIS A 143 ? O HIS A 142 C 1 2 O THR B 67 ? O THR B 66 N LEU B 43 ? N LEU B 42 C 2 3 N TYR B 42 ? N TYR B 41 O LEU B 82 ? O LEU B 81 C 3 4 N ILE B 83 ? N ILE B 82 O ILE B 110 ? O ILE B 109 C 4 5 N THR B 111 ? N THR B 110 O LEU B 126 ? O LEU B 125 D 1 2 N LEU B 135 ? N LEU B 134 O HIS B 143 ? O HIS B 142 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CL 170 ? 3 'BINDING SITE FOR RESIDUE CL A 170' AC2 Software A GOL 171 ? 8 'BINDING SITE FOR RESIDUE GOL A 171' AC3 Software B CL 170 ? 2 'BINDING SITE FOR RESIDUE CL B 170' AC4 Software B CL 171 ? 2 'BINDING SITE FOR RESIDUE CL B 171' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 HIS A 76 ? HIS A 75 . ? 1_555 ? 2 AC1 3 ALA A 77 ? ALA A 76 . ? 1_555 ? 3 AC1 3 HOH G . ? HOH A 310 . ? 1_555 ? 4 AC2 8 ASP A 101 ? ASP A 100 . ? 1_555 ? 5 AC2 8 HIS A 104 ? HIS A 103 . ? 1_555 ? 6 AC2 8 THR A 105 ? THR A 104 . ? 1_555 ? 7 AC2 8 TYR A 107 ? TYR A 106 . ? 1_555 ? 8 AC2 8 ARG A 121 ? ARG A 120 . ? 1_555 ? 9 AC2 8 HOH G . ? HOH A 236 . ? 1_555 ? 10 AC2 8 HOH G . ? HOH A 266 . ? 1_555 ? 11 AC2 8 HOH G . ? HOH A 295 . ? 5_665 ? 12 AC3 2 HIS B 76 ? HIS B 75 . ? 1_555 ? 13 AC3 2 HOH H . ? HOH B 257 . ? 1_555 ? 14 AC4 2 THR B 116 ? THR B 115 . ? 1_555 ? 15 AC4 2 GLU B 117 ? GLU B 116 . ? 1_555 ? # _atom_sites.entry_id 3JX9 _atom_sites.fract_transf_matrix[1][1] 0.012246 _atom_sites.fract_transf_matrix[1][2] 0.007070 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014141 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008500 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 0 GLY GLY A . n A 1 2 MSE 2 1 1 MSE MSE A . n A 1 3 LEU 3 2 2 LEU LEU A . n A 1 4 LYS 4 3 3 LYS LYS A . n A 1 5 ILE 5 4 4 ILE ILE A . n A 1 6 LEU 6 5 5 LEU LEU A . n A 1 7 ALA 7 6 6 ALA ALA A . n A 1 8 THR 8 7 7 THR THR A . n A 1 9 GLN 9 8 8 GLN GLN A . n A 1 10 PHE 10 9 9 PHE PHE A . n A 1 11 ASN 11 10 10 ASN ASN A . n A 1 12 GLY 12 11 11 GLY GLY A . n A 1 13 LYS 13 12 12 LYS LYS A . n A 1 14 LEU 14 13 13 LEU LEU A . n A 1 15 GLN 15 14 14 GLN GLN A . n A 1 16 THR 16 15 15 THR THR A . n A 1 17 LEU 17 16 16 LEU LEU A . n A 1 18 THR 18 17 17 THR THR A . n A 1 19 LYS 19 18 18 LYS LYS A . n A 1 20 GLN 20 19 19 GLN GLN A . n A 1 21 GLU 21 20 20 GLU GLU A . n A 1 22 ASP 22 21 21 ASP ASP A . n A 1 23 GLU 23 22 22 GLU GLU A . n A 1 24 LEU 24 23 23 LEU LEU A . n A 1 25 PHE 25 24 24 PHE PHE A . n A 1 26 ASP 26 25 25 ASP ASP A . n A 1 27 VAL 27 26 26 VAL VAL A . n A 1 28 VAL 28 27 27 VAL VAL A . n A 1 29 ARG 29 28 28 ARG ARG A . n A 1 30 LEU 30 29 29 LEU LEU A . n A 1 31 LEU 31 30 30 LEU LEU A . n A 1 32 ALA 32 31 31 ALA ALA A . n A 1 33 GLN 33 32 32 GLN GLN A . n A 1 34 ALA 34 33 33 ALA ALA A . n A 1 35 LEU 35 34 34 LEU LEU A . n A 1 36 VAL 36 35 35 VAL VAL A . n A 1 37 GLY 37 36 36 GLY GLY A . n A 1 38 GLN 38 37 37 GLN GLN A . n A 1 39 GLY 39 38 38 GLY GLY A . n A 1 40 LYS 40 39 39 LYS LYS A . n A 1 41 VAL 41 40 40 VAL VAL A . n A 1 42 TYR 42 41 41 TYR TYR A . n A 1 43 LEU 43 42 42 LEU LEU A . n A 1 44 ASP 44 43 43 ASP ASP A . n A 1 45 ALA 45 44 44 ALA ALA A . n A 1 46 TYR 46 45 45 TYR TYR A . n A 1 47 GLY 47 46 46 GLY GLY A . n A 1 48 GLU 48 47 47 GLU GLU A . n A 1 49 PHE 49 48 48 PHE PHE A . n A 1 50 GLU 50 49 49 GLU GLU A . n A 1 51 GLY 51 50 50 GLY GLY A . n A 1 52 LEU 52 51 51 LEU LEU A . n A 1 53 TYR 53 52 52 TYR TYR A . n A 1 54 PRO 54 53 53 PRO PRO A . n A 1 55 MSE 55 54 54 MSE MSE A . n A 1 56 LEU 56 55 55 LEU LEU A . n A 1 57 SER 57 56 56 SER SER A . n A 1 58 ASP 58 57 57 ASP ASP A . n A 1 59 GLY 59 58 58 GLY GLY A . n A 1 60 PRO 60 59 59 PRO PRO A . n A 1 61 ASP 61 60 60 ASP ASP A . n A 1 62 GLN 62 61 61 GLN GLN A . n A 1 63 MSE 63 62 62 MSE MSE A . n A 1 64 LYS 64 63 63 LYS LYS A . n A 1 65 ARG 65 64 64 ARG ARG A . n A 1 66 VAL 66 65 65 VAL VAL A . n A 1 67 THR 67 66 66 THR THR A . n A 1 68 LYS 68 67 67 LYS LYS A . n A 1 69 ILE 69 68 68 ILE ILE A . n A 1 70 LYS 70 69 69 LYS LYS A . n A 1 71 ASP 71 70 70 ASP ASP A . n A 1 72 HIS 72 71 71 HIS HIS A . n A 1 73 LYS 73 72 72 LYS LYS A . n A 1 74 THR 74 73 73 THR THR A . n A 1 75 LEU 75 74 74 LEU LEU A . n A 1 76 HIS 76 75 75 HIS HIS A . n A 1 77 ALA 77 76 76 ALA ALA A . n A 1 78 VAL 78 77 77 VAL VAL A . n A 1 79 ASP 79 78 78 ASP ASP A . n A 1 80 ARG 80 79 79 ARG ARG A . n A 1 81 VAL 81 80 80 VAL VAL A . n A 1 82 LEU 82 81 81 LEU LEU A . n A 1 83 ILE 83 82 82 ILE ILE A . n A 1 84 PHE 84 83 83 PHE PHE A . n A 1 85 THR 85 84 84 THR THR A . n A 1 86 PRO 86 85 85 PRO PRO A . n A 1 87 ASP 87 86 86 ASP ASP A . n A 1 88 THR 88 87 87 THR THR A . n A 1 89 GLU 89 88 88 GLU GLU A . n A 1 90 ARG 90 89 89 ARG ARG A . n A 1 91 SER 91 90 90 SER SER A . n A 1 92 ASP 92 91 91 ASP ASP A . n A 1 93 LEU 93 92 92 LEU LEU A . n A 1 94 LEU 94 93 93 LEU LEU A . n A 1 95 ALA 95 94 94 ALA ALA A . n A 1 96 SER 96 95 95 SER SER A . n A 1 97 LEU 97 96 96 LEU LEU A . n A 1 98 ALA 98 97 97 ALA ALA A . n A 1 99 ARG 99 98 98 ARG ARG A . n A 1 100 TYR 100 99 99 TYR TYR A . n A 1 101 ASP 101 100 100 ASP ASP A . n A 1 102 ALA 102 101 101 ALA ALA A . n A 1 103 TRP 103 102 102 TRP TRP A . n A 1 104 HIS 104 103 103 HIS HIS A . n A 1 105 THR 105 104 104 THR THR A . n A 1 106 PRO 106 105 105 PRO PRO A . n A 1 107 TYR 107 106 106 TYR TYR A . n A 1 108 SER 108 107 107 SER SER A . n A 1 109 ILE 109 108 108 ILE ILE A . n A 1 110 ILE 110 109 109 ILE ILE A . n A 1 111 THR 111 110 110 THR THR A . n A 1 112 LEU 112 111 111 LEU LEU A . n A 1 113 GLY 113 112 112 GLY GLY A . n A 1 114 ASP 114 113 113 ASP ASP A . n A 1 115 VAL 115 114 114 VAL VAL A . n A 1 116 THR 116 115 115 THR THR A . n A 1 117 GLU 117 116 116 GLU GLU A . n A 1 118 THR 118 117 117 THR THR A . n A 1 119 LEU 119 118 118 LEU LEU A . n A 1 120 GLU 120 119 119 GLU GLU A . n A 1 121 ARG 121 120 120 ARG ARG A . n A 1 122 SER 122 121 121 SER SER A . n A 1 123 ILE 123 122 122 ILE ILE A . n A 1 124 ALA 124 123 123 ALA ALA A . n A 1 125 PRO 125 124 124 PRO PRO A . n A 1 126 LEU 126 125 125 LEU LEU A . n A 1 127 ALA 127 126 126 ALA ALA A . n A 1 128 LEU 128 127 127 LEU LEU A . n A 1 129 LYS 129 128 128 LYS LYS A . n A 1 130 PHE 130 129 129 PHE PHE A . n A 1 131 ASP 131 130 130 ASP ASP A . n A 1 132 LYS 132 131 131 LYS LYS A . n A 1 133 GLY 133 132 132 GLY GLY A . n A 1 134 LEU 134 133 133 LEU LEU A . n A 1 135 LEU 135 134 134 LEU LEU A . n A 1 136 PRO 136 135 135 PRO PRO A . n A 1 137 ALA 137 136 136 ALA ALA A . n A 1 138 GLU 138 137 137 GLU GLU A . n A 1 139 ASP 139 138 138 ASP ASP A . n A 1 140 GLY 140 139 139 GLY GLY A . n A 1 141 SER 141 140 140 SER SER A . n A 1 142 ARG 142 141 141 ARG ARG A . n A 1 143 HIS 143 142 142 HIS HIS A . n A 1 144 GLY 144 143 143 GLY GLY A . n A 1 145 LEU 145 144 144 LEU LEU A . n A 1 146 PRO 146 145 145 PRO PRO A . n A 1 147 SER 147 146 146 SER SER A . n A 1 148 LEU 148 147 147 LEU LEU A . n A 1 149 ALA 149 148 148 ALA ALA A . n A 1 150 LEU 150 149 149 LEU LEU A . n A 1 151 GLY 151 150 150 GLY GLY A . n A 1 152 ALA 152 151 151 ALA ALA A . n A 1 153 PHE 153 152 152 PHE PHE A . n A 1 154 LEU 154 153 153 LEU LEU A . n A 1 155 LEU 155 154 154 LEU LEU A . n A 1 156 THR 156 155 155 THR THR A . n A 1 157 HIS 157 156 156 HIS HIS A . n A 1 158 ILE 158 157 157 ILE ILE A . n A 1 159 LEU 159 158 158 LEU LEU A . n A 1 160 THR 160 159 159 THR THR A . n A 1 161 GLN 161 160 160 GLN GLN A . n A 1 162 LEU 162 161 161 LEU LEU A . n A 1 163 GLN 163 162 162 GLN GLN A . n A 1 164 GLU 164 163 163 GLU GLU A . n A 1 165 MSE 165 164 164 MSE MSE A . n A 1 166 THR 166 165 165 THR THR A . n A 1 167 GLU 167 166 166 GLU GLU A . n A 1 168 GLU 168 167 167 GLU GLU A . n A 1 169 TRP 169 168 168 TRP TRP A . n A 1 170 GLU 170 169 ? ? ? A . n B 1 1 GLY 1 0 0 GLY GLY B . n B 1 2 MSE 2 1 1 MSE MSE B . n B 1 3 LEU 3 2 2 LEU LEU B . n B 1 4 LYS 4 3 3 LYS LYS B . n B 1 5 ILE 5 4 4 ILE ILE B . n B 1 6 LEU 6 5 5 LEU LEU B . n B 1 7 ALA 7 6 6 ALA ALA B . n B 1 8 THR 8 7 7 THR THR B . n B 1 9 GLN 9 8 8 GLN GLN B . n B 1 10 PHE 10 9 9 PHE PHE B . n B 1 11 ASN 11 10 10 ASN ASN B . n B 1 12 GLY 12 11 11 GLY GLY B . n B 1 13 LYS 13 12 12 LYS LYS B . n B 1 14 LEU 14 13 13 LEU LEU B . n B 1 15 GLN 15 14 14 GLN GLN B . n B 1 16 THR 16 15 15 THR THR B . n B 1 17 LEU 17 16 16 LEU LEU B . n B 1 18 THR 18 17 17 THR THR B . n B 1 19 LYS 19 18 18 LYS LYS B . n B 1 20 GLN 20 19 19 GLN GLN B . n B 1 21 GLU 21 20 20 GLU GLU B . n B 1 22 ASP 22 21 21 ASP ASP B . n B 1 23 GLU 23 22 22 GLU GLU B . n B 1 24 LEU 24 23 23 LEU LEU B . n B 1 25 PHE 25 24 24 PHE PHE B . n B 1 26 ASP 26 25 25 ASP ASP B . n B 1 27 VAL 27 26 26 VAL VAL B . n B 1 28 VAL 28 27 27 VAL VAL B . n B 1 29 ARG 29 28 28 ARG ARG B . n B 1 30 LEU 30 29 29 LEU LEU B . n B 1 31 LEU 31 30 30 LEU LEU B . n B 1 32 ALA 32 31 31 ALA ALA B . n B 1 33 GLN 33 32 32 GLN GLN B . n B 1 34 ALA 34 33 33 ALA ALA B . n B 1 35 LEU 35 34 34 LEU LEU B . n B 1 36 VAL 36 35 35 VAL VAL B . n B 1 37 GLY 37 36 36 GLY GLY B . n B 1 38 GLN 38 37 37 GLN GLN B . n B 1 39 GLY 39 38 38 GLY GLY B . n B 1 40 LYS 40 39 39 LYS LYS B . n B 1 41 VAL 41 40 40 VAL VAL B . n B 1 42 TYR 42 41 41 TYR TYR B . n B 1 43 LEU 43 42 42 LEU LEU B . n B 1 44 ASP 44 43 43 ASP ASP B . n B 1 45 ALA 45 44 44 ALA ALA B . n B 1 46 TYR 46 45 45 TYR TYR B . n B 1 47 GLY 47 46 46 GLY GLY B . n B 1 48 GLU 48 47 47 GLU GLU B . n B 1 49 PHE 49 48 48 PHE PHE B . n B 1 50 GLU 50 49 49 GLU GLU B . n B 1 51 GLY 51 50 50 GLY GLY B . n B 1 52 LEU 52 51 51 LEU LEU B . n B 1 53 TYR 53 52 52 TYR TYR B . n B 1 54 PRO 54 53 53 PRO PRO B . n B 1 55 MSE 55 54 54 MSE MSE B . n B 1 56 LEU 56 55 55 LEU LEU B . n B 1 57 SER 57 56 56 SER SER B . n B 1 58 ASP 58 57 57 ASP ASP B . n B 1 59 GLY 59 58 58 GLY GLY B . n B 1 60 PRO 60 59 59 PRO PRO B . n B 1 61 ASP 61 60 60 ASP ASP B . n B 1 62 GLN 62 61 61 GLN GLN B . n B 1 63 MSE 63 62 62 MSE MSE B . n B 1 64 LYS 64 63 63 LYS LYS B . n B 1 65 ARG 65 64 64 ARG ARG B . n B 1 66 VAL 66 65 65 VAL VAL B . n B 1 67 THR 67 66 66 THR THR B . n B 1 68 LYS 68 67 67 LYS LYS B . n B 1 69 ILE 69 68 68 ILE ILE B . n B 1 70 LYS 70 69 69 LYS LYS B . n B 1 71 ASP 71 70 70 ASP ASP B . n B 1 72 HIS 72 71 71 HIS HIS B . n B 1 73 LYS 73 72 72 LYS LYS B . n B 1 74 THR 74 73 73 THR THR B . n B 1 75 LEU 75 74 74 LEU LEU B . n B 1 76 HIS 76 75 75 HIS HIS B . n B 1 77 ALA 77 76 76 ALA ALA B . n B 1 78 VAL 78 77 77 VAL VAL B . n B 1 79 ASP 79 78 78 ASP ASP B . n B 1 80 ARG 80 79 79 ARG ARG B . n B 1 81 VAL 81 80 80 VAL VAL B . n B 1 82 LEU 82 81 81 LEU LEU B . n B 1 83 ILE 83 82 82 ILE ILE B . n B 1 84 PHE 84 83 83 PHE PHE B . n B 1 85 THR 85 84 84 THR THR B . n B 1 86 PRO 86 85 85 PRO PRO B . n B 1 87 ASP 87 86 86 ASP ASP B . n B 1 88 THR 88 87 87 THR THR B . n B 1 89 GLU 89 88 88 GLU GLU B . n B 1 90 ARG 90 89 89 ARG ARG B . n B 1 91 SER 91 90 90 SER SER B . n B 1 92 ASP 92 91 91 ASP ASP B . n B 1 93 LEU 93 92 92 LEU LEU B . n B 1 94 LEU 94 93 93 LEU LEU B . n B 1 95 ALA 95 94 94 ALA ALA B . n B 1 96 SER 96 95 95 SER SER B . n B 1 97 LEU 97 96 96 LEU LEU B . n B 1 98 ALA 98 97 97 ALA ALA B . n B 1 99 ARG 99 98 98 ARG ARG B . n B 1 100 TYR 100 99 99 TYR TYR B . n B 1 101 ASP 101 100 100 ASP ASP B . n B 1 102 ALA 102 101 101 ALA ALA B . n B 1 103 TRP 103 102 102 TRP TRP B . n B 1 104 HIS 104 103 103 HIS HIS B . n B 1 105 THR 105 104 104 THR THR B . n B 1 106 PRO 106 105 105 PRO PRO B . n B 1 107 TYR 107 106 106 TYR TYR B . n B 1 108 SER 108 107 107 SER SER B . n B 1 109 ILE 109 108 108 ILE ILE B . n B 1 110 ILE 110 109 109 ILE ILE B . n B 1 111 THR 111 110 110 THR THR B . n B 1 112 LEU 112 111 111 LEU LEU B . n B 1 113 GLY 113 112 112 GLY GLY B . n B 1 114 ASP 114 113 113 ASP ASP B . n B 1 115 VAL 115 114 114 VAL VAL B . n B 1 116 THR 116 115 115 THR THR B . n B 1 117 GLU 117 116 116 GLU GLU B . n B 1 118 THR 118 117 117 THR THR B . n B 1 119 LEU 119 118 118 LEU LEU B . n B 1 120 GLU 120 119 119 GLU GLU B . n B 1 121 ARG 121 120 120 ARG ARG B . n B 1 122 SER 122 121 121 SER SER B . n B 1 123 ILE 123 122 122 ILE ILE B . n B 1 124 ALA 124 123 123 ALA ALA B . n B 1 125 PRO 125 124 124 PRO PRO B . n B 1 126 LEU 126 125 125 LEU LEU B . n B 1 127 ALA 127 126 126 ALA ALA B . n B 1 128 LEU 128 127 127 LEU LEU B . n B 1 129 LYS 129 128 128 LYS LYS B . n B 1 130 PHE 130 129 129 PHE PHE B . n B 1 131 ASP 131 130 130 ASP ASP B . n B 1 132 LYS 132 131 131 LYS LYS B . n B 1 133 GLY 133 132 132 GLY GLY B . n B 1 134 LEU 134 133 133 LEU LEU B . n B 1 135 LEU 135 134 134 LEU LEU B . n B 1 136 PRO 136 135 135 PRO PRO B . n B 1 137 ALA 137 136 136 ALA ALA B . n B 1 138 GLU 138 137 137 GLU GLU B . n B 1 139 ASP 139 138 138 ASP ASP B . n B 1 140 GLY 140 139 139 GLY GLY B . n B 1 141 SER 141 140 140 SER SER B . n B 1 142 ARG 142 141 141 ARG ARG B . n B 1 143 HIS 143 142 142 HIS HIS B . n B 1 144 GLY 144 143 143 GLY GLY B . n B 1 145 LEU 145 144 144 LEU LEU B . n B 1 146 PRO 146 145 145 PRO PRO B . n B 1 147 SER 147 146 146 SER SER B . n B 1 148 LEU 148 147 147 LEU LEU B . n B 1 149 ALA 149 148 148 ALA ALA B . n B 1 150 LEU 150 149 149 LEU LEU B . n B 1 151 GLY 151 150 150 GLY GLY B . n B 1 152 ALA 152 151 151 ALA ALA B . n B 1 153 PHE 153 152 152 PHE PHE B . n B 1 154 LEU 154 153 153 LEU LEU B . n B 1 155 LEU 155 154 154 LEU LEU B . n B 1 156 THR 156 155 155 THR THR B . n B 1 157 HIS 157 156 156 HIS HIS B . n B 1 158 ILE 158 157 157 ILE ILE B . n B 1 159 LEU 159 158 158 LEU LEU B . n B 1 160 THR 160 159 159 THR THR B . n B 1 161 GLN 161 160 160 GLN GLN B . n B 1 162 LEU 162 161 161 LEU LEU B . n B 1 163 GLN 163 162 162 GLN GLN B . n B 1 164 GLU 164 163 163 GLU GLU B . n B 1 165 MSE 165 164 164 MSE MSE B . n B 1 166 THR 166 165 165 THR THR B . n B 1 167 GLU 167 166 166 GLU GLU B . n B 1 168 GLU 168 167 167 GLU GLU B . n B 1 169 TRP 169 168 168 TRP TRP B . n B 1 170 GLU 170 169 ? ? ? B . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL 1 170 1 CL CL A . D 3 GOL 1 171 4 GOL GOL A . E 2 CL 1 170 2 CL CL B . F 2 CL 1 171 3 CL CL B . G 4 HOH 1 172 172 HOH HOH A . G 4 HOH 2 173 173 HOH HOH A . G 4 HOH 3 174 174 HOH HOH A . G 4 HOH 4 175 5 HOH HOH A . G 4 HOH 5 176 176 HOH HOH A . G 4 HOH 6 177 177 HOH HOH A . G 4 HOH 7 178 178 HOH HOH A . G 4 HOH 8 179 179 HOH HOH A . G 4 HOH 9 180 180 HOH HOH A . G 4 HOH 10 181 181 HOH HOH A . G 4 HOH 11 182 182 HOH HOH A . G 4 HOH 12 183 183 HOH HOH A . G 4 HOH 13 184 6 HOH HOH A . G 4 HOH 14 185 9 HOH HOH A . G 4 HOH 15 186 186 HOH HOH A . G 4 HOH 16 187 11 HOH HOH A . G 4 HOH 17 188 12 HOH HOH A . G 4 HOH 18 189 189 HOH HOH A . G 4 HOH 19 190 190 HOH HOH A . G 4 HOH 20 191 14 HOH HOH A . G 4 HOH 21 192 15 HOH HOH A . G 4 HOH 22 193 193 HOH HOH A . G 4 HOH 23 194 16 HOH HOH A . G 4 HOH 24 195 19 HOH HOH A . G 4 HOH 25 196 20 HOH HOH A . G 4 HOH 26 197 197 HOH HOH A . G 4 HOH 27 198 21 HOH HOH A . G 4 HOH 28 199 199 HOH HOH A . G 4 HOH 29 200 25 HOH HOH A . G 4 HOH 30 201 26 HOH HOH A . G 4 HOH 31 202 202 HOH HOH A . G 4 HOH 32 203 203 HOH HOH A . G 4 HOH 33 204 204 HOH HOH A . G 4 HOH 34 205 205 HOH HOH A . G 4 HOH 35 206 206 HOH HOH A . G 4 HOH 36 207 207 HOH HOH A . G 4 HOH 37 208 208 HOH HOH A . G 4 HOH 38 209 209 HOH HOH A . G 4 HOH 39 210 27 HOH HOH A . G 4 HOH 40 211 28 HOH HOH A . G 4 HOH 41 212 29 HOH HOH A . G 4 HOH 42 213 213 HOH HOH A . G 4 HOH 43 214 214 HOH HOH A . G 4 HOH 44 215 215 HOH HOH A . G 4 HOH 45 216 216 HOH HOH A . G 4 HOH 46 217 30 HOH HOH A . G 4 HOH 47 218 218 HOH HOH A . G 4 HOH 48 219 31 HOH HOH A . G 4 HOH 49 220 32 HOH HOH A . G 4 HOH 50 221 33 HOH HOH A . G 4 HOH 51 222 222 HOH HOH A . G 4 HOH 52 223 35 HOH HOH A . G 4 HOH 53 224 224 HOH HOH A . G 4 HOH 54 225 225 HOH HOH A . G 4 HOH 55 226 36 HOH HOH A . G 4 HOH 56 227 37 HOH HOH A . G 4 HOH 57 228 39 HOH HOH A . G 4 HOH 58 229 229 HOH HOH A . G 4 HOH 59 230 41 HOH HOH A . G 4 HOH 60 231 231 HOH HOH A . G 4 HOH 61 232 43 HOH HOH A . G 4 HOH 62 233 45 HOH HOH A . G 4 HOH 63 234 46 HOH HOH A . G 4 HOH 64 235 47 HOH HOH A . G 4 HOH 65 236 49 HOH HOH A . G 4 HOH 66 237 51 HOH HOH A . G 4 HOH 67 238 53 HOH HOH A . G 4 HOH 68 239 239 HOH HOH A . G 4 HOH 69 240 240 HOH HOH A . G 4 HOH 70 241 55 HOH HOH A . G 4 HOH 71 242 56 HOH HOH A . G 4 HOH 72 243 243 HOH HOH A . G 4 HOH 73 244 58 HOH HOH A . G 4 HOH 74 245 62 HOH HOH A . G 4 HOH 75 246 63 HOH HOH A . G 4 HOH 76 247 65 HOH HOH A . G 4 HOH 77 248 248 HOH HOH A . G 4 HOH 78 249 249 HOH HOH A . G 4 HOH 79 250 250 HOH HOH A . G 4 HOH 80 251 251 HOH HOH A . G 4 HOH 81 252 252 HOH HOH A . G 4 HOH 82 253 66 HOH HOH A . G 4 HOH 83 254 254 HOH HOH A . G 4 HOH 84 255 255 HOH HOH A . G 4 HOH 85 256 256 HOH HOH A . G 4 HOH 86 257 257 HOH HOH A . G 4 HOH 87 258 67 HOH HOH A . G 4 HOH 88 259 259 HOH HOH A . G 4 HOH 89 260 68 HOH HOH A . G 4 HOH 90 261 261 HOH HOH A . G 4 HOH 91 262 72 HOH HOH A . G 4 HOH 92 263 263 HOH HOH A . G 4 HOH 93 264 76 HOH HOH A . G 4 HOH 94 265 265 HOH HOH A . G 4 HOH 95 266 77 HOH HOH A . G 4 HOH 96 267 79 HOH HOH A . G 4 HOH 97 268 268 HOH HOH A . G 4 HOH 98 269 269 HOH HOH A . G 4 HOH 99 270 270 HOH HOH A . G 4 HOH 100 271 271 HOH HOH A . G 4 HOH 101 272 80 HOH HOH A . G 4 HOH 102 273 273 HOH HOH A . G 4 HOH 103 274 86 HOH HOH A . G 4 HOH 104 275 275 HOH HOH A . G 4 HOH 105 276 276 HOH HOH A . G 4 HOH 106 277 277 HOH HOH A . G 4 HOH 107 278 278 HOH HOH A . G 4 HOH 108 279 87 HOH HOH A . G 4 HOH 109 280 280 HOH HOH A . G 4 HOH 110 281 281 HOH HOH A . G 4 HOH 111 282 89 HOH HOH A . G 4 HOH 112 283 90 HOH HOH A . G 4 HOH 113 284 284 HOH HOH A . G 4 HOH 114 285 92 HOH HOH A . G 4 HOH 115 286 286 HOH HOH A . G 4 HOH 116 287 287 HOH HOH A . G 4 HOH 117 288 288 HOH HOH A . G 4 HOH 118 289 289 HOH HOH A . G 4 HOH 119 290 94 HOH HOH A . G 4 HOH 120 291 291 HOH HOH A . G 4 HOH 121 292 292 HOH HOH A . G 4 HOH 122 293 293 HOH HOH A . G 4 HOH 123 294 294 HOH HOH A . G 4 HOH 124 295 95 HOH HOH A . G 4 HOH 125 296 99 HOH HOH A . G 4 HOH 126 297 297 HOH HOH A . G 4 HOH 127 298 101 HOH HOH A . G 4 HOH 128 299 103 HOH HOH A . G 4 HOH 129 300 300 HOH HOH A . G 4 HOH 130 301 301 HOH HOH A . G 4 HOH 131 302 302 HOH HOH A . G 4 HOH 132 303 104 HOH HOH A . G 4 HOH 133 304 106 HOH HOH A . G 4 HOH 134 305 107 HOH HOH A . G 4 HOH 135 306 108 HOH HOH A . G 4 HOH 136 307 307 HOH HOH A . G 4 HOH 137 308 109 HOH HOH A . G 4 HOH 138 309 309 HOH HOH A . G 4 HOH 139 310 110 HOH HOH A . G 4 HOH 140 311 112 HOH HOH A . G 4 HOH 141 312 312 HOH HOH A . G 4 HOH 142 313 113 HOH HOH A . G 4 HOH 143 314 115 HOH HOH A . G 4 HOH 144 315 118 HOH HOH A . G 4 HOH 145 316 119 HOH HOH A . G 4 HOH 146 317 120 HOH HOH A . G 4 HOH 147 318 124 HOH HOH A . G 4 HOH 148 319 127 HOH HOH A . G 4 HOH 149 320 128 HOH HOH A . G 4 HOH 150 321 129 HOH HOH A . G 4 HOH 151 322 130 HOH HOH A . G 4 HOH 152 323 136 HOH HOH A . G 4 HOH 153 324 138 HOH HOH A . G 4 HOH 154 325 139 HOH HOH A . G 4 HOH 155 326 144 HOH HOH A . G 4 HOH 156 327 145 HOH HOH A . G 4 HOH 157 328 146 HOH HOH A . G 4 HOH 158 329 149 HOH HOH A . G 4 HOH 159 330 150 HOH HOH A . G 4 HOH 160 331 151 HOH HOH A . G 4 HOH 161 332 152 HOH HOH A . G 4 HOH 162 333 155 HOH HOH A . G 4 HOH 163 334 156 HOH HOH A . G 4 HOH 164 335 157 HOH HOH A . G 4 HOH 165 336 160 HOH HOH A . G 4 HOH 166 337 161 HOH HOH A . G 4 HOH 167 338 162 HOH HOH A . G 4 HOH 168 339 163 HOH HOH A . G 4 HOH 169 340 164 HOH HOH A . G 4 HOH 170 341 171 HOH HOH A . H 4 HOH 1 172 7 HOH HOH B . H 4 HOH 2 173 8 HOH HOH B . H 4 HOH 3 174 10 HOH HOH B . H 4 HOH 4 175 175 HOH HOH B . H 4 HOH 5 176 13 HOH HOH B . H 4 HOH 6 177 17 HOH HOH B . H 4 HOH 7 178 18 HOH HOH B . H 4 HOH 8 179 22 HOH HOH B . H 4 HOH 9 180 23 HOH HOH B . H 4 HOH 10 181 24 HOH HOH B . H 4 HOH 11 182 34 HOH HOH B . H 4 HOH 12 183 38 HOH HOH B . H 4 HOH 13 184 184 HOH HOH B . H 4 HOH 14 185 185 HOH HOH B . H 4 HOH 15 186 40 HOH HOH B . H 4 HOH 16 187 187 HOH HOH B . H 4 HOH 17 188 188 HOH HOH B . H 4 HOH 18 189 42 HOH HOH B . H 4 HOH 19 190 44 HOH HOH B . H 4 HOH 20 191 191 HOH HOH B . H 4 HOH 21 192 192 HOH HOH B . H 4 HOH 22 193 48 HOH HOH B . H 4 HOH 23 194 194 HOH HOH B . H 4 HOH 24 195 195 HOH HOH B . H 4 HOH 25 196 196 HOH HOH B . H 4 HOH 26 197 50 HOH HOH B . H 4 HOH 27 198 198 HOH HOH B . H 4 HOH 28 199 52 HOH HOH B . H 4 HOH 29 200 200 HOH HOH B . H 4 HOH 30 201 201 HOH HOH B . H 4 HOH 31 202 54 HOH HOH B . H 4 HOH 32 203 57 HOH HOH B . H 4 HOH 33 204 59 HOH HOH B . H 4 HOH 34 205 60 HOH HOH B . H 4 HOH 35 206 61 HOH HOH B . H 4 HOH 36 207 64 HOH HOH B . H 4 HOH 37 208 69 HOH HOH B . H 4 HOH 38 209 70 HOH HOH B . H 4 HOH 39 210 210 HOH HOH B . H 4 HOH 40 211 211 HOH HOH B . H 4 HOH 41 212 212 HOH HOH B . H 4 HOH 42 213 71 HOH HOH B . H 4 HOH 43 214 73 HOH HOH B . H 4 HOH 44 215 74 HOH HOH B . H 4 HOH 45 216 75 HOH HOH B . H 4 HOH 46 217 217 HOH HOH B . H 4 HOH 47 218 78 HOH HOH B . H 4 HOH 48 219 219 HOH HOH B . H 4 HOH 49 220 220 HOH HOH B . H 4 HOH 50 221 221 HOH HOH B . H 4 HOH 51 222 81 HOH HOH B . H 4 HOH 52 223 223 HOH HOH B . H 4 HOH 53 224 82 HOH HOH B . H 4 HOH 54 225 83 HOH HOH B . H 4 HOH 55 226 226 HOH HOH B . H 4 HOH 56 227 227 HOH HOH B . H 4 HOH 57 228 228 HOH HOH B . H 4 HOH 58 229 84 HOH HOH B . H 4 HOH 59 230 230 HOH HOH B . H 4 HOH 60 231 85 HOH HOH B . H 4 HOH 61 232 232 HOH HOH B . H 4 HOH 62 233 233 HOH HOH B . H 4 HOH 63 234 234 HOH HOH B . H 4 HOH 64 235 235 HOH HOH B . H 4 HOH 65 236 236 HOH HOH B . H 4 HOH 66 237 237 HOH HOH B . H 4 HOH 67 238 238 HOH HOH B . H 4 HOH 68 239 88 HOH HOH B . H 4 HOH 69 240 91 HOH HOH B . H 4 HOH 70 241 241 HOH HOH B . H 4 HOH 71 242 242 HOH HOH B . H 4 HOH 72 243 93 HOH HOH B . H 4 HOH 73 244 244 HOH HOH B . H 4 HOH 74 245 245 HOH HOH B . H 4 HOH 75 246 246 HOH HOH B . H 4 HOH 76 247 247 HOH HOH B . H 4 HOH 77 248 96 HOH HOH B . H 4 HOH 78 249 97 HOH HOH B . H 4 HOH 79 250 98 HOH HOH B . H 4 HOH 80 251 100 HOH HOH B . H 4 HOH 81 252 102 HOH HOH B . H 4 HOH 82 253 253 HOH HOH B . H 4 HOH 83 254 105 HOH HOH B . H 4 HOH 84 255 111 HOH HOH B . H 4 HOH 85 256 114 HOH HOH B . H 4 HOH 86 257 116 HOH HOH B . H 4 HOH 87 258 258 HOH HOH B . H 4 HOH 88 259 117 HOH HOH B . H 4 HOH 89 260 260 HOH HOH B . H 4 HOH 90 261 121 HOH HOH B . H 4 HOH 91 262 262 HOH HOH B . H 4 HOH 92 263 122 HOH HOH B . H 4 HOH 93 264 264 HOH HOH B . H 4 HOH 94 265 123 HOH HOH B . H 4 HOH 95 266 266 HOH HOH B . H 4 HOH 96 267 267 HOH HOH B . H 4 HOH 97 268 125 HOH HOH B . H 4 HOH 98 269 126 HOH HOH B . H 4 HOH 99 270 131 HOH HOH B . H 4 HOH 100 271 132 HOH HOH B . H 4 HOH 101 272 272 HOH HOH B . H 4 HOH 102 273 133 HOH HOH B . H 4 HOH 103 274 274 HOH HOH B . H 4 HOH 104 275 134 HOH HOH B . H 4 HOH 105 276 135 HOH HOH B . H 4 HOH 106 277 137 HOH HOH B . H 4 HOH 107 278 140 HOH HOH B . H 4 HOH 108 279 279 HOH HOH B . H 4 HOH 109 280 141 HOH HOH B . H 4 HOH 110 281 142 HOH HOH B . H 4 HOH 111 282 282 HOH HOH B . H 4 HOH 112 283 283 HOH HOH B . H 4 HOH 113 284 143 HOH HOH B . H 4 HOH 114 285 285 HOH HOH B . H 4 HOH 115 286 147 HOH HOH B . H 4 HOH 116 287 148 HOH HOH B . H 4 HOH 117 288 153 HOH HOH B . H 4 HOH 118 289 154 HOH HOH B . H 4 HOH 119 290 290 HOH HOH B . H 4 HOH 120 291 158 HOH HOH B . H 4 HOH 121 292 159 HOH HOH B . H 4 HOH 122 293 165 HOH HOH B . H 4 HOH 123 294 166 HOH HOH B . H 4 HOH 124 295 295 HOH HOH B . H 4 HOH 125 296 296 HOH HOH B . H 4 HOH 126 297 167 HOH HOH B . H 4 HOH 127 298 298 HOH HOH B . H 4 HOH 128 299 299 HOH HOH B . H 4 HOH 129 300 168 HOH HOH B . H 4 HOH 130 301 169 HOH HOH B . H 4 HOH 131 302 170 HOH HOH B . H 4 HOH 132 303 303 HOH HOH B . H 4 HOH 133 304 304 HOH HOH B . H 4 HOH 134 305 305 HOH HOH B . H 4 HOH 135 306 306 HOH HOH B . H 4 HOH 136 308 308 HOH HOH B . H 4 HOH 137 310 310 HOH HOH B . H 4 HOH 138 311 311 HOH HOH B . H 4 HOH 139 313 313 HOH HOH B . H 4 HOH 140 314 314 HOH HOH B . H 4 HOH 141 315 315 HOH HOH B . H 4 HOH 142 316 316 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 2 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 55 A MSE 54 ? MET SELENOMETHIONINE 3 A MSE 63 A MSE 62 ? MET SELENOMETHIONINE 4 A MSE 165 A MSE 164 ? MET SELENOMETHIONINE 5 B MSE 2 B MSE 1 ? MET SELENOMETHIONINE 6 B MSE 55 B MSE 54 ? MET SELENOMETHIONINE 7 B MSE 63 B MSE 62 ? MET SELENOMETHIONINE 8 B MSE 165 B MSE 164 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3870 ? 1 MORE -52 ? 1 'SSA (A^2)' 15080 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-09-29 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2019-07-24 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Author supporting evidence' 4 3 'Structure model' 'Refinement description' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' 8 5 'Structure model' 'Database references' 9 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_struct_assembly_auth_evidence 2 3 'Structure model' software 3 4 'Structure model' software 4 4 'Structure model' struct_conn 5 5 'Structure model' database_2 6 5 'Structure model' struct_ref_seq_dif 7 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -10.3582 29.3934 19.7280 -0.0480 -0.0967 -0.0813 -0.0429 0.0045 -0.0061 1.9027 0.8751 1.4888 0.2042 0.7561 -0.0737 0.0458 -0.0316 -0.0143 -0.0338 -0.0071 -0.0195 0.0752 -0.0092 0.0476 'X-RAY DIFFRACTION' 2 ? refined -21.8095 20.9487 0.7447 -0.0163 -0.0412 -0.0810 -0.0488 -0.0084 -0.0249 1.8684 1.8865 1.0620 1.1484 0.2402 0.4242 -0.0567 0.0948 -0.0382 0.2928 -0.1175 -0.0345 -0.2018 0.0165 0.0118 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 0 A 168 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 B 0 B 168 ? . . . . ? # _phasing.method SAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0019 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SOLVE . ? program 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 SCALA 3.2.5 5/04/2004 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 5 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 7 # _pdbx_entry_details.entry_id 3JX9 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 141 ? ? CZ A ARG 141 ? ? NH1 A ARG 141 ? ? 125.01 120.30 4.71 0.50 N 2 1 NE A ARG 141 ? ? CZ A ARG 141 ? ? NH2 A ARG 141 ? ? 114.75 120.30 -5.55 0.50 N 3 1 NE B ARG 141 ? ? CZ B ARG 141 ? ? NH1 B ARG 141 ? ? 123.45 120.30 3.15 0.50 N 4 1 NE B ARG 141 ? ? CZ B ARG 141 ? ? NH2 B ARG 141 ? ? 117.27 120.30 -3.03 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 129 ? ? -142.30 53.92 2 1 GLU A 137 ? ? -24.11 -63.42 3 1 ARG B 64 ? B 89.65 -0.99 4 1 HIS B 71 ? ? 76.77 -8.94 5 1 PHE B 129 ? ? -144.48 53.70 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 3 ? NZ ? A LYS 4 NZ 2 1 Y 1 A LYS 63 ? CD ? A LYS 64 CD 3 1 Y 1 A LYS 63 ? CE ? A LYS 64 CE 4 1 Y 1 A LYS 63 ? NZ ? A LYS 64 NZ 5 1 Y 1 A LYS 69 ? CG ? A LYS 70 CG 6 1 Y 1 A LYS 69 ? CD ? A LYS 70 CD 7 1 Y 1 A LYS 69 ? CE ? A LYS 70 CE 8 1 Y 1 A LYS 69 ? NZ ? A LYS 70 NZ 9 1 Y 1 B LYS 3 ? CD ? B LYS 4 CD 10 1 Y 1 B LYS 3 ? CE ? B LYS 4 CE 11 1 Y 1 B LYS 3 ? NZ ? B LYS 4 NZ 12 1 Y 1 B LYS 63 ? CD ? B LYS 64 CD 13 1 Y 1 B LYS 63 ? CE ? B LYS 64 CE 14 1 Y 1 B LYS 63 ? NZ ? B LYS 64 NZ 15 1 Y 1 B LYS 69 ? CG ? B LYS 70 CG 16 1 Y 1 B LYS 69 ? CD ? B LYS 70 CD 17 1 Y 1 B LYS 69 ? CE ? B LYS 70 CE 18 1 Y 1 B LYS 69 ? NZ ? B LYS 70 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLU 169 ? A GLU 170 2 1 Y 1 B GLU 169 ? B GLU 170 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 GLYCEROL GOL 4 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #