data_3JZ2 # _entry.id 3JZ2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3JZ2 pdb_00003jz2 10.2210/pdb3jz2/pdb RCSB RCSB055339 ? ? WWPDB D_1000055339 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1SHH 'Slow form of thrombin bound with ppack' unspecified PDB 3BEI 'Crystal structure of the slow form of thrombin in a self-inhibited conformation' unspecified PDB 3JZ1 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3JZ2 _pdbx_database_status.recvd_initial_deposition_date 2009-09-22 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Niu, W.' 1 'Chen, Z.' 2 'Bush-Pelc, L.A.' 3 'Bah, A.' 4 'Gandhi, P.S.' 5 'Di Cera, E.' 6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Mutant N143P reveals how Na+ activates thrombin' J.Biol.Chem. 284 36175 36185 2009 JBCHA3 US 0021-9258 0071 ? 19846563 10.1074/jbc.M109.069500 1 'Structural identification of the pathway of long-range communication in an allosteric enzyme' Proc.Natl.Acad.Sci.USA 105 1832 ? 2009 PNASA6 US 0027-8424 0040 ? 18250335 ? 2 'Molecular dissection of Na+ binding to thrombin' J.Biol.Chem. 279 31842 ? 2004 JBCHA3 US 0021-9258 0071 ? 15152000 ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Niu, W.' 1 ? primary 'Chen, Z.' 2 ? primary 'Bush-Pelc, L.A.' 3 ? primary 'Bah, A.' 4 ? primary 'Gandhi, P.S.' 5 ? primary 'Di Cera, E.' 6 ? 1 'Gandhi, P.S.' 7 ? 1 'Chen, Z.' 8 ? 1 'Mathews, F.S.' 9 ? 1 'Di Cera, E.' 10 ? 2 'Pineda, A.O.' 11 ? 2 'Carrell, C.J.' 12 ? 2 'Bush, L.A.' 13 ? 2 'Prasad, S.' 14 ? 2 'Caccia, S.' 15 ? 2 'Chen, Z.' 16 ? 2 'Mathews, F.S.' 17 ? 2 'Di Cera, E.' 18 ? # _cell.entry_id 3JZ2 _cell.length_a 57.890 _cell.length_b 57.890 _cell.length_c 119.770 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3JZ2 _symmetry.space_group_name_H-M 'P 43' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Thrombin light chain' 4096.534 1 3.4.21.5 N143P ? ? 2 polymer man 'Thrombin heavy chain' 29763.234 1 3.4.21.5 ? ? ? 3 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 4 ? ? ? ? 5 water nat water 18.015 116 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR A ? 2 'polypeptide(L)' no no ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGPLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGPLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 PHE n 1 3 GLY n 1 4 SER n 1 5 GLY n 1 6 GLU n 1 7 ALA n 1 8 ASP n 1 9 CYS n 1 10 GLY n 1 11 LEU n 1 12 ARG n 1 13 PRO n 1 14 LEU n 1 15 PHE n 1 16 GLU n 1 17 LYS n 1 18 LYS n 1 19 SER n 1 20 LEU n 1 21 GLU n 1 22 ASP n 1 23 LYS n 1 24 THR n 1 25 GLU n 1 26 ARG n 1 27 GLU n 1 28 LEU n 1 29 LEU n 1 30 GLU n 1 31 SER n 1 32 TYR n 1 33 ILE n 1 34 ASP n 1 35 GLY n 1 36 ARG n 2 1 ILE n 2 2 VAL n 2 3 GLU n 2 4 GLY n 2 5 SER n 2 6 ASP n 2 7 ALA n 2 8 GLU n 2 9 ILE n 2 10 GLY n 2 11 MET n 2 12 SER n 2 13 PRO n 2 14 TRP n 2 15 GLN n 2 16 VAL n 2 17 MET n 2 18 LEU n 2 19 PHE n 2 20 ARG n 2 21 LYS n 2 22 SER n 2 23 PRO n 2 24 GLN n 2 25 GLU n 2 26 LEU n 2 27 LEU n 2 28 CYS n 2 29 GLY n 2 30 ALA n 2 31 SER n 2 32 LEU n 2 33 ILE n 2 34 SER n 2 35 ASP n 2 36 ARG n 2 37 TRP n 2 38 VAL n 2 39 LEU n 2 40 THR n 2 41 ALA n 2 42 ALA n 2 43 HIS n 2 44 CYS n 2 45 LEU n 2 46 LEU n 2 47 TYR n 2 48 PRO n 2 49 PRO n 2 50 TRP n 2 51 ASP n 2 52 LYS n 2 53 ASN n 2 54 PHE n 2 55 THR n 2 56 GLU n 2 57 ASN n 2 58 ASP n 2 59 LEU n 2 60 LEU n 2 61 VAL n 2 62 ARG n 2 63 ILE n 2 64 GLY n 2 65 LYS n 2 66 HIS n 2 67 SER n 2 68 ARG n 2 69 THR n 2 70 ARG n 2 71 TYR n 2 72 GLU n 2 73 ARG n 2 74 ASN n 2 75 ILE n 2 76 GLU n 2 77 LYS n 2 78 ILE n 2 79 SER n 2 80 MET n 2 81 LEU n 2 82 GLU n 2 83 LYS n 2 84 ILE n 2 85 TYR n 2 86 ILE n 2 87 HIS n 2 88 PRO n 2 89 ARG n 2 90 TYR n 2 91 ASN n 2 92 TRP n 2 93 ARG n 2 94 GLU n 2 95 ASN n 2 96 LEU n 2 97 ASP n 2 98 ARG n 2 99 ASP n 2 100 ILE n 2 101 ALA n 2 102 LEU n 2 103 MET n 2 104 LYS n 2 105 LEU n 2 106 LYS n 2 107 LYS n 2 108 PRO n 2 109 VAL n 2 110 ALA n 2 111 PHE n 2 112 SER n 2 113 ASP n 2 114 TYR n 2 115 ILE n 2 116 HIS n 2 117 PRO n 2 118 VAL n 2 119 CYS n 2 120 LEU n 2 121 PRO n 2 122 ASP n 2 123 ARG n 2 124 GLU n 2 125 THR n 2 126 ALA n 2 127 ALA n 2 128 SER n 2 129 LEU n 2 130 LEU n 2 131 GLN n 2 132 ALA n 2 133 GLY n 2 134 TYR n 2 135 LYS n 2 136 GLY n 2 137 ARG n 2 138 VAL n 2 139 THR n 2 140 GLY n 2 141 TRP n 2 142 GLY n 2 143 PRO n 2 144 LEU n 2 145 LYS n 2 146 GLU n 2 147 THR n 2 148 TRP n 2 149 THR n 2 150 ALA n 2 151 ASN n 2 152 VAL n 2 153 GLY n 2 154 LYS n 2 155 GLY n 2 156 GLN n 2 157 PRO n 2 158 SER n 2 159 VAL n 2 160 LEU n 2 161 GLN n 2 162 VAL n 2 163 VAL n 2 164 ASN n 2 165 LEU n 2 166 PRO n 2 167 ILE n 2 168 VAL n 2 169 GLU n 2 170 ARG n 2 171 PRO n 2 172 VAL n 2 173 CYS n 2 174 LYS n 2 175 ASP n 2 176 SER n 2 177 THR n 2 178 ARG n 2 179 ILE n 2 180 ARG n 2 181 ILE n 2 182 THR n 2 183 ASP n 2 184 ASN n 2 185 MET n 2 186 PHE n 2 187 CYS n 2 188 ALA n 2 189 GLY n 2 190 TYR n 2 191 LYS n 2 192 PRO n 2 193 ASP n 2 194 GLU n 2 195 GLY n 2 196 LYS n 2 197 ARG n 2 198 GLY n 2 199 ASP n 2 200 ALA n 2 201 CYS n 2 202 GLU n 2 203 GLY n 2 204 ASP n 2 205 SER n 2 206 GLY n 2 207 GLY n 2 208 PRO n 2 209 PHE n 2 210 VAL n 2 211 MET n 2 212 LYS n 2 213 SER n 2 214 PRO n 2 215 PHE n 2 216 ASN n 2 217 ASN n 2 218 ARG n 2 219 TRP n 2 220 TYR n 2 221 GLN n 2 222 MET n 2 223 GLY n 2 224 ILE n 2 225 VAL n 2 226 SER n 2 227 TRP n 2 228 GLY n 2 229 GLU n 2 230 GLY n 2 231 CYS n 2 232 ASP n 2 233 ARG n 2 234 ASP n 2 235 GLY n 2 236 LYS n 2 237 TYR n 2 238 GLY n 2 239 PHE n 2 240 TYR n 2 241 THR n 2 242 HIS n 2 243 VAL n 2 244 PHE n 2 245 ARG n 2 246 LEU n 2 247 LYS n 2 248 LYS n 2 249 TRP n 2 250 ILE n 2 251 GLN n 2 252 LYS n 2 253 VAL n 2 254 ILE n 2 255 ASP n 2 256 GLN n 2 257 PHE n 2 258 GLY n 2 259 GLU n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? human ? F2 ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? 'Chinese hamster' 'Cricetulus griseus' 10029 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? human ? F2 ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? 'Chinese hamster' 'Cricetulus griseus' 10029 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP THRB_HUMAN P00734 1 TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR 328 ? 2 UNP THRB_HUMAN P00734 2 ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; 364 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3JZ2 A 1 ? 36 ? P00734 328 ? 363 ? -3 15 2 2 3JZ2 B 1 ? 259 ? P00734 364 ? 622 ? 16 247 # _struct_ref_seq_dif.align_id 2 _struct_ref_seq_dif.pdbx_pdb_id_code 3JZ2 _struct_ref_seq_dif.mon_id PRO _struct_ref_seq_dif.pdbx_pdb_strand_id B _struct_ref_seq_dif.seq_num 143 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P00734 _struct_ref_seq_dif.db_mon_id ASN _struct_ref_seq_dif.pdbx_seq_db_seq_num 506 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 143 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3JZ2 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.96 _exptl_crystal.density_percent_sol 58.50 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_details '0.1M imidazole and 7% PEG 8000, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 345 mm plate' _diffrn_detector.pdbx_collection_date 2009-08-16 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator mirror _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'SEALED TUBE' _diffrn_source.type OTHER _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54 # _reflns.entry_id 3JZ2 _reflns.observed_criterion_sigma_I -1.0 _reflns.observed_criterion_sigma_F -1 _reflns.d_resolution_low 40 _reflns.d_resolution_high 2.4 _reflns.number_obs 14942 _reflns.number_all 15452 _reflns.percent_possible_obs 96.7 _reflns.pdbx_Rmerge_I_obs 0.076 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 19.0 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.4 _reflns_shell.d_res_low 2.44 _reflns_shell.percent_possible_all 77.8 _reflns_shell.Rmerge_I_obs 0.408 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.2 _reflns_shell.pdbx_redundancy 2.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 595 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3JZ2 _refine.ls_number_reflns_obs 14167 _refine.ls_number_reflns_all 14629 _refine.pdbx_ls_sigma_I -3 _refine.pdbx_ls_sigma_F -3 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 25.30 _refine.ls_d_res_high 2.40 _refine.ls_percent_reflns_obs 96.84 _refine.ls_R_factor_obs 0.19194 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18906 _refine.ls_R_factor_R_free 0.24649 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 747 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.945 _refine.correlation_coeff_Fo_to_Fc_free 0.911 _refine.B_iso_mean 33.721 _refine.aniso_B[1][1] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PEB entry 3BEI' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model Isotropic _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.338 _refine.pdbx_overall_ESU_R_Free 0.250 _refine.overall_SU_ML 0.171 _refine.overall_SU_B 15.999 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2234 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 38 _refine_hist.number_atoms_solvent 116 _refine_hist.number_atoms_total 2388 _refine_hist.d_res_high 2.40 _refine_hist.d_res_low 25.30 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.012 0.022 ? 2318 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.431 1.976 ? 3122 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.566 5.000 ? 270 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 34.677 23.148 ? 108 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.764 15.000 ? 406 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 16.319 15.000 ? 20 'X-RAY DIFFRACTION' ? r_chiral_restr 0.096 0.200 ? 324 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.021 ? 1754 'X-RAY DIFFRACTION' ? r_mcbond_it 0.657 1.500 ? 1364 'X-RAY DIFFRACTION' ? r_mcangle_it 1.251 2.000 ? 2197 'X-RAY DIFFRACTION' ? r_scbond_it 1.782 3.000 ? 954 'X-RAY DIFFRACTION' ? r_scangle_it 2.949 4.500 ? 925 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.401 _refine_ls_shell.d_res_low 2.463 _refine_ls_shell.number_reflns_R_work 851 _refine_ls_shell.R_factor_R_work 0.300 _refine_ls_shell.percent_reflns_obs 78.93 _refine_ls_shell.R_factor_R_free 0.438 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 48 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3JZ2 _struct.title 'Crystal structure of human thrombin mutant N143P in E* form' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3JZ2 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text ;Serine protease, Acute phase, Blood coagulation, Cleavage on pair of basic residues, Disease mutation, Disulfide bond, Gamma-carboxyglutamic acid, Glycoprotein, Hydrolase, Kringle, Protease, Secreted, Zymogen ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 5 ? I N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PHE A 15 ? SER A 19 ? PHE A 7 SER A 11 5 ? 5 HELX_P HELX_P2 2 THR A 24 B TYR A 32 J THR A 14 TYR A 14 1 ? 9 HELX_P HELX_P3 3 ALA B 41 ? CYS B 44 ? ALA B 55 CYS B 58 5 ? 4 HELX_P HELX_P4 4 PRO B 48 B ASP B 51 E PRO B 60 ASP B 60 5 ? 4 HELX_P HELX_P5 5 THR B 55 I ASN B 57 ? THR B 60 ASN B 62 5 ? 3 HELX_P HELX_P6 6 ASP B 122 ? LEU B 130 ? ASP B 125 LEU B 130 1 ? 9 HELX_P HELX_P7 7 GLU B 169 ? SER B 176 ? GLU B 164 SER B 171 1 ? 8 HELX_P HELX_P8 8 CYS B 201 ? SER B 205 ? CYS B 191 SER B 195 5 ? 5 HELX_P HELX_P9 9 LEU B 246 ? PHE B 257 ? LEU B 234 PHE B 245 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 9 SG ? ? ? 1_555 B CYS 119 SG ? ? A CYS 1 B CYS 122 1_555 ? ? ? ? ? ? ? 2.021 ? ? disulf2 disulf ? ? B CYS 28 SG ? ? ? 1_555 B CYS 44 SG ? ? B CYS 42 B CYS 58 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf3 disulf ? ? B CYS 173 SG ? ? ? 1_555 B CYS 187 SG ? ? B CYS 168 B CYS 182 1_555 ? ? ? ? ? ? ? 2.027 ? ? disulf4 disulf ? ? B CYS 201 SG ? ? ? 1_555 B CYS 231 SG ? ? B CYS 191 B CYS 220 1_555 ? ? ? ? ? ? ? 2.039 ? ? covale1 covale one ? B ASN 53 ND2 ? G ? 1_555 C NAG . C1 ? ? B ASN 60 B NAG 301 1_555 ? ? ? ? ? ? ? 1.444 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 22 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code A _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 36 _struct_mon_prot_cis.auth_asym_id B _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 23 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 37 _struct_mon_prot_cis.pdbx_auth_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -7.61 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 7 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER B 5 ? ASP B 6 ? SER B 20 ASP B 21 A 2 GLN B 161 ? PRO B 166 ? GLN B 156 PRO B 161 A 3 LYS B 135 ? GLY B 140 ? LYS B 135 GLY B 140 A 4 PRO B 208 ? LYS B 212 ? PRO B 198 LYS B 202 A 5 TRP B 219 ? VAL B 225 ? TRP B 207 VAL B 213 A 6 GLY B 238 ? HIS B 242 ? GLY B 226 HIS B 230 A 7 MET B 185 ? ALA B 188 ? MET B 180 ALA B 183 B 1 GLN B 15 ? ARG B 20 ? GLN B 30 ARG B 35 B 2 GLU B 25 ? LEU B 32 ? GLU B 39 LEU B 46 B 3 TRP B 37 ? THR B 40 ? TRP B 51 THR B 54 B 4 ALA B 101 ? LEU B 105 ? ALA B 104 LEU B 108 B 5 LYS B 77 ? ILE B 86 ? LYS B 81 ILE B 90 B 6 LEU B 59 ? ILE B 63 ? LEU B 64 ILE B 68 B 7 GLN B 15 ? ARG B 20 ? GLN B 30 ARG B 35 C 1 LEU B 46 ? TYR B 47 A LEU B 60 TYR B 60 C 2 LYS B 52 F ASN B 53 G LYS B 60 ASN B 60 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER B 5 ? N SER B 20 O VAL B 162 ? O VAL B 157 A 2 3 O VAL B 163 ? O VAL B 158 N VAL B 138 ? N VAL B 138 A 3 4 N ARG B 137 ? N ARG B 137 O VAL B 210 ? O VAL B 200 A 4 5 N PHE B 209 ? N PHE B 199 O GLY B 223 ? O GLY B 211 A 5 6 N ILE B 224 ? N ILE B 212 O THR B 241 ? O THR B 229 A 6 7 O TYR B 240 ? O TYR B 228 N PHE B 186 ? N PHE B 181 B 1 2 N LEU B 18 ? N LEU B 33 O LEU B 27 ? O LEU B 41 B 2 3 N SER B 31 ? N SER B 45 O LEU B 39 ? O LEU B 53 B 3 4 N VAL B 38 ? N VAL B 52 O MET B 103 ? O MET B 106 B 4 5 O LYS B 104 ? O LYS B 107 N GLU B 82 ? N GLU B 86 B 5 6 O LYS B 77 ? O LYS B 81 N ILE B 63 ? N ILE B 68 B 6 7 O LEU B 60 ? O LEU B 65 N PHE B 19 ? N PHE B 34 C 1 2 N TYR B 47 A N TYR B 60 O LYS B 52 F O LYS B 60 # _database_PDB_matrix.entry_id 3JZ2 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3JZ2 _atom_sites.fract_transf_matrix[1][1] 0.017274 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017274 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008349 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 -3 ? ? ? A . n A 1 2 PHE 2 -2 ? ? ? A . n A 1 3 GLY 3 -1 ? ? ? A . n A 1 4 SER 4 0 ? ? ? A . n A 1 5 GLY 5 1 1 GLY GLY A D n A 1 6 GLU 6 1 1 GLU GLU A C n A 1 7 ALA 7 1 1 ALA ALA A B n A 1 8 ASP 8 1 1 ASP ASP A A n A 1 9 CYS 9 1 1 CYS CYS A . n A 1 10 GLY 10 2 2 GLY GLY A . n A 1 11 LEU 11 3 3 LEU LEU A . n A 1 12 ARG 12 4 4 ARG ARG A . n A 1 13 PRO 13 5 5 PRO PRO A . n A 1 14 LEU 14 6 6 LEU LEU A . n A 1 15 PHE 15 7 7 PHE PHE A . n A 1 16 GLU 16 8 8 GLU GLU A . n A 1 17 LYS 17 9 9 LYS LYS A . n A 1 18 LYS 18 10 10 LYS LYS A . n A 1 19 SER 19 11 11 SER SER A . n A 1 20 LEU 20 12 12 LEU LEU A . n A 1 21 GLU 21 13 13 GLU GLU A . n A 1 22 ASP 22 14 14 ASP ASP A . n A 1 23 LYS 23 14 14 LYS LYS A A n A 1 24 THR 24 14 14 THR THR A B n A 1 25 GLU 25 14 14 GLU GLU A C n A 1 26 ARG 26 14 14 ARG ARG A D n A 1 27 GLU 27 14 14 GLU GLU A E n A 1 28 LEU 28 14 14 LEU LEU A F n A 1 29 LEU 29 14 14 LEU LEU A G n A 1 30 GLU 30 14 14 GLU GLU A H n A 1 31 SER 31 14 14 SER SER A I n A 1 32 TYR 32 14 14 TYR TYR A J n A 1 33 ILE 33 14 14 ILE ILE A K n A 1 34 ASP 34 14 ? ? ? A L n A 1 35 GLY 35 14 ? ? ? A M n A 1 36 ARG 36 15 ? ? ? A . n B 2 1 ILE 1 16 16 ILE ILE B . n B 2 2 VAL 2 17 17 VAL VAL B . n B 2 3 GLU 3 18 18 GLU GLU B . n B 2 4 GLY 4 19 19 GLY GLY B . n B 2 5 SER 5 20 20 SER SER B . n B 2 6 ASP 6 21 21 ASP ASP B . n B 2 7 ALA 7 22 22 ALA ALA B . n B 2 8 GLU 8 23 23 GLU GLU B . n B 2 9 ILE 9 24 24 ILE ILE B . n B 2 10 GLY 10 25 25 GLY GLY B . n B 2 11 MET 11 26 26 MET MET B . n B 2 12 SER 12 27 27 SER SER B . n B 2 13 PRO 13 28 28 PRO PRO B . n B 2 14 TRP 14 29 29 TRP TRP B . n B 2 15 GLN 15 30 30 GLN GLN B . n B 2 16 VAL 16 31 31 VAL VAL B . n B 2 17 MET 17 32 32 MET MET B . n B 2 18 LEU 18 33 33 LEU LEU B . n B 2 19 PHE 19 34 34 PHE PHE B . n B 2 20 ARG 20 35 35 ARG ARG B . n B 2 21 LYS 21 36 36 LYS LYS B . n B 2 22 SER 22 36 36 SER SER B A n B 2 23 PRO 23 37 37 PRO PRO B . n B 2 24 GLN 24 38 38 GLN GLN B . n B 2 25 GLU 25 39 39 GLU GLU B . n B 2 26 LEU 26 40 40 LEU LEU B . n B 2 27 LEU 27 41 41 LEU LEU B . n B 2 28 CYS 28 42 42 CYS CYS B . n B 2 29 GLY 29 43 43 GLY GLY B . n B 2 30 ALA 30 44 44 ALA ALA B . n B 2 31 SER 31 45 45 SER SER B . n B 2 32 LEU 32 46 46 LEU LEU B . n B 2 33 ILE 33 47 47 ILE ILE B . n B 2 34 SER 34 48 48 SER SER B . n B 2 35 ASP 35 49 49 ASP ASP B . n B 2 36 ARG 36 50 50 ARG ARG B . n B 2 37 TRP 37 51 51 TRP TRP B . n B 2 38 VAL 38 52 52 VAL VAL B . n B 2 39 LEU 39 53 53 LEU LEU B . n B 2 40 THR 40 54 54 THR THR B . n B 2 41 ALA 41 55 55 ALA ALA B . n B 2 42 ALA 42 56 56 ALA ALA B . n B 2 43 HIS 43 57 57 HIS HIS B . n B 2 44 CYS 44 58 58 CYS CYS B . n B 2 45 LEU 45 59 59 LEU LEU B . n B 2 46 LEU 46 60 60 LEU LEU B . n B 2 47 TYR 47 60 60 TYR TYR B A n B 2 48 PRO 48 60 60 PRO PRO B B n B 2 49 PRO 49 60 60 PRO PRO B C n B 2 50 TRP 50 60 60 TRP TRP B D n B 2 51 ASP 51 60 60 ASP ASP B E n B 2 52 LYS 52 60 60 LYS LYS B F n B 2 53 ASN 53 60 60 ASN ASN B G n B 2 54 PHE 54 60 60 PHE PHE B H n B 2 55 THR 55 60 60 THR THR B I n B 2 56 GLU 56 61 61 GLU GLU B . n B 2 57 ASN 57 62 62 ASN ASN B . n B 2 58 ASP 58 63 63 ASP ASP B . n B 2 59 LEU 59 64 64 LEU LEU B . n B 2 60 LEU 60 65 65 LEU LEU B . n B 2 61 VAL 61 66 66 VAL VAL B . n B 2 62 ARG 62 67 67 ARG ARG B . n B 2 63 ILE 63 68 68 ILE ILE B . n B 2 64 GLY 64 69 69 GLY GLY B . n B 2 65 LYS 65 70 70 LYS LYS B . n B 2 66 HIS 66 71 71 HIS HIS B . n B 2 67 SER 67 72 72 SER SER B . n B 2 68 ARG 68 73 73 ARG ARG B . n B 2 69 THR 69 74 74 THR THR B . n B 2 70 ARG 70 75 75 ARG ARG B . n B 2 71 TYR 71 76 76 TYR TYR B . n B 2 72 GLU 72 77 77 GLU GLU B . n B 2 73 ARG 73 77 77 ARG ARG B A n B 2 74 ASN 74 78 78 ASN ASN B . n B 2 75 ILE 75 79 79 ILE ILE B . n B 2 76 GLU 76 80 80 GLU GLU B . n B 2 77 LYS 77 81 81 LYS LYS B . n B 2 78 ILE 78 82 82 ILE ILE B . n B 2 79 SER 79 83 83 SER SER B . n B 2 80 MET 80 84 84 MET MET B . n B 2 81 LEU 81 85 85 LEU LEU B . n B 2 82 GLU 82 86 86 GLU GLU B . n B 2 83 LYS 83 87 87 LYS LYS B . n B 2 84 ILE 84 88 88 ILE ILE B . n B 2 85 TYR 85 89 89 TYR TYR B . n B 2 86 ILE 86 90 90 ILE ILE B . n B 2 87 HIS 87 91 91 HIS HIS B . n B 2 88 PRO 88 92 92 PRO PRO B . n B 2 89 ARG 89 93 93 ARG ARG B . n B 2 90 TYR 90 94 94 TYR TYR B . n B 2 91 ASN 91 95 95 ASN ASN B . n B 2 92 TRP 92 96 96 TRP TRP B . n B 2 93 ARG 93 97 97 ARG ARG B . n B 2 94 GLU 94 97 97 GLU GLU B A n B 2 95 ASN 95 98 98 ASN ASN B . n B 2 96 LEU 96 99 99 LEU LEU B . n B 2 97 ASP 97 100 100 ASP ASP B . n B 2 98 ARG 98 101 101 ARG ARG B . n B 2 99 ASP 99 102 102 ASP ASP B . n B 2 100 ILE 100 103 103 ILE ILE B . n B 2 101 ALA 101 104 104 ALA ALA B . n B 2 102 LEU 102 105 105 LEU LEU B . n B 2 103 MET 103 106 106 MET MET B . n B 2 104 LYS 104 107 107 LYS LYS B . n B 2 105 LEU 105 108 108 LEU LEU B . n B 2 106 LYS 106 109 109 LYS LYS B . n B 2 107 LYS 107 110 110 LYS LYS B . n B 2 108 PRO 108 111 111 PRO PRO B . n B 2 109 VAL 109 112 112 VAL VAL B . n B 2 110 ALA 110 113 113 ALA ALA B . n B 2 111 PHE 111 114 114 PHE PHE B . n B 2 112 SER 112 115 115 SER SER B . n B 2 113 ASP 113 116 116 ASP ASP B . n B 2 114 TYR 114 117 117 TYR TYR B . n B 2 115 ILE 115 118 118 ILE ILE B . n B 2 116 HIS 116 119 119 HIS HIS B . n B 2 117 PRO 117 120 120 PRO PRO B . n B 2 118 VAL 118 121 121 VAL VAL B . n B 2 119 CYS 119 122 122 CYS CYS B . n B 2 120 LEU 120 123 123 LEU LEU B . n B 2 121 PRO 121 124 124 PRO PRO B . n B 2 122 ASP 122 125 125 ASP ASP B . n B 2 123 ARG 123 126 126 ARG ARG B . n B 2 124 GLU 124 127 127 GLU GLU B . n B 2 125 THR 125 128 128 THR THR B . n B 2 126 ALA 126 129 129 ALA ALA B . n B 2 127 ALA 127 129 129 ALA ALA B A n B 2 128 SER 128 129 129 SER SER B B n B 2 129 LEU 129 129 129 LEU LEU B C n B 2 130 LEU 130 130 130 LEU LEU B . n B 2 131 GLN 131 131 131 GLN GLN B . n B 2 132 ALA 132 132 132 ALA ALA B . n B 2 133 GLY 133 133 133 GLY GLY B . n B 2 134 TYR 134 134 134 TYR TYR B . n B 2 135 LYS 135 135 135 LYS LYS B . n B 2 136 GLY 136 136 136 GLY GLY B . n B 2 137 ARG 137 137 137 ARG ARG B . n B 2 138 VAL 138 138 138 VAL VAL B . n B 2 139 THR 139 139 139 THR THR B . n B 2 140 GLY 140 140 140 GLY GLY B . n B 2 141 TRP 141 141 141 TRP TRP B . n B 2 142 GLY 142 142 142 GLY GLY B . n B 2 143 PRO 143 143 143 PRO PRO B . n B 2 144 LEU 144 144 144 LEU LEU B . n B 2 145 LYS 145 145 ? ? ? B . n B 2 146 GLU 146 146 ? ? ? B . n B 2 147 THR 147 147 ? ? ? B . n B 2 148 TRP 148 148 ? ? ? B . n B 2 149 THR 149 149 ? ? ? B . n B 2 150 ALA 150 149 ? ? ? B A n B 2 151 ASN 151 149 ? ? ? B B n B 2 152 VAL 152 149 ? ? ? B C n B 2 153 GLY 153 149 ? ? ? B D n B 2 154 LYS 154 149 ? ? ? B E n B 2 155 GLY 155 150 150 GLY GLY B . n B 2 156 GLN 156 151 151 GLN GLN B . n B 2 157 PRO 157 152 152 PRO PRO B . n B 2 158 SER 158 153 153 SER SER B . n B 2 159 VAL 159 154 154 VAL VAL B . n B 2 160 LEU 160 155 155 LEU LEU B . n B 2 161 GLN 161 156 156 GLN GLN B . n B 2 162 VAL 162 157 157 VAL VAL B . n B 2 163 VAL 163 158 158 VAL VAL B . n B 2 164 ASN 164 159 159 ASN ASN B . n B 2 165 LEU 165 160 160 LEU LEU B . n B 2 166 PRO 166 161 161 PRO PRO B . n B 2 167 ILE 167 162 162 ILE ILE B . n B 2 168 VAL 168 163 163 VAL VAL B . n B 2 169 GLU 169 164 164 GLU GLU B . n B 2 170 ARG 170 165 165 ARG ARG B . n B 2 171 PRO 171 166 166 PRO PRO B . n B 2 172 VAL 172 167 167 VAL VAL B . n B 2 173 CYS 173 168 168 CYS CYS B . n B 2 174 LYS 174 169 169 LYS LYS B . n B 2 175 ASP 175 170 170 ASP ASP B . n B 2 176 SER 176 171 171 SER SER B . n B 2 177 THR 177 172 172 THR THR B . n B 2 178 ARG 178 173 173 ARG ARG B . n B 2 179 ILE 179 174 174 ILE ILE B . n B 2 180 ARG 180 175 175 ARG ARG B . n B 2 181 ILE 181 176 176 ILE ILE B . n B 2 182 THR 182 177 177 THR THR B . n B 2 183 ASP 183 178 178 ASP ASP B . n B 2 184 ASN 184 179 179 ASN ASN B . n B 2 185 MET 185 180 180 MET MET B . n B 2 186 PHE 186 181 181 PHE PHE B . n B 2 187 CYS 187 182 182 CYS CYS B . n B 2 188 ALA 188 183 183 ALA ALA B . n B 2 189 GLY 189 184 184 GLY GLY B . n B 2 190 TYR 190 184 184 TYR TYR B A n B 2 191 LYS 191 185 185 LYS LYS B . n B 2 192 PRO 192 186 186 PRO PRO B . n B 2 193 ASP 193 186 186 ASP ASP B A n B 2 194 GLU 194 186 186 GLU GLU B B n B 2 195 GLY 195 186 186 GLY GLY B C n B 2 196 LYS 196 186 186 LYS LYS B D n B 2 197 ARG 197 187 187 ARG ARG B . n B 2 198 GLY 198 188 188 GLY GLY B . n B 2 199 ASP 199 189 189 ASP ASP B . n B 2 200 ALA 200 190 190 ALA ALA B . n B 2 201 CYS 201 191 191 CYS CYS B . n B 2 202 GLU 202 192 192 GLU GLU B . n B 2 203 GLY 203 193 193 GLY GLY B . n B 2 204 ASP 204 194 194 ASP ASP B . n B 2 205 SER 205 195 195 SER SER B . n B 2 206 GLY 206 196 196 GLY GLY B . n B 2 207 GLY 207 197 197 GLY GLY B . n B 2 208 PRO 208 198 198 PRO PRO B . n B 2 209 PHE 209 199 199 PHE PHE B . n B 2 210 VAL 210 200 200 VAL VAL B . n B 2 211 MET 211 201 201 MET MET B . n B 2 212 LYS 212 202 202 LYS LYS B . n B 2 213 SER 213 203 203 SER SER B . n B 2 214 PRO 214 204 204 PRO PRO B . n B 2 215 PHE 215 204 204 PHE PHE B A n B 2 216 ASN 216 204 204 ASN ASN B B n B 2 217 ASN 217 205 205 ASN ASN B . n B 2 218 ARG 218 206 206 ARG ARG B . n B 2 219 TRP 219 207 207 TRP TRP B . n B 2 220 TYR 220 208 208 TYR TYR B . n B 2 221 GLN 221 209 209 GLN GLN B . n B 2 222 MET 222 210 210 MET MET B . n B 2 223 GLY 223 211 211 GLY GLY B . n B 2 224 ILE 224 212 212 ILE ILE B . n B 2 225 VAL 225 213 213 VAL VAL B . n B 2 226 SER 226 214 214 SER SER B . n B 2 227 TRP 227 215 215 TRP TRP B . n B 2 228 GLY 228 216 216 GLY GLY B . n B 2 229 GLU 229 217 217 GLU GLU B . n B 2 230 GLY 230 219 219 GLY GLY B . n B 2 231 CYS 231 220 220 CYS CYS B . n B 2 232 ASP 232 221 221 ASP ASP B . n B 2 233 ARG 233 221 221 ARG ARG B A n B 2 234 ASP 234 222 222 ASP ASP B . n B 2 235 GLY 235 223 223 GLY GLY B . n B 2 236 LYS 236 224 224 LYS LYS B . n B 2 237 TYR 237 225 225 TYR TYR B . n B 2 238 GLY 238 226 226 GLY GLY B . n B 2 239 PHE 239 227 227 PHE PHE B . n B 2 240 TYR 240 228 228 TYR TYR B . n B 2 241 THR 241 229 229 THR THR B . n B 2 242 HIS 242 230 230 HIS HIS B . n B 2 243 VAL 243 231 231 VAL VAL B . n B 2 244 PHE 244 232 232 PHE PHE B . n B 2 245 ARG 245 233 233 ARG ARG B . n B 2 246 LEU 246 234 234 LEU LEU B . n B 2 247 LYS 247 235 235 LYS LYS B . n B 2 248 LYS 248 236 236 LYS LYS B . n B 2 249 TRP 249 237 237 TRP TRP B . n B 2 250 ILE 250 238 238 ILE ILE B . n B 2 251 GLN 251 239 239 GLN GLN B . n B 2 252 LYS 252 240 240 LYS LYS B . n B 2 253 VAL 253 241 241 VAL VAL B . n B 2 254 ILE 254 242 242 ILE ILE B . n B 2 255 ASP 255 243 243 ASP ASP B . n B 2 256 GLN 256 244 244 GLN GLN B . n B 2 257 PHE 257 245 245 PHE PHE B . n B 2 258 GLY 258 246 ? ? ? B . n B 2 259 GLU 259 247 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NAG 1 301 301 NAG NAG B . D 4 GOL 1 401 401 GOL GOL B . E 4 GOL 1 402 402 GOL GOL B . F 4 GOL 1 403 403 GOL GOL B . G 4 GOL 1 404 404 GOL GOL B . H 5 HOH 1 1006 1006 HOH HOH A . H 5 HOH 2 1010 1010 HOH HOH A . H 5 HOH 3 1034 1034 HOH HOH A . H 5 HOH 4 1037 1037 HOH HOH A . H 5 HOH 5 1038 1038 HOH HOH A . H 5 HOH 6 1043 1043 HOH HOH A . H 5 HOH 7 1045 1045 HOH HOH A . H 5 HOH 8 1054 1054 HOH HOH A . H 5 HOH 9 1055 1055 HOH HOH A . H 5 HOH 10 1065 1065 HOH HOH A . H 5 HOH 11 1089 1089 HOH HOH A . H 5 HOH 12 1099 1099 HOH HOH A . H 5 HOH 13 1106 1106 HOH HOH A . H 5 HOH 14 1107 1107 HOH HOH A . I 5 HOH 1 1001 1001 HOH HOH B . I 5 HOH 2 1002 1002 HOH HOH B . I 5 HOH 3 1003 1003 HOH HOH B . I 5 HOH 4 1004 1004 HOH HOH B . I 5 HOH 5 1005 1005 HOH HOH B . I 5 HOH 6 1007 1007 HOH HOH B . I 5 HOH 7 1008 1008 HOH HOH B . I 5 HOH 8 1009 1009 HOH HOH B . I 5 HOH 9 1011 1011 HOH HOH B . I 5 HOH 10 1012 1012 HOH HOH B . I 5 HOH 11 1013 1013 HOH HOH B . I 5 HOH 12 1014 1014 HOH HOH B . I 5 HOH 13 1015 1015 HOH HOH B . I 5 HOH 14 1016 1016 HOH HOH B . I 5 HOH 15 1017 1017 HOH HOH B . I 5 HOH 16 1018 1018 HOH HOH B . I 5 HOH 17 1019 1019 HOH HOH B . I 5 HOH 18 1020 1020 HOH HOH B . I 5 HOH 19 1021 1021 HOH HOH B . I 5 HOH 20 1022 1022 HOH HOH B . I 5 HOH 21 1023 1023 HOH HOH B . I 5 HOH 22 1024 1024 HOH HOH B . I 5 HOH 23 1025 1025 HOH HOH B . I 5 HOH 24 1026 1026 HOH HOH B . I 5 HOH 25 1027 1027 HOH HOH B . I 5 HOH 26 1028 1028 HOH HOH B . I 5 HOH 27 1029 1029 HOH HOH B . I 5 HOH 28 1030 1030 HOH HOH B . I 5 HOH 29 1031 1031 HOH HOH B . I 5 HOH 30 1032 1032 HOH HOH B . I 5 HOH 31 1033 1033 HOH HOH B . I 5 HOH 32 1035 1035 HOH HOH B . I 5 HOH 33 1036 1036 HOH HOH B . I 5 HOH 34 1039 1039 HOH HOH B . I 5 HOH 35 1040 1040 HOH HOH B . I 5 HOH 36 1041 1041 HOH HOH B . I 5 HOH 37 1042 1042 HOH HOH B . I 5 HOH 38 1044 1044 HOH HOH B . I 5 HOH 39 1046 1046 HOH HOH B . I 5 HOH 40 1047 1047 HOH HOH B . I 5 HOH 41 1048 1048 HOH HOH B . I 5 HOH 42 1049 1049 HOH HOH B . I 5 HOH 43 1050 1050 HOH HOH B . I 5 HOH 44 1051 1051 HOH HOH B . I 5 HOH 45 1052 1052 HOH HOH B . I 5 HOH 46 1053 1053 HOH HOH B . I 5 HOH 47 1056 1056 HOH HOH B . I 5 HOH 48 1057 1057 HOH HOH B . I 5 HOH 49 1058 1058 HOH HOH B . I 5 HOH 50 1059 1059 HOH HOH B . I 5 HOH 51 1060 1060 HOH HOH B . I 5 HOH 52 1061 1061 HOH HOH B . I 5 HOH 53 1062 1062 HOH HOH B . I 5 HOH 54 1063 1063 HOH HOH B . I 5 HOH 55 1064 1064 HOH HOH B . I 5 HOH 56 1066 1066 HOH HOH B . I 5 HOH 57 1067 1067 HOH HOH B . I 5 HOH 58 1068 1068 HOH HOH B . I 5 HOH 59 1069 1069 HOH HOH B . I 5 HOH 60 1070 1070 HOH HOH B . I 5 HOH 61 1071 1071 HOH HOH B . I 5 HOH 62 1072 1072 HOH HOH B . I 5 HOH 63 1073 1073 HOH HOH B . I 5 HOH 64 1074 1074 HOH HOH B . I 5 HOH 65 1075 1075 HOH HOH B . I 5 HOH 66 1076 1076 HOH HOH B . I 5 HOH 67 1077 1077 HOH HOH B . I 5 HOH 68 1078 1078 HOH HOH B . I 5 HOH 69 1079 1079 HOH HOH B . I 5 HOH 70 1080 1080 HOH HOH B . I 5 HOH 71 1081 1081 HOH HOH B . I 5 HOH 72 1082 1082 HOH HOH B . I 5 HOH 73 1083 1083 HOH HOH B . I 5 HOH 74 1084 1084 HOH HOH B . I 5 HOH 75 1085 1085 HOH HOH B . I 5 HOH 76 1086 1086 HOH HOH B . I 5 HOH 77 1087 1087 HOH HOH B . I 5 HOH 78 1088 1088 HOH HOH B . I 5 HOH 79 1090 1090 HOH HOH B . I 5 HOH 80 1091 1091 HOH HOH B . I 5 HOH 81 1092 1092 HOH HOH B . I 5 HOH 82 1093 1093 HOH HOH B . I 5 HOH 83 1094 1094 HOH HOH B . I 5 HOH 84 1095 1095 HOH HOH B . I 5 HOH 85 1096 1096 HOH HOH B . I 5 HOH 86 1097 1097 HOH HOH B . I 5 HOH 87 1098 1098 HOH HOH B . I 5 HOH 88 1100 1100 HOH HOH B . I 5 HOH 89 1101 1101 HOH HOH B . I 5 HOH 90 1102 1102 HOH HOH B . I 5 HOH 91 1103 1103 HOH HOH B . I 5 HOH 92 1104 1104 HOH HOH B . I 5 HOH 93 1105 1105 HOH HOH B . I 5 HOH 94 1108 1108 HOH HOH B . I 5 HOH 95 1109 1109 HOH HOH B . I 5 HOH 96 1110 1110 HOH HOH B . I 5 HOH 97 1111 1111 HOH HOH B . I 5 HOH 98 1112 1112 HOH HOH B . I 5 HOH 99 1113 1113 HOH HOH B . I 5 HOH 100 1114 1114 HOH HOH B . I 5 HOH 101 1115 1115 HOH HOH B . I 5 HOH 102 1116 1116 HOH HOH B . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id ASN _pdbx_struct_mod_residue.label_seq_id 53 _pdbx_struct_mod_residue.auth_asym_id B _pdbx_struct_mod_residue.auth_comp_id ASN _pdbx_struct_mod_residue.auth_seq_id 60 _pdbx_struct_mod_residue.PDB_ins_code G _pdbx_struct_mod_residue.parent_comp_id ASN _pdbx_struct_mod_residue.details 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3670 ? 1 MORE -7 ? 1 'SSA (A^2)' 12650 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-10-20 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2020-07-29 4 'Structure model' 1 3 2021-10-13 5 'Structure model' 1 4 2023-09-06 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Non-polymer description' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Structure summary' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Structure summary' 8 5 'Structure model' 'Data collection' 9 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp 2 3 'Structure model' entity 3 3 'Structure model' pdbx_chem_comp_identifier 4 3 'Structure model' pdbx_entity_nonpoly 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_site 7 3 'Structure model' struct_site_gen 8 4 'Structure model' chem_comp 9 4 'Structure model' database_2 10 4 'Structure model' struct_ref_seq_dif 11 5 'Structure model' chem_comp_atom 12 5 'Structure model' chem_comp_bond 13 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_chem_comp.name' 2 3 'Structure model' '_chem_comp.type' 3 3 'Structure model' '_entity.pdbx_description' 4 3 'Structure model' '_pdbx_entity_nonpoly.name' 5 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 3 'Structure model' '_struct_conn.pdbx_role' 7 4 'Structure model' '_chem_comp.pdbx_synonyms' 8 4 'Structure model' '_database_2.pdbx_DOI' 9 4 'Structure model' '_database_2.pdbx_database_accession' 10 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 15.9655 3.7910 -9.9923 0.2108 0.1655 0.2651 0.0191 -0.0776 -0.0789 1.7723 9.3563 5.2063 2.1533 -2.9187 -2.0463 -0.1189 -0.1102 -0.2285 -0.3399 -0.0551 -0.6877 0.2389 0.2477 0.1740 'X-RAY DIFFRACTION' 2 ? refined 6.1706 4.8887 -10.6939 0.0943 0.1246 0.1150 -0.0510 -0.0626 -0.0172 3.0120 9.3923 2.2080 -1.2509 0.2512 -1.2112 -0.0110 0.1305 -0.4044 -0.4096 0.0350 0.4893 0.2083 -0.3074 -0.0241 'X-RAY DIFFRACTION' 3 ? refined 19.6565 12.6345 7.5358 0.0767 0.0998 0.0631 0.0103 -0.0041 0.0165 1.6836 2.4564 1.8811 0.8191 0.2452 0.6037 0.0071 -0.2319 -0.0454 0.2595 0.0502 -0.0723 0.2430 -0.0742 -0.0573 'X-RAY DIFFRACTION' 4 ? refined 18.6584 4.1757 11.1441 0.1849 0.1737 0.1020 0.0323 -0.0377 0.0528 1.3842 3.9772 1.9330 1.6910 0.0487 0.6390 -0.0113 -0.2730 -0.0290 0.2725 0.0223 -0.0575 0.1256 -0.1241 -0.0109 'X-RAY DIFFRACTION' 5 ? refined 28.0615 13.3530 3.8828 0.0350 0.1091 0.0635 0.0274 0.0098 -0.0154 2.1730 5.5204 2.8909 1.4830 0.5976 0.3186 0.0424 -0.1943 -0.0916 0.1597 0.0767 -0.4249 -0.0052 0.2849 -0.1191 'X-RAY DIFFRACTION' 6 ? refined 21.9467 19.0259 -14.6506 0.2054 0.1400 0.0422 -0.0304 -0.0100 0.0176 2.6770 4.6051 2.3917 2.8120 -1.0836 -1.6443 -0.1804 0.2855 0.0280 -0.4022 0.2342 0.0075 0.0987 -0.0042 -0.0537 'X-RAY DIFFRACTION' 7 ? refined 12.0776 24.4083 -0.3828 0.2066 0.1214 0.1268 0.0660 0.0443 -0.0372 1.8984 6.3119 1.3948 1.0451 0.9836 0.8471 0.0231 -0.1396 0.1811 0.4623 0.0892 0.1849 -0.3035 -0.1286 -0.1122 'X-RAY DIFFRACTION' 8 ? refined 14.9316 30.4184 -2.7760 0.2427 0.1317 0.1828 0.0593 0.0653 -0.0055 9.1674 4.8049 2.4865 2.7655 1.6999 1.2082 0.2980 -0.2928 1.0050 0.3034 -0.2840 0.4867 -0.4444 -0.4912 -0.0140 'X-RAY DIFFRACTION' 9 ? refined 6.3480 24.4303 3.5146 0.4969 0.6795 0.3890 0.3276 -0.1144 -0.2570 0.7352 10.7002 4.8708 1.3134 0.1805 6.6179 0.0124 -0.2793 0.4103 -0.9560 -0.4912 1.1446 -0.8789 -0.2696 0.4788 'X-RAY DIFFRACTION' 10 ? refined 16.7784 16.6941 -5.2913 0.0842 0.0649 0.0592 -0.0101 0.0083 0.0073 1.4515 2.1674 5.3733 -0.0496 1.3092 1.7013 -0.0510 0.0269 0.0620 -0.1466 -0.0024 0.0492 -0.1086 0.0742 0.0535 'X-RAY DIFFRACTION' 11 ? refined 10.0946 30.4405 6.7321 0.4878 0.3971 0.2688 0.1194 0.1471 -0.0918 1.3774 9.6686 6.9423 -1.2053 2.7206 -6.0564 -0.2466 -0.3996 0.1651 1.0051 0.3027 0.7494 -0.8392 -0.7722 -0.0561 'X-RAY DIFFRACTION' 12 ? refined 29.9247 18.7533 -4.4102 0.0808 0.1582 0.1747 -0.0016 0.0372 -0.0090 3.8054 4.3172 3.7393 0.2887 -2.4455 -0.1827 0.0532 0.0973 0.1492 -0.2749 -0.0483 -0.7310 -0.0325 0.4002 -0.0049 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 1 A 7 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 A 8 A 14 ? . . . . ? 'X-RAY DIFFRACTION' 3 3 B 16 B 60 ? . . . . ? 'X-RAY DIFFRACTION' 4 4 B 61 B 82 ? . . . . ? 'X-RAY DIFFRACTION' 5 5 B 83 B 121 ? . . . . ? 'X-RAY DIFFRACTION' 6 6 B 122 B 130 ? . . . . ? 'X-RAY DIFFRACTION' 7 7 B 131 B 175 ? . . . . ? 'X-RAY DIFFRACTION' 8 8 B 176 B 186 ? . . . . ? 'X-RAY DIFFRACTION' 9 9 B 187 B 193 ? . . . . ? 'X-RAY DIFFRACTION' 10 10 B 194 B 217 ? . . . . ? 'X-RAY DIFFRACTION' 11 11 B 219 B 225 ? . . . . ? 'X-RAY DIFFRACTION' 12 12 B 226 B 245 ? . . . . ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345dtb 'data collection' . ? 1 MOLREP phasing 'from CCP4' ? 2 REFMAC refinement 5.5.0088 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 O _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 VAL _pdbx_validate_rmsd_angle.auth_seq_id_1 31 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 C _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 VAL _pdbx_validate_rmsd_angle.auth_seq_id_2 31 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 N _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 MET _pdbx_validate_rmsd_angle.auth_seq_id_3 32 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 B _pdbx_validate_rmsd_angle.angle_value 112.98 _pdbx_validate_rmsd_angle.angle_target_value 122.70 _pdbx_validate_rmsd_angle.angle_deviation -9.72 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.60 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 1 C ? 140.05 -35.91 2 1 PHE A 7 ? ? -125.03 -83.36 3 1 ASN B 60 G ? -154.24 71.75 4 1 GLU B 97 A ? -112.02 -72.79 5 1 PRO B 186 ? ? -44.91 -10.16 6 1 ASP B 186 A ? -64.22 -94.76 7 1 GLU B 186 B ? 160.18 124.18 8 1 LYS B 186 D ? 118.72 -179.49 9 1 ARG B 187 ? ? -154.56 34.78 10 1 ASP B 189 ? ? -178.31 144.88 11 1 SER B 214 ? ? -94.90 -148.13 12 1 ASP B 222 ? ? 38.58 77.02 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 GLY _pdbx_validate_peptide_omega.auth_asym_id_1 B _pdbx_validate_peptide_omega.auth_seq_id_1 142 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 PRO _pdbx_validate_peptide_omega.auth_asym_id_2 B _pdbx_validate_peptide_omega.auth_seq_id_2 143 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -149.84 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A THR -3 ? A THR 1 2 1 Y 1 A PHE -2 ? A PHE 2 3 1 Y 1 A GLY -1 ? A GLY 3 4 1 Y 1 A SER 0 ? A SER 4 5 1 Y 1 A ASP 14 L A ASP 34 6 1 Y 1 A GLY 14 M A GLY 35 7 1 Y 1 A ARG 15 ? A ARG 36 8 1 Y 1 B LYS 145 ? B LYS 145 9 1 Y 1 B GLU 146 ? B GLU 146 10 1 Y 1 B THR 147 ? B THR 147 11 1 Y 1 B TRP 148 ? B TRP 148 12 1 Y 1 B THR 149 ? B THR 149 13 1 Y 1 B ALA 149 A B ALA 150 14 1 Y 1 B ASN 149 B B ASN 151 15 1 Y 1 B VAL 149 C B VAL 152 16 1 Y 1 B GLY 149 D B GLY 153 17 1 Y 1 B LYS 149 E B LYS 154 18 1 Y 1 B GLY 246 ? B GLY 258 19 1 Y 1 B GLU 247 ? B GLU 259 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GOL C1 C N N 137 GOL O1 O N N 138 GOL C2 C N N 139 GOL O2 O N N 140 GOL C3 C N N 141 GOL O3 O N N 142 GOL H11 H N N 143 GOL H12 H N N 144 GOL HO1 H N N 145 GOL H2 H N N 146 GOL HO2 H N N 147 GOL H31 H N N 148 GOL H32 H N N 149 GOL HO3 H N N 150 HIS N N N N 151 HIS CA C N S 152 HIS C C N N 153 HIS O O N N 154 HIS CB C N N 155 HIS CG C Y N 156 HIS ND1 N Y N 157 HIS CD2 C Y N 158 HIS CE1 C Y N 159 HIS NE2 N Y N 160 HIS OXT O N N 161 HIS H H N N 162 HIS H2 H N N 163 HIS HA H N N 164 HIS HB2 H N N 165 HIS HB3 H N N 166 HIS HD1 H N N 167 HIS HD2 H N N 168 HIS HE1 H N N 169 HIS HE2 H N N 170 HIS HXT H N N 171 HOH O O N N 172 HOH H1 H N N 173 HOH H2 H N N 174 ILE N N N N 175 ILE CA C N S 176 ILE C C N N 177 ILE O O N N 178 ILE CB C N S 179 ILE CG1 C N N 180 ILE CG2 C N N 181 ILE CD1 C N N 182 ILE OXT O N N 183 ILE H H N N 184 ILE H2 H N N 185 ILE HA H N N 186 ILE HB H N N 187 ILE HG12 H N N 188 ILE HG13 H N N 189 ILE HG21 H N N 190 ILE HG22 H N N 191 ILE HG23 H N N 192 ILE HD11 H N N 193 ILE HD12 H N N 194 ILE HD13 H N N 195 ILE HXT H N N 196 LEU N N N N 197 LEU CA C N S 198 LEU C C N N 199 LEU O O N N 200 LEU CB C N N 201 LEU CG C N N 202 LEU CD1 C N N 203 LEU CD2 C N N 204 LEU OXT O N N 205 LEU H H N N 206 LEU H2 H N N 207 LEU HA H N N 208 LEU HB2 H N N 209 LEU HB3 H N N 210 LEU HG H N N 211 LEU HD11 H N N 212 LEU HD12 H N N 213 LEU HD13 H N N 214 LEU HD21 H N N 215 LEU HD22 H N N 216 LEU HD23 H N N 217 LEU HXT H N N 218 LYS N N N N 219 LYS CA C N S 220 LYS C C N N 221 LYS O O N N 222 LYS CB C N N 223 LYS CG C N N 224 LYS CD C N N 225 LYS CE C N N 226 LYS NZ N N N 227 LYS OXT O N N 228 LYS H H N N 229 LYS H2 H N N 230 LYS HA H N N 231 LYS HB2 H N N 232 LYS HB3 H N N 233 LYS HG2 H N N 234 LYS HG3 H N N 235 LYS HD2 H N N 236 LYS HD3 H N N 237 LYS HE2 H N N 238 LYS HE3 H N N 239 LYS HZ1 H N N 240 LYS HZ2 H N N 241 LYS HZ3 H N N 242 LYS HXT H N N 243 MET N N N N 244 MET CA C N S 245 MET C C N N 246 MET O O N N 247 MET CB C N N 248 MET CG C N N 249 MET SD S N N 250 MET CE C N N 251 MET OXT O N N 252 MET H H N N 253 MET H2 H N N 254 MET HA H N N 255 MET HB2 H N N 256 MET HB3 H N N 257 MET HG2 H N N 258 MET HG3 H N N 259 MET HE1 H N N 260 MET HE2 H N N 261 MET HE3 H N N 262 MET HXT H N N 263 NAG C1 C N R 264 NAG C2 C N R 265 NAG C3 C N R 266 NAG C4 C N S 267 NAG C5 C N R 268 NAG C6 C N N 269 NAG C7 C N N 270 NAG C8 C N N 271 NAG N2 N N N 272 NAG O1 O N N 273 NAG O3 O N N 274 NAG O4 O N N 275 NAG O5 O N N 276 NAG O6 O N N 277 NAG O7 O N N 278 NAG H1 H N N 279 NAG H2 H N N 280 NAG H3 H N N 281 NAG H4 H N N 282 NAG H5 H N N 283 NAG H61 H N N 284 NAG H62 H N N 285 NAG H81 H N N 286 NAG H82 H N N 287 NAG H83 H N N 288 NAG HN2 H N N 289 NAG HO1 H N N 290 NAG HO3 H N N 291 NAG HO4 H N N 292 NAG HO6 H N N 293 PHE N N N N 294 PHE CA C N S 295 PHE C C N N 296 PHE O O N N 297 PHE CB C N N 298 PHE CG C Y N 299 PHE CD1 C Y N 300 PHE CD2 C Y N 301 PHE CE1 C Y N 302 PHE CE2 C Y N 303 PHE CZ C Y N 304 PHE OXT O N N 305 PHE H H N N 306 PHE H2 H N N 307 PHE HA H N N 308 PHE HB2 H N N 309 PHE HB3 H N N 310 PHE HD1 H N N 311 PHE HD2 H N N 312 PHE HE1 H N N 313 PHE HE2 H N N 314 PHE HZ H N N 315 PHE HXT H N N 316 PRO N N N N 317 PRO CA C N S 318 PRO C C N N 319 PRO O O N N 320 PRO CB C N N 321 PRO CG C N N 322 PRO CD C N N 323 PRO OXT O N N 324 PRO H H N N 325 PRO HA H N N 326 PRO HB2 H N N 327 PRO HB3 H N N 328 PRO HG2 H N N 329 PRO HG3 H N N 330 PRO HD2 H N N 331 PRO HD3 H N N 332 PRO HXT H N N 333 SER N N N N 334 SER CA C N S 335 SER C C N N 336 SER O O N N 337 SER CB C N N 338 SER OG O N N 339 SER OXT O N N 340 SER H H N N 341 SER H2 H N N 342 SER HA H N N 343 SER HB2 H N N 344 SER HB3 H N N 345 SER HG H N N 346 SER HXT H N N 347 THR N N N N 348 THR CA C N S 349 THR C C N N 350 THR O O N N 351 THR CB C N R 352 THR OG1 O N N 353 THR CG2 C N N 354 THR OXT O N N 355 THR H H N N 356 THR H2 H N N 357 THR HA H N N 358 THR HB H N N 359 THR HG1 H N N 360 THR HG21 H N N 361 THR HG22 H N N 362 THR HG23 H N N 363 THR HXT H N N 364 TRP N N N N 365 TRP CA C N S 366 TRP C C N N 367 TRP O O N N 368 TRP CB C N N 369 TRP CG C Y N 370 TRP CD1 C Y N 371 TRP CD2 C Y N 372 TRP NE1 N Y N 373 TRP CE2 C Y N 374 TRP CE3 C Y N 375 TRP CZ2 C Y N 376 TRP CZ3 C Y N 377 TRP CH2 C Y N 378 TRP OXT O N N 379 TRP H H N N 380 TRP H2 H N N 381 TRP HA H N N 382 TRP HB2 H N N 383 TRP HB3 H N N 384 TRP HD1 H N N 385 TRP HE1 H N N 386 TRP HE3 H N N 387 TRP HZ2 H N N 388 TRP HZ3 H N N 389 TRP HH2 H N N 390 TRP HXT H N N 391 TYR N N N N 392 TYR CA C N S 393 TYR C C N N 394 TYR O O N N 395 TYR CB C N N 396 TYR CG C Y N 397 TYR CD1 C Y N 398 TYR CD2 C Y N 399 TYR CE1 C Y N 400 TYR CE2 C Y N 401 TYR CZ C Y N 402 TYR OH O N N 403 TYR OXT O N N 404 TYR H H N N 405 TYR H2 H N N 406 TYR HA H N N 407 TYR HB2 H N N 408 TYR HB3 H N N 409 TYR HD1 H N N 410 TYR HD2 H N N 411 TYR HE1 H N N 412 TYR HE2 H N N 413 TYR HH H N N 414 TYR HXT H N N 415 VAL N N N N 416 VAL CA C N S 417 VAL C C N N 418 VAL O O N N 419 VAL CB C N N 420 VAL CG1 C N N 421 VAL CG2 C N N 422 VAL OXT O N N 423 VAL H H N N 424 VAL H2 H N N 425 VAL HA H N N 426 VAL HB H N N 427 VAL HG11 H N N 428 VAL HG12 H N N 429 VAL HG13 H N N 430 VAL HG21 H N N 431 VAL HG22 H N N 432 VAL HG23 H N N 433 VAL HXT H N N 434 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GOL C1 O1 sing N N 129 GOL C1 C2 sing N N 130 GOL C1 H11 sing N N 131 GOL C1 H12 sing N N 132 GOL O1 HO1 sing N N 133 GOL C2 O2 sing N N 134 GOL C2 C3 sing N N 135 GOL C2 H2 sing N N 136 GOL O2 HO2 sing N N 137 GOL C3 O3 sing N N 138 GOL C3 H31 sing N N 139 GOL C3 H32 sing N N 140 GOL O3 HO3 sing N N 141 HIS N CA sing N N 142 HIS N H sing N N 143 HIS N H2 sing N N 144 HIS CA C sing N N 145 HIS CA CB sing N N 146 HIS CA HA sing N N 147 HIS C O doub N N 148 HIS C OXT sing N N 149 HIS CB CG sing N N 150 HIS CB HB2 sing N N 151 HIS CB HB3 sing N N 152 HIS CG ND1 sing Y N 153 HIS CG CD2 doub Y N 154 HIS ND1 CE1 doub Y N 155 HIS ND1 HD1 sing N N 156 HIS CD2 NE2 sing Y N 157 HIS CD2 HD2 sing N N 158 HIS CE1 NE2 sing Y N 159 HIS CE1 HE1 sing N N 160 HIS NE2 HE2 sing N N 161 HIS OXT HXT sing N N 162 HOH O H1 sing N N 163 HOH O H2 sing N N 164 ILE N CA sing N N 165 ILE N H sing N N 166 ILE N H2 sing N N 167 ILE CA C sing N N 168 ILE CA CB sing N N 169 ILE CA HA sing N N 170 ILE C O doub N N 171 ILE C OXT sing N N 172 ILE CB CG1 sing N N 173 ILE CB CG2 sing N N 174 ILE CB HB sing N N 175 ILE CG1 CD1 sing N N 176 ILE CG1 HG12 sing N N 177 ILE CG1 HG13 sing N N 178 ILE CG2 HG21 sing N N 179 ILE CG2 HG22 sing N N 180 ILE CG2 HG23 sing N N 181 ILE CD1 HD11 sing N N 182 ILE CD1 HD12 sing N N 183 ILE CD1 HD13 sing N N 184 ILE OXT HXT sing N N 185 LEU N CA sing N N 186 LEU N H sing N N 187 LEU N H2 sing N N 188 LEU CA C sing N N 189 LEU CA CB sing N N 190 LEU CA HA sing N N 191 LEU C O doub N N 192 LEU C OXT sing N N 193 LEU CB CG sing N N 194 LEU CB HB2 sing N N 195 LEU CB HB3 sing N N 196 LEU CG CD1 sing N N 197 LEU CG CD2 sing N N 198 LEU CG HG sing N N 199 LEU CD1 HD11 sing N N 200 LEU CD1 HD12 sing N N 201 LEU CD1 HD13 sing N N 202 LEU CD2 HD21 sing N N 203 LEU CD2 HD22 sing N N 204 LEU CD2 HD23 sing N N 205 LEU OXT HXT sing N N 206 LYS N CA sing N N 207 LYS N H sing N N 208 LYS N H2 sing N N 209 LYS CA C sing N N 210 LYS CA CB sing N N 211 LYS CA HA sing N N 212 LYS C O doub N N 213 LYS C OXT sing N N 214 LYS CB CG sing N N 215 LYS CB HB2 sing N N 216 LYS CB HB3 sing N N 217 LYS CG CD sing N N 218 LYS CG HG2 sing N N 219 LYS CG HG3 sing N N 220 LYS CD CE sing N N 221 LYS CD HD2 sing N N 222 LYS CD HD3 sing N N 223 LYS CE NZ sing N N 224 LYS CE HE2 sing N N 225 LYS CE HE3 sing N N 226 LYS NZ HZ1 sing N N 227 LYS NZ HZ2 sing N N 228 LYS NZ HZ3 sing N N 229 LYS OXT HXT sing N N 230 MET N CA sing N N 231 MET N H sing N N 232 MET N H2 sing N N 233 MET CA C sing N N 234 MET CA CB sing N N 235 MET CA HA sing N N 236 MET C O doub N N 237 MET C OXT sing N N 238 MET CB CG sing N N 239 MET CB HB2 sing N N 240 MET CB HB3 sing N N 241 MET CG SD sing N N 242 MET CG HG2 sing N N 243 MET CG HG3 sing N N 244 MET SD CE sing N N 245 MET CE HE1 sing N N 246 MET CE HE2 sing N N 247 MET CE HE3 sing N N 248 MET OXT HXT sing N N 249 NAG C1 C2 sing N N 250 NAG C1 O1 sing N N 251 NAG C1 O5 sing N N 252 NAG C1 H1 sing N N 253 NAG C2 C3 sing N N 254 NAG C2 N2 sing N N 255 NAG C2 H2 sing N N 256 NAG C3 C4 sing N N 257 NAG C3 O3 sing N N 258 NAG C3 H3 sing N N 259 NAG C4 C5 sing N N 260 NAG C4 O4 sing N N 261 NAG C4 H4 sing N N 262 NAG C5 C6 sing N N 263 NAG C5 O5 sing N N 264 NAG C5 H5 sing N N 265 NAG C6 O6 sing N N 266 NAG C6 H61 sing N N 267 NAG C6 H62 sing N N 268 NAG C7 C8 sing N N 269 NAG C7 N2 sing N N 270 NAG C7 O7 doub N N 271 NAG C8 H81 sing N N 272 NAG C8 H82 sing N N 273 NAG C8 H83 sing N N 274 NAG N2 HN2 sing N N 275 NAG O1 HO1 sing N N 276 NAG O3 HO3 sing N N 277 NAG O4 HO4 sing N N 278 NAG O6 HO6 sing N N 279 PHE N CA sing N N 280 PHE N H sing N N 281 PHE N H2 sing N N 282 PHE CA C sing N N 283 PHE CA CB sing N N 284 PHE CA HA sing N N 285 PHE C O doub N N 286 PHE C OXT sing N N 287 PHE CB CG sing N N 288 PHE CB HB2 sing N N 289 PHE CB HB3 sing N N 290 PHE CG CD1 doub Y N 291 PHE CG CD2 sing Y N 292 PHE CD1 CE1 sing Y N 293 PHE CD1 HD1 sing N N 294 PHE CD2 CE2 doub Y N 295 PHE CD2 HD2 sing N N 296 PHE CE1 CZ doub Y N 297 PHE CE1 HE1 sing N N 298 PHE CE2 CZ sing Y N 299 PHE CE2 HE2 sing N N 300 PHE CZ HZ sing N N 301 PHE OXT HXT sing N N 302 PRO N CA sing N N 303 PRO N CD sing N N 304 PRO N H sing N N 305 PRO CA C sing N N 306 PRO CA CB sing N N 307 PRO CA HA sing N N 308 PRO C O doub N N 309 PRO C OXT sing N N 310 PRO CB CG sing N N 311 PRO CB HB2 sing N N 312 PRO CB HB3 sing N N 313 PRO CG CD sing N N 314 PRO CG HG2 sing N N 315 PRO CG HG3 sing N N 316 PRO CD HD2 sing N N 317 PRO CD HD3 sing N N 318 PRO OXT HXT sing N N 319 SER N CA sing N N 320 SER N H sing N N 321 SER N H2 sing N N 322 SER CA C sing N N 323 SER CA CB sing N N 324 SER CA HA sing N N 325 SER C O doub N N 326 SER C OXT sing N N 327 SER CB OG sing N N 328 SER CB HB2 sing N N 329 SER CB HB3 sing N N 330 SER OG HG sing N N 331 SER OXT HXT sing N N 332 THR N CA sing N N 333 THR N H sing N N 334 THR N H2 sing N N 335 THR CA C sing N N 336 THR CA CB sing N N 337 THR CA HA sing N N 338 THR C O doub N N 339 THR C OXT sing N N 340 THR CB OG1 sing N N 341 THR CB CG2 sing N N 342 THR CB HB sing N N 343 THR OG1 HG1 sing N N 344 THR CG2 HG21 sing N N 345 THR CG2 HG22 sing N N 346 THR CG2 HG23 sing N N 347 THR OXT HXT sing N N 348 TRP N CA sing N N 349 TRP N H sing N N 350 TRP N H2 sing N N 351 TRP CA C sing N N 352 TRP CA CB sing N N 353 TRP CA HA sing N N 354 TRP C O doub N N 355 TRP C OXT sing N N 356 TRP CB CG sing N N 357 TRP CB HB2 sing N N 358 TRP CB HB3 sing N N 359 TRP CG CD1 doub Y N 360 TRP CG CD2 sing Y N 361 TRP CD1 NE1 sing Y N 362 TRP CD1 HD1 sing N N 363 TRP CD2 CE2 doub Y N 364 TRP CD2 CE3 sing Y N 365 TRP NE1 CE2 sing Y N 366 TRP NE1 HE1 sing N N 367 TRP CE2 CZ2 sing Y N 368 TRP CE3 CZ3 doub Y N 369 TRP CE3 HE3 sing N N 370 TRP CZ2 CH2 doub Y N 371 TRP CZ2 HZ2 sing N N 372 TRP CZ3 CH2 sing Y N 373 TRP CZ3 HZ3 sing N N 374 TRP CH2 HH2 sing N N 375 TRP OXT HXT sing N N 376 TYR N CA sing N N 377 TYR N H sing N N 378 TYR N H2 sing N N 379 TYR CA C sing N N 380 TYR CA CB sing N N 381 TYR CA HA sing N N 382 TYR C O doub N N 383 TYR C OXT sing N N 384 TYR CB CG sing N N 385 TYR CB HB2 sing N N 386 TYR CB HB3 sing N N 387 TYR CG CD1 doub Y N 388 TYR CG CD2 sing Y N 389 TYR CD1 CE1 sing Y N 390 TYR CD1 HD1 sing N N 391 TYR CD2 CE2 doub Y N 392 TYR CD2 HD2 sing N N 393 TYR CE1 CZ doub Y N 394 TYR CE1 HE1 sing N N 395 TYR CE2 CZ sing Y N 396 TYR CE2 HE2 sing N N 397 TYR CZ OH sing N N 398 TYR OH HH sing N N 399 TYR OXT HXT sing N N 400 VAL N CA sing N N 401 VAL N H sing N N 402 VAL N H2 sing N N 403 VAL CA C sing N N 404 VAL CA CB sing N N 405 VAL CA HA sing N N 406 VAL C O doub N N 407 VAL C OXT sing N N 408 VAL CB CG1 sing N N 409 VAL CB CG2 sing N N 410 VAL CB HB sing N N 411 VAL CG1 HG11 sing N N 412 VAL CG1 HG12 sing N N 413 VAL CG1 HG13 sing N N 414 VAL CG2 HG21 sing N N 415 VAL CG2 HG22 sing N N 416 VAL CG2 HG23 sing N N 417 VAL OXT HXT sing N N 418 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 4 GLYCEROL GOL 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3BEI _pdbx_initial_refinement_model.details 'PEB entry 3BEI' #