HEADER OXIDOREDUCTASE 30-SEP-09 3K2E TITLE CRYSTAL STRUCTURE OF ENOYL-(ACYL-CARRIER-PROTEIN) REDUCTASE FROM TITLE 2 ANAPLASMA PHAGOCYTOPHILUM AT 1.9A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENOYL-(ACYL-CARRIER-PROTEIN) REDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.3.1.9; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ANAPLASMA PHAGOCYTOPHILUM; SOURCE 3 ORGANISM_TAXID: 948; SOURCE 4 GENE: FABI, APH_0473; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: AVA0421 KEYWDS SSGCID, NIH, NIAID, SBRI, UW, DECODE, EONYL-(ACYL-CARRIER-PROTEIN) KEYWDS 2 REDUCTASE, ANAPLASMA PHAGOCYTOPHILUM, OXIDOREDUCTASE, STRUCTURAL KEYWDS 3 GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE EXPDTA X-RAY DIFFRACTION AUTHOR J.ABENDROTH,B.STAKER,SEATTLE STRUCTURAL GENOMICS CENTER FOR AUTHOR 2 INFECTIOUS DISEASE (SSGCID) REVDAT 3 06-SEP-23 3K2E 1 REMARK REVDAT 2 13-JUL-11 3K2E 1 VERSN REVDAT 1 13-OCT-09 3K2E 0 JRNL AUTH J.ABENDROTH,B.STAKER JRNL TITL CRYSTAL STRUCTURE OF ENOYL-(ACYL-CARRIER-PROTEIN) REDUCTASE JRNL TITL 2 FROM ANAPLASMA PHAGOCYTOPHILUM AT 1.9A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0104 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 44593 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.154 REMARK 3 R VALUE (WORKING SET) : 0.151 REMARK 3 FREE R VALUE : 0.194 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2251 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2813 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.41 REMARK 3 BIN R VALUE (WORKING SET) : 0.2540 REMARK 3 BIN FREE R VALUE SET COUNT : 155 REMARK 3 BIN FREE R VALUE : 0.3120 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3839 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 44 REMARK 3 SOLVENT ATOMS : 323 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.19 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.11000 REMARK 3 B22 (A**2) : 0.23000 REMARK 3 B33 (A**2) : -0.35000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.120 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.119 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.071 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.446 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.940 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3965 ; 0.019 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2538 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5381 ; 1.673 ; 1.963 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6239 ; 0.976 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 523 ; 5.734 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 144 ;37.672 ;24.583 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 622 ;12.351 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;17.911 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 633 ; 0.098 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4431 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 770 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2565 ; 0.956 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1072 ; 0.279 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4098 ; 1.663 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1400 ; 2.699 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1279 ; 4.232 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -10 A 9999 REMARK 3 ORIGIN FOR THE GROUP (A): 36.6583 14.8745 63.9395 REMARK 3 T TENSOR REMARK 3 T11: 0.0264 T22: 0.0082 REMARK 3 T33: 0.0207 T12: 0.0038 REMARK 3 T13: -0.0026 T23: 0.0112 REMARK 3 L TENSOR REMARK 3 L11: 0.1846 L22: 0.1400 REMARK 3 L33: 0.2793 L12: -0.1032 REMARK 3 L13: -0.0162 L23: 0.0354 REMARK 3 S TENSOR REMARK 3 S11: 0.0373 S12: 0.0252 S13: 0.0348 REMARK 3 S21: -0.0432 S22: -0.0275 S23: -0.0241 REMARK 3 S31: -0.0341 S32: -0.0104 S33: -0.0099 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -10 B 9999 REMARK 3 ORIGIN FOR THE GROUP (A): 28.9227 9.6967 94.3377 REMARK 3 T TENSOR REMARK 3 T11: 0.0109 T22: 0.0323 REMARK 3 T33: 0.0159 T12: 0.0152 REMARK 3 T13: 0.0007 T23: -0.0113 REMARK 3 L TENSOR REMARK 3 L11: 0.1240 L22: 0.1946 REMARK 3 L33: 0.2169 L12: -0.1100 REMARK 3 L13: 0.0013 L23: -0.0072 REMARK 3 S TENSOR REMARK 3 S11: -0.0306 S12: -0.0399 S13: -0.0008 REMARK 3 S21: 0.0347 S22: 0.0340 S23: 0.0262 REMARK 3 S31: -0.0216 S32: -0.0331 S33: -0.0035 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3K2E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-SEP-09. REMARK 100 THE DEPOSITION ID IS D_1000055459. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-AUG-09 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944+ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44593 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 6.100 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.7100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.4 REMARK 200 DATA REDUNDANCY IN SHELL : 2.20 REMARK 200 R MERGE FOR SHELL (I) : 0.43600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3GRK MODIFIED WITH CCP4 PROGRAM CHAINSAW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: JCSG+ SCREEN CONDITION E11: 100MM REMARK 280 IMIDAZOLE PH 80, 10% PEG 8000; ANPHA.00817.A AT 23MG/ML, PH 8.0, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 290K, PH 8.00 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 40.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.70000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 40.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.70000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 19260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -78.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 80.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 ALA A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 MET A -12 REMARK 465 GLY A -11 REMARK 465 THR A -10 REMARK 465 LEU A -9 REMARK 465 GLU A -8 REMARK 465 ALA A -7 REMARK 465 GLN A -6 REMARK 465 THR A -5 REMARK 465 GLN A -4 REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ASP A 262 REMARK 465 ALA A 263 REMARK 465 PRO A 264 REMARK 465 ASP A 265 REMARK 465 ILE A 266 REMARK 465 SER A 267 REMARK 465 ARG A 268 REMARK 465 VAL A 269 REMARK 465 LYS A 270 REMARK 465 GLY A 271 REMARK 465 ASP A 272 REMARK 465 HIS A 273 REMARK 465 SER A 274 REMARK 465 VAL A 275 REMARK 465 MET B -20 REMARK 465 ALA B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 MET B -12 REMARK 465 GLY B -11 REMARK 465 THR B -10 REMARK 465 LEU B -9 REMARK 465 GLU B -8 REMARK 465 ALA B -7 REMARK 465 GLN B -6 REMARK 465 THR B -5 REMARK 465 GLN B -4 REMARK 465 GLY B -3 REMARK 465 PRO B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 THR B 196 REMARK 465 LEU B 197 REMARK 465 ALA B 198 REMARK 465 SER B 199 REMARK 465 SER B 200 REMARK 465 GLY B 201 REMARK 465 ILE B 202 REMARK 465 SER B 267 REMARK 465 ARG B 268 REMARK 465 VAL B 269 REMARK 465 LYS B 270 REMARK 465 GLY B 271 REMARK 465 ASP B 272 REMARK 465 HIS B 273 REMARK 465 SER B 274 REMARK 465 VAL B 275 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 2 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 45 CG CD OE1 OE2 REMARK 470 LYS A 49 CG CD CE NZ REMARK 470 ARG A 50 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 56 CG CD OE1 OE2 REMARK 470 LYS A 61 CG CD CE NZ REMARK 470 LYS A 104 CG CD CE NZ REMARK 470 LYS A 181 CG CD CE NZ REMARK 470 ARG A 219 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 261 CG1 CG2 REMARK 470 ARG B 2 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 21 CG CD CE NZ REMARK 470 LYS B 49 CG CD CE NZ REMARK 470 ARG B 50 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 56 CG CD OE1 OE2 REMARK 470 LYS B 61 CG CD CE NZ REMARK 470 LYS B 79 CG CD CE NZ REMARK 470 ASP B 204 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 407 O HOH A 411 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TYR A 233 CZ TYR A 233 OH 0.137 REMARK 500 TYR A 233 CE2 TYR A 233 CD2 0.093 REMARK 500 TYR B 233 CZ TYR B 233 OH 0.129 REMARK 500 TYR B 233 CE2 TYR B 233 CD2 0.136 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 66 114.69 -161.03 REMARK 500 CYS A 123 -61.12 -120.29 REMARK 500 MET A 137 78.08 -103.05 REMARK 500 TYR A 158 -44.78 -130.45 REMARK 500 ASN A 159 -116.85 46.16 REMARK 500 ASP A 250 18.63 -145.65 REMARK 500 MET A 258 -67.65 -150.84 REMARK 500 LYS A 259 147.71 -175.37 REMARK 500 CYS B 66 119.87 -162.54 REMARK 500 ASN B 159 -115.95 36.16 REMARK 500 ASP B 250 22.79 -147.76 REMARK 500 LYS B 259 135.08 -38.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: ANPHA.00817.A RELATED DB: TARGETDB DBREF 3K2E A 1 275 UNP Q2GKM8 Q2GKM8_ANAPZ 1 275 DBREF 3K2E B 1 275 UNP Q2GKM8 Q2GKM8_ANAPZ 1 275 SEQADV 3K2E MET A -20 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E ALA A -19 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E HIS A -18 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E HIS A -17 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E HIS A -16 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E HIS A -15 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E HIS A -14 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E HIS A -13 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E MET A -12 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E GLY A -11 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E THR A -10 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E LEU A -9 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E GLU A -8 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E ALA A -7 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E GLN A -6 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E THR A -5 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E GLN A -4 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E GLY A -3 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E PRO A -2 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E GLY A -1 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E SER A 0 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E MET B -20 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E ALA B -19 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E HIS B -18 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E HIS B -17 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E HIS B -16 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E HIS B -15 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E HIS B -14 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E HIS B -13 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E MET B -12 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E GLY B -11 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E THR B -10 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E LEU B -9 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E GLU B -8 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E ALA B -7 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E GLN B -6 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E THR B -5 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E GLN B -4 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E GLY B -3 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E PRO B -2 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E GLY B -1 UNP Q2GKM8 EXPRESSION TAG SEQADV 3K2E SER B 0 UNP Q2GKM8 EXPRESSION TAG SEQRES 1 A 296 MET ALA HIS HIS HIS HIS HIS HIS MET GLY THR LEU GLU SEQRES 2 A 296 ALA GLN THR GLN GLY PRO GLY SER MET ARG THR GLY MET SEQRES 3 A 296 LEU MET GLU GLY LYS LYS GLY VAL ILE ILE GLY VAL ALA SEQRES 4 A 296 ASN ASP LYS SER LEU ALA TRP GLY ILE ALA LYS ALA VAL SEQRES 5 A 296 CYS ALA GLN GLY ALA GLU VAL ALA LEU THR TYR LEU SER SEQRES 6 A 296 GLU THR PHE LYS LYS ARG VAL ASP PRO LEU ALA GLU SER SEQRES 7 A 296 LEU GLY VAL LYS LEU THR VAL PRO CYS ASP VAL SER ASP SEQRES 8 A 296 ALA GLU SER VAL ASP ASN MET PHE LYS VAL LEU ALA GLU SEQRES 9 A 296 GLU TRP GLY SER LEU ASP PHE VAL VAL HIS ALA VAL ALA SEQRES 10 A 296 PHE SER ASP LYS ASN GLU LEU LYS GLY ARG TYR VAL ASP SEQRES 11 A 296 THR SER LEU GLY ASN PHE LEU THR SER MET HIS ILE SER SEQRES 12 A 296 CYS TYR SER PHE THR TYR ILE ALA SER LYS ALA GLU PRO SEQRES 13 A 296 LEU MET THR ASN GLY GLY SER ILE LEU THR LEU SER TYR SEQRES 14 A 296 TYR GLY ALA GLU LYS VAL VAL PRO HIS TYR ASN VAL MET SEQRES 15 A 296 GLY VAL CYS LYS ALA ALA LEU GLU ALA SER VAL LYS TYR SEQRES 16 A 296 LEU ALA VAL ASP LEU GLY LYS GLN GLN ILE ARG VAL ASN SEQRES 17 A 296 ALA ILE SER ALA GLY PRO VAL ARG THR LEU ALA SER SER SEQRES 18 A 296 GLY ILE SER ASP PHE HIS TYR ILE LEU THR TRP ASN LYS SEQRES 19 A 296 TYR ASN SER PRO LEU ARG ARG ASN THR THR LEU ASP ASP SEQRES 20 A 296 VAL GLY GLY ALA ALA LEU TYR LEU LEU SER ASP LEU GLY SEQRES 21 A 296 ARG GLY THR THR GLY GLU THR VAL HIS VAL ASP CYS GLY SEQRES 22 A 296 TYR HIS VAL VAL GLY MET LYS SER VAL ASP ALA PRO ASP SEQRES 23 A 296 ILE SER ARG VAL LYS GLY ASP HIS SER VAL SEQRES 1 B 296 MET ALA HIS HIS HIS HIS HIS HIS MET GLY THR LEU GLU SEQRES 2 B 296 ALA GLN THR GLN GLY PRO GLY SER MET ARG THR GLY MET SEQRES 3 B 296 LEU MET GLU GLY LYS LYS GLY VAL ILE ILE GLY VAL ALA SEQRES 4 B 296 ASN ASP LYS SER LEU ALA TRP GLY ILE ALA LYS ALA VAL SEQRES 5 B 296 CYS ALA GLN GLY ALA GLU VAL ALA LEU THR TYR LEU SER SEQRES 6 B 296 GLU THR PHE LYS LYS ARG VAL ASP PRO LEU ALA GLU SER SEQRES 7 B 296 LEU GLY VAL LYS LEU THR VAL PRO CYS ASP VAL SER ASP SEQRES 8 B 296 ALA GLU SER VAL ASP ASN MET PHE LYS VAL LEU ALA GLU SEQRES 9 B 296 GLU TRP GLY SER LEU ASP PHE VAL VAL HIS ALA VAL ALA SEQRES 10 B 296 PHE SER ASP LYS ASN GLU LEU LYS GLY ARG TYR VAL ASP SEQRES 11 B 296 THR SER LEU GLY ASN PHE LEU THR SER MET HIS ILE SER SEQRES 12 B 296 CYS TYR SER PHE THR TYR ILE ALA SER LYS ALA GLU PRO SEQRES 13 B 296 LEU MET THR ASN GLY GLY SER ILE LEU THR LEU SER TYR SEQRES 14 B 296 TYR GLY ALA GLU LYS VAL VAL PRO HIS TYR ASN VAL MET SEQRES 15 B 296 GLY VAL CYS LYS ALA ALA LEU GLU ALA SER VAL LYS TYR SEQRES 16 B 296 LEU ALA VAL ASP LEU GLY LYS GLN GLN ILE ARG VAL ASN SEQRES 17 B 296 ALA ILE SER ALA GLY PRO VAL ARG THR LEU ALA SER SER SEQRES 18 B 296 GLY ILE SER ASP PHE HIS TYR ILE LEU THR TRP ASN LYS SEQRES 19 B 296 TYR ASN SER PRO LEU ARG ARG ASN THR THR LEU ASP ASP SEQRES 20 B 296 VAL GLY GLY ALA ALA LEU TYR LEU LEU SER ASP LEU GLY SEQRES 21 B 296 ARG GLY THR THR GLY GLU THR VAL HIS VAL ASP CYS GLY SEQRES 22 B 296 TYR HIS VAL VAL GLY MET LYS SER VAL ASP ALA PRO ASP SEQRES 23 B 296 ILE SER ARG VAL LYS GLY ASP HIS SER VAL HET EDO A 400 4 HET EDO A 401 4 HET GOL A 300 6 HET GOL A 301 6 HET EDO B 400 4 HET EDO B 401 4 HET EDO B 402 4 HET GOL B 300 6 HET GOL B 301 6 HETNAM EDO 1,2-ETHANEDIOL HETNAM GOL GLYCEROL HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 EDO 5(C2 H6 O2) FORMUL 5 GOL 4(C3 H8 O3) FORMUL 12 HOH *323(H2 O) HELIX 1 1 SER A 22 GLN A 34 1 13 HELIX 2 2 SER A 44 THR A 46 5 3 HELIX 3 3 PHE A 47 GLY A 59 1 13 HELIX 4 4 ASP A 70 GLY A 86 1 17 HELIX 5 5 ASP A 99 LYS A 104 1 6 HELIX 6 6 GLY A 105 THR A 110 5 6 HELIX 7 7 SER A 111 CYS A 123 1 13 HELIX 8 8 CYS A 123 GLU A 134 1 12 HELIX 9 9 PRO A 135 MET A 137 5 3 HELIX 10 10 TYR A 148 GLU A 152 5 5 HELIX 11 11 ASN A 159 LYS A 181 1 23 HELIX 12 12 ILE A 202 SER A 216 1 15 HELIX 13 13 THR A 223 SER A 236 1 14 HELIX 14 14 ASP A 237 ARG A 240 5 4 HELIX 15 15 GLY A 252 VAL A 256 5 5 HELIX 16 16 SER B 22 GLN B 34 1 13 HELIX 17 17 SER B 44 THR B 46 5 3 HELIX 18 18 PHE B 47 GLY B 59 1 13 HELIX 19 19 ASP B 70 GLY B 86 1 17 HELIX 20 20 ASP B 99 GLY B 105 1 7 HELIX 21 21 ARG B 106 THR B 110 5 5 HELIX 22 22 SER B 111 CYS B 123 1 13 HELIX 23 23 CYS B 123 GLU B 134 1 12 HELIX 24 24 PRO B 135 MET B 137 5 3 HELIX 25 25 TYR B 148 GLU B 152 5 5 HELIX 26 26 TYR B 158 LYS B 181 1 24 HELIX 27 27 SER B 203 SER B 216 1 14 HELIX 28 28 THR B 223 SER B 236 1 14 HELIX 29 29 ASP B 237 ARG B 240 5 4 HELIX 30 30 GLY B 252 VAL B 256 5 5 SHEET 1 A 7 LEU A 62 PRO A 65 0 SHEET 2 A 7 GLU A 37 TYR A 42 1 N LEU A 40 O VAL A 64 SHEET 3 A 7 LYS A 11 ILE A 15 1 N ILE A 14 O ALA A 39 SHEET 4 A 7 PHE A 90 HIS A 93 1 O VAL A 92 N ILE A 15 SHEET 5 A 7 GLY A 141 SER A 147 1 O LEU A 144 N HIS A 93 SHEET 6 A 7 ILE A 184 ALA A 191 1 O ILE A 189 N SER A 147 SHEET 7 A 7 THR A 246 VAL A 249 1 O VAL A 249 N SER A 190 SHEET 1 B 7 LEU B 62 PRO B 65 0 SHEET 2 B 7 GLU B 37 TYR B 42 1 N LEU B 40 O VAL B 64 SHEET 3 B 7 LYS B 11 ILE B 15 1 N GLY B 12 O GLU B 37 SHEET 4 B 7 PHE B 90 HIS B 93 1 O VAL B 92 N ILE B 15 SHEET 5 B 7 GLY B 141 SER B 147 1 O LEU B 144 N HIS B 93 SHEET 6 B 7 ILE B 184 ALA B 191 1 O ILE B 189 N SER B 147 SHEET 7 B 7 THR B 246 VAL B 249 1 O VAL B 247 N ALA B 188 SITE 1 AC1 6 VAL A 68 HIS A 120 SER A 125 TYR A 128 SITE 2 AC1 6 HOH A 283 HOH A 403 SITE 1 AC2 5 VAL A 95 ALA A 96 LYS A 165 HOH A 315 SITE 2 AC2 5 HOH A 327 SITE 1 AC3 7 VAL B 68 SER B 69 ALA B 71 HIS B 120 SITE 2 AC3 7 SER B 125 TYR B 128 HOH B 311 SITE 1 AC4 5 VAL B 95 ALA B 96 LYS B 165 HOH B 290 SITE 2 AC4 5 HOH B 374 SITE 1 AC5 6 VAL A 154 MET B 258 LYS B 259 SER B 260 SITE 2 AC5 6 HOH B 344 HOH B 360 SITE 1 AC6 9 GLY A 105 ARG A 106 TYR A 107 ASN A 159 SITE 2 AC6 9 HOH A 314 HOH A 340 HOH A 344 VAL B 177 SITE 3 AC6 9 ASP B 178 SITE 1 AC7 7 GLY A 16 VAL A 17 THR A 41 TYR A 42 SITE 2 AC7 7 LEU A 43 CYS A 66 VAL A 68 SITE 1 AC8 9 VAL A 177 ASP A 178 HOH A 311 GLY B 105 SITE 2 AC8 9 ARG B 106 TYR B 107 PRO B 156 HIS B 157 SITE 3 AC8 9 ASN B 159 SITE 1 AC9 8 GLY B 16 THR B 41 TYR B 42 LEU B 43 SITE 2 AC9 8 CYS B 66 ASP B 67 VAL B 68 HOH B 434 CRYST1 80.000 89.400 78.500 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012500 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011186 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012739 0.00000