data_3K3F # _entry.id 3K3F # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3K3F pdb_00003k3f 10.2210/pdb3k3f/pdb RCSB RCSB055496 ? ? WWPDB D_1000055496 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-11-17 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 4 'Structure model' 1 3 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Source and taxonomy' 3 2 'Structure model' 'Version format compliance' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Refinement description' 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Database references' 8 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' diffrn 2 3 'Structure model' software 3 4 'Structure model' chem_comp_atom 4 4 'Structure model' chem_comp_bond 5 4 'Structure model' database_2 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_ref_seq_dif 8 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.contact_author' 3 3 'Structure model' '_software.contact_author_email' 4 3 'Structure model' '_software.date' 5 3 'Structure model' '_software.language' 6 3 'Structure model' '_software.location' 7 3 'Structure model' '_software.name' 8 3 'Structure model' '_software.type' 9 3 'Structure model' '_software.version' 10 4 'Structure model' '_database_2.pdbx_DOI' 11 4 'Structure model' '_database_2.pdbx_database_accession' 12 4 'Structure model' '_struct_conn.pdbx_dist_value' 13 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 14 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 15 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 16 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 17 4 'Structure model' '_struct_ref_seq_dif.details' 18 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 19 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 20 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 3K3F _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-10-02 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3K3G 'Crystal Structure of the Urea Transporter from Desulfovibrio Vulgaris Bound to N,N,-dimethylurea' unspecified TargetDB GO.3782 . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Levin, E.J.' 1 'Zhou, M.' 2 'New York Consortium on Membrane Protein Structure (NYCOMPS)' 3 # _citation.id primary _citation.title 'Crystal structure of a bacterial homologue of the kidney urea transporter.' _citation.journal_abbrev Nature _citation.journal_volume 462 _citation.page_first 757 _citation.page_last 761 _citation.year 2009 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19865084 _citation.pdbx_database_id_DOI 10.1038/nature08558 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Levin, E.J.' 1 ? primary 'Quick, M.' 2 ? primary 'Zhou, M.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Urea transporter' 36014.484 1 ? ? ? ? 2 non-polymer syn 'GOLD ION' 196.967 9 ? ? ? ? 3 water nat water 18.015 55 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SGRAFGEQLLKNPLIEFCDSVCRGCGQVMFQNNTVTGLLFFAGIFYNSTTLGVCAVLGTAASTLTAQLLGVDKPLVRAGL FGFNGTLAGIALPFFFNYEPAMLGYVALNGAFTTIIMASLLNFLGKWGVPALTAPFVLATWLLMFGVYKLSLFHPGALIA PALPSVAGLADMGTVTGRTFMEGLFKGVGEVMFQDNIVTGVIFVVAILVNSRISALFAVIGSLVGLCTALIMHSPETPVR LGLYGFNSVLCGIAMGGIFFYLNIRTFLYALGCMVLGAIATGAFSVLLSPIGMPALTWPFIVVTWLFLFAGSMFRNIAQV PTEKAGTPEDNLRSLAIGSR ; _entity_poly.pdbx_seq_one_letter_code_can ;SGRAFGEQLLKNPLIEFCDSVCRGCGQVMFQNNTVTGLLFFAGIFYNSTTLGVCAVLGTAASTLTAQLLGVDKPLVRAGL FGFNGTLAGIALPFFFNYEPAMLGYVALNGAFTTIIMASLLNFLGKWGVPALTAPFVLATWLLMFGVYKLSLFHPGALIA PALPSVAGLADMGTVTGRTFMEGLFKGVGEVMFQDNIVTGVIFVVAILVNSRISALFAVIGSLVGLCTALIMHSPETPVR LGLYGFNSVLCGIAMGGIFFYLNIRTFLYALGCMVLGAIATGAFSVLLSPIGMPALTWPFIVVTWLFLFAGSMFRNIAQV PTEKAGTPEDNLRSLAIGSR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier GO.3782 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'GOLD ION' AU 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 GLY n 1 3 ARG n 1 4 ALA n 1 5 PHE n 1 6 GLY n 1 7 GLU n 1 8 GLN n 1 9 LEU n 1 10 LEU n 1 11 LYS n 1 12 ASN n 1 13 PRO n 1 14 LEU n 1 15 ILE n 1 16 GLU n 1 17 PHE n 1 18 CYS n 1 19 ASP n 1 20 SER n 1 21 VAL n 1 22 CYS n 1 23 ARG n 1 24 GLY n 1 25 CYS n 1 26 GLY n 1 27 GLN n 1 28 VAL n 1 29 MET n 1 30 PHE n 1 31 GLN n 1 32 ASN n 1 33 ASN n 1 34 THR n 1 35 VAL n 1 36 THR n 1 37 GLY n 1 38 LEU n 1 39 LEU n 1 40 PHE n 1 41 PHE n 1 42 ALA n 1 43 GLY n 1 44 ILE n 1 45 PHE n 1 46 TYR n 1 47 ASN n 1 48 SER n 1 49 THR n 1 50 THR n 1 51 LEU n 1 52 GLY n 1 53 VAL n 1 54 CYS n 1 55 ALA n 1 56 VAL n 1 57 LEU n 1 58 GLY n 1 59 THR n 1 60 ALA n 1 61 ALA n 1 62 SER n 1 63 THR n 1 64 LEU n 1 65 THR n 1 66 ALA n 1 67 GLN n 1 68 LEU n 1 69 LEU n 1 70 GLY n 1 71 VAL n 1 72 ASP n 1 73 LYS n 1 74 PRO n 1 75 LEU n 1 76 VAL n 1 77 ARG n 1 78 ALA n 1 79 GLY n 1 80 LEU n 1 81 PHE n 1 82 GLY n 1 83 PHE n 1 84 ASN n 1 85 GLY n 1 86 THR n 1 87 LEU n 1 88 ALA n 1 89 GLY n 1 90 ILE n 1 91 ALA n 1 92 LEU n 1 93 PRO n 1 94 PHE n 1 95 PHE n 1 96 PHE n 1 97 ASN n 1 98 TYR n 1 99 GLU n 1 100 PRO n 1 101 ALA n 1 102 MET n 1 103 LEU n 1 104 GLY n 1 105 TYR n 1 106 VAL n 1 107 ALA n 1 108 LEU n 1 109 ASN n 1 110 GLY n 1 111 ALA n 1 112 PHE n 1 113 THR n 1 114 THR n 1 115 ILE n 1 116 ILE n 1 117 MET n 1 118 ALA n 1 119 SER n 1 120 LEU n 1 121 LEU n 1 122 ASN n 1 123 PHE n 1 124 LEU n 1 125 GLY n 1 126 LYS n 1 127 TRP n 1 128 GLY n 1 129 VAL n 1 130 PRO n 1 131 ALA n 1 132 LEU n 1 133 THR n 1 134 ALA n 1 135 PRO n 1 136 PHE n 1 137 VAL n 1 138 LEU n 1 139 ALA n 1 140 THR n 1 141 TRP n 1 142 LEU n 1 143 LEU n 1 144 MET n 1 145 PHE n 1 146 GLY n 1 147 VAL n 1 148 TYR n 1 149 LYS n 1 150 LEU n 1 151 SER n 1 152 LEU n 1 153 PHE n 1 154 HIS n 1 155 PRO n 1 156 GLY n 1 157 ALA n 1 158 LEU n 1 159 ILE n 1 160 ALA n 1 161 PRO n 1 162 ALA n 1 163 LEU n 1 164 PRO n 1 165 SER n 1 166 VAL n 1 167 ALA n 1 168 GLY n 1 169 LEU n 1 170 ALA n 1 171 ASP n 1 172 MET n 1 173 GLY n 1 174 THR n 1 175 VAL n 1 176 THR n 1 177 GLY n 1 178 ARG n 1 179 THR n 1 180 PHE n 1 181 MET n 1 182 GLU n 1 183 GLY n 1 184 LEU n 1 185 PHE n 1 186 LYS n 1 187 GLY n 1 188 VAL n 1 189 GLY n 1 190 GLU n 1 191 VAL n 1 192 MET n 1 193 PHE n 1 194 GLN n 1 195 ASP n 1 196 ASN n 1 197 ILE n 1 198 VAL n 1 199 THR n 1 200 GLY n 1 201 VAL n 1 202 ILE n 1 203 PHE n 1 204 VAL n 1 205 VAL n 1 206 ALA n 1 207 ILE n 1 208 LEU n 1 209 VAL n 1 210 ASN n 1 211 SER n 1 212 ARG n 1 213 ILE n 1 214 SER n 1 215 ALA n 1 216 LEU n 1 217 PHE n 1 218 ALA n 1 219 VAL n 1 220 ILE n 1 221 GLY n 1 222 SER n 1 223 LEU n 1 224 VAL n 1 225 GLY n 1 226 LEU n 1 227 CYS n 1 228 THR n 1 229 ALA n 1 230 LEU n 1 231 ILE n 1 232 MET n 1 233 HIS n 1 234 SER n 1 235 PRO n 1 236 GLU n 1 237 THR n 1 238 PRO n 1 239 VAL n 1 240 ARG n 1 241 LEU n 1 242 GLY n 1 243 LEU n 1 244 TYR n 1 245 GLY n 1 246 PHE n 1 247 ASN n 1 248 SER n 1 249 VAL n 1 250 LEU n 1 251 CYS n 1 252 GLY n 1 253 ILE n 1 254 ALA n 1 255 MET n 1 256 GLY n 1 257 GLY n 1 258 ILE n 1 259 PHE n 1 260 PHE n 1 261 TYR n 1 262 LEU n 1 263 ASN n 1 264 ILE n 1 265 ARG n 1 266 THR n 1 267 PHE n 1 268 LEU n 1 269 TYR n 1 270 ALA n 1 271 LEU n 1 272 GLY n 1 273 CYS n 1 274 MET n 1 275 VAL n 1 276 LEU n 1 277 GLY n 1 278 ALA n 1 279 ILE n 1 280 ALA n 1 281 THR n 1 282 GLY n 1 283 ALA n 1 284 PHE n 1 285 SER n 1 286 VAL n 1 287 LEU n 1 288 LEU n 1 289 SER n 1 290 PRO n 1 291 ILE n 1 292 GLY n 1 293 MET n 1 294 PRO n 1 295 ALA n 1 296 LEU n 1 297 THR n 1 298 TRP n 1 299 PRO n 1 300 PHE n 1 301 ILE n 1 302 VAL n 1 303 VAL n 1 304 THR n 1 305 TRP n 1 306 LEU n 1 307 PHE n 1 308 LEU n 1 309 PHE n 1 310 ALA n 1 311 GLY n 1 312 SER n 1 313 MET n 1 314 PHE n 1 315 ARG n 1 316 ASN n 1 317 ILE n 1 318 ALA n 1 319 GLN n 1 320 VAL n 1 321 PRO n 1 322 THR n 1 323 GLU n 1 324 LYS n 1 325 ALA n 1 326 GLY n 1 327 THR n 1 328 PRO n 1 329 GLU n 1 330 ASP n 1 331 ASN n 1 332 LEU n 1 333 ARG n 1 334 SER n 1 335 LEU n 1 336 ALA n 1 337 ILE n 1 338 GLY n 1 339 SER n 1 340 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene DVU_1160 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain Hildenborough _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Desulfovibrio vulgaris' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 882 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 AU non-polymer . 'GOLD ION' ? 'Au 1' 196.967 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -2 ? ? ? A . n A 1 2 GLY 2 -1 -1 GLY GLY A . n A 1 3 ARG 3 0 0 ARG ARG A . n A 1 4 ALA 4 1 1 ALA ALA A . n A 1 5 PHE 5 2 2 PHE PHE A . n A 1 6 GLY 6 3 3 GLY GLY A . n A 1 7 GLU 7 4 4 GLU GLU A . n A 1 8 GLN 8 5 5 GLN GLN A . n A 1 9 LEU 9 6 6 LEU LEU A . n A 1 10 LEU 10 7 7 LEU LEU A . n A 1 11 LYS 11 8 8 LYS LYS A . n A 1 12 ASN 12 9 9 ASN ASN A . n A 1 13 PRO 13 10 10 PRO PRO A . n A 1 14 LEU 14 11 11 LEU LEU A . n A 1 15 ILE 15 12 12 ILE ILE A . n A 1 16 GLU 16 13 13 GLU GLU A . n A 1 17 PHE 17 14 14 PHE PHE A . n A 1 18 CYS 18 15 15 CYS CYS A . n A 1 19 ASP 19 16 16 ASP ASP A . n A 1 20 SER 20 17 17 SER SER A . n A 1 21 VAL 21 18 18 VAL VAL A . n A 1 22 CYS 22 19 19 CYS CYS A . n A 1 23 ARG 23 20 20 ARG ARG A . n A 1 24 GLY 24 21 21 GLY GLY A . n A 1 25 CYS 25 22 22 CYS CYS A . n A 1 26 GLY 26 23 23 GLY GLY A . n A 1 27 GLN 27 24 24 GLN GLN A . n A 1 28 VAL 28 25 25 VAL VAL A . n A 1 29 MET 29 26 26 MET MET A . n A 1 30 PHE 30 27 27 PHE PHE A . n A 1 31 GLN 31 28 28 GLN GLN A . n A 1 32 ASN 32 29 29 ASN ASN A . n A 1 33 ASN 33 30 30 ASN ASN A . n A 1 34 THR 34 31 31 THR THR A . n A 1 35 VAL 35 32 32 VAL VAL A . n A 1 36 THR 36 33 33 THR THR A . n A 1 37 GLY 37 34 34 GLY GLY A . n A 1 38 LEU 38 35 35 LEU LEU A . n A 1 39 LEU 39 36 36 LEU LEU A . n A 1 40 PHE 40 37 37 PHE PHE A . n A 1 41 PHE 41 38 38 PHE PHE A . n A 1 42 ALA 42 39 39 ALA ALA A . n A 1 43 GLY 43 40 40 GLY GLY A . n A 1 44 ILE 44 41 41 ILE ILE A . n A 1 45 PHE 45 42 42 PHE PHE A . n A 1 46 TYR 46 43 43 TYR TYR A . n A 1 47 ASN 47 44 44 ASN ASN A . n A 1 48 SER 48 45 45 SER SER A . n A 1 49 THR 49 46 46 THR THR A . n A 1 50 THR 50 47 47 THR THR A . n A 1 51 LEU 51 48 48 LEU LEU A . n A 1 52 GLY 52 49 49 GLY GLY A . n A 1 53 VAL 53 50 50 VAL VAL A . n A 1 54 CYS 54 51 51 CYS CYS A . n A 1 55 ALA 55 52 52 ALA ALA A . n A 1 56 VAL 56 53 53 VAL VAL A . n A 1 57 LEU 57 54 54 LEU LEU A . n A 1 58 GLY 58 55 55 GLY GLY A . n A 1 59 THR 59 56 56 THR THR A . n A 1 60 ALA 60 57 57 ALA ALA A . n A 1 61 ALA 61 58 58 ALA ALA A . n A 1 62 SER 62 59 59 SER SER A . n A 1 63 THR 63 60 60 THR THR A . n A 1 64 LEU 64 61 61 LEU LEU A . n A 1 65 THR 65 62 62 THR THR A . n A 1 66 ALA 66 63 63 ALA ALA A . n A 1 67 GLN 67 64 64 GLN GLN A . n A 1 68 LEU 68 65 65 LEU LEU A . n A 1 69 LEU 69 66 66 LEU LEU A . n A 1 70 GLY 70 67 67 GLY GLY A . n A 1 71 VAL 71 68 68 VAL VAL A . n A 1 72 ASP 72 69 69 ASP ASP A . n A 1 73 LYS 73 70 70 LYS LYS A . n A 1 74 PRO 74 71 71 PRO PRO A . n A 1 75 LEU 75 72 72 LEU LEU A . n A 1 76 VAL 76 73 73 VAL VAL A . n A 1 77 ARG 77 74 74 ARG ARG A . n A 1 78 ALA 78 75 75 ALA ALA A . n A 1 79 GLY 79 76 76 GLY GLY A . n A 1 80 LEU 80 77 77 LEU LEU A . n A 1 81 PHE 81 78 78 PHE PHE A . n A 1 82 GLY 82 79 79 GLY GLY A . n A 1 83 PHE 83 80 80 PHE PHE A . n A 1 84 ASN 84 81 81 ASN ASN A . n A 1 85 GLY 85 82 82 GLY GLY A . n A 1 86 THR 86 83 83 THR THR A . n A 1 87 LEU 87 84 84 LEU LEU A . n A 1 88 ALA 88 85 85 ALA ALA A . n A 1 89 GLY 89 86 86 GLY GLY A . n A 1 90 ILE 90 87 87 ILE ILE A . n A 1 91 ALA 91 88 88 ALA ALA A . n A 1 92 LEU 92 89 89 LEU LEU A . n A 1 93 PRO 93 90 90 PRO PRO A . n A 1 94 PHE 94 91 91 PHE PHE A . n A 1 95 PHE 95 92 92 PHE PHE A . n A 1 96 PHE 96 93 93 PHE PHE A . n A 1 97 ASN 97 94 94 ASN ASN A . n A 1 98 TYR 98 95 95 TYR TYR A . n A 1 99 GLU 99 96 96 GLU GLU A . n A 1 100 PRO 100 97 97 PRO PRO A . n A 1 101 ALA 101 98 98 ALA ALA A . n A 1 102 MET 102 99 99 MET MET A . n A 1 103 LEU 103 100 100 LEU LEU A . n A 1 104 GLY 104 101 101 GLY GLY A . n A 1 105 TYR 105 102 102 TYR TYR A . n A 1 106 VAL 106 103 103 VAL VAL A . n A 1 107 ALA 107 104 104 ALA ALA A . n A 1 108 LEU 108 105 105 LEU LEU A . n A 1 109 ASN 109 106 106 ASN ASN A . n A 1 110 GLY 110 107 107 GLY GLY A . n A 1 111 ALA 111 108 108 ALA ALA A . n A 1 112 PHE 112 109 109 PHE PHE A . n A 1 113 THR 113 110 110 THR THR A . n A 1 114 THR 114 111 111 THR THR A . n A 1 115 ILE 115 112 112 ILE ILE A . n A 1 116 ILE 116 113 113 ILE ILE A . n A 1 117 MET 117 114 114 MET MET A . n A 1 118 ALA 118 115 115 ALA ALA A . n A 1 119 SER 119 116 116 SER SER A . n A 1 120 LEU 120 117 117 LEU LEU A . n A 1 121 LEU 121 118 118 LEU LEU A . n A 1 122 ASN 122 119 119 ASN ASN A . n A 1 123 PHE 123 120 120 PHE PHE A . n A 1 124 LEU 124 121 121 LEU LEU A . n A 1 125 GLY 125 122 122 GLY GLY A . n A 1 126 LYS 126 123 123 LYS LYS A . n A 1 127 TRP 127 124 124 TRP TRP A . n A 1 128 GLY 128 125 125 GLY GLY A . n A 1 129 VAL 129 126 126 VAL VAL A . n A 1 130 PRO 130 127 127 PRO PRO A . n A 1 131 ALA 131 128 128 ALA ALA A . n A 1 132 LEU 132 129 129 LEU LEU A . n A 1 133 THR 133 130 130 THR THR A . n A 1 134 ALA 134 131 131 ALA ALA A . n A 1 135 PRO 135 132 132 PRO PRO A . n A 1 136 PHE 136 133 133 PHE PHE A . n A 1 137 VAL 137 134 134 VAL VAL A . n A 1 138 LEU 138 135 135 LEU LEU A . n A 1 139 ALA 139 136 136 ALA ALA A . n A 1 140 THR 140 137 137 THR THR A . n A 1 141 TRP 141 138 138 TRP TRP A . n A 1 142 LEU 142 139 139 LEU LEU A . n A 1 143 LEU 143 140 140 LEU LEU A . n A 1 144 MET 144 141 141 MET MET A . n A 1 145 PHE 145 142 142 PHE PHE A . n A 1 146 GLY 146 143 143 GLY GLY A . n A 1 147 VAL 147 144 144 VAL VAL A . n A 1 148 TYR 148 145 145 TYR TYR A . n A 1 149 LYS 149 146 146 LYS LYS A . n A 1 150 LEU 150 147 147 LEU LEU A . n A 1 151 SER 151 148 148 SER SER A . n A 1 152 LEU 152 149 149 LEU LEU A . n A 1 153 PHE 153 150 150 PHE PHE A . n A 1 154 HIS 154 151 151 HIS HIS A . n A 1 155 PRO 155 152 152 PRO PRO A . n A 1 156 GLY 156 153 153 GLY GLY A . n A 1 157 ALA 157 154 154 ALA ALA A . n A 1 158 LEU 158 155 155 LEU LEU A . n A 1 159 ILE 159 156 156 ILE ILE A . n A 1 160 ALA 160 157 157 ALA ALA A . n A 1 161 PRO 161 158 158 PRO PRO A . n A 1 162 ALA 162 159 159 ALA ALA A . n A 1 163 LEU 163 160 160 LEU LEU A . n A 1 164 PRO 164 161 161 PRO PRO A . n A 1 165 SER 165 162 162 SER SER A . n A 1 166 VAL 166 163 163 VAL VAL A . n A 1 167 ALA 167 164 ? ? ? A . n A 1 168 GLY 168 165 ? ? ? A . n A 1 169 LEU 169 166 ? ? ? A . n A 1 170 ALA 170 167 ? ? ? A . n A 1 171 ASP 171 168 168 ASP ASP A . n A 1 172 MET 172 169 169 MET MET A . n A 1 173 GLY 173 170 170 GLY GLY A . n A 1 174 THR 174 171 171 THR THR A . n A 1 175 VAL 175 172 172 VAL VAL A . n A 1 176 THR 176 173 173 THR THR A . n A 1 177 GLY 177 174 174 GLY GLY A . n A 1 178 ARG 178 175 175 ARG ARG A . n A 1 179 THR 179 176 176 THR THR A . n A 1 180 PHE 180 177 177 PHE PHE A . n A 1 181 MET 181 178 178 MET MET A . n A 1 182 GLU 182 179 179 GLU GLU A . n A 1 183 GLY 183 180 180 GLY GLY A . n A 1 184 LEU 184 181 181 LEU LEU A . n A 1 185 PHE 185 182 182 PHE PHE A . n A 1 186 LYS 186 183 183 LYS LYS A . n A 1 187 GLY 187 184 184 GLY GLY A . n A 1 188 VAL 188 185 185 VAL VAL A . n A 1 189 GLY 189 186 186 GLY GLY A . n A 1 190 GLU 190 187 187 GLU GLU A . n A 1 191 VAL 191 188 188 VAL VAL A . n A 1 192 MET 192 189 189 MET MET A . n A 1 193 PHE 193 190 190 PHE PHE A . n A 1 194 GLN 194 191 191 GLN GLN A . n A 1 195 ASP 195 192 192 ASP ASP A . n A 1 196 ASN 196 193 193 ASN ASN A . n A 1 197 ILE 197 194 194 ILE ILE A . n A 1 198 VAL 198 195 195 VAL VAL A . n A 1 199 THR 199 196 196 THR THR A . n A 1 200 GLY 200 197 197 GLY GLY A . n A 1 201 VAL 201 198 198 VAL VAL A . n A 1 202 ILE 202 199 199 ILE ILE A . n A 1 203 PHE 203 200 200 PHE PHE A . n A 1 204 VAL 204 201 201 VAL VAL A . n A 1 205 VAL 205 202 202 VAL VAL A . n A 1 206 ALA 206 203 203 ALA ALA A . n A 1 207 ILE 207 204 204 ILE ILE A . n A 1 208 LEU 208 205 205 LEU LEU A . n A 1 209 VAL 209 206 206 VAL VAL A . n A 1 210 ASN 210 207 207 ASN ASN A . n A 1 211 SER 211 208 208 SER SER A . n A 1 212 ARG 212 209 209 ARG ARG A . n A 1 213 ILE 213 210 210 ILE ILE A . n A 1 214 SER 214 211 211 SER SER A . n A 1 215 ALA 215 212 212 ALA ALA A . n A 1 216 LEU 216 213 213 LEU LEU A . n A 1 217 PHE 217 214 214 PHE PHE A . n A 1 218 ALA 218 215 215 ALA ALA A . n A 1 219 VAL 219 216 216 VAL VAL A . n A 1 220 ILE 220 217 217 ILE ILE A . n A 1 221 GLY 221 218 218 GLY GLY A . n A 1 222 SER 222 219 219 SER SER A . n A 1 223 LEU 223 220 220 LEU LEU A . n A 1 224 VAL 224 221 221 VAL VAL A . n A 1 225 GLY 225 222 222 GLY GLY A . n A 1 226 LEU 226 223 223 LEU LEU A . n A 1 227 CYS 227 224 224 CYS CYS A . n A 1 228 THR 228 225 225 THR THR A . n A 1 229 ALA 229 226 226 ALA ALA A . n A 1 230 LEU 230 227 227 LEU LEU A . n A 1 231 ILE 231 228 228 ILE ILE A . n A 1 232 MET 232 229 229 MET MET A . n A 1 233 HIS 233 230 230 HIS HIS A . n A 1 234 SER 234 231 231 SER SER A . n A 1 235 PRO 235 232 232 PRO PRO A . n A 1 236 GLU 236 233 233 GLU GLU A . n A 1 237 THR 237 234 234 THR THR A . n A 1 238 PRO 238 235 235 PRO PRO A . n A 1 239 VAL 239 236 236 VAL VAL A . n A 1 240 ARG 240 237 237 ARG ARG A . n A 1 241 LEU 241 238 238 LEU LEU A . n A 1 242 GLY 242 239 239 GLY GLY A . n A 1 243 LEU 243 240 240 LEU LEU A . n A 1 244 TYR 244 241 241 TYR TYR A . n A 1 245 GLY 245 242 242 GLY GLY A . n A 1 246 PHE 246 243 243 PHE PHE A . n A 1 247 ASN 247 244 244 ASN ASN A . n A 1 248 SER 248 245 245 SER SER A . n A 1 249 VAL 249 246 246 VAL VAL A . n A 1 250 LEU 250 247 247 LEU LEU A . n A 1 251 CYS 251 248 248 CYS CYS A . n A 1 252 GLY 252 249 249 GLY GLY A . n A 1 253 ILE 253 250 250 ILE ILE A . n A 1 254 ALA 254 251 251 ALA ALA A . n A 1 255 MET 255 252 252 MET MET A . n A 1 256 GLY 256 253 253 GLY GLY A . n A 1 257 GLY 257 254 254 GLY GLY A . n A 1 258 ILE 258 255 255 ILE ILE A . n A 1 259 PHE 259 256 256 PHE PHE A . n A 1 260 PHE 260 257 257 PHE PHE A . n A 1 261 TYR 261 258 258 TYR TYR A . n A 1 262 LEU 262 259 259 LEU LEU A . n A 1 263 ASN 263 260 260 ASN ASN A . n A 1 264 ILE 264 261 261 ILE ILE A . n A 1 265 ARG 265 262 262 ARG ARG A . n A 1 266 THR 266 263 263 THR THR A . n A 1 267 PHE 267 264 264 PHE PHE A . n A 1 268 LEU 268 265 265 LEU LEU A . n A 1 269 TYR 269 266 266 TYR TYR A . n A 1 270 ALA 270 267 267 ALA ALA A . n A 1 271 LEU 271 268 268 LEU LEU A . n A 1 272 GLY 272 269 269 GLY GLY A . n A 1 273 CYS 273 270 270 CYS CYS A . n A 1 274 MET 274 271 271 MET MET A . n A 1 275 VAL 275 272 272 VAL VAL A . n A 1 276 LEU 276 273 273 LEU LEU A . n A 1 277 GLY 277 274 274 GLY GLY A . n A 1 278 ALA 278 275 275 ALA ALA A . n A 1 279 ILE 279 276 276 ILE ILE A . n A 1 280 ALA 280 277 277 ALA ALA A . n A 1 281 THR 281 278 278 THR THR A . n A 1 282 GLY 282 279 279 GLY GLY A . n A 1 283 ALA 283 280 280 ALA ALA A . n A 1 284 PHE 284 281 281 PHE PHE A . n A 1 285 SER 285 282 282 SER SER A . n A 1 286 VAL 286 283 283 VAL VAL A . n A 1 287 LEU 287 284 284 LEU LEU A . n A 1 288 LEU 288 285 285 LEU LEU A . n A 1 289 SER 289 286 286 SER SER A . n A 1 290 PRO 290 287 287 PRO PRO A . n A 1 291 ILE 291 288 288 ILE ILE A . n A 1 292 GLY 292 289 289 GLY GLY A . n A 1 293 MET 293 290 290 MET MET A . n A 1 294 PRO 294 291 291 PRO PRO A . n A 1 295 ALA 295 292 292 ALA ALA A . n A 1 296 LEU 296 293 293 LEU LEU A . n A 1 297 THR 297 294 294 THR THR A . n A 1 298 TRP 298 295 295 TRP TRP A . n A 1 299 PRO 299 296 296 PRO PRO A . n A 1 300 PHE 300 297 297 PHE PHE A . n A 1 301 ILE 301 298 298 ILE ILE A . n A 1 302 VAL 302 299 299 VAL VAL A . n A 1 303 VAL 303 300 300 VAL VAL A . n A 1 304 THR 304 301 301 THR THR A . n A 1 305 TRP 305 302 302 TRP TRP A . n A 1 306 LEU 306 303 303 LEU LEU A . n A 1 307 PHE 307 304 304 PHE PHE A . n A 1 308 LEU 308 305 305 LEU LEU A . n A 1 309 PHE 309 306 306 PHE PHE A . n A 1 310 ALA 310 307 307 ALA ALA A . n A 1 311 GLY 311 308 308 GLY GLY A . n A 1 312 SER 312 309 309 SER SER A . n A 1 313 MET 313 310 310 MET MET A . n A 1 314 PHE 314 311 311 PHE PHE A . n A 1 315 ARG 315 312 312 ARG ARG A . n A 1 316 ASN 316 313 313 ASN ASN A . n A 1 317 ILE 317 314 314 ILE ILE A . n A 1 318 ALA 318 315 315 ALA ALA A . n A 1 319 GLN 319 316 316 GLN GLN A . n A 1 320 VAL 320 317 317 VAL VAL A . n A 1 321 PRO 321 318 318 PRO PRO A . n A 1 322 THR 322 319 319 THR THR A . n A 1 323 GLU 323 320 320 GLU GLU A . n A 1 324 LYS 324 321 321 LYS LYS A . n A 1 325 ALA 325 322 322 ALA ALA A . n A 1 326 GLY 326 323 323 GLY GLY A . n A 1 327 THR 327 324 324 THR THR A . n A 1 328 PRO 328 325 325 PRO PRO A . n A 1 329 GLU 329 326 326 GLU GLU A . n A 1 330 ASP 330 327 327 ASP ASP A . n A 1 331 ASN 331 328 328 ASN ASN A . n A 1 332 LEU 332 329 329 LEU LEU A . n A 1 333 ARG 333 330 330 ARG ARG A . n A 1 334 SER 334 331 331 SER SER A . n A 1 335 LEU 335 332 332 LEU LEU A . n A 1 336 ALA 336 333 333 ALA ALA A . n A 1 337 ILE 337 334 334 ILE ILE A . n A 1 338 GLY 338 335 ? ? ? A . n A 1 339 SER 339 336 ? ? ? A . n A 1 340 ARG 340 337 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AU 1 338 1 AU AU A . C 2 AU 1 339 2 AU AU A . D 2 AU 1 340 3 AU AU A . E 2 AU 1 341 4 AU AU A . F 2 AU 1 342 5 AU AU A . G 2 AU 1 343 6 AU AU A . H 2 AU 1 344 7 AU AU A . I 2 AU 1 345 8 AU AU A . J 2 AU 1 346 9 AU AU A . K 3 HOH 1 347 1 HOH HOH A . K 3 HOH 2 348 2 HOH HOH A . K 3 HOH 3 349 3 HOH HOH A . K 3 HOH 4 350 4 HOH HOH A . K 3 HOH 5 351 5 HOH HOH A . K 3 HOH 6 352 6 HOH HOH A . K 3 HOH 7 353 7 HOH HOH A . K 3 HOH 8 354 8 HOH HOH A . K 3 HOH 9 355 9 HOH HOH A . K 3 HOH 10 356 10 HOH HOH A . K 3 HOH 11 357 11 HOH HOH A . K 3 HOH 12 358 12 HOH HOH A . K 3 HOH 13 359 13 HOH HOH A . K 3 HOH 14 360 14 HOH HOH A . K 3 HOH 15 361 15 HOH HOH A . K 3 HOH 16 362 16 HOH HOH A . K 3 HOH 17 363 17 HOH HOH A . K 3 HOH 18 364 18 HOH HOH A . K 3 HOH 19 365 19 HOH HOH A . K 3 HOH 20 366 20 HOH HOH A . K 3 HOH 21 367 21 HOH HOH A . K 3 HOH 22 368 23 HOH HOH A . K 3 HOH 23 369 24 HOH HOH A . K 3 HOH 24 370 25 HOH HOH A . K 3 HOH 25 371 26 HOH HOH A . K 3 HOH 26 372 27 HOH HOH A . K 3 HOH 27 373 28 HOH HOH A . K 3 HOH 28 374 29 HOH HOH A . K 3 HOH 29 375 30 HOH HOH A . K 3 HOH 30 376 31 HOH HOH A . K 3 HOH 31 377 32 HOH HOH A . K 3 HOH 32 378 33 HOH HOH A . K 3 HOH 33 379 34 HOH HOH A . K 3 HOH 34 380 35 HOH HOH A . K 3 HOH 35 381 36 HOH HOH A . K 3 HOH 36 382 37 HOH HOH A . K 3 HOH 37 383 38 HOH HOH A . K 3 HOH 38 384 39 HOH HOH A . K 3 HOH 39 385 40 HOH HOH A . K 3 HOH 40 386 41 HOH HOH A . K 3 HOH 41 387 42 HOH HOH A . K 3 HOH 42 388 43 HOH HOH A . K 3 HOH 43 389 44 HOH HOH A . K 3 HOH 44 390 45 HOH HOH A . K 3 HOH 45 391 46 HOH HOH A . K 3 HOH 46 392 47 HOH HOH A . K 3 HOH 47 393 48 HOH HOH A . K 3 HOH 48 394 49 HOH HOH A . K 3 HOH 49 395 50 HOH HOH A . K 3 HOH 50 396 51 HOH HOH A . K 3 HOH 51 397 52 HOH HOH A . K 3 HOH 52 398 53 HOH HOH A . K 3 HOH 53 399 54 HOH HOH A . K 3 HOH 54 400 55 HOH HOH A . K 3 HOH 55 401 56 HOH HOH A . # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 4 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 5 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 HKL-2000 . ? ? ? ? 'data collection' ? ? ? 7 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 8 SOLVE . ? ? ? ? phasing ? ? ? # _cell.length_a 110.131 _cell.length_b 110.131 _cell.length_c 84.861 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 3K3F _cell.pdbx_unique_axis ? _cell.Z_PDB 6 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 63' _symmetry.entry_id 3K3F _symmetry.Int_Tables_number 173 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 2 _exptl.entry_id 3K3F _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 4.14 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 70.25 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details '23% PEG 1500, 100 mM Na Cacodylate, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 100 ? 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2009-05-02 _diffrn_detector.details ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.monochromator _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.pdbx_scattering_type 1 'SINGLE WAVELENGTH' 'Si(111)' 1 ? x-ray 2 'SINGLE WAVELENGTH' 'Si(111)' 1 ? x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.01 1.0 2 1.04 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_wavelength_list _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline 1 SYNCHROTRON 'NSLS BEAMLINE X29A' 1.01 ? NSLS X29A 2 SYNCHROTRON 'NSLS BEAMLINE X29A' 1.04 ? NSLS X29A # _reflns.entry_id 3K3F _reflns.d_resolution_high 2.300 _reflns.d_resolution_low 50.000 _reflns.number_obs 25924 _reflns.pdbx_Rmerge_I_obs 0.089 _reflns.pdbx_netI_over_sigmaI 14.400 _reflns.pdbx_chi_squared 1.204 _reflns.pdbx_redundancy 8.200 _reflns.percent_possible_obs 99.400 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all 26094 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1,2 # _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.34 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.964 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 0.971 _reflns_shell.pdbx_redundancy 5.20 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1214 _reflns_shell.percent_possible_all 95.20 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1,2 # _refine.entry_id 3K3F _refine.ls_d_res_high 2.300 _refine.ls_d_res_low 38.780 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.210 _refine.ls_number_reflns_obs 25854 _refine.ls_number_reflns_all 25854 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all 0.180 _refine.ls_R_factor_obs 0.180 _refine.ls_R_factor_R_work 0.179 _refine.ls_wR_factor_R_work 0.201 _refine.ls_R_factor_R_free 0.204 _refine.ls_wR_factor_R_free 0.213 _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 1293 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 48.581 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.700 _refine.aniso_B[2][2] 0.700 _refine.aniso_B[3][3] -1.050 _refine.aniso_B[1][2] 0.350 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.960 _refine.correlation_coeff_Fo_to_Fc_free 0.944 _refine.overall_SU_R_Cruickshank_DPI 0.192 _refine.overall_SU_R_free 0.162 _refine.pdbx_overall_ESU_R 0.177 _refine.pdbx_overall_ESU_R_Free 0.154 _refine.overall_SU_ML 0.111 _refine.overall_SU_B 8.860 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.882 _refine.B_iso_max 132.60 _refine.B_iso_min 30.20 _refine.occupancy_max 1.00 _refine.occupancy_min 0.25 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2485 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 9 _refine_hist.number_atoms_solvent 55 _refine_hist.number_atoms_total 2549 _refine_hist.d_res_high 2.300 _refine_hist.d_res_low 38.780 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 2546 0.018 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 3467 1.469 1.970 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 330 6.040 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 85 39.836 22.824 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 386 17.030 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 9 14.560 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 414 0.100 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1879 0.006 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 1336 0.209 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 1816 0.310 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 101 0.133 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 79 0.204 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 6 0.103 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1681 0.767 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2624 1.283 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 995 2.183 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 843 3.204 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.30 _refine_ls_shell.d_res_low 2.361 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 95.690 _refine_ls_shell.number_reflns_R_work 1743 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.231 _refine_ls_shell.R_factor_R_free 0.278 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 76 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1819 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3K3F _struct.title 'Crystal Structure of the Urea Transporter from Desulfovibrio Vulgaris' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3K3F _struct_keywords.text ;Membrane protein, channel, urea transport, transporter, TRANSPORT PROTEIN, Structural Genomics, PSI-2, Protein Structure Initiative, New York Consortium on Membrane Protein Structure, NYCOMPS ; _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 2 ? J N N 2 ? K N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q72CX3_DESVH _struct_ref.pdbx_db_accession Q72CX3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;FGEQLLKNPLIEFCDSVCRGCGQVMFQNNTVTGLLFFAGIFYNSTTLGVCAVLGTAASTLTAQLLGVDKPLVRAGLFGFN GTLAGIALPFFFNYEPAMLGYVALNGAFTTIIMASLLNFLGKWGVPALTAPFVLATWLLMFGVYKLSLFHPGALIAPALP SVAGLADMGTVTGRTFMEGLFKGVGEVMFQDNIVTGVIFVVAILVNSRISALFAVIGSLVGLCTALIMHSPETPVRLGLY GFNSVLCGIAMGGIFFYLNIRTFLYALGCMVLGAIATGAFSVLLSPIGMPALTWPFIVVTWLFLFAGSMFRNIAQVPTEK AGTPEDNLRSLAIGSR ; _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3K3F _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 5 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 340 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q72CX3 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 337 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 337 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3K3F SER A 1 ? UNP Q72CX3 ? ? 'expression tag' -2 1 1 3K3F GLY A 2 ? UNP Q72CX3 ? ? 'expression tag' -1 2 1 3K3F ARG A 3 ? UNP Q72CX3 ? ? 'expression tag' 0 3 1 3K3F ALA A 4 ? UNP Q72CX3 ? ? 'expression tag' 1 4 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 10150 ? 1 MORE -107 ? 1 'SSA (A^2)' 35890 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_545 -y,x-y-1,z -0.5000000000 -0.8660254038 0.0000000000 55.0655000000 0.8660254038 -0.5000000000 0.0000000000 -95.3762437442 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_655 -x+y+1,-x,z -0.5000000000 0.8660254038 0.0000000000 110.1310000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 4 ? LYS A 11 ? ALA A 1 LYS A 8 5 ? 8 HELX_P HELX_P2 2 ASN A 12 ? GLN A 27 ? ASN A 9 GLN A 24 1 ? 16 HELX_P HELX_P3 3 VAL A 28 ? PHE A 30 ? VAL A 25 PHE A 27 5 ? 3 HELX_P HELX_P4 4 ASN A 33 ? SER A 48 ? ASN A 30 SER A 45 1 ? 16 HELX_P HELX_P5 5 SER A 48 ? GLY A 70 ? SER A 45 GLY A 67 1 ? 23 HELX_P HELX_P6 6 ASP A 72 ? ALA A 78 ? ASP A 69 ALA A 75 1 ? 7 HELX_P HELX_P7 7 GLY A 82 ? PHE A 96 ? GLY A 79 PHE A 93 1 ? 15 HELX_P HELX_P8 8 ALA A 101 ? LYS A 126 ? ALA A 98 LYS A 123 1 ? 26 HELX_P HELX_P9 9 THR A 133 ? PHE A 145 ? THR A 130 PHE A 142 1 ? 13 HELX_P HELX_P10 10 GLY A 146 ? LYS A 149 ? GLY A 143 LYS A 146 5 ? 4 HELX_P HELX_P11 11 THR A 176 ? GLU A 190 ? THR A 173 GLU A 187 1 ? 15 HELX_P HELX_P12 12 VAL A 191 ? PHE A 193 ? VAL A 188 PHE A 190 5 ? 3 HELX_P HELX_P13 13 ASN A 196 ? SER A 211 ? ASN A 193 SER A 208 1 ? 16 HELX_P HELX_P14 14 SER A 211 ? MET A 232 ? SER A 208 MET A 229 1 ? 22 HELX_P HELX_P15 15 PRO A 235 ? LEU A 241 ? PRO A 232 LEU A 238 1 ? 7 HELX_P HELX_P16 16 GLY A 245 ? GLY A 256 ? GLY A 242 GLY A 253 1 ? 12 HELX_P HELX_P17 17 ASN A 263 ? LEU A 288 ? ASN A 260 LEU A 285 1 ? 26 HELX_P HELX_P18 18 SER A 289 ? GLY A 292 ? SER A 286 GLY A 289 5 ? 4 HELX_P HELX_P19 19 THR A 297 ? SER A 312 ? THR A 294 SER A 309 1 ? 16 HELX_P HELX_P20 20 THR A 327 ? ALA A 336 ? THR A 324 ALA A 333 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 18 O ? ? ? 1_555 D AU . AU ? ? A CYS 15 A AU 340 1_555 ? ? ? ? ? ? ? 2.252 ? ? metalc2 metalc ? ? A CYS 18 SG ? ? ? 1_555 D AU . AU ? ? A CYS 15 A AU 340 1_555 ? ? ? ? ? ? ? 2.091 ? ? metalc3 metalc ? ? A CYS 18 SG ? ? ? 1_555 J AU . AU ? ? A CYS 15 A AU 346 1_555 ? ? ? ? ? ? ? 2.257 ? ? metalc4 metalc ? ? A CYS 22 SG ? ? ? 1_555 C AU . AU ? ? A CYS 19 A AU 339 1_555 ? ? ? ? ? ? ? 2.588 ? ? metalc5 metalc ? ? A CYS 22 SG ? ? ? 1_555 D AU . AU ? ? A CYS 19 A AU 340 1_555 ? ? ? ? ? ? ? 2.332 ? ? metalc6 metalc ? ? A CYS 54 SG ? ? ? 1_555 E AU . AU ? ? A CYS 51 A AU 341 1_555 ? ? ? ? ? ? ? 2.567 ? ? metalc7 metalc ? ? A CYS 54 SG ? ? ? 1_555 G AU . AU ? ? A CYS 51 A AU 343 1_555 ? ? ? ? ? ? ? 2.050 ? ? metalc8 metalc ? ? A CYS 227 SG ? ? ? 1_555 F AU . AU ? ? A CYS 224 A AU 342 1_555 ? ? ? ? ? ? ? 2.643 ? ? metalc9 metalc ? ? A CYS 227 SG ? ? ? 1_555 H AU . AU ? ? A CYS 224 A AU 344 1_555 ? ? ? ? ? ? ? 1.696 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A CYS 18 ? A CYS 15 ? 1_555 AU ? D AU . ? A AU 340 ? 1_555 SG ? A CYS 18 ? A CYS 15 ? 1_555 80.1 ? 2 O ? A CYS 18 ? A CYS 15 ? 1_555 AU ? D AU . ? A AU 340 ? 1_555 SG ? A CYS 22 ? A CYS 19 ? 1_555 104.8 ? 3 SG ? A CYS 18 ? A CYS 15 ? 1_555 AU ? D AU . ? A AU 340 ? 1_555 SG ? A CYS 22 ? A CYS 19 ? 1_555 161.2 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A AU 338 ? 1 'BINDING SITE FOR RESIDUE AU A 338' AC2 Software A AU 339 ? 4 'BINDING SITE FOR RESIDUE AU A 339' AC3 Software A AU 340 ? 5 'BINDING SITE FOR RESIDUE AU A 340' AC4 Software A AU 341 ? 5 'BINDING SITE FOR RESIDUE AU A 341' AC5 Software A AU 342 ? 2 'BINDING SITE FOR RESIDUE AU A 342' AC6 Software A AU 343 ? 3 'BINDING SITE FOR RESIDUE AU A 343' AC7 Software A AU 344 ? 2 'BINDING SITE FOR RESIDUE AU A 344' AC8 Software A AU 345 ? 5 'BINDING SITE FOR RESIDUE AU A 345' AC9 Software A AU 346 ? 3 'BINDING SITE FOR RESIDUE AU A 346' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 1 GLN A 27 ? GLN A 24 . ? 1_555 ? 2 AC2 4 CYS A 22 ? CYS A 19 . ? 1_555 ? 3 AC2 4 THR A 34 ? THR A 31 . ? 1_555 ? 4 AC2 4 AU D . ? AU A 340 . ? 1_555 ? 5 AC2 4 AU I . ? AU A 345 . ? 1_555 ? 6 AC3 5 CYS A 18 ? CYS A 15 . ? 1_555 ? 7 AC3 5 CYS A 22 ? CYS A 19 . ? 1_555 ? 8 AC3 5 AU C . ? AU A 339 . ? 1_555 ? 9 AC3 5 AU I . ? AU A 345 . ? 1_555 ? 10 AC3 5 AU J . ? AU A 346 . ? 1_555 ? 11 AC4 5 THR A 50 ? THR A 47 . ? 1_555 ? 12 AC4 5 VAL A 53 ? VAL A 50 . ? 1_555 ? 13 AC4 5 CYS A 54 ? CYS A 51 . ? 1_555 ? 14 AC4 5 LEU A 103 ? LEU A 100 . ? 1_555 ? 15 AC4 5 AU G . ? AU A 343 . ? 1_555 ? 16 AC5 2 CYS A 227 ? CYS A 224 . ? 1_555 ? 17 AC5 2 AU H . ? AU A 344 . ? 1_555 ? 18 AC6 3 CYS A 54 ? CYS A 51 . ? 1_555 ? 19 AC6 3 PRO A 93 ? PRO A 90 . ? 1_555 ? 20 AC6 3 AU E . ? AU A 341 . ? 1_555 ? 21 AC7 2 CYS A 227 ? CYS A 224 . ? 1_555 ? 22 AC7 2 AU F . ? AU A 342 . ? 1_555 ? 23 AC8 5 CYS A 18 ? CYS A 15 . ? 1_555 ? 24 AC8 5 ASP A 19 ? ASP A 16 . ? 1_555 ? 25 AC8 5 AU C . ? AU A 339 . ? 1_555 ? 26 AC8 5 AU D . ? AU A 340 . ? 1_555 ? 27 AC8 5 AU J . ? AU A 346 . ? 1_555 ? 28 AC9 3 CYS A 18 ? CYS A 15 . ? 1_555 ? 29 AC9 3 AU D . ? AU A 340 . ? 1_555 ? 30 AC9 3 AU I . ? AU A 345 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A ILE 314 ? ? O A HOH 347 ? ? 2.14 2 1 O A HOH 378 ? ? O A HOH 393 ? ? 2.15 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CB _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 CYS _pdbx_validate_rmsd_bond.auth_seq_id_1 224 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 SG _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 CYS _pdbx_validate_rmsd_bond.auth_seq_id_2 224 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 2.148 _pdbx_validate_rmsd_bond.bond_target_value 1.818 _pdbx_validate_rmsd_bond.bond_deviation 0.330 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.017 _pdbx_validate_rmsd_bond.linker_flag N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CA _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 CYS _pdbx_validate_rmsd_angle.auth_seq_id_1 224 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CB _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 CYS _pdbx_validate_rmsd_angle.auth_seq_id_2 224 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 SG _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 CYS _pdbx_validate_rmsd_angle.auth_seq_id_3 224 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 120.95 _pdbx_validate_rmsd_angle.angle_target_value 114.20 _pdbx_validate_rmsd_angle.angle_deviation 6.75 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.10 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 45 ? ? -163.10 115.08 2 1 LEU A 129 ? ? 52.30 -141.93 3 1 SER A 208 ? ? -160.33 119.83 4 1 LEU A 293 ? ? 57.18 -133.86 # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'New York Consortium on Membrane Protein Structure' _pdbx_SG_project.initial_of_center NYCOMPS # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 2.500 _diffrn_reflns.pdbx_d_res_low 50.000 _diffrn_reflns.pdbx_number_obs 20107 _diffrn_reflns.pdbx_Rmerge_I_obs 0.113 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 1.12 _diffrn_reflns.av_sigmaI_over_netI 20.12 _diffrn_reflns.pdbx_redundancy 19.50 _diffrn_reflns.pdbx_percent_possible_obs 99.80 _diffrn_reflns.number 392827 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 6.78 50.00 ? ? 0.090 ? 1.606 19.60 96.50 1 5.38 6.78 ? ? 0.090 ? 1.548 19.00 100.00 1 4.70 5.38 ? ? 0.089 ? 1.287 19.90 99.90 1 4.27 4.70 ? ? 0.092 ? 1.197 20.00 100.00 1 3.97 4.27 ? ? 0.090 ? 1.225 20.20 100.00 1 3.73 3.97 ? ? 0.099 ? 0.929 20.20 100.00 1 3.55 3.73 ? ? 0.108 ? 0.890 20.20 100.00 1 3.39 3.55 ? ? 0.126 ? 1.168 20.20 100.00 1 3.26 3.39 ? ? 0.165 ? 1.230 20.00 100.00 1 3.15 3.26 ? ? 0.201 ? 1.293 20.00 100.00 1 3.05 3.15 ? ? 0.250 ? 1.222 19.70 100.00 1 2.96 3.05 ? ? 0.299 ? 1.147 19.60 100.00 1 2.89 2.96 ? ? 0.341 ? 1.079 19.60 100.00 1 2.82 2.89 ? ? 0.415 ? 0.968 19.50 100.00 1 2.75 2.82 ? ? 0.517 ? 0.972 19.30 100.00 1 2.69 2.75 ? ? 0.626 ? 0.940 19.20 100.00 1 2.64 2.69 ? ? 0.790 ? 0.930 19.00 100.00 1 2.59 2.64 ? ? ? ? 0.886 18.90 100.00 1 2.54 2.59 ? ? ? ? 0.852 18.60 100.00 1 2.50 2.54 ? ? ? ? 0.863 17.90 100.00 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 25.7490 -55.2780 18.7150 0.2336 0.4278 0.4245 -0.0417 0.1470 0.1559 11.5141 4.5379 26.9311 -1.4531 -16.8453 5.2811 -0.1941 -0.4787 0.6727 0.2594 -1.1528 -0.5919 -0.5134 1.3145 -0.5890 'X-RAY DIFFRACTION' 2 ? refined 37.8260 -43.3730 -1.7170 -0.0729 0.0400 0.1252 -0.1113 0.1048 -0.1033 1.8923 2.4218 1.9133 -0.0833 -0.0901 -0.0994 -0.1735 -0.1319 0.3054 0.0077 -0.3493 0.5708 -0.0112 0.2626 -0.4049 'X-RAY DIFFRACTION' 3 ? refined 33.6620 -27.8200 -1.0930 -0.1244 0.0719 0.1381 0.0173 -0.0078 -0.1597 1.7153 2.1663 2.2000 0.0744 0.0292 0.2466 -0.1612 -0.1408 0.3020 -0.0646 0.1547 0.6981 0.0682 -0.1182 -0.5013 'X-RAY DIFFRACTION' 4 ? refined 30.9100 -27.8870 19.1850 0.0094 0.2129 -0.0510 0.0152 0.2524 -0.1336 10.7131 19.4128 4.2604 6.4721 0.0787 6.1729 0.0189 -0.5399 0.5210 -1.2507 -0.2528 0.7213 1.4170 0.2114 -0.6727 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 1 A 15 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 A 16 A 181 ? . . . . ? 'X-RAY DIFFRACTION' 3 3 A 182 A 312 ? . . . . ? 'X-RAY DIFFRACTION' 4 4 A 313 A 334 ? . . . . ? # loop_ _pdbx_phasing_MAD_set_site.id _pdbx_phasing_MAD_set_site.atom_type_symbol _pdbx_phasing_MAD_set_site.Cartn_x _pdbx_phasing_MAD_set_site.Cartn_y _pdbx_phasing_MAD_set_site.Cartn_z _pdbx_phasing_MAD_set_site.occupancy _pdbx_phasing_MAD_set_site.b_iso 1 HG -29.507 54.276 -0.519 1.00 0.00 2 HG -8.439 48.608 3.490 0.77 0.00 3 HG 37.275 24.623 31.805 0.60 0.00 4 HG -23.347 46.668 28.572 0.53 0.00 5 HG -9.103 51.550 6.422 0.45 0.00 6 HG -21.723 48.338 25.625 0.37 0.00 # _phasing.method SAD # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -2 ? A SER 1 2 1 Y 1 A ALA 164 ? A ALA 167 3 1 Y 1 A GLY 165 ? A GLY 168 4 1 Y 1 A LEU 166 ? A LEU 169 5 1 Y 1 A ALA 167 ? A ALA 170 6 1 Y 1 A GLY 335 ? A GLY 338 7 1 Y 1 A SER 336 ? A SER 339 8 1 Y 1 A ARG 337 ? A ARG 340 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 AU AU AU N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 GLN N N N N 89 GLN CA C N S 90 GLN C C N N 91 GLN O O N N 92 GLN CB C N N 93 GLN CG C N N 94 GLN CD C N N 95 GLN OE1 O N N 96 GLN NE2 N N N 97 GLN OXT O N N 98 GLN H H N N 99 GLN H2 H N N 100 GLN HA H N N 101 GLN HB2 H N N 102 GLN HB3 H N N 103 GLN HG2 H N N 104 GLN HG3 H N N 105 GLN HE21 H N N 106 GLN HE22 H N N 107 GLN HXT H N N 108 GLU N N N N 109 GLU CA C N S 110 GLU C C N N 111 GLU O O N N 112 GLU CB C N N 113 GLU CG C N N 114 GLU CD C N N 115 GLU OE1 O N N 116 GLU OE2 O N N 117 GLU OXT O N N 118 GLU H H N N 119 GLU H2 H N N 120 GLU HA H N N 121 GLU HB2 H N N 122 GLU HB3 H N N 123 GLU HG2 H N N 124 GLU HG3 H N N 125 GLU HE2 H N N 126 GLU HXT H N N 127 GLY N N N N 128 GLY CA C N N 129 GLY C C N N 130 GLY O O N N 131 GLY OXT O N N 132 GLY H H N N 133 GLY H2 H N N 134 GLY HA2 H N N 135 GLY HA3 H N N 136 GLY HXT H N N 137 HIS N N N N 138 HIS CA C N S 139 HIS C C N N 140 HIS O O N N 141 HIS CB C N N 142 HIS CG C Y N 143 HIS ND1 N Y N 144 HIS CD2 C Y N 145 HIS CE1 C Y N 146 HIS NE2 N Y N 147 HIS OXT O N N 148 HIS H H N N 149 HIS H2 H N N 150 HIS HA H N N 151 HIS HB2 H N N 152 HIS HB3 H N N 153 HIS HD1 H N N 154 HIS HD2 H N N 155 HIS HE1 H N N 156 HIS HE2 H N N 157 HIS HXT H N N 158 HOH O O N N 159 HOH H1 H N N 160 HOH H2 H N N 161 ILE N N N N 162 ILE CA C N S 163 ILE C C N N 164 ILE O O N N 165 ILE CB C N S 166 ILE CG1 C N N 167 ILE CG2 C N N 168 ILE CD1 C N N 169 ILE OXT O N N 170 ILE H H N N 171 ILE H2 H N N 172 ILE HA H N N 173 ILE HB H N N 174 ILE HG12 H N N 175 ILE HG13 H N N 176 ILE HG21 H N N 177 ILE HG22 H N N 178 ILE HG23 H N N 179 ILE HD11 H N N 180 ILE HD12 H N N 181 ILE HD13 H N N 182 ILE HXT H N N 183 LEU N N N N 184 LEU CA C N S 185 LEU C C N N 186 LEU O O N N 187 LEU CB C N N 188 LEU CG C N N 189 LEU CD1 C N N 190 LEU CD2 C N N 191 LEU OXT O N N 192 LEU H H N N 193 LEU H2 H N N 194 LEU HA H N N 195 LEU HB2 H N N 196 LEU HB3 H N N 197 LEU HG H N N 198 LEU HD11 H N N 199 LEU HD12 H N N 200 LEU HD13 H N N 201 LEU HD21 H N N 202 LEU HD22 H N N 203 LEU HD23 H N N 204 LEU HXT H N N 205 LYS N N N N 206 LYS CA C N S 207 LYS C C N N 208 LYS O O N N 209 LYS CB C N N 210 LYS CG C N N 211 LYS CD C N N 212 LYS CE C N N 213 LYS NZ N N N 214 LYS OXT O N N 215 LYS H H N N 216 LYS H2 H N N 217 LYS HA H N N 218 LYS HB2 H N N 219 LYS HB3 H N N 220 LYS HG2 H N N 221 LYS HG3 H N N 222 LYS HD2 H N N 223 LYS HD3 H N N 224 LYS HE2 H N N 225 LYS HE3 H N N 226 LYS HZ1 H N N 227 LYS HZ2 H N N 228 LYS HZ3 H N N 229 LYS HXT H N N 230 MET N N N N 231 MET CA C N S 232 MET C C N N 233 MET O O N N 234 MET CB C N N 235 MET CG C N N 236 MET SD S N N 237 MET CE C N N 238 MET OXT O N N 239 MET H H N N 240 MET H2 H N N 241 MET HA H N N 242 MET HB2 H N N 243 MET HB3 H N N 244 MET HG2 H N N 245 MET HG3 H N N 246 MET HE1 H N N 247 MET HE2 H N N 248 MET HE3 H N N 249 MET HXT H N N 250 PHE N N N N 251 PHE CA C N S 252 PHE C C N N 253 PHE O O N N 254 PHE CB C N N 255 PHE CG C Y N 256 PHE CD1 C Y N 257 PHE CD2 C Y N 258 PHE CE1 C Y N 259 PHE CE2 C Y N 260 PHE CZ C Y N 261 PHE OXT O N N 262 PHE H H N N 263 PHE H2 H N N 264 PHE HA H N N 265 PHE HB2 H N N 266 PHE HB3 H N N 267 PHE HD1 H N N 268 PHE HD2 H N N 269 PHE HE1 H N N 270 PHE HE2 H N N 271 PHE HZ H N N 272 PHE HXT H N N 273 PRO N N N N 274 PRO CA C N S 275 PRO C C N N 276 PRO O O N N 277 PRO CB C N N 278 PRO CG C N N 279 PRO CD C N N 280 PRO OXT O N N 281 PRO H H N N 282 PRO HA H N N 283 PRO HB2 H N N 284 PRO HB3 H N N 285 PRO HG2 H N N 286 PRO HG3 H N N 287 PRO HD2 H N N 288 PRO HD3 H N N 289 PRO HXT H N N 290 SER N N N N 291 SER CA C N S 292 SER C C N N 293 SER O O N N 294 SER CB C N N 295 SER OG O N N 296 SER OXT O N N 297 SER H H N N 298 SER H2 H N N 299 SER HA H N N 300 SER HB2 H N N 301 SER HB3 H N N 302 SER HG H N N 303 SER HXT H N N 304 THR N N N N 305 THR CA C N S 306 THR C C N N 307 THR O O N N 308 THR CB C N R 309 THR OG1 O N N 310 THR CG2 C N N 311 THR OXT O N N 312 THR H H N N 313 THR H2 H N N 314 THR HA H N N 315 THR HB H N N 316 THR HG1 H N N 317 THR HG21 H N N 318 THR HG22 H N N 319 THR HG23 H N N 320 THR HXT H N N 321 TRP N N N N 322 TRP CA C N S 323 TRP C C N N 324 TRP O O N N 325 TRP CB C N N 326 TRP CG C Y N 327 TRP CD1 C Y N 328 TRP CD2 C Y N 329 TRP NE1 N Y N 330 TRP CE2 C Y N 331 TRP CE3 C Y N 332 TRP CZ2 C Y N 333 TRP CZ3 C Y N 334 TRP CH2 C Y N 335 TRP OXT O N N 336 TRP H H N N 337 TRP H2 H N N 338 TRP HA H N N 339 TRP HB2 H N N 340 TRP HB3 H N N 341 TRP HD1 H N N 342 TRP HE1 H N N 343 TRP HE3 H N N 344 TRP HZ2 H N N 345 TRP HZ3 H N N 346 TRP HH2 H N N 347 TRP HXT H N N 348 TYR N N N N 349 TYR CA C N S 350 TYR C C N N 351 TYR O O N N 352 TYR CB C N N 353 TYR CG C Y N 354 TYR CD1 C Y N 355 TYR CD2 C Y N 356 TYR CE1 C Y N 357 TYR CE2 C Y N 358 TYR CZ C Y N 359 TYR OH O N N 360 TYR OXT O N N 361 TYR H H N N 362 TYR H2 H N N 363 TYR HA H N N 364 TYR HB2 H N N 365 TYR HB3 H N N 366 TYR HD1 H N N 367 TYR HD2 H N N 368 TYR HE1 H N N 369 TYR HE2 H N N 370 TYR HH H N N 371 TYR HXT H N N 372 VAL N N N N 373 VAL CA C N S 374 VAL C C N N 375 VAL O O N N 376 VAL CB C N N 377 VAL CG1 C N N 378 VAL CG2 C N N 379 VAL OXT O N N 380 VAL H H N N 381 VAL H2 H N N 382 VAL HA H N N 383 VAL HB H N N 384 VAL HG11 H N N 385 VAL HG12 H N N 386 VAL HG13 H N N 387 VAL HG21 H N N 388 VAL HG22 H N N 389 VAL HG23 H N N 390 VAL HXT H N N 391 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _atom_sites.entry_id 3K3F _atom_sites.fract_transf_matrix[1][1] 0.009080 _atom_sites.fract_transf_matrix[1][2] 0.005242 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010485 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011784 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol AU C N O S # loop_