data_3K4T # _entry.id 3K4T # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3K4T pdb_00003k4t 10.2210/pdb3k4t/pdb RCSB RCSB055546 ? ? WWPDB D_1000055546 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3F6N _pdbx_database_related.details 'The same protein, P64 crystal form' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3K4T _pdbx_database_status.recvd_initial_deposition_date 2009-10-06 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Dumas, C.' 1 'Hoh, F.' 2 # _citation.id primary _citation.title 'Structural insights into the molecular mechanisms of cauliflower mosaic virus transmission by its insect vector.' _citation.journal_abbrev J.Virol. _citation.journal_volume 84 _citation.page_first 4706 _citation.page_last 4713 _citation.year 2010 _citation.journal_id_ASTM JOVIAM _citation.country US _citation.journal_id_ISSN 0022-538X _citation.journal_id_CSD 0825 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20181714 _citation.pdbx_database_id_DOI 10.1128/JVI.02662-09 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hoh, F.' 1 ? primary 'Uzest, M.' 2 ? primary 'Drucker, M.' 3 ? primary 'Plisson-Chastang, C.' 4 ? primary 'Bron, P.' 5 ? primary 'Blanc, S.' 6 ? primary 'Dumas, C.' 7 ? # _cell.entry_id 3K4T _cell.length_a 69.302 _cell.length_b 28.818 _cell.length_c 75.957 _cell.angle_alpha 90.00 _cell.angle_beta 92.08 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3K4T _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Virion-associated protein' 10489.141 4 ? ? 'UNP residues 1-95' ? 2 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 3 water nat water 18.015 29 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Vap, DNA-binding protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MANLNQIQKEVSEILSDQKSMKADIKAILELLGSQNPIKESLETVAAKIVNDLTKLINDCPCNKEILEALGTQPKEQLIE QPKEKGKGLNLGKYS ; _entity_poly.pdbx_seq_one_letter_code_can ;MANLNQIQKEVSEILSDQKSMKADIKAILELLGSQNPIKESLETVAAKIVNDLTKLINDCPCNKEILEALGTQPKEQLIE QPKEKGKGLNLGKYS ; _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 ASN n 1 4 LEU n 1 5 ASN n 1 6 GLN n 1 7 ILE n 1 8 GLN n 1 9 LYS n 1 10 GLU n 1 11 VAL n 1 12 SER n 1 13 GLU n 1 14 ILE n 1 15 LEU n 1 16 SER n 1 17 ASP n 1 18 GLN n 1 19 LYS n 1 20 SER n 1 21 MET n 1 22 LYS n 1 23 ALA n 1 24 ASP n 1 25 ILE n 1 26 LYS n 1 27 ALA n 1 28 ILE n 1 29 LEU n 1 30 GLU n 1 31 LEU n 1 32 LEU n 1 33 GLY n 1 34 SER n 1 35 GLN n 1 36 ASN n 1 37 PRO n 1 38 ILE n 1 39 LYS n 1 40 GLU n 1 41 SER n 1 42 LEU n 1 43 GLU n 1 44 THR n 1 45 VAL n 1 46 ALA n 1 47 ALA n 1 48 LYS n 1 49 ILE n 1 50 VAL n 1 51 ASN n 1 52 ASP n 1 53 LEU n 1 54 THR n 1 55 LYS n 1 56 LEU n 1 57 ILE n 1 58 ASN n 1 59 ASP n 1 60 CYS n 1 61 PRO n 1 62 CYS n 1 63 ASN n 1 64 LYS n 1 65 GLU n 1 66 ILE n 1 67 LEU n 1 68 GLU n 1 69 ALA n 1 70 LEU n 1 71 GLY n 1 72 THR n 1 73 GLN n 1 74 PRO n 1 75 LYS n 1 76 GLU n 1 77 GLN n 1 78 LEU n 1 79 ILE n 1 80 GLU n 1 81 GLN n 1 82 PRO n 1 83 LYS n 1 84 GLU n 1 85 LYS n 1 86 GLY n 1 87 LYS n 1 88 GLY n 1 89 LEU n 1 90 ASN n 1 91 LEU n 1 92 GLY n 1 93 LYS n 1 94 TYR n 1 95 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name CaMV _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ORF III' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain STRASBOURG _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Cauliflower mosaic virus (STRAIN STRASBOURG)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10648 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21-DE3 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET-3A _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code VDBP_CAMVS _struct_ref.pdbx_db_accession P03551 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MANLNQIQKEVSEILSDQKSMKADIKAILELLGSQNPIKESLETVAAKIVNDLTKLINDCPCNKEILEALGTQPKEQLIE QPKEKGKGLNLGKYS ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3K4T A 1 ? 95 ? P03551 1 ? 95 ? 1 95 2 1 3K4T B 1 ? 95 ? P03551 1 ? 95 ? 1 95 3 1 3K4T C 1 ? 95 ? P03551 1 ? 95 ? 1 95 4 1 3K4T D 1 ? 95 ? P03551 1 ? 95 ? 1 95 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3K4T _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 2 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.81 _exptl_crystal.density_percent_sol 31.92 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;25% PEG 1000, 0.1M MES-NAOH BUFFER, 1.2 MOLAR-EXCESS DNA OLIGONUCLEOTIDE (POLY-AT, 14 BP) , pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K ; # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2009-02-20 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979250 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID23-1' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID23-1 _diffrn_source.pdbx_wavelength 0.979250 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3K4T _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 18.980 _reflns.d_resolution_high 2.590 _reflns.number_obs 9317 _reflns.number_all ? _reflns.percent_possible_obs 96.1 _reflns.pdbx_Rmerge_I_obs 0.07400 _reflns.pdbx_Rsym_value 0.08400 _reflns.pdbx_netI_over_sigmaI 14.4000 _reflns.B_iso_Wilson_estimate 60.10 _reflns.pdbx_redundancy 4.300 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.59 _reflns_shell.d_res_low 2.74 _reflns_shell.percent_possible_all 99.2 _reflns_shell.Rmerge_I_obs 0.30200 _reflns_shell.pdbx_Rsym_value 0.34500 _reflns_shell.meanI_over_sigI_obs 3.600 _reflns_shell.pdbx_redundancy 4.40 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3K4T _refine.ls_number_reflns_obs 8660 _refine.ls_number_reflns_all 9317 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 18.98 _refine.ls_d_res_high 2.59 _refine.ls_percent_reflns_obs 96.1 _refine.ls_R_factor_obs 0.223 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.219 _refine.ls_R_factor_R_free 0.289 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 7.100 _refine.ls_number_reflns_R_free 657 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.947 _refine.correlation_coeff_Fo_to_Fc_free 0.911 _refine.B_iso_mean 25.07 _refine.aniso_B[1][1] 0.03000 _refine.aniso_B[2][2] -0.07000 _refine.aniso_B[3][3] 0.03000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] -0.08000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'WEIGHT MATRIX 0.035' _refine.pdbx_starting_model 'PDB ENTRY 3F6N' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model 'TLS REFINEMENT 4 GROUPS' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.391 _refine.overall_SU_ML 0.311 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 33.250 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2153 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 29 _refine_hist.number_atoms_total 2183 _refine_hist.d_res_high 2.59 _refine_hist.d_res_low 18.98 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.010 0.022 ? 2171 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.255 2.015 ? 2927 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.391 5.000 ? 280 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 42.551 30.000 ? 86 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 20.609 15.000 ? 468 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.085 0.200 ? 371 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.021 ? 1500 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.373 1.500 ? 1414 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.722 2.000 ? 2294 'X-RAY DIFFRACTION' ? r_scbond_it 1.274 3.000 ? 757 'X-RAY DIFFRACTION' ? r_scangle_it 2.187 4.500 ? 633 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.59 _refine_ls_shell.d_res_low 2.65 _refine_ls_shell.number_reflns_R_work 618 _refine_ls_shell.R_factor_R_work 0.3070 _refine_ls_shell.percent_reflns_obs 99.11 _refine_ls_shell.R_factor_R_free 0.4400 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 51 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 3K4T _struct.title 'Crystal structure of the virion-associated protein P3 from caulimovirus' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3K4T _struct_keywords.pdbx_keywords 'VIRAL PROTEIN, DNA-BINDING PROTEIN' _struct_keywords.text 'COILED-COIL, VIRAL PROTEIN, TETRAMER, DNA-BINDING PROTEIN, PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 2 ? GLY A 33 ? ALA A 2 GLY A 33 1 ? 32 HELX_P HELX_P2 2 PRO A 37 ? CYS A 60 ? PRO A 37 CYS A 60 1 ? 24 HELX_P HELX_P3 3 CYS A 62 ? GLY A 71 ? CYS A 62 GLY A 71 1 ? 10 HELX_P HELX_P4 4 ASN B 3 ? SER B 34 ? ASN B 3 SER B 34 1 ? 32 HELX_P HELX_P5 5 PRO B 37 ? ASP B 59 ? PRO B 37 ASP B 59 1 ? 23 HELX_P HELX_P6 6 CYS B 62 ? GLY B 71 ? CYS B 62 GLY B 71 1 ? 10 HELX_P HELX_P7 7 ASN C 3 ? GLY C 33 ? ASN C 3 GLY C 33 1 ? 31 HELX_P HELX_P8 8 PRO C 37 ? ASN C 58 ? PRO C 37 ASN C 58 1 ? 22 HELX_P HELX_P9 9 ASP C 59 ? PRO C 61 ? ASP C 59 PRO C 61 5 ? 3 HELX_P HELX_P10 10 CYS C 62 ? LEU C 70 ? CYS C 62 LEU C 70 1 ? 9 HELX_P HELX_P11 11 ASN D 3 ? GLN D 35 ? ASN D 3 GLN D 35 1 ? 33 HELX_P HELX_P12 12 PRO D 37 ? CYS D 60 ? PRO D 37 CYS D 60 1 ? 24 HELX_P HELX_P13 13 CYS D 62 ? GLU D 68 ? CYS D 62 GLU D 68 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 60 SG ? ? ? 1_555 D CYS 62 SG ? ? A CYS 60 D CYS 62 1_555 ? ? ? ? ? ? ? 2.046 ? ? disulf2 disulf ? ? A CYS 62 SG ? ? ? 1_555 C CYS 60 SG ? ? A CYS 62 C CYS 60 1_555 ? ? ? ? ? ? ? 2.038 ? ? disulf3 disulf ? ? B CYS 60 SG ? ? ? 1_555 C CYS 62 SG ? ? B CYS 60 C CYS 62 1_555 ? ? ? ? ? ? ? 2.041 ? ? disulf4 disulf ? ? B CYS 62 SG ? ? ? 1_555 D CYS 60 SG ? ? B CYS 62 D CYS 60 1_555 ? ? ? ? ? ? ? 2.037 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 3K4T _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3K4T _atom_sites.fract_transf_matrix[1][1] 0.014430 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000524 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.034701 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013174 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ALA 2 2 2 ALA ALA A . n A 1 3 ASN 3 3 3 ASN ASN A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 ASN 5 5 5 ASN ASN A . n A 1 6 GLN 6 6 6 GLN GLN A . n A 1 7 ILE 7 7 7 ILE ILE A . n A 1 8 GLN 8 8 8 GLN GLN A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 GLU 13 13 13 GLU GLU A . n A 1 14 ILE 14 14 14 ILE ILE A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 ASP 17 17 17 ASP ASP A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 SER 20 20 20 SER SER A . n A 1 21 MET 21 21 21 MET MET A . n A 1 22 LYS 22 22 22 LYS LYS A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 ASP 24 24 24 ASP ASP A . n A 1 25 ILE 25 25 25 ILE ILE A . n A 1 26 LYS 26 26 26 LYS LYS A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 ILE 28 28 28 ILE ILE A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 GLU 30 30 30 GLU GLU A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 GLN 35 35 35 GLN GLN A . n A 1 36 ASN 36 36 36 ASN ASN A . n A 1 37 PRO 37 37 37 PRO PRO A . n A 1 38 ILE 38 38 38 ILE ILE A . n A 1 39 LYS 39 39 39 LYS LYS A . n A 1 40 GLU 40 40 40 GLU GLU A . n A 1 41 SER 41 41 41 SER SER A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 GLU 43 43 43 GLU GLU A . n A 1 44 THR 44 44 44 THR THR A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 ALA 46 46 46 ALA ALA A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 ILE 49 49 49 ILE ILE A . n A 1 50 VAL 50 50 50 VAL VAL A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 THR 54 54 54 THR THR A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 ILE 57 57 57 ILE ILE A . n A 1 58 ASN 58 58 58 ASN ASN A . n A 1 59 ASP 59 59 59 ASP ASP A . n A 1 60 CYS 60 60 60 CYS CYS A . n A 1 61 PRO 61 61 61 PRO PRO A . n A 1 62 CYS 62 62 62 CYS CYS A . n A 1 63 ASN 63 63 63 ASN ASN A . n A 1 64 LYS 64 64 64 LYS LYS A . n A 1 65 GLU 65 65 65 GLU GLU A . n A 1 66 ILE 66 66 66 ILE ILE A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 GLU 68 68 68 GLU GLU A . n A 1 69 ALA 69 69 69 ALA ALA A . n A 1 70 LEU 70 70 70 LEU LEU A . n A 1 71 GLY 71 71 71 GLY GLY A . n A 1 72 THR 72 72 ? ? ? A . n A 1 73 GLN 73 73 ? ? ? A . n A 1 74 PRO 74 74 ? ? ? A . n A 1 75 LYS 75 75 ? ? ? A . n A 1 76 GLU 76 76 ? ? ? A . n A 1 77 GLN 77 77 ? ? ? A . n A 1 78 LEU 78 78 ? ? ? A . n A 1 79 ILE 79 79 ? ? ? A . n A 1 80 GLU 80 80 ? ? ? A . n A 1 81 GLN 81 81 ? ? ? A . n A 1 82 PRO 82 82 ? ? ? A . n A 1 83 LYS 83 83 ? ? ? A . n A 1 84 GLU 84 84 ? ? ? A . n A 1 85 LYS 85 85 ? ? ? A . n A 1 86 GLY 86 86 ? ? ? A . n A 1 87 LYS 87 87 ? ? ? A . n A 1 88 GLY 88 88 ? ? ? A . n A 1 89 LEU 89 89 ? ? ? A . n A 1 90 ASN 90 90 ? ? ? A . n A 1 91 LEU 91 91 ? ? ? A . n A 1 92 GLY 92 92 ? ? ? A . n A 1 93 LYS 93 93 ? ? ? A . n A 1 94 TYR 94 94 ? ? ? A . n A 1 95 SER 95 95 ? ? ? A . n B 1 1 MET 1 1 ? ? ? B . n B 1 2 ALA 2 2 ? ? ? B . n B 1 3 ASN 3 3 3 ASN ASN B . n B 1 4 LEU 4 4 4 LEU LEU B . n B 1 5 ASN 5 5 5 ASN ASN B . n B 1 6 GLN 6 6 6 GLN GLN B . n B 1 7 ILE 7 7 7 ILE ILE B . n B 1 8 GLN 8 8 8 GLN GLN B . n B 1 9 LYS 9 9 9 LYS LYS B . n B 1 10 GLU 10 10 10 GLU GLU B . n B 1 11 VAL 11 11 11 VAL VAL B . n B 1 12 SER 12 12 12 SER SER B . n B 1 13 GLU 13 13 13 GLU GLU B . n B 1 14 ILE 14 14 14 ILE ILE B . n B 1 15 LEU 15 15 15 LEU LEU B . n B 1 16 SER 16 16 16 SER SER B . n B 1 17 ASP 17 17 17 ASP ASP B . n B 1 18 GLN 18 18 18 GLN GLN B . n B 1 19 LYS 19 19 19 LYS LYS B . n B 1 20 SER 20 20 20 SER SER B . n B 1 21 MET 21 21 21 MET MET B . n B 1 22 LYS 22 22 22 LYS LYS B . n B 1 23 ALA 23 23 23 ALA ALA B . n B 1 24 ASP 24 24 24 ASP ASP B . n B 1 25 ILE 25 25 25 ILE ILE B . n B 1 26 LYS 26 26 26 LYS LYS B . n B 1 27 ALA 27 27 27 ALA ALA B . n B 1 28 ILE 28 28 28 ILE ILE B . n B 1 29 LEU 29 29 29 LEU LEU B . n B 1 30 GLU 30 30 30 GLU GLU B . n B 1 31 LEU 31 31 31 LEU LEU B . n B 1 32 LEU 32 32 32 LEU LEU B . n B 1 33 GLY 33 33 33 GLY GLY B . n B 1 34 SER 34 34 34 SER SER B . n B 1 35 GLN 35 35 35 GLN GLN B . n B 1 36 ASN 36 36 36 ASN ASN B . n B 1 37 PRO 37 37 37 PRO PRO B . n B 1 38 ILE 38 38 38 ILE ILE B . n B 1 39 LYS 39 39 39 LYS LYS B . n B 1 40 GLU 40 40 40 GLU GLU B . n B 1 41 SER 41 41 41 SER SER B . n B 1 42 LEU 42 42 42 LEU LEU B . n B 1 43 GLU 43 43 43 GLU GLU B . n B 1 44 THR 44 44 44 THR THR B . n B 1 45 VAL 45 45 45 VAL VAL B . n B 1 46 ALA 46 46 46 ALA ALA B . n B 1 47 ALA 47 47 47 ALA ALA B . n B 1 48 LYS 48 48 48 LYS LYS B . n B 1 49 ILE 49 49 49 ILE ILE B . n B 1 50 VAL 50 50 50 VAL VAL B . n B 1 51 ASN 51 51 51 ASN ASN B . n B 1 52 ASP 52 52 52 ASP ASP B . n B 1 53 LEU 53 53 53 LEU LEU B . n B 1 54 THR 54 54 54 THR THR B . n B 1 55 LYS 55 55 55 LYS LYS B . n B 1 56 LEU 56 56 56 LEU LEU B . n B 1 57 ILE 57 57 57 ILE ILE B . n B 1 58 ASN 58 58 58 ASN ASN B . n B 1 59 ASP 59 59 59 ASP ASP B . n B 1 60 CYS 60 60 60 CYS CYS B . n B 1 61 PRO 61 61 61 PRO PRO B . n B 1 62 CYS 62 62 62 CYS CYS B . n B 1 63 ASN 63 63 63 ASN ASN B . n B 1 64 LYS 64 64 64 LYS LYS B . n B 1 65 GLU 65 65 65 GLU GLU B . n B 1 66 ILE 66 66 66 ILE ILE B . n B 1 67 LEU 67 67 67 LEU LEU B . n B 1 68 GLU 68 68 68 GLU GLU B . n B 1 69 ALA 69 69 69 ALA ALA B . n B 1 70 LEU 70 70 70 LEU LEU B . n B 1 71 GLY 71 71 71 GLY GLY B . n B 1 72 THR 72 72 72 THR THR B . n B 1 73 GLN 73 73 73 GLN GLN B . n B 1 74 PRO 74 74 ? ? ? B . n B 1 75 LYS 75 75 ? ? ? B . n B 1 76 GLU 76 76 ? ? ? B . n B 1 77 GLN 77 77 ? ? ? B . n B 1 78 LEU 78 78 ? ? ? B . n B 1 79 ILE 79 79 ? ? ? B . n B 1 80 GLU 80 80 ? ? ? B . n B 1 81 GLN 81 81 ? ? ? B . n B 1 82 PRO 82 82 ? ? ? B . n B 1 83 LYS 83 83 ? ? ? B . n B 1 84 GLU 84 84 ? ? ? B . n B 1 85 LYS 85 85 ? ? ? B . n B 1 86 GLY 86 86 ? ? ? B . n B 1 87 LYS 87 87 ? ? ? B . n B 1 88 GLY 88 88 ? ? ? B . n B 1 89 LEU 89 89 ? ? ? B . n B 1 90 ASN 90 90 ? ? ? B . n B 1 91 LEU 91 91 ? ? ? B . n B 1 92 GLY 92 92 ? ? ? B . n B 1 93 LYS 93 93 ? ? ? B . n B 1 94 TYR 94 94 ? ? ? B . n B 1 95 SER 95 95 ? ? ? B . n C 1 1 MET 1 1 ? ? ? C . n C 1 2 ALA 2 2 2 ALA ALA C . n C 1 3 ASN 3 3 3 ASN ASN C . n C 1 4 LEU 4 4 4 LEU LEU C . n C 1 5 ASN 5 5 5 ASN ASN C . n C 1 6 GLN 6 6 6 GLN GLN C . n C 1 7 ILE 7 7 7 ILE ILE C . n C 1 8 GLN 8 8 8 GLN GLN C . n C 1 9 LYS 9 9 9 LYS LYS C . n C 1 10 GLU 10 10 10 GLU GLU C . n C 1 11 VAL 11 11 11 VAL VAL C . n C 1 12 SER 12 12 12 SER SER C . n C 1 13 GLU 13 13 13 GLU GLU C . n C 1 14 ILE 14 14 14 ILE ILE C . n C 1 15 LEU 15 15 15 LEU LEU C . n C 1 16 SER 16 16 16 SER SER C . n C 1 17 ASP 17 17 17 ASP ASP C . n C 1 18 GLN 18 18 18 GLN GLN C . n C 1 19 LYS 19 19 19 LYS LYS C . n C 1 20 SER 20 20 20 SER SER C . n C 1 21 MET 21 21 21 MET MET C . n C 1 22 LYS 22 22 22 LYS LYS C . n C 1 23 ALA 23 23 23 ALA ALA C . n C 1 24 ASP 24 24 24 ASP ASP C . n C 1 25 ILE 25 25 25 ILE ILE C . n C 1 26 LYS 26 26 26 LYS LYS C . n C 1 27 ALA 27 27 27 ALA ALA C . n C 1 28 ILE 28 28 28 ILE ILE C . n C 1 29 LEU 29 29 29 LEU LEU C . n C 1 30 GLU 30 30 30 GLU GLU C . n C 1 31 LEU 31 31 31 LEU LEU C . n C 1 32 LEU 32 32 32 LEU LEU C . n C 1 33 GLY 33 33 33 GLY GLY C . n C 1 34 SER 34 34 34 SER SER C . n C 1 35 GLN 35 35 35 GLN GLN C . n C 1 36 ASN 36 36 36 ASN ASN C . n C 1 37 PRO 37 37 37 PRO PRO C . n C 1 38 ILE 38 38 38 ILE ILE C . n C 1 39 LYS 39 39 39 LYS LYS C . n C 1 40 GLU 40 40 40 GLU GLU C . n C 1 41 SER 41 41 41 SER SER C . n C 1 42 LEU 42 42 42 LEU LEU C . n C 1 43 GLU 43 43 43 GLU GLU C . n C 1 44 THR 44 44 44 THR THR C . n C 1 45 VAL 45 45 45 VAL VAL C . n C 1 46 ALA 46 46 46 ALA ALA C . n C 1 47 ALA 47 47 47 ALA ALA C . n C 1 48 LYS 48 48 48 LYS LYS C . n C 1 49 ILE 49 49 49 ILE ILE C . n C 1 50 VAL 50 50 50 VAL VAL C . n C 1 51 ASN 51 51 51 ASN ASN C . n C 1 52 ASP 52 52 52 ASP ASP C . n C 1 53 LEU 53 53 53 LEU LEU C . n C 1 54 THR 54 54 54 THR THR C . n C 1 55 LYS 55 55 55 LYS LYS C . n C 1 56 LEU 56 56 56 LEU LEU C . n C 1 57 ILE 57 57 57 ILE ILE C . n C 1 58 ASN 58 58 58 ASN ASN C . n C 1 59 ASP 59 59 59 ASP ASP C . n C 1 60 CYS 60 60 60 CYS CYS C . n C 1 61 PRO 61 61 61 PRO PRO C . n C 1 62 CYS 62 62 62 CYS CYS C . n C 1 63 ASN 63 63 63 ASN ASN C . n C 1 64 LYS 64 64 64 LYS LYS C . n C 1 65 GLU 65 65 65 GLU GLU C . n C 1 66 ILE 66 66 66 ILE ILE C . n C 1 67 LEU 67 67 67 LEU LEU C . n C 1 68 GLU 68 68 68 GLU GLU C . n C 1 69 ALA 69 69 69 ALA ALA C . n C 1 70 LEU 70 70 70 LEU LEU C . n C 1 71 GLY 71 71 71 GLY GLY C . n C 1 72 THR 72 72 72 THR THR C . n C 1 73 GLN 73 73 73 GLN GLN C . n C 1 74 PRO 74 74 74 PRO PRO C . n C 1 75 LYS 75 75 ? ? ? C . n C 1 76 GLU 76 76 ? ? ? C . n C 1 77 GLN 77 77 ? ? ? C . n C 1 78 LEU 78 78 ? ? ? C . n C 1 79 ILE 79 79 ? ? ? C . n C 1 80 GLU 80 80 ? ? ? C . n C 1 81 GLN 81 81 ? ? ? C . n C 1 82 PRO 82 82 ? ? ? C . n C 1 83 LYS 83 83 ? ? ? C . n C 1 84 GLU 84 84 ? ? ? C . n C 1 85 LYS 85 85 ? ? ? C . n C 1 86 GLY 86 86 ? ? ? C . n C 1 87 LYS 87 87 ? ? ? C . n C 1 88 GLY 88 88 ? ? ? C . n C 1 89 LEU 89 89 ? ? ? C . n C 1 90 ASN 90 90 ? ? ? C . n C 1 91 LEU 91 91 ? ? ? C . n C 1 92 GLY 92 92 ? ? ? C . n C 1 93 LYS 93 93 ? ? ? C . n C 1 94 TYR 94 94 ? ? ? C . n C 1 95 SER 95 95 ? ? ? C . n D 1 1 MET 1 1 ? ? ? D . n D 1 2 ALA 2 2 ? ? ? D . n D 1 3 ASN 3 3 3 ASN ASN D . n D 1 4 LEU 4 4 4 LEU LEU D . n D 1 5 ASN 5 5 5 ASN ASN D . n D 1 6 GLN 6 6 6 GLN GLN D . n D 1 7 ILE 7 7 7 ILE ILE D . n D 1 8 GLN 8 8 8 GLN GLN D . n D 1 9 LYS 9 9 9 LYS LYS D . n D 1 10 GLU 10 10 10 GLU GLU D . n D 1 11 VAL 11 11 11 VAL VAL D . n D 1 12 SER 12 12 12 SER SER D . n D 1 13 GLU 13 13 13 GLU GLU D . n D 1 14 ILE 14 14 14 ILE ILE D . n D 1 15 LEU 15 15 15 LEU LEU D . n D 1 16 SER 16 16 16 SER SER D . n D 1 17 ASP 17 17 17 ASP ASP D . n D 1 18 GLN 18 18 18 GLN GLN D . n D 1 19 LYS 19 19 19 LYS LYS D . n D 1 20 SER 20 20 20 SER SER D . n D 1 21 MET 21 21 21 MET MET D . n D 1 22 LYS 22 22 22 LYS LYS D . n D 1 23 ALA 23 23 23 ALA ALA D . n D 1 24 ASP 24 24 24 ASP ASP D . n D 1 25 ILE 25 25 25 ILE ILE D . n D 1 26 LYS 26 26 26 LYS LYS D . n D 1 27 ALA 27 27 27 ALA ALA D . n D 1 28 ILE 28 28 28 ILE ILE D . n D 1 29 LEU 29 29 29 LEU LEU D . n D 1 30 GLU 30 30 30 GLU GLU D . n D 1 31 LEU 31 31 31 LEU LEU D . n D 1 32 LEU 32 32 32 LEU LEU D . n D 1 33 GLY 33 33 33 GLY GLY D . n D 1 34 SER 34 34 34 SER SER D . n D 1 35 GLN 35 35 35 GLN GLN D . n D 1 36 ASN 36 36 36 ASN ASN D . n D 1 37 PRO 37 37 37 PRO PRO D . n D 1 38 ILE 38 38 38 ILE ILE D . n D 1 39 LYS 39 39 39 LYS LYS D . n D 1 40 GLU 40 40 40 GLU GLU D . n D 1 41 SER 41 41 41 SER SER D . n D 1 42 LEU 42 42 42 LEU LEU D . n D 1 43 GLU 43 43 43 GLU GLU D . n D 1 44 THR 44 44 44 THR THR D . n D 1 45 VAL 45 45 45 VAL VAL D . n D 1 46 ALA 46 46 46 ALA ALA D . n D 1 47 ALA 47 47 47 ALA ALA D . n D 1 48 LYS 48 48 48 LYS LYS D . n D 1 49 ILE 49 49 49 ILE ILE D . n D 1 50 VAL 50 50 50 VAL VAL D . n D 1 51 ASN 51 51 51 ASN ASN D . n D 1 52 ASP 52 52 52 ASP ASP D . n D 1 53 LEU 53 53 53 LEU LEU D . n D 1 54 THR 54 54 54 THR THR D . n D 1 55 LYS 55 55 55 LYS LYS D . n D 1 56 LEU 56 56 56 LEU LEU D . n D 1 57 ILE 57 57 57 ILE ILE D . n D 1 58 ASN 58 58 58 ASN ASN D . n D 1 59 ASP 59 59 59 ASP ASP D . n D 1 60 CYS 60 60 60 CYS CYS D . n D 1 61 PRO 61 61 61 PRO PRO D . n D 1 62 CYS 62 62 62 CYS CYS D . n D 1 63 ASN 63 63 63 ASN ASN D . n D 1 64 LYS 64 64 64 LYS LYS D . n D 1 65 GLU 65 65 65 GLU GLU D . n D 1 66 ILE 66 66 66 ILE ILE D . n D 1 67 LEU 67 67 67 LEU LEU D . n D 1 68 GLU 68 68 68 GLU GLU D . n D 1 69 ALA 69 69 69 ALA ALA D . n D 1 70 LEU 70 70 70 LEU LEU D . n D 1 71 GLY 71 71 ? ? ? D . n D 1 72 THR 72 72 ? ? ? D . n D 1 73 GLN 73 73 ? ? ? D . n D 1 74 PRO 74 74 ? ? ? D . n D 1 75 LYS 75 75 ? ? ? D . n D 1 76 GLU 76 76 ? ? ? D . n D 1 77 GLN 77 77 ? ? ? D . n D 1 78 LEU 78 78 ? ? ? D . n D 1 79 ILE 79 79 ? ? ? D . n D 1 80 GLU 80 80 ? ? ? D . n D 1 81 GLN 81 81 ? ? ? D . n D 1 82 PRO 82 82 ? ? ? D . n D 1 83 LYS 83 83 ? ? ? D . n D 1 84 GLU 84 84 ? ? ? D . n D 1 85 LYS 85 85 ? ? ? D . n D 1 86 GLY 86 86 ? ? ? D . n D 1 87 LYS 87 87 ? ? ? D . n D 1 88 GLY 88 88 ? ? ? D . n D 1 89 LEU 89 89 ? ? ? D . n D 1 90 ASN 90 90 ? ? ? D . n D 1 91 LEU 91 91 ? ? ? D . n D 1 92 GLY 92 92 ? ? ? D . n D 1 93 LYS 93 93 ? ? ? D . n D 1 94 TYR 94 94 ? ? ? D . n D 1 95 SER 95 95 ? ? ? D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 CL 1 100 100 CL CL A . F 3 HOH 1 101 101 HOH HOH A . F 3 HOH 2 105 105 HOH HOH A . F 3 HOH 3 113 113 HOH HOH A . F 3 HOH 4 117 117 HOH HOH A . F 3 HOH 5 127 127 HOH HOH A . F 3 HOH 6 129 129 HOH HOH A . G 3 HOH 1 102 102 HOH HOH B . G 3 HOH 2 104 104 HOH HOH B . G 3 HOH 3 109 109 HOH HOH B . G 3 HOH 4 111 111 HOH HOH B . G 3 HOH 5 123 123 HOH HOH B . G 3 HOH 6 124 124 HOH HOH B . G 3 HOH 7 128 128 HOH HOH B . H 3 HOH 1 103 103 HOH HOH C . H 3 HOH 2 107 107 HOH HOH C . H 3 HOH 3 110 110 HOH HOH C . H 3 HOH 4 116 116 HOH HOH C . H 3 HOH 5 119 119 HOH HOH C . H 3 HOH 6 122 122 HOH HOH C . H 3 HOH 7 125 125 HOH HOH C . H 3 HOH 8 130 130 HOH HOH C . I 3 HOH 1 106 106 HOH HOH D . I 3 HOH 2 108 108 HOH HOH D . I 3 HOH 3 112 112 HOH HOH D . I 3 HOH 4 114 114 HOH HOH D . I 3 HOH 5 115 115 HOH HOH D . I 3 HOH 6 118 118 HOH HOH D . I 3 HOH 7 120 120 HOH HOH D . I 3 HOH 8 126 126 HOH HOH D . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 12910 ? 1 MORE -141 ? 1 'SSA (A^2)' 15550 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-03-16 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 44.7070 14.8960 33.4180 0.3462 0.0963 0.3788 -0.0759 0.1228 0.0207 8.0085 2.9031 15.4977 3.7416 9.0064 6.6741 0.0963 0.3411 -0.2461 0.1280 0.0537 -0.0297 0.4047 0.0757 -0.1500 'X-RAY DIFFRACTION' 2 ? refined 26.6190 6.7800 10.5510 0.9189 1.1426 0.9101 -0.1008 0.2440 -0.3757 5.9853 0.5922 14.9008 1.8632 9.4293 2.9433 0.0348 1.0522 -0.1775 0.0830 0.2694 0.0273 0.1583 1.5074 -0.3042 'X-RAY DIFFRACTION' 3 ? refined 13.7410 2.5580 -4.2190 0.3387 0.7070 0.4490 -0.1046 0.1086 -0.2382 8.6028 4.1179 12.6448 1.7426 6.2067 2.9202 -0.0196 0.3547 -0.1758 0.0944 0.3656 -0.1087 -0.0347 1.1541 -0.3460 'X-RAY DIFFRACTION' 4 ? refined -1.8970 -3.2740 -21.2210 0.3262 0.6189 0.5163 -0.0138 0.0775 -0.3080 12.6134 10.9730 17.6170 3.9628 10.5499 3.5073 0.0902 0.1911 -0.0709 0.5813 0.5375 -0.7238 -0.1406 1.6196 -0.6277 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 2 ? ? A 32 ? ? ? ? 'X-RAY DIFFRACTION' 2 1 B 3 ? ? B 32 ? ? ? ? 'X-RAY DIFFRACTION' 3 1 C 2 ? ? C 32 ? ? ? ? 'X-RAY DIFFRACTION' 4 1 D 3 ? ? D 32 ? ? ? ? 'X-RAY DIFFRACTION' 5 2 A 33 ? ? A 40 ? ? ? ? 'X-RAY DIFFRACTION' 6 2 B 33 ? ? B 40 ? ? ? ? 'X-RAY DIFFRACTION' 7 2 C 33 ? ? C 40 ? ? ? ? 'X-RAY DIFFRACTION' 8 2 D 33 ? ? D 40 ? ? ? ? 'X-RAY DIFFRACTION' 9 3 A 41 ? ? A 59 ? ? ? ? 'X-RAY DIFFRACTION' 10 3 B 41 ? ? B 59 ? ? ? ? 'X-RAY DIFFRACTION' 11 3 C 41 ? ? C 59 ? ? ? ? 'X-RAY DIFFRACTION' 12 3 D 41 ? ? D 59 ? ? ? ? 'X-RAY DIFFRACTION' 13 4 A 60 ? ? A 71 ? ? ? ? 'X-RAY DIFFRACTION' 14 4 B 60 ? ? B 73 ? ? ? ? 'X-RAY DIFFRACTION' 15 4 C 60 ? ? C 74 ? ? ? ? 'X-RAY DIFFRACTION' 16 4 D 60 ? ? D 70 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 PHASER phasing . ? 2 REFMAC refinement 5.5.0102 ? 3 MOSFLM 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 N B ASN 3 ? ? O B HOH 109 ? ? 2.13 2 1 O B LEU 67 ? ? OG1 B THR 72 ? ? 2.15 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO B 37 ? ? -48.88 150.29 2 1 CYS B 60 ? ? 40.22 70.21 3 1 PRO C 37 ? ? -31.77 126.63 4 1 CYS C 60 ? ? 54.84 70.21 5 1 PRO D 37 ? ? -33.70 137.62 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A THR 72 ? A THR 72 3 1 Y 1 A GLN 73 ? A GLN 73 4 1 Y 1 A PRO 74 ? A PRO 74 5 1 Y 1 A LYS 75 ? A LYS 75 6 1 Y 1 A GLU 76 ? A GLU 76 7 1 Y 1 A GLN 77 ? A GLN 77 8 1 Y 1 A LEU 78 ? A LEU 78 9 1 Y 1 A ILE 79 ? A ILE 79 10 1 Y 1 A GLU 80 ? A GLU 80 11 1 Y 1 A GLN 81 ? A GLN 81 12 1 Y 1 A PRO 82 ? A PRO 82 13 1 Y 1 A LYS 83 ? A LYS 83 14 1 Y 1 A GLU 84 ? A GLU 84 15 1 Y 1 A LYS 85 ? A LYS 85 16 1 Y 1 A GLY 86 ? A GLY 86 17 1 Y 1 A LYS 87 ? A LYS 87 18 1 Y 1 A GLY 88 ? A GLY 88 19 1 Y 1 A LEU 89 ? A LEU 89 20 1 Y 1 A ASN 90 ? A ASN 90 21 1 Y 1 A LEU 91 ? A LEU 91 22 1 Y 1 A GLY 92 ? A GLY 92 23 1 Y 1 A LYS 93 ? A LYS 93 24 1 Y 1 A TYR 94 ? A TYR 94 25 1 Y 1 A SER 95 ? A SER 95 26 1 Y 1 B MET 1 ? B MET 1 27 1 Y 1 B ALA 2 ? B ALA 2 28 1 Y 1 B PRO 74 ? B PRO 74 29 1 Y 1 B LYS 75 ? B LYS 75 30 1 Y 1 B GLU 76 ? B GLU 76 31 1 Y 1 B GLN 77 ? B GLN 77 32 1 Y 1 B LEU 78 ? B LEU 78 33 1 Y 1 B ILE 79 ? B ILE 79 34 1 Y 1 B GLU 80 ? B GLU 80 35 1 Y 1 B GLN 81 ? B GLN 81 36 1 Y 1 B PRO 82 ? B PRO 82 37 1 Y 1 B LYS 83 ? B LYS 83 38 1 Y 1 B GLU 84 ? B GLU 84 39 1 Y 1 B LYS 85 ? B LYS 85 40 1 Y 1 B GLY 86 ? B GLY 86 41 1 Y 1 B LYS 87 ? B LYS 87 42 1 Y 1 B GLY 88 ? B GLY 88 43 1 Y 1 B LEU 89 ? B LEU 89 44 1 Y 1 B ASN 90 ? B ASN 90 45 1 Y 1 B LEU 91 ? B LEU 91 46 1 Y 1 B GLY 92 ? B GLY 92 47 1 Y 1 B LYS 93 ? B LYS 93 48 1 Y 1 B TYR 94 ? B TYR 94 49 1 Y 1 B SER 95 ? B SER 95 50 1 Y 1 C MET 1 ? C MET 1 51 1 Y 1 C LYS 75 ? C LYS 75 52 1 Y 1 C GLU 76 ? C GLU 76 53 1 Y 1 C GLN 77 ? C GLN 77 54 1 Y 1 C LEU 78 ? C LEU 78 55 1 Y 1 C ILE 79 ? C ILE 79 56 1 Y 1 C GLU 80 ? C GLU 80 57 1 Y 1 C GLN 81 ? C GLN 81 58 1 Y 1 C PRO 82 ? C PRO 82 59 1 Y 1 C LYS 83 ? C LYS 83 60 1 Y 1 C GLU 84 ? C GLU 84 61 1 Y 1 C LYS 85 ? C LYS 85 62 1 Y 1 C GLY 86 ? C GLY 86 63 1 Y 1 C LYS 87 ? C LYS 87 64 1 Y 1 C GLY 88 ? C GLY 88 65 1 Y 1 C LEU 89 ? C LEU 89 66 1 Y 1 C ASN 90 ? C ASN 90 67 1 Y 1 C LEU 91 ? C LEU 91 68 1 Y 1 C GLY 92 ? C GLY 92 69 1 Y 1 C LYS 93 ? C LYS 93 70 1 Y 1 C TYR 94 ? C TYR 94 71 1 Y 1 C SER 95 ? C SER 95 72 1 Y 1 D MET 1 ? D MET 1 73 1 Y 1 D ALA 2 ? D ALA 2 74 1 Y 1 D GLY 71 ? D GLY 71 75 1 Y 1 D THR 72 ? D THR 72 76 1 Y 1 D GLN 73 ? D GLN 73 77 1 Y 1 D PRO 74 ? D PRO 74 78 1 Y 1 D LYS 75 ? D LYS 75 79 1 Y 1 D GLU 76 ? D GLU 76 80 1 Y 1 D GLN 77 ? D GLN 77 81 1 Y 1 D LEU 78 ? D LEU 78 82 1 Y 1 D ILE 79 ? D ILE 79 83 1 Y 1 D GLU 80 ? D GLU 80 84 1 Y 1 D GLN 81 ? D GLN 81 85 1 Y 1 D PRO 82 ? D PRO 82 86 1 Y 1 D LYS 83 ? D LYS 83 87 1 Y 1 D GLU 84 ? D GLU 84 88 1 Y 1 D LYS 85 ? D LYS 85 89 1 Y 1 D GLY 86 ? D GLY 86 90 1 Y 1 D LYS 87 ? D LYS 87 91 1 Y 1 D GLY 88 ? D GLY 88 92 1 Y 1 D LEU 89 ? D LEU 89 93 1 Y 1 D ASN 90 ? D ASN 90 94 1 Y 1 D LEU 91 ? D LEU 91 95 1 Y 1 D GLY 92 ? D GLY 92 96 1 Y 1 D LYS 93 ? D LYS 93 97 1 Y 1 D TYR 94 ? D TYR 94 98 1 Y 1 D SER 95 ? D SER 95 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ASN N N N N 14 ASN CA C N S 15 ASN C C N N 16 ASN O O N N 17 ASN CB C N N 18 ASN CG C N N 19 ASN OD1 O N N 20 ASN ND2 N N N 21 ASN OXT O N N 22 ASN H H N N 23 ASN H2 H N N 24 ASN HA H N N 25 ASN HB2 H N N 26 ASN HB3 H N N 27 ASN HD21 H N N 28 ASN HD22 H N N 29 ASN HXT H N N 30 ASP N N N N 31 ASP CA C N S 32 ASP C C N N 33 ASP O O N N 34 ASP CB C N N 35 ASP CG C N N 36 ASP OD1 O N N 37 ASP OD2 O N N 38 ASP OXT O N N 39 ASP H H N N 40 ASP H2 H N N 41 ASP HA H N N 42 ASP HB2 H N N 43 ASP HB3 H N N 44 ASP HD2 H N N 45 ASP HXT H N N 46 CL CL CL N N 47 CYS N N N N 48 CYS CA C N R 49 CYS C C N N 50 CYS O O N N 51 CYS CB C N N 52 CYS SG S N N 53 CYS OXT O N N 54 CYS H H N N 55 CYS H2 H N N 56 CYS HA H N N 57 CYS HB2 H N N 58 CYS HB3 H N N 59 CYS HG H N N 60 CYS HXT H N N 61 GLN N N N N 62 GLN CA C N S 63 GLN C C N N 64 GLN O O N N 65 GLN CB C N N 66 GLN CG C N N 67 GLN CD C N N 68 GLN OE1 O N N 69 GLN NE2 N N N 70 GLN OXT O N N 71 GLN H H N N 72 GLN H2 H N N 73 GLN HA H N N 74 GLN HB2 H N N 75 GLN HB3 H N N 76 GLN HG2 H N N 77 GLN HG3 H N N 78 GLN HE21 H N N 79 GLN HE22 H N N 80 GLN HXT H N N 81 GLU N N N N 82 GLU CA C N S 83 GLU C C N N 84 GLU O O N N 85 GLU CB C N N 86 GLU CG C N N 87 GLU CD C N N 88 GLU OE1 O N N 89 GLU OE2 O N N 90 GLU OXT O N N 91 GLU H H N N 92 GLU H2 H N N 93 GLU HA H N N 94 GLU HB2 H N N 95 GLU HB3 H N N 96 GLU HG2 H N N 97 GLU HG3 H N N 98 GLU HE2 H N N 99 GLU HXT H N N 100 GLY N N N N 101 GLY CA C N N 102 GLY C C N N 103 GLY O O N N 104 GLY OXT O N N 105 GLY H H N N 106 GLY H2 H N N 107 GLY HA2 H N N 108 GLY HA3 H N N 109 GLY HXT H N N 110 HOH O O N N 111 HOH H1 H N N 112 HOH H2 H N N 113 ILE N N N N 114 ILE CA C N S 115 ILE C C N N 116 ILE O O N N 117 ILE CB C N S 118 ILE CG1 C N N 119 ILE CG2 C N N 120 ILE CD1 C N N 121 ILE OXT O N N 122 ILE H H N N 123 ILE H2 H N N 124 ILE HA H N N 125 ILE HB H N N 126 ILE HG12 H N N 127 ILE HG13 H N N 128 ILE HG21 H N N 129 ILE HG22 H N N 130 ILE HG23 H N N 131 ILE HD11 H N N 132 ILE HD12 H N N 133 ILE HD13 H N N 134 ILE HXT H N N 135 LEU N N N N 136 LEU CA C N S 137 LEU C C N N 138 LEU O O N N 139 LEU CB C N N 140 LEU CG C N N 141 LEU CD1 C N N 142 LEU CD2 C N N 143 LEU OXT O N N 144 LEU H H N N 145 LEU H2 H N N 146 LEU HA H N N 147 LEU HB2 H N N 148 LEU HB3 H N N 149 LEU HG H N N 150 LEU HD11 H N N 151 LEU HD12 H N N 152 LEU HD13 H N N 153 LEU HD21 H N N 154 LEU HD22 H N N 155 LEU HD23 H N N 156 LEU HXT H N N 157 LYS N N N N 158 LYS CA C N S 159 LYS C C N N 160 LYS O O N N 161 LYS CB C N N 162 LYS CG C N N 163 LYS CD C N N 164 LYS CE C N N 165 LYS NZ N N N 166 LYS OXT O N N 167 LYS H H N N 168 LYS H2 H N N 169 LYS HA H N N 170 LYS HB2 H N N 171 LYS HB3 H N N 172 LYS HG2 H N N 173 LYS HG3 H N N 174 LYS HD2 H N N 175 LYS HD3 H N N 176 LYS HE2 H N N 177 LYS HE3 H N N 178 LYS HZ1 H N N 179 LYS HZ2 H N N 180 LYS HZ3 H N N 181 LYS HXT H N N 182 MET N N N N 183 MET CA C N S 184 MET C C N N 185 MET O O N N 186 MET CB C N N 187 MET CG C N N 188 MET SD S N N 189 MET CE C N N 190 MET OXT O N N 191 MET H H N N 192 MET H2 H N N 193 MET HA H N N 194 MET HB2 H N N 195 MET HB3 H N N 196 MET HG2 H N N 197 MET HG3 H N N 198 MET HE1 H N N 199 MET HE2 H N N 200 MET HE3 H N N 201 MET HXT H N N 202 PRO N N N N 203 PRO CA C N S 204 PRO C C N N 205 PRO O O N N 206 PRO CB C N N 207 PRO CG C N N 208 PRO CD C N N 209 PRO OXT O N N 210 PRO H H N N 211 PRO HA H N N 212 PRO HB2 H N N 213 PRO HB3 H N N 214 PRO HG2 H N N 215 PRO HG3 H N N 216 PRO HD2 H N N 217 PRO HD3 H N N 218 PRO HXT H N N 219 SER N N N N 220 SER CA C N S 221 SER C C N N 222 SER O O N N 223 SER CB C N N 224 SER OG O N N 225 SER OXT O N N 226 SER H H N N 227 SER H2 H N N 228 SER HA H N N 229 SER HB2 H N N 230 SER HB3 H N N 231 SER HG H N N 232 SER HXT H N N 233 THR N N N N 234 THR CA C N S 235 THR C C N N 236 THR O O N N 237 THR CB C N R 238 THR OG1 O N N 239 THR CG2 C N N 240 THR OXT O N N 241 THR H H N N 242 THR H2 H N N 243 THR HA H N N 244 THR HB H N N 245 THR HG1 H N N 246 THR HG21 H N N 247 THR HG22 H N N 248 THR HG23 H N N 249 THR HXT H N N 250 TYR N N N N 251 TYR CA C N S 252 TYR C C N N 253 TYR O O N N 254 TYR CB C N N 255 TYR CG C Y N 256 TYR CD1 C Y N 257 TYR CD2 C Y N 258 TYR CE1 C Y N 259 TYR CE2 C Y N 260 TYR CZ C Y N 261 TYR OH O N N 262 TYR OXT O N N 263 TYR H H N N 264 TYR H2 H N N 265 TYR HA H N N 266 TYR HB2 H N N 267 TYR HB3 H N N 268 TYR HD1 H N N 269 TYR HD2 H N N 270 TYR HE1 H N N 271 TYR HE2 H N N 272 TYR HH H N N 273 TYR HXT H N N 274 VAL N N N N 275 VAL CA C N S 276 VAL C C N N 277 VAL O O N N 278 VAL CB C N N 279 VAL CG1 C N N 280 VAL CG2 C N N 281 VAL OXT O N N 282 VAL H H N N 283 VAL H2 H N N 284 VAL HA H N N 285 VAL HB H N N 286 VAL HG11 H N N 287 VAL HG12 H N N 288 VAL HG13 H N N 289 VAL HG21 H N N 290 VAL HG22 H N N 291 VAL HG23 H N N 292 VAL HXT H N N 293 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ASN N CA sing N N 13 ASN N H sing N N 14 ASN N H2 sing N N 15 ASN CA C sing N N 16 ASN CA CB sing N N 17 ASN CA HA sing N N 18 ASN C O doub N N 19 ASN C OXT sing N N 20 ASN CB CG sing N N 21 ASN CB HB2 sing N N 22 ASN CB HB3 sing N N 23 ASN CG OD1 doub N N 24 ASN CG ND2 sing N N 25 ASN ND2 HD21 sing N N 26 ASN ND2 HD22 sing N N 27 ASN OXT HXT sing N N 28 ASP N CA sing N N 29 ASP N H sing N N 30 ASP N H2 sing N N 31 ASP CA C sing N N 32 ASP CA CB sing N N 33 ASP CA HA sing N N 34 ASP C O doub N N 35 ASP C OXT sing N N 36 ASP CB CG sing N N 37 ASP CB HB2 sing N N 38 ASP CB HB3 sing N N 39 ASP CG OD1 doub N N 40 ASP CG OD2 sing N N 41 ASP OD2 HD2 sing N N 42 ASP OXT HXT sing N N 43 CYS N CA sing N N 44 CYS N H sing N N 45 CYS N H2 sing N N 46 CYS CA C sing N N 47 CYS CA CB sing N N 48 CYS CA HA sing N N 49 CYS C O doub N N 50 CYS C OXT sing N N 51 CYS CB SG sing N N 52 CYS CB HB2 sing N N 53 CYS CB HB3 sing N N 54 CYS SG HG sing N N 55 CYS OXT HXT sing N N 56 GLN N CA sing N N 57 GLN N H sing N N 58 GLN N H2 sing N N 59 GLN CA C sing N N 60 GLN CA CB sing N N 61 GLN CA HA sing N N 62 GLN C O doub N N 63 GLN C OXT sing N N 64 GLN CB CG sing N N 65 GLN CB HB2 sing N N 66 GLN CB HB3 sing N N 67 GLN CG CD sing N N 68 GLN CG HG2 sing N N 69 GLN CG HG3 sing N N 70 GLN CD OE1 doub N N 71 GLN CD NE2 sing N N 72 GLN NE2 HE21 sing N N 73 GLN NE2 HE22 sing N N 74 GLN OXT HXT sing N N 75 GLU N CA sing N N 76 GLU N H sing N N 77 GLU N H2 sing N N 78 GLU CA C sing N N 79 GLU CA CB sing N N 80 GLU CA HA sing N N 81 GLU C O doub N N 82 GLU C OXT sing N N 83 GLU CB CG sing N N 84 GLU CB HB2 sing N N 85 GLU CB HB3 sing N N 86 GLU CG CD sing N N 87 GLU CG HG2 sing N N 88 GLU CG HG3 sing N N 89 GLU CD OE1 doub N N 90 GLU CD OE2 sing N N 91 GLU OE2 HE2 sing N N 92 GLU OXT HXT sing N N 93 GLY N CA sing N N 94 GLY N H sing N N 95 GLY N H2 sing N N 96 GLY CA C sing N N 97 GLY CA HA2 sing N N 98 GLY CA HA3 sing N N 99 GLY C O doub N N 100 GLY C OXT sing N N 101 GLY OXT HXT sing N N 102 HOH O H1 sing N N 103 HOH O H2 sing N N 104 ILE N CA sing N N 105 ILE N H sing N N 106 ILE N H2 sing N N 107 ILE CA C sing N N 108 ILE CA CB sing N N 109 ILE CA HA sing N N 110 ILE C O doub N N 111 ILE C OXT sing N N 112 ILE CB CG1 sing N N 113 ILE CB CG2 sing N N 114 ILE CB HB sing N N 115 ILE CG1 CD1 sing N N 116 ILE CG1 HG12 sing N N 117 ILE CG1 HG13 sing N N 118 ILE CG2 HG21 sing N N 119 ILE CG2 HG22 sing N N 120 ILE CG2 HG23 sing N N 121 ILE CD1 HD11 sing N N 122 ILE CD1 HD12 sing N N 123 ILE CD1 HD13 sing N N 124 ILE OXT HXT sing N N 125 LEU N CA sing N N 126 LEU N H sing N N 127 LEU N H2 sing N N 128 LEU CA C sing N N 129 LEU CA CB sing N N 130 LEU CA HA sing N N 131 LEU C O doub N N 132 LEU C OXT sing N N 133 LEU CB CG sing N N 134 LEU CB HB2 sing N N 135 LEU CB HB3 sing N N 136 LEU CG CD1 sing N N 137 LEU CG CD2 sing N N 138 LEU CG HG sing N N 139 LEU CD1 HD11 sing N N 140 LEU CD1 HD12 sing N N 141 LEU CD1 HD13 sing N N 142 LEU CD2 HD21 sing N N 143 LEU CD2 HD22 sing N N 144 LEU CD2 HD23 sing N N 145 LEU OXT HXT sing N N 146 LYS N CA sing N N 147 LYS N H sing N N 148 LYS N H2 sing N N 149 LYS CA C sing N N 150 LYS CA CB sing N N 151 LYS CA HA sing N N 152 LYS C O doub N N 153 LYS C OXT sing N N 154 LYS CB CG sing N N 155 LYS CB HB2 sing N N 156 LYS CB HB3 sing N N 157 LYS CG CD sing N N 158 LYS CG HG2 sing N N 159 LYS CG HG3 sing N N 160 LYS CD CE sing N N 161 LYS CD HD2 sing N N 162 LYS CD HD3 sing N N 163 LYS CE NZ sing N N 164 LYS CE HE2 sing N N 165 LYS CE HE3 sing N N 166 LYS NZ HZ1 sing N N 167 LYS NZ HZ2 sing N N 168 LYS NZ HZ3 sing N N 169 LYS OXT HXT sing N N 170 MET N CA sing N N 171 MET N H sing N N 172 MET N H2 sing N N 173 MET CA C sing N N 174 MET CA CB sing N N 175 MET CA HA sing N N 176 MET C O doub N N 177 MET C OXT sing N N 178 MET CB CG sing N N 179 MET CB HB2 sing N N 180 MET CB HB3 sing N N 181 MET CG SD sing N N 182 MET CG HG2 sing N N 183 MET CG HG3 sing N N 184 MET SD CE sing N N 185 MET CE HE1 sing N N 186 MET CE HE2 sing N N 187 MET CE HE3 sing N N 188 MET OXT HXT sing N N 189 PRO N CA sing N N 190 PRO N CD sing N N 191 PRO N H sing N N 192 PRO CA C sing N N 193 PRO CA CB sing N N 194 PRO CA HA sing N N 195 PRO C O doub N N 196 PRO C OXT sing N N 197 PRO CB CG sing N N 198 PRO CB HB2 sing N N 199 PRO CB HB3 sing N N 200 PRO CG CD sing N N 201 PRO CG HG2 sing N N 202 PRO CG HG3 sing N N 203 PRO CD HD2 sing N N 204 PRO CD HD3 sing N N 205 PRO OXT HXT sing N N 206 SER N CA sing N N 207 SER N H sing N N 208 SER N H2 sing N N 209 SER CA C sing N N 210 SER CA CB sing N N 211 SER CA HA sing N N 212 SER C O doub N N 213 SER C OXT sing N N 214 SER CB OG sing N N 215 SER CB HB2 sing N N 216 SER CB HB3 sing N N 217 SER OG HG sing N N 218 SER OXT HXT sing N N 219 THR N CA sing N N 220 THR N H sing N N 221 THR N H2 sing N N 222 THR CA C sing N N 223 THR CA CB sing N N 224 THR CA HA sing N N 225 THR C O doub N N 226 THR C OXT sing N N 227 THR CB OG1 sing N N 228 THR CB CG2 sing N N 229 THR CB HB sing N N 230 THR OG1 HG1 sing N N 231 THR CG2 HG21 sing N N 232 THR CG2 HG22 sing N N 233 THR CG2 HG23 sing N N 234 THR OXT HXT sing N N 235 TYR N CA sing N N 236 TYR N H sing N N 237 TYR N H2 sing N N 238 TYR CA C sing N N 239 TYR CA CB sing N N 240 TYR CA HA sing N N 241 TYR C O doub N N 242 TYR C OXT sing N N 243 TYR CB CG sing N N 244 TYR CB HB2 sing N N 245 TYR CB HB3 sing N N 246 TYR CG CD1 doub Y N 247 TYR CG CD2 sing Y N 248 TYR CD1 CE1 sing Y N 249 TYR CD1 HD1 sing N N 250 TYR CD2 CE2 doub Y N 251 TYR CD2 HD2 sing N N 252 TYR CE1 CZ doub Y N 253 TYR CE1 HE1 sing N N 254 TYR CE2 CZ sing Y N 255 TYR CE2 HE2 sing N N 256 TYR CZ OH sing N N 257 TYR OH HH sing N N 258 TYR OXT HXT sing N N 259 VAL N CA sing N N 260 VAL N H sing N N 261 VAL N H2 sing N N 262 VAL CA C sing N N 263 VAL CA CB sing N N 264 VAL CA HA sing N N 265 VAL C O doub N N 266 VAL C OXT sing N N 267 VAL CB CG1 sing N N 268 VAL CB CG2 sing N N 269 VAL CB HB sing N N 270 VAL CG1 HG11 sing N N 271 VAL CG1 HG12 sing N N 272 VAL CG1 HG13 sing N N 273 VAL CG2 HG21 sing N N 274 VAL CG2 HG22 sing N N 275 VAL CG2 HG23 sing N N 276 VAL OXT HXT sing N N 277 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3F6N _pdbx_initial_refinement_model.details 'PDB ENTRY 3F6N' #