HEADER TRANSFERASE 13-OCT-09 3K7Y TITLE ASPARTATE AMINOTRANSFERASE OF PLASMODIUM FALCIPARUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: ASPARTATE AMINOTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.6.1.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM; SOURCE 3 ORGANISM_TAXID: 36329; SOURCE 4 GENE: PFB0200C; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ASPARTATE AMINOTRANSFERASE PLASMODIUM FALCIPARUM, AMINOTRANSFERASE, KEYWDS 2 PYRIDOXAL PHOSPHATE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.R.GROVES,R.JORDANOVA,R.JAIN,C.WRENGER,I.B.MULLER REVDAT 4 06-SEP-23 3K7Y 1 REMARK REVDAT 3 26-JAN-11 3K7Y 1 JRNL REVDAT 2 17-NOV-10 3K7Y 1 JRNL REVDAT 1 13-OCT-10 3K7Y 0 JRNL AUTH C.WRENGER,I.B.MULLER,A.J.SCHIFFERDECKER,R.JAIN,R.JORDANOVA, JRNL AUTH 2 M.R.GROVES JRNL TITL SPECIFIC INHIBITION OF THE ASPARTATE AMINOTRANSFERASE OF JRNL TITL 2 PLASMODIUM FALCIPARUM. JRNL REF J.MOL.BIOL. V. 405 956 2011 JRNL REFN ISSN 0022-2836 JRNL PMID 21087616 JRNL DOI 10.1016/J.JMB.2010.11.018 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 82.08 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 11040 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.218 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.292 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 562 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.88 REMARK 3 REFLECTION IN BIN (WORKING SET) : 681 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 84.62 REMARK 3 BIN R VALUE (WORKING SET) : 0.3640 REMARK 3 BIN FREE R VALUE SET COUNT : 40 REMARK 3 BIN FREE R VALUE : 0.4520 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3311 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 9 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 77.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.60000 REMARK 3 B22 (A**2) : 1.60000 REMARK 3 B33 (A**2) : -2.41000 REMARK 3 B12 (A**2) : 0.80000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.462 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.434 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 49.095 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.894 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3392 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4583 ; 1.434 ; 1.960 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 404 ; 6.252 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 170 ;39.454 ;25.529 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 631 ;21.923 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;16.989 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 517 ; 0.106 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2529 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2018 ; 0.602 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3284 ; 1.122 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1374 ; 1.109 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1299 ; 1.917 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 65 REMARK 3 ORIGIN FOR THE GROUP (A): 25.7280 40.8010 32.9860 REMARK 3 T TENSOR REMARK 3 T11: 0.2918 T22: 0.1596 REMARK 3 T33: 0.1247 T12: -0.0075 REMARK 3 T13: 0.1053 T23: 0.0169 REMARK 3 L TENSOR REMARK 3 L11: 1.2802 L22: 0.7521 REMARK 3 L33: 2.3491 L12: 0.6378 REMARK 3 L13: -0.2984 L23: -0.1389 REMARK 3 S TENSOR REMARK 3 S11: 0.1826 S12: -0.0156 S13: 0.3259 REMARK 3 S21: -0.0287 S22: 0.0362 S23: 0.1081 REMARK 3 S31: -0.5365 S32: 0.3328 S33: -0.2187 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 66 A 236 REMARK 3 ORIGIN FOR THE GROUP (A): 16.6470 20.9810 19.6310 REMARK 3 T TENSOR REMARK 3 T11: 0.1197 T22: 0.2609 REMARK 3 T33: 0.1742 T12: 0.0113 REMARK 3 T13: -0.0579 T23: 0.0848 REMARK 3 L TENSOR REMARK 3 L11: 0.8650 L22: 0.8915 REMARK 3 L33: 3.0446 L12: 0.2923 REMARK 3 L13: -0.3496 L23: 0.4836 REMARK 3 S TENSOR REMARK 3 S11: 0.0390 S12: 0.3329 S13: 0.0344 REMARK 3 S21: -0.1240 S22: 0.0501 S23: 0.1772 REMARK 3 S31: 0.1948 S32: -0.1764 S33: -0.0891 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 237 A 291 REMARK 3 ORIGIN FOR THE GROUP (A): 9.8390 22.1190 31.2450 REMARK 3 T TENSOR REMARK 3 T11: 0.0504 T22: 0.2630 REMARK 3 T33: 0.2340 T12: -0.0145 REMARK 3 T13: 0.0190 T23: 0.0538 REMARK 3 L TENSOR REMARK 3 L11: 1.0359 L22: 3.4149 REMARK 3 L33: 3.2451 L12: 0.0641 REMARK 3 L13: 0.5018 L23: 0.2005 REMARK 3 S TENSOR REMARK 3 S11: 0.1768 S12: 0.0628 S13: 0.2025 REMARK 3 S21: 0.1037 S22: -0.0881 S23: 0.4161 REMARK 3 S31: 0.2806 S32: -0.5236 S33: -0.0887 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 292 A 374 REMARK 3 ORIGIN FOR THE GROUP (A): 25.3710 41.3870 14.9000 REMARK 3 T TENSOR REMARK 3 T11: 0.2480 T22: 0.2373 REMARK 3 T33: 0.1704 T12: 0.0428 REMARK 3 T13: 0.0226 T23: 0.1150 REMARK 3 L TENSOR REMARK 3 L11: 3.1549 L22: 1.0417 REMARK 3 L33: 2.2247 L12: 1.0833 REMARK 3 L13: -1.5116 L23: -0.6253 REMARK 3 S TENSOR REMARK 3 S11: 0.0286 S12: 0.3532 S13: 0.2897 REMARK 3 S21: -0.0494 S22: 0.1779 S23: 0.0804 REMARK 3 S31: -0.5474 S32: -0.1070 S33: -0.2065 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 375 A 405 REMARK 3 ORIGIN FOR THE GROUP (A): 36.7040 44.4220 14.8800 REMARK 3 T TENSOR REMARK 3 T11: 0.3444 T22: 0.2179 REMARK 3 T33: 0.1160 T12: -0.1112 REMARK 3 T13: 0.0540 T23: 0.0250 REMARK 3 L TENSOR REMARK 3 L11: 3.6257 L22: 2.9124 REMARK 3 L33: 5.1894 L12: 0.8626 REMARK 3 L13: -1.9552 L23: -1.9252 REMARK 3 S TENSOR REMARK 3 S11: 0.2495 S12: -0.1255 S13: 0.1053 REMARK 3 S21: -0.0727 S22: 0.1478 S23: 0.0555 REMARK 3 S31: -0.8699 S32: 0.1495 S33: -0.3973 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3K7Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-OCT-09. REMARK 100 THE DEPOSITION ID IS D_1000055659. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-APR-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8726 REMARK 200 MONOCHROMATOR : SI (111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11597 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 82.080 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : 0.09700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 0.48700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: 1Q7W REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0 M AMMONIUM SULFATE, 0.1 M BIS REMARK 280 -TRIS/HCL, PH 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 50.41900 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 29.10942 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 80.12233 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 50.41900 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 29.10942 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 80.12233 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 50.41900 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 29.10942 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 80.12233 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 50.41900 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 29.10942 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 80.12233 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 50.41900 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 29.10942 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 80.12233 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 50.41900 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 29.10942 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 80.12233 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 58.21885 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 160.24467 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 58.21885 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 160.24467 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 58.21885 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 160.24467 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 58.21885 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 160.24467 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 58.21885 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 160.24467 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 58.21885 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 160.24467 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -41.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 50.41900 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 29.10942 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 80.12233 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 90 OE2 GLU A 235 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 4 -37.86 -37.23 REMARK 500 LEU A 5 6.96 -66.00 REMARK 500 LYS A 24 39.39 -98.40 REMARK 500 THR A 74 -169.09 -101.23 REMARK 500 LEU A 120 -155.19 -110.37 REMARK 500 SER A 141 4.69 -59.66 REMARK 500 PHE A 151 -89.39 -153.91 REMARK 500 PRO A 172 -128.59 6.49 REMARK 500 HIS A 208 155.89 -45.75 REMARK 500 LYS A 237 74.62 47.97 REMARK 500 PHE A 241 -168.97 -169.06 REMARK 500 TYR A 254 -70.31 -73.14 REMARK 500 GLN A 268 -8.05 -56.08 REMARK 500 PHE A 285 -79.52 -130.92 REMARK 500 SER A 287 -47.94 59.45 REMARK 500 THR A 334 -73.92 -74.03 REMARK 500 GLN A 351 155.72 -48.23 REMARK 500 HIS A 372 50.13 -97.08 REMARK 500 SER A 384 -7.14 -58.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLP A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 407 DBREF 3K7Y A 1 405 UNP O96142 O96142_PLAF7 1 405 SEQRES 1 A 405 MET ASP LYS LEU LEU SER SER LEU GLU ASN ILE GLU VAL SEQRES 2 A 405 ASP ASN ILE LEU LYS THR ALA ARG GLU PHE LYS GLU ASP SEQRES 3 A 405 THR CYS GLU GLU LYS ILE ASN LEU SER ILE GLY VAL CYS SEQRES 4 A 405 CYS ASN ASP ASP GLY ASP LEU HIS ILE PHE ASP SER VAL SEQRES 5 A 405 LEU ASN ALA ASP LYS LEU VAL THR GLU ASN TYR LYS GLU SEQRES 6 A 405 LYS PRO TYR LEU LEU GLY ASN GLY THR GLU ASP PHE SER SEQRES 7 A 405 THR LEU THR GLN ASN LEU ILE PHE GLY ASN ASN SER LYS SEQRES 8 A 405 TYR ILE GLU ASP LYS LYS ILE CYS THR ILE GLN CYS ILE SEQRES 9 A 405 GLY GLY THR GLY ALA ILE PHE VAL LEU LEU GLU PHE LEU SEQRES 10 A 405 LYS MET LEU ASN VAL GLU THR LEU TYR VAL THR ASN PRO SEQRES 11 A 405 PRO TYR ILE ASN HIS VAL ASN MET ILE GLU SER ARG GLY SEQRES 12 A 405 PHE ASN LEU LYS TYR ILE ASN PHE PHE ASP TYR ASN LEU SEQRES 13 A 405 ILE ASP ILE ASN TYR ASP LEU PHE LEU ASN ASP LEU ARG SEQRES 14 A 405 ASN ILE PRO ASN GLY SER SER VAL ILE LEU GLN ILE SER SEQRES 15 A 405 CYS TYR ASN PRO CYS SER VAL ASN ILE GLU GLU LYS TYR SEQRES 16 A 405 PHE ASP GLU ILE ILE GLU ILE VAL LEU HIS LYS LYS HIS SEQRES 17 A 405 VAL ILE ILE PHE ASP ILE ALA TYR GLN GLY PHE GLY HIS SEQRES 18 A 405 THR ASN LEU GLU GLU ASP VAL LEU LEU ILE ARG LYS PHE SEQRES 19 A 405 GLU GLU LYS ASN ILE ALA PHE SER VAL CYS GLN SER PHE SEQRES 20 A 405 SER LYS ASN MET SER LEU TYR GLY GLU ARG ALA GLY ALA SEQRES 21 A 405 LEU HIS ILE VAL CYS LYS ASN GLN GLU GLU LYS LYS ILE SEQRES 22 A 405 VAL PHE ASN ASN LEU CYS PHE ILE VAL ARG LYS PHE TYR SEQRES 23 A 405 SER SER PRO VAL ILE HIS THR ASN ARG ILE LEU CYS GLN SEQRES 24 A 405 LEU LEU ASN ASN GLN ASN LEU LYS LEU ASN TRP ILE LYS SEQRES 25 A 405 GLU LEU SER GLN LEU SER GLN ARG ILE THR ASN ASN ARG SEQRES 26 A 405 ILE LEU PHE PHE ASN LYS LEU GLU THR TYR GLN LYS LYS SEQRES 27 A 405 TYR ASN LEU ASN TYR ASP TRP ASN VAL TYR LYS LYS GLN SEQRES 28 A 405 ARG GLY LEU PHE SER PHE VAL PRO LEU LEU ALA LYS ILE SEQRES 29 A 405 ALA GLU HIS LEU LYS THR HIS HIS ILE TYR ILE ILE ASN SEQRES 30 A 405 ASN GLY ARG ILE ASN VAL SER GLY ILE THR LYS ASN ASN SEQRES 31 A 405 VAL ASP TYR ILE ALA ASP LYS ILE CYS LEU SER LEU SER SEQRES 32 A 405 GLN ILE HET PLP A 406 16 HET ACT A 407 4 HETNAM PLP PYRIDOXAL-5'-PHOSPHATE HETNAM ACT ACETATE ION HETSYN PLP VITAMIN B6 PHOSPHATE FORMUL 2 PLP C8 H10 N O6 P FORMUL 3 ACT C2 H3 O2 1- FORMUL 4 HOH *9(H2 O) HELIX 1 1 LYS A 3 LEU A 8 5 6 HELIX 2 2 ASP A 14 LYS A 24 1 11 HELIX 3 3 PHE A 49 TYR A 63 1 15 HELIX 4 4 THR A 74 GLY A 87 1 14 HELIX 5 5 GLY A 105 MET A 119 1 15 HELIX 6 6 TYR A 132 SER A 141 1 10 HELIX 7 7 ASN A 160 ILE A 171 1 12 HELIX 8 8 GLU A 192 LYS A 207 1 16 HELIX 9 9 GLU A 225 ASP A 227 5 3 HELIX 10 10 VAL A 228 GLU A 236 1 9 HELIX 11 11 ASN A 267 LYS A 284 1 18 HELIX 12 12 VAL A 290 ASN A 303 1 14 HELIX 13 13 ASN A 303 GLN A 336 1 34 HELIX 14 14 LYS A 337 ASN A 340 5 4 HELIX 15 15 ASP A 344 LYS A 349 5 6 HELIX 16 16 PRO A 359 ALA A 365 5 7 HELIX 17 17 SER A 384 ILE A 386 5 3 HELIX 18 18 ASN A 390 GLN A 404 1 15 SHEET 1 A 2 ILE A 32 ASN A 33 0 SHEET 2 A 2 ILE A 373 TYR A 374 1 O TYR A 374 N ILE A 32 SHEET 1 B 7 ILE A 98 ILE A 104 0 SHEET 2 B 7 ALA A 258 VAL A 264 -1 O GLY A 259 N CYS A 103 SHEET 3 B 7 PHE A 241 SER A 246 -1 N VAL A 243 O HIS A 262 SHEET 4 B 7 VAL A 209 ILE A 214 1 N PHE A 212 O SER A 242 SHEET 5 B 7 SER A 176 LEU A 179 1 N LEU A 179 O ASP A 213 SHEET 6 B 7 THR A 124 THR A 128 1 N TYR A 126 O SER A 176 SHEET 7 B 7 ASN A 145 ILE A 149 1 O ILE A 149 N VAL A 127 SHEET 1 C 2 PHE A 152 ASP A 153 0 SHEET 2 C 2 ASP A 158 ILE A 159 -1 O ASP A 158 N ASP A 153 SHEET 1 D 2 PHE A 355 PHE A 357 0 SHEET 2 D 2 ARG A 380 ASN A 382 -1 O ILE A 381 N SER A 356 CISPEP 1 LEU A 70 GLY A 71 0 8.32 CISPEP 2 ASN A 88 ASN A 89 0 -3.36 CISPEP 3 ASN A 129 PRO A 130 0 -3.38 CISPEP 4 ASN A 185 PRO A 186 0 7.04 SITE 1 AC1 12 TYR A 68 GLY A 105 GLY A 106 THR A 107 SITE 2 AC1 12 GLN A 180 ASN A 185 ASP A 213 TYR A 216 SITE 3 AC1 12 SER A 246 SER A 248 LYS A 249 ARG A 257 SITE 1 AC2 3 ILE A 326 ASN A 330 LYS A 349 CRYST1 100.838 100.838 240.367 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009917 0.005726 0.000000 0.00000 SCALE2 0.000000 0.011451 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004160 0.00000