data_3K8R # _entry.id 3K8R # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3K8R pdb_00003k8r 10.2210/pdb3k8r/pdb RCSB RCSB055688 ? ? WWPDB D_1000055688 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 391960 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3K8R _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-10-14 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of protein of unknown function (YP_427503.1) from Rhodospirillum rubrum ATCC 11170 at 2.75 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3K8R _cell.length_a 111.970 _cell.length_b 111.970 _cell.length_c 45.514 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 16 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3K8R _symmetry.Int_Tables_number 79 _symmetry.space_group_name_H-M 'I 4' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Uncharacterized protein' 13418.640 2 ? ? ? ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 3 water nat water 18.015 4 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)ADLTDALIDAALERGRSAHANEPRAAKARYDRSSARVIVDLENGCTFAFPPRLAQGLEGASDDQLCAVEILGQG YGLHWETLDVDLSLPGL(MSE)AGIFGTKAW(MSE)AKRAEPPPSAAKDAWSNLPR ; _entity_poly.pdbx_seq_one_letter_code_can ;GMADLTDALIDAALERGRSAHANEPRAAKARYDRSSARVIVDLENGCTFAFPPRLAQGLEGASDDQLCAVEILGQGYGLH WETLDVDLSLPGLMAGIFGTKAWMAKRAEPPPSAAKDAWSNLPR ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier 391960 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 ALA n 1 4 ASP n 1 5 LEU n 1 6 THR n 1 7 ASP n 1 8 ALA n 1 9 LEU n 1 10 ILE n 1 11 ASP n 1 12 ALA n 1 13 ALA n 1 14 LEU n 1 15 GLU n 1 16 ARG n 1 17 GLY n 1 18 ARG n 1 19 SER n 1 20 ALA n 1 21 HIS n 1 22 ALA n 1 23 ASN n 1 24 GLU n 1 25 PRO n 1 26 ARG n 1 27 ALA n 1 28 ALA n 1 29 LYS n 1 30 ALA n 1 31 ARG n 1 32 TYR n 1 33 ASP n 1 34 ARG n 1 35 SER n 1 36 SER n 1 37 ALA n 1 38 ARG n 1 39 VAL n 1 40 ILE n 1 41 VAL n 1 42 ASP n 1 43 LEU n 1 44 GLU n 1 45 ASN n 1 46 GLY n 1 47 CYS n 1 48 THR n 1 49 PHE n 1 50 ALA n 1 51 PHE n 1 52 PRO n 1 53 PRO n 1 54 ARG n 1 55 LEU n 1 56 ALA n 1 57 GLN n 1 58 GLY n 1 59 LEU n 1 60 GLU n 1 61 GLY n 1 62 ALA n 1 63 SER n 1 64 ASP n 1 65 ASP n 1 66 GLN n 1 67 LEU n 1 68 CYS n 1 69 ALA n 1 70 VAL n 1 71 GLU n 1 72 ILE n 1 73 LEU n 1 74 GLY n 1 75 GLN n 1 76 GLY n 1 77 TYR n 1 78 GLY n 1 79 LEU n 1 80 HIS n 1 81 TRP n 1 82 GLU n 1 83 THR n 1 84 LEU n 1 85 ASP n 1 86 VAL n 1 87 ASP n 1 88 LEU n 1 89 SER n 1 90 LEU n 1 91 PRO n 1 92 GLY n 1 93 LEU n 1 94 MSE n 1 95 ALA n 1 96 GLY n 1 97 ILE n 1 98 PHE n 1 99 GLY n 1 100 THR n 1 101 LYS n 1 102 ALA n 1 103 TRP n 1 104 MSE n 1 105 ALA n 1 106 LYS n 1 107 ARG n 1 108 ALA n 1 109 GLU n 1 110 PRO n 1 111 PRO n 1 112 PRO n 1 113 SER n 1 114 ALA n 1 115 ALA n 1 116 LYS n 1 117 ASP n 1 118 ALA n 1 119 TRP n 1 120 SER n 1 121 ASN n 1 122 LEU n 1 123 PRO n 1 124 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Rru_A2416 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 11170 / NCIB 8255' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Rhodospirillum rubrum ATCC 11170' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 269796 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q2RRM9_RHORT _struct_ref.pdbx_db_accession Q2RRM9 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MADLTDALIDAALERGRSAHANEPRAAKARYDRSSARVIVDLENGCTFAFPPRLAQGLEGASDDQLCAVEILGQGYGLHW ETLDVDLSLPGLMAGIFGTKAWMAKRAEPPPSAAKDAWSNLPR ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3K8R A 2 ? 124 ? Q2RRM9 1 ? 123 ? 1 123 2 1 3K8R B 2 ? 124 ? Q2RRM9 1 ? 123 ? 1 123 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3K8R GLY A 1 ? UNP Q2RRM9 ? ? 'expression tag' 0 1 2 3K8R GLY B 1 ? UNP Q2RRM9 ? ? 'expression tag' 0 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3K8R # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.66 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 53.72 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '20.0000% PEG-6000, 0.1M TRIS pH 8.0, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2009-07-08 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97932 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list 0.91837,0.97932 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3K8R _reflns.d_resolution_high 2.75 _reflns.d_resolution_low 28.855 _reflns.number_obs 7459 _reflns.pdbx_Rmerge_I_obs 0.076 _reflns.pdbx_netI_over_sigmaI 8.800 _reflns.percent_possible_obs 97.900 _reflns.B_iso_Wilson_estimate 75.246 _reflns.observed_criterion_sigma_I -3.00 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.75 2.85 2732 ? 1391 0.616 1.5 ? ? ? ? ? 94.90 1 1 2.85 2.96 2627 ? 1353 0.430 2.2 ? ? ? ? ? 99.20 2 1 2.96 3.10 2878 ? 1481 0.272 3.2 ? ? ? ? ? 98.30 3 1 3.10 3.26 2736 ? 1393 0.197 4.4 ? ? ? ? ? 98.70 4 1 3.26 3.46 2717 ? 1396 0.123 6.2 ? ? ? ? ? 98.50 5 1 3.46 3.73 2792 ? 1424 0.076 9.6 ? ? ? ? ? 98.50 6 1 3.73 4.10 2756 ? 1407 0.069 10.9 ? ? ? ? ? 97.80 7 1 4.10 4.69 2761 ? 1410 0.046 14.4 ? ? ? ? ? 98.10 8 1 4.69 5.88 2726 ? 1393 0.045 16.0 ? ? ? ? ? 97.90 9 1 5.88 28.855 2836 ? 1442 0.034 19.2 ? ? ? ? ? 97.60 10 1 # _refine.entry_id 3K8R _refine.ls_d_res_high 2.750 _refine.ls_d_res_low 28.855 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.520 _refine.ls_number_reflns_obs 7458 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1.HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2.ATOM RECORDS CONTAIN RESIDUAL B FACTORS ONLY. 3.A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4.1,2-ETHANEDIOL (EDO) FROM THE CRYOPROTECTANT HAS BEEN MODELED IN THE SOLVENT STRUCTURE. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.214 _refine.ls_R_factor_R_work 0.213 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.235 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.600 _refine.ls_number_reflns_R_free 344 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 32.511 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -2.390 _refine.aniso_B[2][2] -2.390 _refine.aniso_B[3][3] 4.790 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.934 _refine.correlation_coeff_Fo_to_Fc_free 0.925 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.474 _refine.pdbx_overall_ESU_R_Free 0.278 _refine.overall_SU_ML 0.211 _refine.overall_SU_B 24.860 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 68.61 _refine.B_iso_min 17.76 _refine.occupancy_max 1.00 _refine.occupancy_min 0.75 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1263 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 8 _refine_hist.number_atoms_solvent 4 _refine_hist.number_atoms_total 1275 _refine_hist.d_res_high 2.750 _refine_hist.d_res_low 28.855 # loop_ _refine_ls_restr.type _refine_ls_restr.pdbx_refine_id _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 'X-RAY DIFFRACTION' 1295 0.010 0.022 ? ? r_bond_other_d 'X-RAY DIFFRACTION' 879 0.001 0.020 ? ? r_angle_refined_deg 'X-RAY DIFFRACTION' 1752 1.492 1.967 ? ? r_angle_other_deg 'X-RAY DIFFRACTION' 2124 0.865 3.000 ? ? r_dihedral_angle_1_deg 'X-RAY DIFFRACTION' 166 3.411 5.000 ? ? r_dihedral_angle_2_deg 'X-RAY DIFFRACTION' 57 27.994 23.333 ? ? r_dihedral_angle_3_deg 'X-RAY DIFFRACTION' 198 11.715 15.000 ? ? r_dihedral_angle_4_deg 'X-RAY DIFFRACTION' 11 10.759 15.000 ? ? r_chiral_restr 'X-RAY DIFFRACTION' 190 0.080 0.200 ? ? r_gen_planes_refined 'X-RAY DIFFRACTION' 1471 0.006 0.021 ? ? r_gen_planes_other 'X-RAY DIFFRACTION' 272 0.001 0.020 ? ? r_mcbond_it 'X-RAY DIFFRACTION' 828 0.794 3.000 ? ? r_mcbond_other 'X-RAY DIFFRACTION' 344 0.206 3.000 ? ? r_mcangle_it 'X-RAY DIFFRACTION' 1303 1.528 5.000 ? ? r_scbond_it 'X-RAY DIFFRACTION' 467 2.709 8.000 ? ? r_scangle_it 'X-RAY DIFFRACTION' 449 3.703 11.000 ? ? # loop_ _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso 'X-RAY DIFFRACTION' 1 1 'MEDIUM POSITIONAL' A 1027 0.330 0.500 1 ? ? ? 'X-RAY DIFFRACTION' 1 1 'MEDIUM THERMAL' A 1027 0.440 2.000 2 ? ? ? # _refine_ls_shell.d_res_high 2.752 _refine_ls_shell.d_res_low 2.823 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 98.360 _refine_ls_shell.number_reflns_R_work 521 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.371 _refine_ls_shell.R_factor_R_free 0.610 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 18 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 539 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 A 1 2 B # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.selection_details _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id 1 1 1 4 A 23 A 103 ? . . . . . . . . 1 2 1 4 B 23 B 103 ? . . . . . . . . # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 3K8R _struct.title 'Crystal structure of protein of unknown function (YP_427503.1) from Rhodospirillum rubrum ATCC 11170 at 2.75 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text 'UNKNOWN FUNCTION, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2' _struct_keywords.pdbx_keywords 'Structural Genomics, Unknown function' _struct_keywords.entry_id 3K8R # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # _struct_biol.id 1 _struct_biol.details ;CRYSTAL PACKING ANALYSIS AND SIZE-EXCLUSION CHROMATOGRAPHY COUPLED WITH STATIC LIGHT SCATTERING SUPPORT THE ASSIGNMENT OF A DIMER AS THE SIGNIFICANT OLIGOMERIC FORM IN SOLUTION. ; # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 52 ? ALA A 56 ? PRO A 51 ALA A 55 5 ? 5 HELX_P HELX_P2 2 SER A 63 ? CYS A 68 ? SER A 62 CYS A 67 1 ? 6 HELX_P HELX_P3 3 LEU A 90 ? ALA A 95 ? LEU A 89 ALA A 94 1 ? 6 HELX_P HELX_P4 4 THR A 100 ? LYS A 106 ? THR A 99 LYS A 105 1 ? 7 HELX_P HELX_P5 5 PRO B 52 ? ALA B 56 ? PRO B 51 ALA B 55 5 ? 5 HELX_P HELX_P6 6 SER B 63 ? CYS B 68 ? SER B 62 CYS B 67 1 ? 6 HELX_P HELX_P7 7 LEU B 90 ? GLY B 96 ? LEU B 89 GLY B 95 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A LEU 93 C ? ? ? 1_555 A MSE 94 N ? ? A LEU 92 A MSE 93 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale2 covale both ? A MSE 94 C ? ? ? 1_555 A ALA 95 N ? ? A MSE 93 A ALA 94 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale3 covale both ? A TRP 103 C ? ? ? 1_555 A MSE 104 N ? ? A TRP 102 A MSE 103 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale4 covale both ? A MSE 104 C ? ? ? 1_555 A ALA 105 N ? ? A MSE 103 A ALA 104 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale5 covale both ? B LEU 93 C ? ? ? 1_555 B MSE 94 N ? ? B LEU 92 B MSE 93 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale6 covale both ? B MSE 94 C ? ? ? 1_555 B ALA 95 N ? ? B MSE 93 B ALA 94 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale7 covale both ? B TRP 103 C ? ? ? 1_555 B MSE 104 N ? ? B TRP 102 B MSE 103 1_555 ? ? ? ? ? ? ? 1.316 ? ? covale8 covale both ? B MSE 104 C ? ? ? 1_555 B ALA 105 N ? ? B MSE 103 B ALA 104 1_555 ? ? ? ? ? ? ? 1.325 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 3 ? C ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 27 ? ASP A 33 ? ALA A 26 ASP A 32 A 2 ARG A 38 ? LEU A 43 ? ARG A 37 LEU A 42 A 3 THR A 48 ? PHE A 51 ? THR A 47 PHE A 50 A 4 THR B 48 ? PHE B 51 ? THR B 47 PHE B 50 A 5 ARG B 38 ? LEU B 43 ? ARG B 37 LEU B 42 A 6 ALA B 27 ? ASP B 33 ? ALA B 26 ASP B 32 B 1 GLU A 71 ? LEU A 73 ? GLU A 70 LEU A 72 B 2 GLY A 78 ? TRP A 81 ? GLY A 77 TRP A 80 B 3 VAL A 86 ? SER A 89 ? VAL A 85 SER A 88 C 1 GLU B 71 ? LEU B 73 ? GLU B 70 LEU B 72 C 2 GLY B 78 ? TRP B 81 ? GLY B 77 TRP B 80 C 3 VAL B 86 ? SER B 89 ? VAL B 85 SER B 88 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ASP A 33 ? N ASP A 32 O ARG A 38 ? O ARG A 37 A 2 3 N VAL A 41 ? N VAL A 40 O PHE A 49 ? O PHE A 48 A 3 4 N ALA A 50 ? N ALA A 49 O THR B 48 ? O THR B 47 A 4 5 O PHE B 49 ? O PHE B 48 N VAL B 41 ? N VAL B 40 A 5 6 O ARG B 38 ? O ARG B 37 N ASP B 33 ? N ASP B 32 B 1 2 N GLU A 71 ? N GLU A 70 O HIS A 80 ? O HIS A 79 B 2 3 N LEU A 79 ? N LEU A 78 O LEU A 88 ? O LEU A 87 C 1 2 N GLU B 71 ? N GLU B 70 O HIS B 80 ? O HIS B 79 C 2 3 N LEU B 79 ? N LEU B 78 O LEU B 88 ? O LEU B 87 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A EDO 124 ? 3 'BINDING SITE FOR RESIDUE EDO A 124' AC2 Software A EDO 125 ? 3 'BINDING SITE FOR RESIDUE EDO A 125' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 ARG A 31 ? ARG A 30 . ? 1_555 ? 2 AC1 3 ASP A 42 ? ASP A 41 . ? 1_555 ? 3 AC1 3 LYS B 29 ? LYS B 28 . ? 6_444 ? 4 AC2 3 LEU A 88 ? LEU A 87 . ? 1_555 ? 5 AC2 3 SER A 89 ? SER A 88 . ? 1_555 ? 6 AC2 3 ILE A 97 ? ILE A 96 . ? 1_555 ? # _atom_sites.entry_id 3K8R _atom_sites.fract_transf_matrix[1][1] 0.008931 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008931 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021971 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 ? ? ? A . n A 1 3 ALA 3 2 ? ? ? A . n A 1 4 ASP 4 3 ? ? ? A . n A 1 5 LEU 5 4 ? ? ? A . n A 1 6 THR 6 5 ? ? ? A . n A 1 7 ASP 7 6 ? ? ? A . n A 1 8 ALA 8 7 ? ? ? A . n A 1 9 LEU 9 8 ? ? ? A . n A 1 10 ILE 10 9 ? ? ? A . n A 1 11 ASP 11 10 ? ? ? A . n A 1 12 ALA 12 11 ? ? ? A . n A 1 13 ALA 13 12 ? ? ? A . n A 1 14 LEU 14 13 ? ? ? A . n A 1 15 GLU 15 14 ? ? ? A . n A 1 16 ARG 16 15 ? ? ? A . n A 1 17 GLY 17 16 ? ? ? A . n A 1 18 ARG 18 17 ? ? ? A . n A 1 19 SER 19 18 ? ? ? A . n A 1 20 ALA 20 19 ? ? ? A . n A 1 21 HIS 21 20 ? ? ? A . n A 1 22 ALA 22 21 ? ? ? A . n A 1 23 ASN 23 22 ? ? ? A . n A 1 24 GLU 24 23 23 GLU GLU A . n A 1 25 PRO 25 24 24 PRO PRO A . n A 1 26 ARG 26 25 25 ARG ARG A . n A 1 27 ALA 27 26 26 ALA ALA A . n A 1 28 ALA 28 27 27 ALA ALA A . n A 1 29 LYS 29 28 28 LYS LYS A . n A 1 30 ALA 30 29 29 ALA ALA A . n A 1 31 ARG 31 30 30 ARG ARG A . n A 1 32 TYR 32 31 31 TYR TYR A . n A 1 33 ASP 33 32 32 ASP ASP A . n A 1 34 ARG 34 33 33 ARG ARG A . n A 1 35 SER 35 34 34 SER SER A . n A 1 36 SER 36 35 35 SER SER A . n A 1 37 ALA 37 36 36 ALA ALA A . n A 1 38 ARG 38 37 37 ARG ARG A . n A 1 39 VAL 39 38 38 VAL VAL A . n A 1 40 ILE 40 39 39 ILE ILE A . n A 1 41 VAL 41 40 40 VAL VAL A . n A 1 42 ASP 42 41 41 ASP ASP A . n A 1 43 LEU 43 42 42 LEU LEU A . n A 1 44 GLU 44 43 43 GLU GLU A . n A 1 45 ASN 45 44 44 ASN ASN A . n A 1 46 GLY 46 45 45 GLY GLY A . n A 1 47 CYS 47 46 46 CYS CYS A . n A 1 48 THR 48 47 47 THR THR A . n A 1 49 PHE 49 48 48 PHE PHE A . n A 1 50 ALA 50 49 49 ALA ALA A . n A 1 51 PHE 51 50 50 PHE PHE A . n A 1 52 PRO 52 51 51 PRO PRO A . n A 1 53 PRO 53 52 52 PRO PRO A . n A 1 54 ARG 54 53 53 ARG ARG A . n A 1 55 LEU 55 54 54 LEU LEU A . n A 1 56 ALA 56 55 55 ALA ALA A . n A 1 57 GLN 57 56 56 GLN GLN A . n A 1 58 GLY 58 57 57 GLY GLY A . n A 1 59 LEU 59 58 58 LEU LEU A . n A 1 60 GLU 60 59 59 GLU GLU A . n A 1 61 GLY 61 60 60 GLY GLY A . n A 1 62 ALA 62 61 61 ALA ALA A . n A 1 63 SER 63 62 62 SER SER A . n A 1 64 ASP 64 63 63 ASP ASP A . n A 1 65 ASP 65 64 64 ASP ASP A . n A 1 66 GLN 66 65 65 GLN GLN A . n A 1 67 LEU 67 66 66 LEU LEU A . n A 1 68 CYS 68 67 67 CYS CYS A . n A 1 69 ALA 69 68 68 ALA ALA A . n A 1 70 VAL 70 69 69 VAL VAL A . n A 1 71 GLU 71 70 70 GLU GLU A . n A 1 72 ILE 72 71 71 ILE ILE A . n A 1 73 LEU 73 72 72 LEU LEU A . n A 1 74 GLY 74 73 73 GLY GLY A . n A 1 75 GLN 75 74 74 GLN GLN A . n A 1 76 GLY 76 75 75 GLY GLY A . n A 1 77 TYR 77 76 76 TYR TYR A . n A 1 78 GLY 78 77 77 GLY GLY A . n A 1 79 LEU 79 78 78 LEU LEU A . n A 1 80 HIS 80 79 79 HIS HIS A . n A 1 81 TRP 81 80 80 TRP TRP A . n A 1 82 GLU 82 81 81 GLU GLU A . n A 1 83 THR 83 82 82 THR THR A . n A 1 84 LEU 84 83 83 LEU LEU A . n A 1 85 ASP 85 84 84 ASP ASP A . n A 1 86 VAL 86 85 85 VAL VAL A . n A 1 87 ASP 87 86 86 ASP ASP A . n A 1 88 LEU 88 87 87 LEU LEU A . n A 1 89 SER 89 88 88 SER SER A . n A 1 90 LEU 90 89 89 LEU LEU A . n A 1 91 PRO 91 90 90 PRO PRO A . n A 1 92 GLY 92 91 91 GLY GLY A . n A 1 93 LEU 93 92 92 LEU LEU A . n A 1 94 MSE 94 93 93 MSE MSE A . n A 1 95 ALA 95 94 94 ALA ALA A . n A 1 96 GLY 96 95 95 GLY GLY A . n A 1 97 ILE 97 96 96 ILE ILE A . n A 1 98 PHE 98 97 97 PHE PHE A . n A 1 99 GLY 99 98 98 GLY GLY A . n A 1 100 THR 100 99 99 THR THR A . n A 1 101 LYS 101 100 100 LYS LYS A . n A 1 102 ALA 102 101 101 ALA ALA A . n A 1 103 TRP 103 102 102 TRP TRP A . n A 1 104 MSE 104 103 103 MSE MSE A . n A 1 105 ALA 105 104 104 ALA ALA A . n A 1 106 LYS 106 105 105 LYS LYS A . n A 1 107 ARG 107 106 106 ARG ARG A . n A 1 108 ALA 108 107 107 ALA ALA A . n A 1 109 GLU 109 108 ? ? ? A . n A 1 110 PRO 110 109 ? ? ? A . n A 1 111 PRO 111 110 ? ? ? A . n A 1 112 PRO 112 111 ? ? ? A . n A 1 113 SER 113 112 ? ? ? A . n A 1 114 ALA 114 113 ? ? ? A . n A 1 115 ALA 115 114 ? ? ? A . n A 1 116 LYS 116 115 ? ? ? A . n A 1 117 ASP 117 116 ? ? ? A . n A 1 118 ALA 118 117 ? ? ? A . n A 1 119 TRP 119 118 ? ? ? A . n A 1 120 SER 120 119 ? ? ? A . n A 1 121 ASN 121 120 ? ? ? A . n A 1 122 LEU 122 121 ? ? ? A . n A 1 123 PRO 123 122 ? ? ? A . n A 1 124 ARG 124 123 ? ? ? A . n B 1 1 GLY 1 0 ? ? ? B . n B 1 2 MSE 2 1 ? ? ? B . n B 1 3 ALA 3 2 ? ? ? B . n B 1 4 ASP 4 3 ? ? ? B . n B 1 5 LEU 5 4 ? ? ? B . n B 1 6 THR 6 5 ? ? ? B . n B 1 7 ASP 7 6 ? ? ? B . n B 1 8 ALA 8 7 ? ? ? B . n B 1 9 LEU 9 8 ? ? ? B . n B 1 10 ILE 10 9 ? ? ? B . n B 1 11 ASP 11 10 ? ? ? B . n B 1 12 ALA 12 11 ? ? ? B . n B 1 13 ALA 13 12 ? ? ? B . n B 1 14 LEU 14 13 ? ? ? B . n B 1 15 GLU 15 14 ? ? ? B . n B 1 16 ARG 16 15 ? ? ? B . n B 1 17 GLY 17 16 ? ? ? B . n B 1 18 ARG 18 17 ? ? ? B . n B 1 19 SER 19 18 ? ? ? B . n B 1 20 ALA 20 19 ? ? ? B . n B 1 21 HIS 21 20 ? ? ? B . n B 1 22 ALA 22 21 ? ? ? B . n B 1 23 ASN 23 22 22 ASN ASN B . n B 1 24 GLU 24 23 23 GLU GLU B . n B 1 25 PRO 25 24 24 PRO PRO B . n B 1 26 ARG 26 25 25 ARG ARG B . n B 1 27 ALA 27 26 26 ALA ALA B . n B 1 28 ALA 28 27 27 ALA ALA B . n B 1 29 LYS 29 28 28 LYS LYS B . n B 1 30 ALA 30 29 29 ALA ALA B . n B 1 31 ARG 31 30 30 ARG ARG B . n B 1 32 TYR 32 31 31 TYR TYR B . n B 1 33 ASP 33 32 32 ASP ASP B . n B 1 34 ARG 34 33 33 ARG ARG B . n B 1 35 SER 35 34 34 SER SER B . n B 1 36 SER 36 35 35 SER SER B . n B 1 37 ALA 37 36 36 ALA ALA B . n B 1 38 ARG 38 37 37 ARG ARG B . n B 1 39 VAL 39 38 38 VAL VAL B . n B 1 40 ILE 40 39 39 ILE ILE B . n B 1 41 VAL 41 40 40 VAL VAL B . n B 1 42 ASP 42 41 41 ASP ASP B . n B 1 43 LEU 43 42 42 LEU LEU B . n B 1 44 GLU 44 43 43 GLU GLU B . n B 1 45 ASN 45 44 44 ASN ASN B . n B 1 46 GLY 46 45 45 GLY GLY B . n B 1 47 CYS 47 46 46 CYS CYS B . n B 1 48 THR 48 47 47 THR THR B . n B 1 49 PHE 49 48 48 PHE PHE B . n B 1 50 ALA 50 49 49 ALA ALA B . n B 1 51 PHE 51 50 50 PHE PHE B . n B 1 52 PRO 52 51 51 PRO PRO B . n B 1 53 PRO 53 52 52 PRO PRO B . n B 1 54 ARG 54 53 53 ARG ARG B . n B 1 55 LEU 55 54 54 LEU LEU B . n B 1 56 ALA 56 55 55 ALA ALA B . n B 1 57 GLN 57 56 56 GLN GLN B . n B 1 58 GLY 58 57 57 GLY GLY B . n B 1 59 LEU 59 58 58 LEU LEU B . n B 1 60 GLU 60 59 59 GLU GLU B . n B 1 61 GLY 61 60 60 GLY GLY B . n B 1 62 ALA 62 61 61 ALA ALA B . n B 1 63 SER 63 62 62 SER SER B . n B 1 64 ASP 64 63 63 ASP ASP B . n B 1 65 ASP 65 64 64 ASP ASP B . n B 1 66 GLN 66 65 65 GLN GLN B . n B 1 67 LEU 67 66 66 LEU LEU B . n B 1 68 CYS 68 67 67 CYS CYS B . n B 1 69 ALA 69 68 68 ALA ALA B . n B 1 70 VAL 70 69 69 VAL VAL B . n B 1 71 GLU 71 70 70 GLU GLU B . n B 1 72 ILE 72 71 71 ILE ILE B . n B 1 73 LEU 73 72 72 LEU LEU B . n B 1 74 GLY 74 73 73 GLY GLY B . n B 1 75 GLN 75 74 74 GLN GLN B . n B 1 76 GLY 76 75 75 GLY GLY B . n B 1 77 TYR 77 76 76 TYR TYR B . n B 1 78 GLY 78 77 77 GLY GLY B . n B 1 79 LEU 79 78 78 LEU LEU B . n B 1 80 HIS 80 79 79 HIS HIS B . n B 1 81 TRP 81 80 80 TRP TRP B . n B 1 82 GLU 82 81 81 GLU GLU B . n B 1 83 THR 83 82 82 THR THR B . n B 1 84 LEU 84 83 83 LEU LEU B . n B 1 85 ASP 85 84 84 ASP ASP B . n B 1 86 VAL 86 85 85 VAL VAL B . n B 1 87 ASP 87 86 86 ASP ASP B . n B 1 88 LEU 88 87 87 LEU LEU B . n B 1 89 SER 89 88 88 SER SER B . n B 1 90 LEU 90 89 89 LEU LEU B . n B 1 91 PRO 91 90 90 PRO PRO B . n B 1 92 GLY 92 91 91 GLY GLY B . n B 1 93 LEU 93 92 92 LEU LEU B . n B 1 94 MSE 94 93 93 MSE MSE B . n B 1 95 ALA 95 94 94 ALA ALA B . n B 1 96 GLY 96 95 95 GLY GLY B . n B 1 97 ILE 97 96 96 ILE ILE B . n B 1 98 PHE 98 97 97 PHE PHE B . n B 1 99 GLY 99 98 98 GLY GLY B . n B 1 100 THR 100 99 99 THR THR B . n B 1 101 LYS 101 100 100 LYS LYS B . n B 1 102 ALA 102 101 101 ALA ALA B . n B 1 103 TRP 103 102 102 TRP TRP B . n B 1 104 MSE 104 103 103 MSE MSE B . n B 1 105 ALA 105 104 104 ALA ALA B . n B 1 106 LYS 106 105 ? ? ? B . n B 1 107 ARG 107 106 ? ? ? B . n B 1 108 ALA 108 107 ? ? ? B . n B 1 109 GLU 109 108 ? ? ? B . n B 1 110 PRO 110 109 ? ? ? B . n B 1 111 PRO 111 110 ? ? ? B . n B 1 112 PRO 112 111 ? ? ? B . n B 1 113 SER 113 112 ? ? ? B . n B 1 114 ALA 114 113 ? ? ? B . n B 1 115 ALA 115 114 ? ? ? B . n B 1 116 LYS 116 115 ? ? ? B . n B 1 117 ASP 117 116 ? ? ? B . n B 1 118 ALA 118 117 ? ? ? B . n B 1 119 TRP 119 118 ? ? ? B . n B 1 120 SER 120 119 ? ? ? B . n B 1 121 ASN 121 120 ? ? ? B . n B 1 122 LEU 122 121 ? ? ? B . n B 1 123 PRO 123 122 ? ? ? B . n B 1 124 ARG 124 123 ? ? ? B . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO 1 124 1 EDO EDO A . D 2 EDO 1 125 2 EDO EDO A . E 3 HOH 1 126 5 HOH HOH A . F 3 HOH 1 124 3 HOH HOH B . F 3 HOH 2 125 4 HOH HOH B . F 3 HOH 3 126 6 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 94 A MSE 93 ? MET SELENOMETHIONINE 2 A MSE 104 A MSE 103 ? MET SELENOMETHIONINE 3 B MSE 94 B MSE 93 ? MET SELENOMETHIONINE 4 B MSE 104 B MSE 103 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1390 ? 1 MORE -5 ? 1 'SSA (A^2)' 9000 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-10-27 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2019-07-17 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Author supporting evidence' 4 3 'Structure model' 'Refinement description' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' 8 5 'Structure model' 'Database references' 9 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_struct_assembly_auth_evidence 2 3 'Structure model' software 3 4 'Structure model' software 4 4 'Structure model' struct_conn 5 5 'Structure model' database_2 6 5 'Structure model' struct_ref_seq_dif 7 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -23.8975 -42.1200 -26.0183 0.1403 0.0779 0.2068 -0.0335 -0.0249 -0.0241 1.7923 6.2388 2.7885 -1.1450 -0.9982 -1.5336 0.0352 -0.0289 -0.0063 0.0978 -0.3408 -0.2434 -0.0546 0.0340 -0.0472 'X-RAY DIFFRACTION' 2 ? refined -41.5801 -31.6988 -16.9487 0.1181 0.1577 0.1263 -0.0861 -0.0293 0.0025 6.0896 4.5596 4.6565 -2.6957 -1.1185 2.6139 0.0194 -0.2757 0.2563 0.2670 -0.3153 0.6669 0.1559 0.4493 -0.4750 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 23 A 107 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 B 22 B 104 ? . . . . ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.5.0053 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 5 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? 7 SHELXD . ? ? ? ? phasing ? ? ? 8 autoSHARP . ? ? ? ? phasing ? ? ? 9 # _pdbx_entry_details.entry_id 3K8R _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CB _pdbx_validate_rmsd_bond.auth_asym_id_1 B _pdbx_validate_rmsd_bond.auth_comp_id_1 CYS _pdbx_validate_rmsd_bond.auth_seq_id_1 67 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 SG _pdbx_validate_rmsd_bond.auth_asym_id_2 B _pdbx_validate_rmsd_bond.auth_comp_id_2 CYS _pdbx_validate_rmsd_bond.auth_seq_id_2 67 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.699 _pdbx_validate_rmsd_bond.bond_target_value 1.812 _pdbx_validate_rmsd_bond.bond_deviation -0.113 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.016 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 106 ? ? -147.29 48.44 2 1 ARG B 53 ? ? -92.28 41.17 3 1 MSE B 103 ? ? -95.44 58.63 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 74 ? CG ? A GLN 75 CG 2 1 Y 1 A GLN 74 ? CD ? A GLN 75 CD 3 1 Y 1 A GLN 74 ? OE1 ? A GLN 75 OE1 4 1 Y 1 A GLN 74 ? NE2 ? A GLN 75 NE2 5 1 Y 1 A LYS 105 ? CG ? A LYS 106 CG 6 1 Y 1 A LYS 105 ? CD ? A LYS 106 CD 7 1 Y 1 A LYS 105 ? CE ? A LYS 106 CE 8 1 Y 1 A LYS 105 ? NZ ? A LYS 106 NZ 9 1 Y 1 B LYS 100 ? CE ? B LYS 101 CE 10 1 Y 1 B LYS 100 ? NZ ? B LYS 101 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A MSE 1 ? A MSE 2 3 1 Y 1 A ALA 2 ? A ALA 3 4 1 Y 1 A ASP 3 ? A ASP 4 5 1 Y 1 A LEU 4 ? A LEU 5 6 1 Y 1 A THR 5 ? A THR 6 7 1 Y 1 A ASP 6 ? A ASP 7 8 1 Y 1 A ALA 7 ? A ALA 8 9 1 Y 1 A LEU 8 ? A LEU 9 10 1 Y 1 A ILE 9 ? A ILE 10 11 1 Y 1 A ASP 10 ? A ASP 11 12 1 Y 1 A ALA 11 ? A ALA 12 13 1 Y 1 A ALA 12 ? A ALA 13 14 1 Y 1 A LEU 13 ? A LEU 14 15 1 Y 1 A GLU 14 ? A GLU 15 16 1 Y 1 A ARG 15 ? A ARG 16 17 1 Y 1 A GLY 16 ? A GLY 17 18 1 Y 1 A ARG 17 ? A ARG 18 19 1 Y 1 A SER 18 ? A SER 19 20 1 Y 1 A ALA 19 ? A ALA 20 21 1 Y 1 A HIS 20 ? A HIS 21 22 1 Y 1 A ALA 21 ? A ALA 22 23 1 Y 1 A ASN 22 ? A ASN 23 24 1 Y 1 A GLU 108 ? A GLU 109 25 1 Y 1 A PRO 109 ? A PRO 110 26 1 Y 1 A PRO 110 ? A PRO 111 27 1 Y 1 A PRO 111 ? A PRO 112 28 1 Y 1 A SER 112 ? A SER 113 29 1 Y 1 A ALA 113 ? A ALA 114 30 1 Y 1 A ALA 114 ? A ALA 115 31 1 Y 1 A LYS 115 ? A LYS 116 32 1 Y 1 A ASP 116 ? A ASP 117 33 1 Y 1 A ALA 117 ? A ALA 118 34 1 Y 1 A TRP 118 ? A TRP 119 35 1 Y 1 A SER 119 ? A SER 120 36 1 Y 1 A ASN 120 ? A ASN 121 37 1 Y 1 A LEU 121 ? A LEU 122 38 1 Y 1 A PRO 122 ? A PRO 123 39 1 Y 1 A ARG 123 ? A ARG 124 40 1 Y 1 B GLY 0 ? B GLY 1 41 1 Y 1 B MSE 1 ? B MSE 2 42 1 Y 1 B ALA 2 ? B ALA 3 43 1 Y 1 B ASP 3 ? B ASP 4 44 1 Y 1 B LEU 4 ? B LEU 5 45 1 Y 1 B THR 5 ? B THR 6 46 1 Y 1 B ASP 6 ? B ASP 7 47 1 Y 1 B ALA 7 ? B ALA 8 48 1 Y 1 B LEU 8 ? B LEU 9 49 1 Y 1 B ILE 9 ? B ILE 10 50 1 Y 1 B ASP 10 ? B ASP 11 51 1 Y 1 B ALA 11 ? B ALA 12 52 1 Y 1 B ALA 12 ? B ALA 13 53 1 Y 1 B LEU 13 ? B LEU 14 54 1 Y 1 B GLU 14 ? B GLU 15 55 1 Y 1 B ARG 15 ? B ARG 16 56 1 Y 1 B GLY 16 ? B GLY 17 57 1 Y 1 B ARG 17 ? B ARG 18 58 1 Y 1 B SER 18 ? B SER 19 59 1 Y 1 B ALA 19 ? B ALA 20 60 1 Y 1 B HIS 20 ? B HIS 21 61 1 Y 1 B ALA 21 ? B ALA 22 62 1 Y 1 B LYS 105 ? B LYS 106 63 1 Y 1 B ARG 106 ? B ARG 107 64 1 Y 1 B ALA 107 ? B ALA 108 65 1 Y 1 B GLU 108 ? B GLU 109 66 1 Y 1 B PRO 109 ? B PRO 110 67 1 Y 1 B PRO 110 ? B PRO 111 68 1 Y 1 B PRO 111 ? B PRO 112 69 1 Y 1 B SER 112 ? B SER 113 70 1 Y 1 B ALA 113 ? B ALA 114 71 1 Y 1 B ALA 114 ? B ALA 115 72 1 Y 1 B LYS 115 ? B LYS 116 73 1 Y 1 B ASP 116 ? B ASP 117 74 1 Y 1 B ALA 117 ? B ALA 118 75 1 Y 1 B TRP 118 ? B TRP 119 76 1 Y 1 B SER 119 ? B SER 120 77 1 Y 1 B ASN 120 ? B ASN 121 78 1 Y 1 B LEU 121 ? B LEU 122 79 1 Y 1 B PRO 122 ? B PRO 123 80 1 Y 1 B ARG 123 ? B ARG 124 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 water HOH # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 'gel filtration' ? 2 1 'light scattering' ? #