data_3K9P # _entry.id 3K9P # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3K9P RCSB RCSB055722 WWPDB D_1000055722 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3K9O _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3K9P _pdbx_database_status.recvd_initial_deposition_date 2009-10-16 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kang, G.B.' 1 'Ko, S.' 2 'Song, S.M.' 3 'Lee, W.' 4 'Eom, S.H.' 5 # _citation.id primary _citation.title 'Structural basis of E2-25K/UBB+1 interaction leading to proteasome inhibition and neurotoxicity' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 285 _citation.page_first 36070 _citation.page_last 36080 _citation.year 2010 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20826778 _citation.pdbx_database_id_DOI 10.1074/jbc.M110.145219 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Ko, S.' 1 primary 'Kang, G.B.' 2 primary 'Song, S.M.' 3 primary 'Lee, J.-G.' 4 primary 'Shin, D.Y.' 5 primary 'Yun, J.-H.' 6 primary 'Sheng, Y.' 7 primary 'Cheong, C.' 8 primary 'Jeon, Y.H.' 9 primary 'Jung, Y.-K.' 10 primary 'Arrowsmith, C.H.' 11 primary 'Avvakumov, G.V.' 12 primary 'Dhe-Paganon, S.' 13 primary 'Yoo, Y.J.' 14 primary 'Eom, S.H.' 15 primary 'Lee, W.' 16 # _cell.entry_id 3K9P _cell.length_a 43.554 _cell.length_b 50.974 _cell.length_c 63.906 _cell.angle_alpha 90.00 _cell.angle_beta 102.62 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3K9P _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ubiquitin-conjugating enzyme E2 K' 24094.465 1 6.3.2.19 ? ? ? 2 polymer man Ubiquitin 8859.106 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Ubiquitin-conjugating enzyme E2-25 kDa, E2(25K), E2-25K, Ubiquitin-protein ligase, Ubiquitin carrier protein, Huntingtin-interacting protein 2, HIP-2 ; # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSHMASMTGGQQMGRGSMANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIP ETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQ TARLWAHVYAGAPVSSPEYTKKIENLCAMGFDRNAVIVALSSKSWDVETATELLLSN ; ;GSHMASMTGGQQMGRGSMANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIP ETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQ TARLWAHVYAGAPVSSPEYTKKIENLCAMGFDRNAVIVALSSKSWDVETATELLLSN ; A ? 2 'polypeptide(L)' no no GSHMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG GSHMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 ALA n 1 6 SER n 1 7 MET n 1 8 THR n 1 9 GLY n 1 10 GLY n 1 11 GLN n 1 12 GLN n 1 13 MET n 1 14 GLY n 1 15 ARG n 1 16 GLY n 1 17 SER n 1 18 MET n 1 19 ALA n 1 20 ASN n 1 21 ILE n 1 22 ALA n 1 23 VAL n 1 24 GLN n 1 25 ARG n 1 26 ILE n 1 27 LYS n 1 28 ARG n 1 29 GLU n 1 30 PHE n 1 31 LYS n 1 32 GLU n 1 33 VAL n 1 34 LEU n 1 35 LYS n 1 36 SER n 1 37 GLU n 1 38 GLU n 1 39 THR n 1 40 SER n 1 41 LYS n 1 42 ASN n 1 43 GLN n 1 44 ILE n 1 45 LYS n 1 46 VAL n 1 47 ASP n 1 48 LEU n 1 49 VAL n 1 50 ASP n 1 51 GLU n 1 52 ASN n 1 53 PHE n 1 54 THR n 1 55 GLU n 1 56 LEU n 1 57 ARG n 1 58 GLY n 1 59 GLU n 1 60 ILE n 1 61 ALA n 1 62 GLY n 1 63 PRO n 1 64 PRO n 1 65 ASP n 1 66 THR n 1 67 PRO n 1 68 TYR n 1 69 GLU n 1 70 GLY n 1 71 GLY n 1 72 ARG n 1 73 TYR n 1 74 GLN n 1 75 LEU n 1 76 GLU n 1 77 ILE n 1 78 LYS n 1 79 ILE n 1 80 PRO n 1 81 GLU n 1 82 THR n 1 83 TYR n 1 84 PRO n 1 85 PHE n 1 86 ASN n 1 87 PRO n 1 88 PRO n 1 89 LYS n 1 90 VAL n 1 91 ARG n 1 92 PHE n 1 93 ILE n 1 94 THR n 1 95 LYS n 1 96 ILE n 1 97 TRP n 1 98 HIS n 1 99 PRO n 1 100 ASN n 1 101 ILE n 1 102 SER n 1 103 SER n 1 104 VAL n 1 105 THR n 1 106 GLY n 1 107 ALA n 1 108 ILE n 1 109 CYS n 1 110 LEU n 1 111 ASP n 1 112 ILE n 1 113 LEU n 1 114 LYS n 1 115 ASP n 1 116 GLN n 1 117 TRP n 1 118 ALA n 1 119 ALA n 1 120 ALA n 1 121 MET n 1 122 THR n 1 123 LEU n 1 124 ARG n 1 125 THR n 1 126 VAL n 1 127 LEU n 1 128 LEU n 1 129 SER n 1 130 LEU n 1 131 GLN n 1 132 ALA n 1 133 LEU n 1 134 LEU n 1 135 ALA n 1 136 ALA n 1 137 ALA n 1 138 GLU n 1 139 PRO n 1 140 ASP n 1 141 ASP n 1 142 PRO n 1 143 GLN n 1 144 ASP n 1 145 ALA n 1 146 VAL n 1 147 VAL n 1 148 ALA n 1 149 ASN n 1 150 GLN n 1 151 TYR n 1 152 LYS n 1 153 GLN n 1 154 ASN n 1 155 PRO n 1 156 GLU n 1 157 MET n 1 158 PHE n 1 159 LYS n 1 160 GLN n 1 161 THR n 1 162 ALA n 1 163 ARG n 1 164 LEU n 1 165 TRP n 1 166 ALA n 1 167 HIS n 1 168 VAL n 1 169 TYR n 1 170 ALA n 1 171 GLY n 1 172 ALA n 1 173 PRO n 1 174 VAL n 1 175 SER n 1 176 SER n 1 177 PRO n 1 178 GLU n 1 179 TYR n 1 180 THR n 1 181 LYS n 1 182 LYS n 1 183 ILE n 1 184 GLU n 1 185 ASN n 1 186 LEU n 1 187 CYS n 1 188 ALA n 1 189 MET n 1 190 GLY n 1 191 PHE n 1 192 ASP n 1 193 ARG n 1 194 ASN n 1 195 ALA n 1 196 VAL n 1 197 ILE n 1 198 VAL n 1 199 ALA n 1 200 LEU n 1 201 SER n 1 202 SER n 1 203 LYS n 1 204 SER n 1 205 TRP n 1 206 ASP n 1 207 VAL n 1 208 GLU n 1 209 THR n 1 210 ALA n 1 211 THR n 1 212 GLU n 1 213 LEU n 1 214 LEU n 1 215 LEU n 1 216 SER n 1 217 ASN n 2 1 GLY n 2 2 SER n 2 3 HIS n 2 4 MET n 2 5 GLN n 2 6 ILE n 2 7 PHE n 2 8 VAL n 2 9 LYS n 2 10 THR n 2 11 LEU n 2 12 THR n 2 13 GLY n 2 14 LYS n 2 15 THR n 2 16 ILE n 2 17 THR n 2 18 LEU n 2 19 GLU n 2 20 VAL n 2 21 GLU n 2 22 PRO n 2 23 SER n 2 24 ASP n 2 25 THR n 2 26 ILE n 2 27 GLU n 2 28 ASN n 2 29 VAL n 2 30 LYS n 2 31 ALA n 2 32 LYS n 2 33 ILE n 2 34 GLN n 2 35 ASP n 2 36 LYS n 2 37 GLU n 2 38 GLY n 2 39 ILE n 2 40 PRO n 2 41 PRO n 2 42 ASP n 2 43 GLN n 2 44 GLN n 2 45 ARG n 2 46 LEU n 2 47 ILE n 2 48 PHE n 2 49 ALA n 2 50 GLY n 2 51 LYS n 2 52 GLN n 2 53 LEU n 2 54 GLU n 2 55 ASP n 2 56 GLY n 2 57 ARG n 2 58 THR n 2 59 LEU n 2 60 SER n 2 61 ASP n 2 62 TYR n 2 63 ASN n 2 64 ILE n 2 65 GLN n 2 66 LYS n 2 67 GLU n 2 68 SER n 2 69 THR n 2 70 LEU n 2 71 HIS n 2 72 LEU n 2 73 VAL n 2 74 LEU n 2 75 ARG n 2 76 LEU n 2 77 ARG n 2 78 GLY n 2 79 GLY n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? human ? 'UBE2K, HIP2, LIG' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? human ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP UBE2K_HUMAN P61086 1 ;MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW HPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGAPVSSP EYTKKIENLCAMGFDRNAVIVALSSKSWDVETATELLLSN ; 1 ? 2 UNP UBIQ_HUMAN P62988 2 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3K9P A 18 ? 217 ? P61086 1 ? 200 ? 1 200 2 2 3K9P B 4 ? 79 ? P62988 1 ? 76 ? 1 76 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3K9P GLY A 1 ? UNP P61086 ? ? 'EXPRESSION TAG' -16 1 1 3K9P SER A 2 ? UNP P61086 ? ? 'EXPRESSION TAG' -15 2 1 3K9P HIS A 3 ? UNP P61086 ? ? 'EXPRESSION TAG' -14 3 1 3K9P MET A 4 ? UNP P61086 ? ? 'EXPRESSION TAG' -13 4 1 3K9P ALA A 5 ? UNP P61086 ? ? 'EXPRESSION TAG' -12 5 1 3K9P SER A 6 ? UNP P61086 ? ? 'EXPRESSION TAG' -11 6 1 3K9P MET A 7 ? UNP P61086 ? ? 'EXPRESSION TAG' -10 7 1 3K9P THR A 8 ? UNP P61086 ? ? 'EXPRESSION TAG' -9 8 1 3K9P GLY A 9 ? UNP P61086 ? ? 'EXPRESSION TAG' -8 9 1 3K9P GLY A 10 ? UNP P61086 ? ? 'EXPRESSION TAG' -7 10 1 3K9P GLN A 11 ? UNP P61086 ? ? 'EXPRESSION TAG' -6 11 1 3K9P GLN A 12 ? UNP P61086 ? ? 'EXPRESSION TAG' -5 12 1 3K9P MET A 13 ? UNP P61086 ? ? 'EXPRESSION TAG' -4 13 1 3K9P GLY A 14 ? UNP P61086 ? ? 'EXPRESSION TAG' -3 14 1 3K9P ARG A 15 ? UNP P61086 ? ? 'EXPRESSION TAG' -2 15 1 3K9P GLY A 16 ? UNP P61086 ? ? 'EXPRESSION TAG' -1 16 1 3K9P SER A 17 ? UNP P61086 ? ? 'EXPRESSION TAG' 0 17 2 3K9P GLY B 1 ? UNP P62988 ? ? 'EXPRESSION TAG' -2 18 2 3K9P SER B 2 ? UNP P62988 ? ? 'EXPRESSION TAG' -1 19 2 3K9P HIS B 3 ? UNP P62988 ? ? 'EXPRESSION TAG' 0 20 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3K9P _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.10 _exptl_crystal.density_percent_sol 41.45 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '100mM HEPES-NaOH (pH 7.5), 25% (w/v) PEG 3350, 50mM Sodium Fluoride, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2008-02-27 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'DOUBLE CRYSTAL MONOCHROMATOR' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PAL/PLS BEAMLINE 4A' _diffrn_source.pdbx_synchrotron_site PAL/PLS _diffrn_source.pdbx_synchrotron_beamline 4A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0000 # _reflns.entry_id 3K9P _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.8 _reflns.number_obs 6522 _reflns.number_all 6522 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.8 _reflns_shell.d_res_low 2.85 _reflns_shell.percent_possible_all 99.4 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3K9P _refine.ls_number_reflns_obs 6522 _refine.ls_number_reflns_all 6522 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 42.50 _refine.ls_d_res_high 2.8 _refine.ls_percent_reflns_obs 94.700 _refine.ls_R_factor_obs 0.232 _refine.ls_R_factor_all 0.282 _refine.ls_R_factor_R_work 0.232 _refine.ls_R_factor_R_free 0.296 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.300 _refine.ls_number_reflns_R_free 711 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 47.289 _refine.aniso_B[1][1] -16.326 _refine.aniso_B[2][2] 23.281 _refine.aniso_B[3][3] -6.955 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] -31.012 _refine.aniso_B[2][3] 0.000 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 82.78 _refine.B_iso_min 19.60 _refine.occupancy_max 1.00 _refine.occupancy_min 1.00 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2137 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2137 _refine_hist.d_res_high 2.8 _refine_hist.d_res_low 42.50 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.010 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.536 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 2.8 _refine_ls_shell.d_res_low 2.97 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.329 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.434 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 844 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 CNS_TOPPAR:protein_rep.param ? 'X-RAY DIFFRACTION' 2 CNS_TOPPAR:water_rep.param ? # _struct.entry_id 3K9P _struct.title 'The crystal structure of E2-25K and ubiquitin complex' _struct.pdbx_descriptor 'Ubiquitin-conjugating enzyme E2 K (E.C.6.3.2.19), Ubiquitin' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3K9P _struct_keywords.pdbx_keywords 'LIGASE/SIGNALING PROTEIN' _struct_keywords.text ;E2-25K, ubiquitin, complex structure, ATP-binding, Isopeptide bond, Ligase, Nucleotide-binding, Ubl conjugation pathway, Nucleus, Phosphoprotein, LIGASE-SIGNALING PROTEIN complex ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 22 ? LYS A 35 ? ALA A 5 LYS A 18 1 ? 14 HELX_P HELX_P2 2 SER A 36 ? LYS A 41 ? SER A 19 LYS A 24 1 ? 6 HELX_P HELX_P3 3 LEU A 110 ? LYS A 114 ? LEU A 93 LYS A 97 5 ? 5 HELX_P HELX_P4 4 THR A 122 ? ALA A 136 ? THR A 105 ALA A 119 1 ? 15 HELX_P HELX_P5 5 ASP A 144 ? ASN A 154 ? ASP A 127 ASN A 137 1 ? 11 HELX_P HELX_P6 6 ASN A 154 ? GLY A 171 ? ASN A 137 GLY A 154 1 ? 18 HELX_P HELX_P7 7 SER A 176 ? ALA A 188 ? SER A 159 ALA A 171 1 ? 13 HELX_P HELX_P8 8 ASP A 192 ? LYS A 203 ? ASP A 175 LYS A 186 1 ? 12 HELX_P HELX_P9 9 ASP A 206 ? LEU A 214 ? ASP A 189 LEU A 197 1 ? 9 HELX_P HELX_P10 10 THR B 25 ? GLY B 38 ? THR B 22 GLY B 35 1 ? 14 HELX_P HELX_P11 11 PRO B 40 ? GLN B 44 ? PRO B 37 GLN B 41 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 44 ? LEU A 48 ? ILE A 27 LEU A 31 A 2 GLU A 55 ? ALA A 61 ? GLU A 38 ALA A 44 A 3 ARG A 72 ? LYS A 78 ? ARG A 55 LYS A 61 A 4 LYS A 89 ? PHE A 92 ? LYS A 72 PHE A 75 B 1 THR B 15 ? GLU B 19 ? THR B 12 GLU B 16 B 2 GLN B 5 ? THR B 10 ? GLN B 2 THR B 7 B 3 THR B 69 ? LEU B 72 ? THR B 66 LEU B 69 B 4 LEU B 46 ? ILE B 47 ? LEU B 43 ILE B 44 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ASP A 47 ? N ASP A 30 O ARG A 57 ? O ARG A 40 A 2 3 N GLY A 58 ? N GLY A 41 O LEU A 75 ? O LEU A 58 A 3 4 N GLU A 76 ? N GLU A 59 O ARG A 91 ? O ARG A 74 B 1 2 O ILE B 16 ? O ILE B 13 N VAL B 8 ? N VAL B 5 B 2 3 N PHE B 7 ? N PHE B 4 O LEU B 70 ? O LEU B 67 B 3 4 O HIS B 71 ? O HIS B 68 N ILE B 47 ? N ILE B 44 # _database_PDB_matrix.entry_id 3K9P _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3K9P _atom_sites.fract_transf_matrix[1][1] 0.022960 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005141 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019618 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016035 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -16 ? ? ? A . n A 1 2 SER 2 -15 ? ? ? A . n A 1 3 HIS 3 -14 ? ? ? A . n A 1 4 MET 4 -13 ? ? ? A . n A 1 5 ALA 5 -12 ? ? ? A . n A 1 6 SER 6 -11 ? ? ? A . n A 1 7 MET 7 -10 ? ? ? A . n A 1 8 THR 8 -9 ? ? ? A . n A 1 9 GLY 9 -8 ? ? ? A . n A 1 10 GLY 10 -7 ? ? ? A . n A 1 11 GLN 11 -6 ? ? ? A . n A 1 12 GLN 12 -5 ? ? ? A . n A 1 13 MET 13 -4 ? ? ? A . n A 1 14 GLY 14 -3 ? ? ? A . n A 1 15 ARG 15 -2 ? ? ? A . n A 1 16 GLY 16 -1 ? ? ? A . n A 1 17 SER 17 0 ? ? ? A . n A 1 18 MET 18 1 1 MET MET A . n A 1 19 ALA 19 2 2 ALA ALA A . n A 1 20 ASN 20 3 3 ASN ASN A . n A 1 21 ILE 21 4 4 ILE ILE A . n A 1 22 ALA 22 5 5 ALA ALA A . n A 1 23 VAL 23 6 6 VAL VAL A . n A 1 24 GLN 24 7 7 GLN GLN A . n A 1 25 ARG 25 8 8 ARG ARG A . n A 1 26 ILE 26 9 9 ILE ILE A . n A 1 27 LYS 27 10 10 LYS LYS A . n A 1 28 ARG 28 11 11 ARG ARG A . n A 1 29 GLU 29 12 12 GLU GLU A . n A 1 30 PHE 30 13 13 PHE PHE A . n A 1 31 LYS 31 14 14 LYS LYS A . n A 1 32 GLU 32 15 15 GLU GLU A . n A 1 33 VAL 33 16 16 VAL VAL A . n A 1 34 LEU 34 17 17 LEU LEU A . n A 1 35 LYS 35 18 18 LYS LYS A . n A 1 36 SER 36 19 19 SER SER A . n A 1 37 GLU 37 20 20 GLU GLU A . n A 1 38 GLU 38 21 21 GLU GLU A . n A 1 39 THR 39 22 22 THR THR A . n A 1 40 SER 40 23 23 SER SER A . n A 1 41 LYS 41 24 24 LYS LYS A . n A 1 42 ASN 42 25 25 ASN ASN A . n A 1 43 GLN 43 26 26 GLN GLN A . n A 1 44 ILE 44 27 27 ILE ILE A . n A 1 45 LYS 45 28 28 LYS LYS A . n A 1 46 VAL 46 29 29 VAL VAL A . n A 1 47 ASP 47 30 30 ASP ASP A . n A 1 48 LEU 48 31 31 LEU LEU A . n A 1 49 VAL 49 32 32 VAL VAL A . n A 1 50 ASP 50 33 33 ASP ASP A . n A 1 51 GLU 51 34 34 GLU GLU A . n A 1 52 ASN 52 35 35 ASN ASN A . n A 1 53 PHE 53 36 36 PHE PHE A . n A 1 54 THR 54 37 37 THR THR A . n A 1 55 GLU 55 38 38 GLU GLU A . n A 1 56 LEU 56 39 39 LEU LEU A . n A 1 57 ARG 57 40 40 ARG ARG A . n A 1 58 GLY 58 41 41 GLY GLY A . n A 1 59 GLU 59 42 42 GLU GLU A . n A 1 60 ILE 60 43 43 ILE ILE A . n A 1 61 ALA 61 44 44 ALA ALA A . n A 1 62 GLY 62 45 45 GLY GLY A . n A 1 63 PRO 63 46 46 PRO PRO A . n A 1 64 PRO 64 47 47 PRO PRO A . n A 1 65 ASP 65 48 48 ASP ASP A . n A 1 66 THR 66 49 49 THR THR A . n A 1 67 PRO 67 50 50 PRO PRO A . n A 1 68 TYR 68 51 51 TYR TYR A . n A 1 69 GLU 69 52 52 GLU GLU A . n A 1 70 GLY 70 53 53 GLY GLY A . n A 1 71 GLY 71 54 54 GLY GLY A . n A 1 72 ARG 72 55 55 ARG ARG A . n A 1 73 TYR 73 56 56 TYR TYR A . n A 1 74 GLN 74 57 57 GLN GLN A . n A 1 75 LEU 75 58 58 LEU LEU A . n A 1 76 GLU 76 59 59 GLU GLU A . n A 1 77 ILE 77 60 60 ILE ILE A . n A 1 78 LYS 78 61 61 LYS LYS A . n A 1 79 ILE 79 62 62 ILE ILE A . n A 1 80 PRO 80 63 63 PRO PRO A . n A 1 81 GLU 81 64 64 GLU GLU A . n A 1 82 THR 82 65 65 THR THR A . n A 1 83 TYR 83 66 66 TYR TYR A . n A 1 84 PRO 84 67 67 PRO PRO A . n A 1 85 PHE 85 68 68 PHE PHE A . n A 1 86 ASN 86 69 69 ASN ASN A . n A 1 87 PRO 87 70 70 PRO PRO A . n A 1 88 PRO 88 71 71 PRO PRO A . n A 1 89 LYS 89 72 72 LYS LYS A . n A 1 90 VAL 90 73 73 VAL VAL A . n A 1 91 ARG 91 74 74 ARG ARG A . n A 1 92 PHE 92 75 75 PHE PHE A . n A 1 93 ILE 93 76 76 ILE ILE A . n A 1 94 THR 94 77 77 THR THR A . n A 1 95 LYS 95 78 78 LYS LYS A . n A 1 96 ILE 96 79 79 ILE ILE A . n A 1 97 TRP 97 80 80 TRP TRP A . n A 1 98 HIS 98 81 81 HIS HIS A . n A 1 99 PRO 99 82 82 PRO PRO A . n A 1 100 ASN 100 83 83 ASN ASN A . n A 1 101 ILE 101 84 84 ILE ILE A . n A 1 102 SER 102 85 85 SER SER A . n A 1 103 SER 103 86 86 SER SER A . n A 1 104 VAL 104 87 87 VAL VAL A . n A 1 105 THR 105 88 88 THR THR A . n A 1 106 GLY 106 89 89 GLY GLY A . n A 1 107 ALA 107 90 90 ALA ALA A . n A 1 108 ILE 108 91 91 ILE ILE A . n A 1 109 CYS 109 92 92 CYS CYS A . n A 1 110 LEU 110 93 93 LEU LEU A . n A 1 111 ASP 111 94 94 ASP ASP A . n A 1 112 ILE 112 95 95 ILE ILE A . n A 1 113 LEU 113 96 96 LEU LEU A . n A 1 114 LYS 114 97 97 LYS LYS A . n A 1 115 ASP 115 98 98 ASP ASP A . n A 1 116 GLN 116 99 99 GLN GLN A . n A 1 117 TRP 117 100 100 TRP TRP A . n A 1 118 ALA 118 101 101 ALA ALA A . n A 1 119 ALA 119 102 102 ALA ALA A . n A 1 120 ALA 120 103 103 ALA ALA A . n A 1 121 MET 121 104 104 MET MET A . n A 1 122 THR 122 105 105 THR THR A . n A 1 123 LEU 123 106 106 LEU LEU A . n A 1 124 ARG 124 107 107 ARG ARG A . n A 1 125 THR 125 108 108 THR THR A . n A 1 126 VAL 126 109 109 VAL VAL A . n A 1 127 LEU 127 110 110 LEU LEU A . n A 1 128 LEU 128 111 111 LEU LEU A . n A 1 129 SER 129 112 112 SER SER A . n A 1 130 LEU 130 113 113 LEU LEU A . n A 1 131 GLN 131 114 114 GLN GLN A . n A 1 132 ALA 132 115 115 ALA ALA A . n A 1 133 LEU 133 116 116 LEU LEU A . n A 1 134 LEU 134 117 117 LEU LEU A . n A 1 135 ALA 135 118 118 ALA ALA A . n A 1 136 ALA 136 119 119 ALA ALA A . n A 1 137 ALA 137 120 120 ALA ALA A . n A 1 138 GLU 138 121 121 GLU GLU A . n A 1 139 PRO 139 122 122 PRO PRO A . n A 1 140 ASP 140 123 123 ASP ASP A . n A 1 141 ASP 141 124 124 ASP ASP A . n A 1 142 PRO 142 125 125 PRO PRO A . n A 1 143 GLN 143 126 126 GLN GLN A . n A 1 144 ASP 144 127 127 ASP ASP A . n A 1 145 ALA 145 128 128 ALA ALA A . n A 1 146 VAL 146 129 129 VAL VAL A . n A 1 147 VAL 147 130 130 VAL VAL A . n A 1 148 ALA 148 131 131 ALA ALA A . n A 1 149 ASN 149 132 132 ASN ASN A . n A 1 150 GLN 150 133 133 GLN GLN A . n A 1 151 TYR 151 134 134 TYR TYR A . n A 1 152 LYS 152 135 135 LYS LYS A . n A 1 153 GLN 153 136 136 GLN GLN A . n A 1 154 ASN 154 137 137 ASN ASN A . n A 1 155 PRO 155 138 138 PRO PRO A . n A 1 156 GLU 156 139 139 GLU GLU A . n A 1 157 MET 157 140 140 MET MET A . n A 1 158 PHE 158 141 141 PHE PHE A . n A 1 159 LYS 159 142 142 LYS LYS A . n A 1 160 GLN 160 143 143 GLN GLN A . n A 1 161 THR 161 144 144 THR THR A . n A 1 162 ALA 162 145 145 ALA ALA A . n A 1 163 ARG 163 146 146 ARG ARG A . n A 1 164 LEU 164 147 147 LEU LEU A . n A 1 165 TRP 165 148 148 TRP TRP A . n A 1 166 ALA 166 149 149 ALA ALA A . n A 1 167 HIS 167 150 150 HIS HIS A . n A 1 168 VAL 168 151 151 VAL VAL A . n A 1 169 TYR 169 152 152 TYR TYR A . n A 1 170 ALA 170 153 153 ALA ALA A . n A 1 171 GLY 171 154 154 GLY GLY A . n A 1 172 ALA 172 155 155 ALA ALA A . n A 1 173 PRO 173 156 156 PRO PRO A . n A 1 174 VAL 174 157 157 VAL VAL A . n A 1 175 SER 175 158 158 SER SER A . n A 1 176 SER 176 159 159 SER SER A . n A 1 177 PRO 177 160 160 PRO PRO A . n A 1 178 GLU 178 161 161 GLU GLU A . n A 1 179 TYR 179 162 162 TYR TYR A . n A 1 180 THR 180 163 163 THR THR A . n A 1 181 LYS 181 164 164 LYS LYS A . n A 1 182 LYS 182 165 165 LYS LYS A . n A 1 183 ILE 183 166 166 ILE ILE A . n A 1 184 GLU 184 167 167 GLU GLU A . n A 1 185 ASN 185 168 168 ASN ASN A . n A 1 186 LEU 186 169 169 LEU LEU A . n A 1 187 CYS 187 170 170 CYS CYS A . n A 1 188 ALA 188 171 171 ALA ALA A . n A 1 189 MET 189 172 172 MET MET A . n A 1 190 GLY 190 173 173 GLY GLY A . n A 1 191 PHE 191 174 174 PHE PHE A . n A 1 192 ASP 192 175 175 ASP ASP A . n A 1 193 ARG 193 176 176 ARG ARG A . n A 1 194 ASN 194 177 177 ASN ASN A . n A 1 195 ALA 195 178 178 ALA ALA A . n A 1 196 VAL 196 179 179 VAL VAL A . n A 1 197 ILE 197 180 180 ILE ILE A . n A 1 198 VAL 198 181 181 VAL VAL A . n A 1 199 ALA 199 182 182 ALA ALA A . n A 1 200 LEU 200 183 183 LEU LEU A . n A 1 201 SER 201 184 184 SER SER A . n A 1 202 SER 202 185 185 SER SER A . n A 1 203 LYS 203 186 186 LYS LYS A . n A 1 204 SER 204 187 187 SER SER A . n A 1 205 TRP 205 188 188 TRP TRP A . n A 1 206 ASP 206 189 189 ASP ASP A . n A 1 207 VAL 207 190 190 VAL VAL A . n A 1 208 GLU 208 191 191 GLU GLU A . n A 1 209 THR 209 192 192 THR THR A . n A 1 210 ALA 210 193 193 ALA ALA A . n A 1 211 THR 211 194 194 THR THR A . n A 1 212 GLU 212 195 195 GLU GLU A . n A 1 213 LEU 213 196 196 LEU LEU A . n A 1 214 LEU 214 197 197 LEU LEU A . n A 1 215 LEU 215 198 198 LEU LEU A . n A 1 216 SER 216 199 199 SER SER A . n A 1 217 ASN 217 200 ? ? ? A . n B 2 1 GLY 1 -2 ? ? ? B . n B 2 2 SER 2 -1 ? ? ? B . n B 2 3 HIS 3 0 ? ? ? B . n B 2 4 MET 4 1 1 MET MET B . n B 2 5 GLN 5 2 2 GLN GLN B . n B 2 6 ILE 6 3 3 ILE ILE B . n B 2 7 PHE 7 4 4 PHE PHE B . n B 2 8 VAL 8 5 5 VAL VAL B . n B 2 9 LYS 9 6 6 LYS LYS B . n B 2 10 THR 10 7 7 THR THR B . n B 2 11 LEU 11 8 8 LEU LEU B . n B 2 12 THR 12 9 9 THR THR B . n B 2 13 GLY 13 10 10 GLY GLY B . n B 2 14 LYS 14 11 11 LYS LYS B . n B 2 15 THR 15 12 12 THR THR B . n B 2 16 ILE 16 13 13 ILE ILE B . n B 2 17 THR 17 14 14 THR THR B . n B 2 18 LEU 18 15 15 LEU LEU B . n B 2 19 GLU 19 16 16 GLU GLU B . n B 2 20 VAL 20 17 17 VAL VAL B . n B 2 21 GLU 21 18 18 GLU GLU B . n B 2 22 PRO 22 19 19 PRO PRO B . n B 2 23 SER 23 20 20 SER SER B . n B 2 24 ASP 24 21 21 ASP ASP B . n B 2 25 THR 25 22 22 THR THR B . n B 2 26 ILE 26 23 23 ILE ILE B . n B 2 27 GLU 27 24 24 GLU GLU B . n B 2 28 ASN 28 25 25 ASN ASN B . n B 2 29 VAL 29 26 26 VAL VAL B . n B 2 30 LYS 30 27 27 LYS LYS B . n B 2 31 ALA 31 28 28 ALA ALA B . n B 2 32 LYS 32 29 29 LYS LYS B . n B 2 33 ILE 33 30 30 ILE ILE B . n B 2 34 GLN 34 31 31 GLN GLN B . n B 2 35 ASP 35 32 32 ASP ASP B . n B 2 36 LYS 36 33 33 LYS LYS B . n B 2 37 GLU 37 34 34 GLU GLU B . n B 2 38 GLY 38 35 35 GLY GLY B . n B 2 39 ILE 39 36 36 ILE ILE B . n B 2 40 PRO 40 37 37 PRO PRO B . n B 2 41 PRO 41 38 38 PRO PRO B . n B 2 42 ASP 42 39 39 ASP ASP B . n B 2 43 GLN 43 40 40 GLN GLN B . n B 2 44 GLN 44 41 41 GLN GLN B . n B 2 45 ARG 45 42 42 ARG ARG B . n B 2 46 LEU 46 43 43 LEU LEU B . n B 2 47 ILE 47 44 44 ILE ILE B . n B 2 48 PHE 48 45 45 PHE PHE B . n B 2 49 ALA 49 46 46 ALA ALA B . n B 2 50 GLY 50 47 47 GLY GLY B . n B 2 51 LYS 51 48 48 LYS LYS B . n B 2 52 GLN 52 49 49 GLN GLN B . n B 2 53 LEU 53 50 50 LEU LEU B . n B 2 54 GLU 54 51 51 GLU GLU B . n B 2 55 ASP 55 52 52 ASP ASP B . n B 2 56 GLY 56 53 53 GLY GLY B . n B 2 57 ARG 57 54 54 ARG ARG B . n B 2 58 THR 58 55 55 THR THR B . n B 2 59 LEU 59 56 56 LEU LEU B . n B 2 60 SER 60 57 57 SER SER B . n B 2 61 ASP 61 58 58 ASP ASP B . n B 2 62 TYR 62 59 59 TYR TYR B . n B 2 63 ASN 63 60 60 ASN ASN B . n B 2 64 ILE 64 61 61 ILE ILE B . n B 2 65 GLN 65 62 62 GLN GLN B . n B 2 66 LYS 66 63 63 LYS LYS B . n B 2 67 GLU 67 64 64 GLU GLU B . n B 2 68 SER 68 65 65 SER SER B . n B 2 69 THR 69 66 66 THR THR B . n B 2 70 LEU 70 67 67 LEU LEU B . n B 2 71 HIS 71 68 68 HIS HIS B . n B 2 72 LEU 72 69 69 LEU LEU B . n B 2 73 VAL 73 70 70 VAL VAL B . n B 2 74 LEU 74 71 71 LEU LEU B . n B 2 75 ARG 75 72 72 ARG ALA B . n B 2 76 LEU 76 73 ? ? ? B . n B 2 77 ARG 77 74 ? ? ? B . n B 2 78 GLY 78 75 ? ? ? B . n B 2 79 GLY 79 76 ? ? ? B . n # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 software_defined_assembly PISA monomeric 1 3 software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B 2 1 A 3 1 B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-09-08 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 MOLREP phasing . ? 2 CNS refinement 1.1 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 C _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 GLU _pdbx_validate_rmsd_angle.auth_seq_id_1 121 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 N _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 PRO _pdbx_validate_rmsd_angle.auth_seq_id_2 122 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CA _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 PRO _pdbx_validate_rmsd_angle.auth_seq_id_3 122 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 128.71 _pdbx_validate_rmsd_angle.angle_target_value 119.30 _pdbx_validate_rmsd_angle.angle_deviation 9.41 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.50 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 4 ? ? -35.74 -88.24 2 1 GLN A 7 ? ? -111.73 68.89 3 1 ARG A 8 ? ? -173.43 -45.76 4 1 PHE A 36 ? ? 79.86 46.60 5 1 TYR A 66 ? ? -66.15 -83.67 6 1 VAL A 87 ? ? -140.59 20.60 7 1 THR A 88 ? ? -152.92 -21.01 8 1 LYS A 97 ? ? -129.27 -107.50 9 1 GLN A 99 ? ? -70.88 20.88 10 1 ALA A 102 ? ? -49.60 -77.52 11 1 ALA A 103 ? ? -89.61 49.68 12 1 GLN A 126 ? ? -132.03 -32.25 13 1 ASN A 137 ? ? 177.11 55.40 14 1 PRO A 138 ? ? -45.08 -17.65 15 1 PRO A 156 ? ? -61.20 -132.26 16 1 LEU A 198 ? ? -111.88 76.09 17 1 ASP B 39 ? ? -48.55 -12.32 18 1 ASP B 52 ? ? -37.66 -28.50 19 1 ASN B 60 ? ? 71.90 37.13 20 1 GLU B 64 ? ? 76.29 -2.96 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B ARG 72 ? CG ? B ARG 75 CG 2 1 Y 1 B ARG 72 ? CD ? B ARG 75 CD 3 1 Y 1 B ARG 72 ? NE ? B ARG 75 NE 4 1 Y 1 B ARG 72 ? CZ ? B ARG 75 CZ 5 1 Y 1 B ARG 72 ? NH1 ? B ARG 75 NH1 6 1 Y 1 B ARG 72 ? NH2 ? B ARG 75 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -16 ? A GLY 1 2 1 Y 1 A SER -15 ? A SER 2 3 1 Y 1 A HIS -14 ? A HIS 3 4 1 Y 1 A MET -13 ? A MET 4 5 1 Y 1 A ALA -12 ? A ALA 5 6 1 Y 1 A SER -11 ? A SER 6 7 1 Y 1 A MET -10 ? A MET 7 8 1 Y 1 A THR -9 ? A THR 8 9 1 Y 1 A GLY -8 ? A GLY 9 10 1 Y 1 A GLY -7 ? A GLY 10 11 1 Y 1 A GLN -6 ? A GLN 11 12 1 Y 1 A GLN -5 ? A GLN 12 13 1 Y 1 A MET -4 ? A MET 13 14 1 Y 1 A GLY -3 ? A GLY 14 15 1 Y 1 A ARG -2 ? A ARG 15 16 1 Y 1 A GLY -1 ? A GLY 16 17 1 Y 1 A SER 0 ? A SER 17 18 1 Y 1 A ASN 200 ? A ASN 217 19 1 Y 1 B GLY -2 ? B GLY 1 20 1 Y 1 B SER -1 ? B SER 2 21 1 Y 1 B HIS 0 ? B HIS 3 22 1 Y 1 B LEU 73 ? B LEU 76 23 1 Y 1 B ARG 74 ? B ARG 77 24 1 Y 1 B GLY 75 ? B GLY 78 25 1 Y 1 B GLY 76 ? B GLY 79 #