HEADER LYASE 20-OCT-09 3KBR TITLE THE CRYSTAL STRUCTURE OF CYCLOHEXADIENYL DEHYDRATASE PRECURSOR FROM TITLE 2 PSEUDOMONAS AERUGINOSA PA01 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYCLOHEXADIENYL DEHYDRATASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PREPHENATE DEHYDRATASE, AROGENATE DEHYDRATASE; COMPND 5 EC: 4.2.1.51, 4.2.1.91; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 STRAIN: PA01; SOURCE 5 GENE: PA3475, PHEC, PSEUDOMONAS AERUGINOSA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: PPK1037; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG9 KEYWDS CYCLOHEXADIENYL DEHYDRATASE PRECURSOR, PSEUDOMONAS AERUGINOSA PA01, KEYWDS 2 STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE INITIATIVE, MIDWEST KEYWDS 3 CENTER FOR STRUCTURAL GENOMICS, MCSG, AMINO-ACID BIOSYNTHESIS, KEYWDS 4 AROMATIC AMINO ACID BIOSYNTHESIS, LYASE, MULTIFUNCTIONAL ENZYME, KEYWDS 5 PHENYLALANINE BIOSYNTHESIS EXPDTA X-RAY DIFFRACTION AUTHOR K.TAN,N.MARSHALL,K.BUCK,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (MCSG) REVDAT 3 09-OCT-24 3KBR 1 REMARK LINK REVDAT 2 13-JUL-11 3KBR 1 VERSN REVDAT 1 10-NOV-09 3KBR 0 JRNL AUTH K.TAN,N.MARSHALL,K.BUCK,A.JOACHIMIAK JRNL TITL THE CRYSTAL STRUCTURE OF CYCLOHEXADIENYL DEHYDRATASE JRNL TITL 2 PRECURSOR FROM PSEUDOMONAS AERUGINOSA PA01 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.66 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.5_2) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.66 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.73 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.900 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 62026 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 3159 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.7360 - 3.5715 0.97 5796 287 0.1587 0.1660 REMARK 3 2 3.5715 - 2.8356 1.00 5942 341 0.1783 0.2157 REMARK 3 3 2.8356 - 2.4774 1.00 5959 305 0.1826 0.2286 REMARK 3 4 2.4774 - 2.2510 1.00 5981 302 0.1734 0.2365 REMARK 3 5 2.2510 - 2.0897 1.00 5959 342 0.1769 0.1990 REMARK 3 6 2.0897 - 1.9665 1.00 5890 343 0.1900 0.2334 REMARK 3 7 1.9665 - 1.8680 1.00 5976 317 0.2062 0.2475 REMARK 3 8 1.8680 - 1.7867 1.00 5954 307 0.2390 0.2699 REMARK 3 9 1.7867 - 1.7180 0.99 5861 305 0.2692 0.3204 REMARK 3 10 1.7180 - 1.6587 0.92 5549 310 0.2914 0.3061 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 53.05 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.550 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2010 REMARK 3 ANGLE : 1.031 2715 REMARK 3 CHIRALITY : 0.066 289 REMARK 3 PLANARITY : 0.004 353 REMARK 3 DIHEDRAL : 17.097 780 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A RESID 124:215 REMARK 3 ORIGIN FOR THE GROUP (A): 27.7168 17.3742 36.6360 REMARK 3 T TENSOR REMARK 3 T11: 0.1811 T22: 0.2452 REMARK 3 T33: 0.2360 T12: 0.0077 REMARK 3 T13: 0.0350 T23: 0.0045 REMARK 3 L TENSOR REMARK 3 L11: 1.6635 L22: 1.7498 REMARK 3 L33: 0.9851 L12: -0.2676 REMARK 3 L13: 0.0520 L23: 0.2118 REMARK 3 S TENSOR REMARK 3 S11: 0.0083 S12: 0.0992 S13: 0.0580 REMARK 3 S21: -0.0065 S22: -0.0374 S23: -0.3589 REMARK 3 S31: 0.0518 S32: 0.1511 S33: 0.0259 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3KBR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-OCT-09. REMARK 100 THE DEPOSITION ID IS D_1000055792. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-AUG-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97948 REMARK 200 MONOCHROMATOR : SI 111 CRYSTAL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32048 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.659 REMARK 200 RESOLUTION RANGE LOW (A) : 28.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 37.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.66 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : 0.79500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.750 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD, MLPHARE, HKL-3000, DM REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.005M COCL2 HEXAHYDRATE, 0.005M NICL2 REMARK 280 HEXAHYDRATE, 0.005M CACL2 DIHYDRATE, 0.005M MGCL2 HEXAHYDRATE, REMARK 280 0.1M HEPES, 12% W/V PEG 3350, PH 7.5, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 63.19500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 36.48565 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 29.66033 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 63.19500 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 36.48565 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 29.66033 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 63.19500 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 36.48565 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 29.66033 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 63.19500 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 36.48565 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 29.66033 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 63.19500 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 36.48565 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 29.66033 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 63.19500 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 36.48565 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 29.66033 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 72.97130 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 59.32067 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 72.97130 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 59.32067 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 72.97130 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 59.32067 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 72.97130 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 59.32067 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 72.97130 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 59.32067 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 72.97130 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 59.32067 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: EXPERIMENTALLY UNKNOWN. IT IS PREDICTED TO BE MONOMERIC. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 26010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 55580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -68.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 4 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 88.98100 REMARK 350 BIOMT1 5 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 88.98100 REMARK 350 BIOMT1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 88.98100 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 23 REMARK 465 ASN A 24 REMARK 465 ALA A 25 REMARK 465 GLN A 26 REMARK 465 GLN A 216 REMARK 465 GLU A 259 REMARK 465 TYR A 260 REMARK 465 ARG A 261 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 102 38.37 -170.44 REMARK 500 ASP A 123 -142.86 -144.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 1 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 134 OE1 REMARK 620 2 GLU A 134 OE2 53.4 REMARK 620 3 HIS A 213 NE2 141.3 88.1 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 262 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 263 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 264 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 265 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE A 266 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC37816.1 RELATED DB: TARGETDB DBREF 3KBR A 26 261 UNP Q01269 PHEC_PSEAE 26 261 SEQADV 3KBR SER A 23 UNP Q01269 EXPRESSION TAG SEQADV 3KBR ASN A 24 UNP Q01269 EXPRESSION TAG SEQADV 3KBR ALA A 25 UNP Q01269 EXPRESSION TAG SEQRES 1 A 239 SER ASN ALA GLN GLU SER ARG LEU ASP ARG ILE LEU GLU SEQRES 2 A 239 SER GLY VAL LEU ARG VAL ALA THR THR GLY ASP TYR LYS SEQRES 3 A 239 PRO PHE SER TYR ARG THR GLU GLU GLY GLY TYR ALA GLY SEQRES 4 A 239 PHE ASP VAL ASP MSE ALA GLN ARG LEU ALA GLU SER LEU SEQRES 5 A 239 GLY ALA LYS LEU VAL VAL VAL PRO THR SER TRP PRO ASN SEQRES 6 A 239 LEU MSE ARG ASP PHE ALA ASP ASP ARG PHE ASP ILE ALA SEQRES 7 A 239 MSE SER GLY ILE SER ILE ASN LEU GLU ARG GLN ARG GLN SEQRES 8 A 239 ALA TYR PHE SER ILE PRO TYR LEU ARG ASP GLY LYS THR SEQRES 9 A 239 PRO ILE THR LEU CYS SER GLU GLU ALA ARG PHE GLN THR SEQRES 10 A 239 LEU GLU GLN ILE ASP GLN PRO GLY VAL THR ALA ILE VAL SEQRES 11 A 239 ASN PRO GLY GLY THR ASN GLU LYS PHE ALA ARG ALA ASN SEQRES 12 A 239 LEU LYS LYS ALA ARG ILE LEU VAL HIS PRO ASP ASN VAL SEQRES 13 A 239 THR ILE PHE GLN GLN ILE VAL ASP GLY LYS ALA ASP LEU SEQRES 14 A 239 MSE MSE THR ASP ALA ILE GLU ALA ARG LEU GLN SER ARG SEQRES 15 A 239 LEU HIS PRO GLU LEU CYS ALA VAL HIS PRO GLN GLN PRO SEQRES 16 A 239 PHE ASP PHE ALA GLU LYS ALA TYR LEU LEU PRO ARG ASP SEQRES 17 A 239 GLU ALA PHE LYS ARG TYR VAL ASP GLN TRP LEU HIS ILE SEQRES 18 A 239 ALA GLU GLN SER GLY LEU LEU ARG GLN ARG MSE GLU HIS SEQRES 19 A 239 TRP LEU GLU TYR ARG MODRES 3KBR MSE A 66 MET SELENOMETHIONINE MODRES 3KBR MSE A 89 MET SELENOMETHIONINE MODRES 3KBR MSE A 101 MET SELENOMETHIONINE MODRES 3KBR MSE A 192 MET SELENOMETHIONINE MODRES 3KBR MSE A 193 MET SELENOMETHIONINE MODRES 3KBR MSE A 254 MET SELENOMETHIONINE HET MSE A 66 8 HET MSE A 89 8 HET MSE A 101 8 HET MSE A 192 8 HET MSE A 193 8 HET MSE A 254 8 HET NI A 1 1 HET CL A 262 1 HET GOL A 263 6 HET GOL A 2 6 HET GOL A 3 6 HET FMT A 265 3 HET GOL A 4 6 HET GOL A 5 6 HET FMT A 264 3 HET EPE A 266 15 HETNAM MSE SELENOMETHIONINE HETNAM NI NICKEL (II) ION HETNAM CL CHLORIDE ION HETNAM GOL GLYCEROL HETNAM FMT FORMIC ACID HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EPE HEPES FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 2 NI NI 2+ FORMUL 3 CL CL 1- FORMUL 4 GOL 5(C3 H8 O3) FORMUL 7 FMT 2(C H2 O2) FORMUL 11 EPE C8 H18 N2 O4 S FORMUL 12 HOH *163(H2 O) HELIX 1 1 SER A 28 GLY A 37 1 10 HELIX 2 2 GLY A 61 LEU A 74 1 14 HELIX 3 3 ASN A 87 ASP A 94 1 8 HELIX 4 4 ASN A 107 ARG A 112 1 6 HELIX 5 5 SER A 132 GLN A 138 5 7 HELIX 6 6 THR A 139 ASP A 144 1 6 HELIX 7 7 GLY A 156 LEU A 166 1 11 HELIX 8 8 THR A 179 ASP A 186 1 8 HELIX 9 9 ALA A 196 HIS A 206 1 11 HELIX 10 10 ASP A 230 SER A 247 1 18 HELIX 11 11 GLY A 248 LEU A 258 1 11 SHEET 1 A 3 LYS A 77 PRO A 82 0 SHEET 2 A 3 VAL A 38 THR A 43 1 N VAL A 41 O VAL A 81 SHEET 3 A 3 ILE A 99 ALA A 100 1 O ILE A 99 N ALA A 42 SHEET 1 B 3 ASP A 46 TYR A 47 0 SHEET 2 B 3 SER A 51 ARG A 53 -1 O SER A 51 N TYR A 47 SHEET 3 B 3 TYR A 59 ALA A 60 -1 O ALA A 60 N TYR A 52 SHEET 1 C 2 TYR A 115 PHE A 116 0 SHEET 2 C 2 LEU A 226 LEU A 227 -1 O LEU A 227 N TYR A 115 SHEET 1 D 2 LEU A 121 ASP A 123 0 SHEET 2 D 2 ALA A 221 LYS A 223 -1 O ALA A 221 N ASP A 123 SHEET 1 E 3 LEU A 191 ASP A 195 0 SHEET 2 E 3 LYS A 125 LEU A 130 -1 N ILE A 128 O MSE A 192 SHEET 3 E 3 LEU A 209 ALA A 211 -1 O CYS A 210 N THR A 129 SHEET 1 F 2 THR A 149 VAL A 152 0 SHEET 2 F 2 ARG A 170 VAL A 173 1 O ARG A 170 N ALA A 150 SSBOND 1 CYS A 131 CYS A 210 1555 1555 2.04 LINK C ASP A 65 N MSE A 66 1555 1555 1.33 LINK C MSE A 66 N ALA A 67 1555 1555 1.33 LINK C LEU A 88 N MSE A 89 1555 1555 1.33 LINK C MSE A 89 N ARG A 90 1555 1555 1.33 LINK C ALA A 100 N MSE A 101 1555 1555 1.32 LINK C MSE A 101 N SER A 102 1555 1555 1.33 LINK C LEU A 191 N MSE A 192 1555 1555 1.33 LINK C MSE A 192 N MSE A 193 1555 1555 1.33 LINK C MSE A 193 N THR A 194 1555 1555 1.32 LINK C ARG A 253 N MSE A 254 1555 1555 1.33 LINK C MSE A 254 N GLU A 255 1555 1555 1.33 LINK NI NI A 1 OE1 GLU A 134 1555 1555 2.53 LINK NI NI A 1 OE2 GLU A 134 1555 1555 2.35 LINK NI NI A 1 NE2 HIS A 213 1555 1555 2.28 CISPEP 1 LYS A 48 PRO A 49 0 8.35 SITE 1 AC1 5 GLU A 134 HIS A 213 HIS A 256 CL A 262 SITE 2 AC1 5 HOH A 394 SITE 1 AC2 6 NI A 1 GLU A 134 CYS A 210 HIS A 213 SITE 2 AC2 6 HIS A 256 HOH A 412 SITE 1 AC3 4 ASP A 219 ALA A 221 HOH A 324 HOH A 359 SITE 1 AC4 4 GLU A 27 ASP A 31 ARG A 32 GLU A 35 SITE 1 AC5 5 GLU A 27 SER A 28 ASP A 230 GLU A 231 SITE 2 AC5 5 ALA A 232 SITE 1 AC6 6 LEU A 34 GLU A 35 SER A 36 GLY A 37 SITE 2 AC6 6 GLY A 75 HOH A 327 SITE 1 AC7 4 LEU A 172 VAL A 173 HIS A 174 PRO A 175 SITE 1 AC8 2 MSE A 254 GLU A 255 SITE 1 AC9 4 PRO A 214 GLN A 215 PRO A 217 HOH A 336 SITE 1 BC1 14 HOH A 18 ASP A 46 TRP A 85 GLY A 103 SITE 2 BC1 14 ILE A 104 SER A 105 ARG A 110 THR A 157 SITE 3 BC1 14 ASN A 177 ASP A 195 GLU A 198 LYS A 223 SITE 4 BC1 14 HOH A 279 HOH A 297 CRYST1 126.390 126.390 88.981 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007912 0.004568 0.000000 0.00000 SCALE2 0.000000 0.009136 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011238 0.00000