HEADER CYTOKINE 20-OCT-09 3KBX TITLE HUMAN MACROPHAGE INFLAMMATORY PROTEIN-1 ALPHA L3M_V63M COMPND MOL_ID: 1; COMPND 2 MOLECULE: CCL3; COMPND 3 CHAIN: A, B, C, D, E; COMPND 4 SYNONYM: SMALL-INDUCIBLE CYTOKINE A3, MACROPHAGE INFLAMMATORY PROTEIN COMPND 5 1-ALPHA, MIP-1-ALPHA, TONSILLAR LYMPHOCYTE LD78 ALPHA PROTEIN, G0/G1 COMPND 6 SWITCH REGULATORY PROTEIN 19-1, G0S19-1 PROTEIN, SIS-BETA, PAT 464.1, COMPND 7 MIP-1-ALPHA(4-69), LD78-ALPHA(4-69); COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CCL3, G0S19-1, MIP1A, SCYA3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS CHEMOKINE, CHEMOTAXIS, INFLAMMATORY RESPONSE, SECRETED, CYTOKINE EXPDTA X-RAY DIFFRACTION AUTHOR Q.GUO,M.REN,W.-J.TANG REVDAT 4 27-NOV-24 3KBX 1 REMARK REVDAT 3 13-OCT-21 3KBX 1 REMARK SEQADV LINK REVDAT 2 16-NOV-11 3KBX 1 VERSN HETATM REVDAT 1 27-OCT-10 3KBX 0 JRNL AUTH Q.GUO,M.REN,W.-J.TANG JRNL TITL STRUCTURAL BASIS FOR THE OLIGOMERIZATION OF MACROPHAGE JRNL TITL 2 INFLAMMATORY PROTEIN-1 ALPHA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.5_2) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.80 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.070 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 3 NUMBER OF REFLECTIONS : 20703 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1056 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.8014 - 5.3013 1.00 2731 135 0.2189 0.2297 REMARK 3 2 5.3013 - 4.2090 1.00 2578 126 0.1642 0.2064 REMARK 3 3 4.2090 - 3.6773 1.00 2526 134 0.1825 0.2391 REMARK 3 4 3.6773 - 3.3412 0.99 2499 133 0.2074 0.2519 REMARK 3 5 3.3412 - 3.1018 0.98 2425 151 0.2386 0.3205 REMARK 3 6 3.1018 - 2.9190 0.96 2391 127 0.2802 0.3219 REMARK 3 7 2.9190 - 2.7728 0.93 2321 127 0.2751 0.3389 REMARK 3 8 2.7728 - 2.6520 0.88 2176 123 0.2837 0.3340 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 39.68 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.600 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 60.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.30100 REMARK 3 B22 (A**2) : 2.30100 REMARK 3 B33 (A**2) : -4.60200 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 2686 REMARK 3 ANGLE : 1.215 3620 REMARK 3 CHIRALITY : 0.089 395 REMARK 3 PLANARITY : 0.005 470 REMARK 3 DIHEDRAL : 19.506 965 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3KBX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-OCT-09. REMARK 100 THE DEPOSITION ID IS D_1000055798. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUL-09 REMARK 200 TEMPERATURE (KELVIN) : 108 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : 2.652 REMARK 200 RESOLUTION RANGE LOW (A) : 42.796 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.54067 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 25.77033 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 51.54067 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 25.77033 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 51.54067 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 25.77033 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 51.54067 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 25.77033 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8320 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 89.00500 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -154.16118 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 K K A 71 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 80 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 75 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 SER A 2 REMARK 465 MSE A 3 REMARK 465 ALA A 70 REMARK 465 ALA B 1 REMARK 465 SER B 2 REMARK 465 MSE B 3 REMARK 465 ALA B 70 REMARK 465 ALA C 1 REMARK 465 SER C 2 REMARK 465 MSE C 3 REMARK 465 ALA C 70 REMARK 465 ALA D 1 REMARK 465 SER D 2 REMARK 465 MSE D 3 REMARK 465 ALA D 70 REMARK 465 ALA E 1 REMARK 465 SER E 2 REMARK 465 MSE E 3 REMARK 465 ALA E 70 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 C ACT A 72 C ACT A 72 9554 0.75 REMARK 500 CH3 ACT A 72 CH3 ACT A 72 9554 0.87 REMARK 500 C ACT A 72 CH3 ACT A 72 9554 1.32 REMARK 500 C ACT A 72 OXT ACT A 72 9554 1.43 REMARK 500 O ACT A 72 OXT ACT A 72 9554 1.59 REMARK 500 OXT ACT A 72 OXT ACT A 72 9554 1.74 REMARK 500 O ACT A 72 CH3 ACT A 72 9554 1.76 REMARK 500 C ACT A 72 O ACT A 72 9554 1.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 5 142.03 171.76 REMARK 500 ASP A 6 44.63 74.77 REMARK 500 ASP A 27 -179.77 -175.55 REMARK 500 LEU A 68 48.88 -84.00 REMARK 500 ALA B 5 148.68 167.46 REMARK 500 LEU B 68 54.26 -95.53 REMARK 500 ASN D 23 0.66 -68.97 REMARK 500 SER D 47 14.86 80.37 REMARK 500 LEU D 68 50.37 -100.30 REMARK 500 ALA E 5 117.93 -179.47 REMARK 500 ASP E 6 9.47 87.12 REMARK 500 ASP E 27 -177.41 -171.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 71 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 33 O REMARK 620 2 CYS A 35 O 83.9 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 71 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 72 DBREF 3KBX A 1 70 UNP P10147 CCL3_HUMAN 23 92 DBREF 3KBX B 1 70 UNP P10147 CCL3_HUMAN 23 92 DBREF 3KBX C 1 70 UNP P10147 CCL3_HUMAN 23 92 DBREF 3KBX D 1 70 UNP P10147 CCL3_HUMAN 23 92 DBREF 3KBX E 1 70 UNP P10147 CCL3_HUMAN 23 92 SEQADV 3KBX MSE A 3 UNP P10147 LEU 25 ENGINEERED MUTATION SEQADV 3KBX MSE A 63 UNP P10147 VAL 85 ENGINEERED MUTATION SEQADV 3KBX MSE B 3 UNP P10147 LEU 25 ENGINEERED MUTATION SEQADV 3KBX MSE B 63 UNP P10147 VAL 85 ENGINEERED MUTATION SEQADV 3KBX MSE C 3 UNP P10147 LEU 25 ENGINEERED MUTATION SEQADV 3KBX MSE C 63 UNP P10147 VAL 85 ENGINEERED MUTATION SEQADV 3KBX MSE D 3 UNP P10147 LEU 25 ENGINEERED MUTATION SEQADV 3KBX MSE D 63 UNP P10147 VAL 85 ENGINEERED MUTATION SEQADV 3KBX MSE E 3 UNP P10147 LEU 25 ENGINEERED MUTATION SEQADV 3KBX MSE E 63 UNP P10147 VAL 85 ENGINEERED MUTATION SEQRES 1 A 70 ALA SER MSE ALA ALA ASP THR PRO THR ALA CYS CYS PHE SEQRES 2 A 70 SER TYR THR SER ARG GLN ILE PRO GLN ASN PHE ILE ALA SEQRES 3 A 70 ASP TYR PHE GLU THR SER SER GLN CYS SER LYS PRO GLY SEQRES 4 A 70 VAL ILE PHE LEU THR LYS ARG SER ARG GLN VAL CYS ALA SEQRES 5 A 70 ASP PRO SER GLU GLU TRP VAL GLN LYS TYR MSE SER ASP SEQRES 6 A 70 LEU GLU LEU SER ALA SEQRES 1 B 70 ALA SER MSE ALA ALA ASP THR PRO THR ALA CYS CYS PHE SEQRES 2 B 70 SER TYR THR SER ARG GLN ILE PRO GLN ASN PHE ILE ALA SEQRES 3 B 70 ASP TYR PHE GLU THR SER SER GLN CYS SER LYS PRO GLY SEQRES 4 B 70 VAL ILE PHE LEU THR LYS ARG SER ARG GLN VAL CYS ALA SEQRES 5 B 70 ASP PRO SER GLU GLU TRP VAL GLN LYS TYR MSE SER ASP SEQRES 6 B 70 LEU GLU LEU SER ALA SEQRES 1 C 70 ALA SER MSE ALA ALA ASP THR PRO THR ALA CYS CYS PHE SEQRES 2 C 70 SER TYR THR SER ARG GLN ILE PRO GLN ASN PHE ILE ALA SEQRES 3 C 70 ASP TYR PHE GLU THR SER SER GLN CYS SER LYS PRO GLY SEQRES 4 C 70 VAL ILE PHE LEU THR LYS ARG SER ARG GLN VAL CYS ALA SEQRES 5 C 70 ASP PRO SER GLU GLU TRP VAL GLN LYS TYR MSE SER ASP SEQRES 6 C 70 LEU GLU LEU SER ALA SEQRES 1 D 70 ALA SER MSE ALA ALA ASP THR PRO THR ALA CYS CYS PHE SEQRES 2 D 70 SER TYR THR SER ARG GLN ILE PRO GLN ASN PHE ILE ALA SEQRES 3 D 70 ASP TYR PHE GLU THR SER SER GLN CYS SER LYS PRO GLY SEQRES 4 D 70 VAL ILE PHE LEU THR LYS ARG SER ARG GLN VAL CYS ALA SEQRES 5 D 70 ASP PRO SER GLU GLU TRP VAL GLN LYS TYR MSE SER ASP SEQRES 6 D 70 LEU GLU LEU SER ALA SEQRES 1 E 70 ALA SER MSE ALA ALA ASP THR PRO THR ALA CYS CYS PHE SEQRES 2 E 70 SER TYR THR SER ARG GLN ILE PRO GLN ASN PHE ILE ALA SEQRES 3 E 70 ASP TYR PHE GLU THR SER SER GLN CYS SER LYS PRO GLY SEQRES 4 E 70 VAL ILE PHE LEU THR LYS ARG SER ARG GLN VAL CYS ALA SEQRES 5 E 70 ASP PRO SER GLU GLU TRP VAL GLN LYS TYR MSE SER ASP SEQRES 6 E 70 LEU GLU LEU SER ALA MODRES 3KBX MSE A 63 MET SELENOMETHIONINE MODRES 3KBX MSE B 63 MET SELENOMETHIONINE MODRES 3KBX MSE C 63 MET SELENOMETHIONINE MODRES 3KBX MSE D 63 MET SELENOMETHIONINE MODRES 3KBX MSE E 63 MET SELENOMETHIONINE HET MSE A 63 8 HET MSE B 63 8 HET MSE C 63 8 HET MSE D 63 8 HET MSE E 63 8 HET K A 71 1 HET ACT A 72 4 HETNAM MSE SELENOMETHIONINE HETNAM K POTASSIUM ION HETNAM ACT ACETATE ION FORMUL 1 MSE 5(C5 H11 N O2 SE) FORMUL 6 K K 1+ FORMUL 7 ACT C2 H3 O2 1- FORMUL 8 HOH *40(H2 O) HELIX 1 1 PRO A 21 ASN A 23 5 3 HELIX 2 2 GLU A 56 LEU A 68 1 13 HELIX 3 3 PRO B 21 ASN B 23 5 3 HELIX 4 4 GLU B 56 LEU B 68 1 13 HELIX 5 5 PRO C 21 ASN C 23 5 3 HELIX 6 6 GLU C 56 SER C 69 1 14 HELIX 7 7 PRO D 21 ASN D 23 5 3 HELIX 8 8 GLU D 56 LEU D 68 1 13 HELIX 9 9 PRO E 21 ASN E 23 5 3 HELIX 10 10 GLU E 56 LEU E 68 1 13 SHEET 1 A 3 ILE A 25 GLU A 30 0 SHEET 2 A 3 VAL A 40 THR A 44 -1 O LEU A 43 N ALA A 26 SHEET 3 A 3 GLN A 49 ALA A 52 -1 O VAL A 50 N PHE A 42 SHEET 1 B 2 THR B 9 CYS B 11 0 SHEET 2 B 2 THR C 9 CYS C 11 -1 O CYS C 11 N THR B 9 SHEET 1 C 3 ILE B 25 GLU B 30 0 SHEET 2 C 3 VAL B 40 THR B 44 -1 O LEU B 43 N ALA B 26 SHEET 3 C 3 GLN B 49 ALA B 52 -1 O ALA B 52 N VAL B 40 SHEET 1 D 3 ILE C 25 GLU C 30 0 SHEET 2 D 3 VAL C 40 THR C 44 -1 O LEU C 43 N ALA C 26 SHEET 3 D 3 GLN C 49 ALA C 52 -1 O ALA C 52 N VAL C 40 SHEET 1 E 2 THR D 9 CYS D 11 0 SHEET 2 E 2 THR E 9 CYS E 11 -1 O THR E 9 N CYS D 11 SHEET 1 F 3 ILE D 25 GLU D 30 0 SHEET 2 F 3 VAL D 40 THR D 44 -1 O LEU D 43 N ALA D 26 SHEET 3 F 3 GLN D 49 ALA D 52 -1 O ALA D 52 N VAL D 40 SHEET 1 G 3 ILE E 25 GLU E 30 0 SHEET 2 G 3 VAL E 40 THR E 44 -1 O LEU E 43 N ALA E 26 SHEET 3 G 3 GLN E 49 ALA E 52 -1 O ALA E 52 N VAL E 40 SSBOND 1 CYS A 11 CYS A 35 1555 1555 2.08 SSBOND 2 CYS A 12 CYS A 51 1555 1555 2.10 SSBOND 3 CYS B 11 CYS B 35 1555 1555 2.08 SSBOND 4 CYS B 12 CYS B 51 1555 1555 2.10 SSBOND 5 CYS C 11 CYS C 35 1555 1555 2.08 SSBOND 6 CYS C 12 CYS C 51 1555 1555 2.10 SSBOND 7 CYS D 11 CYS D 35 1555 1555 2.08 SSBOND 8 CYS D 12 CYS D 51 1555 1555 2.08 SSBOND 9 CYS E 11 CYS E 35 1555 1555 2.07 SSBOND 10 CYS E 12 CYS E 51 1555 1555 2.10 LINK C TYR A 62 N MSE A 63 1555 1555 1.32 LINK C MSE A 63 N SER A 64 1555 1555 1.33 LINK C TYR B 62 N MSE B 63 1555 1555 1.32 LINK C MSE B 63 N SER B 64 1555 1555 1.33 LINK C TYR C 62 N MSE C 63 1555 1555 1.33 LINK C MSE C 63 N SER C 64 1555 1555 1.33 LINK C TYR D 62 N MSE D 63 1555 1555 1.33 LINK C MSE D 63 N SER D 64 1555 1555 1.32 LINK C TYR E 62 N MSE E 63 1555 1555 1.33 LINK C MSE E 63 N SER E 64 1555 1555 1.33 LINK O SER A 33 K K A 71 1555 1555 2.93 LINK O CYS A 35 K K A 71 1555 1555 3.09 SITE 1 AC1 2 SER A 33 CYS A 35 SITE 1 AC2 1 LYS A 37 CRYST1 178.010 178.010 77.311 90.00 90.00 120.00 P 62 2 2 60 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005618 0.003243 0.000000 0.00000 SCALE2 0.000000 0.006487 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012935 0.00000 CONECT 50 248 CONECT 56 374 CONECT 231 2616 CONECT 246 2616 CONECT 248 50 CONECT 374 56 CONECT 460 470 CONECT 470 460 471 CONECT 471 470 472 474 CONECT 472 471 473 478 CONECT 473 472 CONECT 474 471 475 CONECT 475 474 476 CONECT 476 475 477 CONECT 477 476 CONECT 478 472 CONECT 573 771 CONECT 579 897 CONECT 771 573 CONECT 897 579 CONECT 983 993 CONECT 993 983 994 CONECT 994 993 995 997 CONECT 995 994 996 1001 CONECT 996 995 CONECT 997 994 998 CONECT 998 997 999 CONECT 999 998 1000 CONECT 1000 999 CONECT 1001 995 CONECT 1096 1294 CONECT 1102 1420 CONECT 1294 1096 CONECT 1420 1102 CONECT 1506 1516 CONECT 1516 1506 1517 CONECT 1517 1516 1518 1520 CONECT 1518 1517 1519 1524 CONECT 1519 1518 CONECT 1520 1517 1521 CONECT 1521 1520 1522 CONECT 1522 1521 1523 CONECT 1523 1522 CONECT 1524 1518 CONECT 1619 1817 CONECT 1625 1943 CONECT 1817 1619 CONECT 1943 1625 CONECT 2029 2039 CONECT 2039 2029 2040 CONECT 2040 2039 2041 2043 CONECT 2041 2040 2042 2047 CONECT 2042 2041 CONECT 2043 2040 2044 CONECT 2044 2043 2045 CONECT 2045 2044 2046 CONECT 2046 2045 CONECT 2047 2041 CONECT 2142 2340 CONECT 2148 2466 CONECT 2340 2142 CONECT 2466 2148 CONECT 2552 2562 CONECT 2562 2552 2563 CONECT 2563 2562 2564 2566 CONECT 2564 2563 2565 2570 CONECT 2565 2564 CONECT 2566 2563 2567 CONECT 2567 2566 2568 CONECT 2568 2567 2569 CONECT 2569 2568 CONECT 2570 2564 CONECT 2616 231 246 CONECT 2617 2618 2619 2620 CONECT 2618 2617 CONECT 2619 2617 CONECT 2620 2617 MASTER 366 0 7 10 19 0 2 6 2655 5 77 30 END