HEADER TRANSFERASE/DNA 22-OCT-09 3KD5 TITLE CLOSED TERNARY COMPLEX OF AN RB69 GP43 FINGERS DOMAIN MUTANT COMPLEXED TITLE 2 WITH AN ACYCLIC GMP TERMINATED PRIMER TEMPLATE PAIR AND TITLE 3 PHOSPHONOFORMIC ACID. COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'- COMPND 3 D(*CP*GP*TP*CP*TP*TP*AP*TP*GP*AP*CP*AP*GP*CP*CP*GP*CP*G)-3'); COMPND 4 CHAIN: T; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: DNA (5'-D(*GP*CP*GP*GP*CP*TP*GP*TP*CP*AP*TP*AP*AP*(4DG))- COMPND 8 3'); COMPND 9 CHAIN: P; COMPND 10 FRAGMENT: ACYCLIC GMP TERMINATED PRIMER DNA; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: DNA POLYMERASE; COMPND 14 CHAIN: E; COMPND 15 FRAGMENT: RB69 GP43 EXO- CHIMERA CONTAINING ELEMENTS FROM THE FINGERS COMPND 16 DOMAIN OF THE HUMAN CYTOMEGALOVIRUS DNA POLYMERASE.; COMPND 17 SYNONYM: GP43; COMPND 18 EC: 2.7.7.7; COMPND 19 ENGINEERED: YES; COMPND 20 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: OLIGONUCLEOTIDE WAS CHEMICALLY SYNTHESIZED.; SOURCE 4 MOL_ID: 2; SOURCE 5 SYNTHETIC: YES; SOURCE 6 OTHER_DETAILS: OLIGONUCLEOTIDE WAS CHEMICALLY SYNTHESIZED.; SOURCE 7 MOL_ID: 3; SOURCE 8 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE RB69; SOURCE 9 ORGANISM_COMMON: BACTERIOPHAGE RB69; SOURCE 10 ORGANISM_TAXID: 12353; SOURCE 11 GENE: 43, RB69 GP43; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 14 EXPRESSION_SYSTEM_STRAIN: BL21 DE3; SOURCE 15 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 16 EXPRESSION_SYSTEM_PLASMID: PPR-IBA1 KEYWDS POLYMERASE, GP43, HUMAN CYTOMEGALOVIRUS, HCMV, ACYCLIC GUANOSINE, KEYWDS 2 ACYCLOVIR, PHOSPHONOFORMIC ACID, FOSCARNET, FOSCAVIR, ANTIVIRAL, DNA KEYWDS 3 REPLICATION, DNA-BINDING, DNA-DIRECTED DNA POLYMERASE, EXONUCLEASE, KEYWDS 4 HYDROLASE, NUCLEASE, NUCLEOTIDYLTRANSFERASE, TRANSFERASE, KEYWDS 5 TRANSFERASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR K.E.ZAHN,S.DOUBLIE REVDAT 5 06-SEP-23 3KD5 1 REMARK REVDAT 4 13-OCT-21 3KD5 1 REMARK SEQADV HETSYN LINK REVDAT 3 17-JUL-19 3KD5 1 REMARK LINK REVDAT 2 15-APR-15 3KD5 1 JRNL VERSN REVDAT 1 13-APR-11 3KD5 0 JRNL AUTH K.E.ZAHN,E.P.TCHESNOKOV,M.GOTTE,S.DOUBLIE JRNL TITL PHOSPHONOFORMIC ACID INHIBITS VIRAL REPLICATION BY TRAPPING JRNL TITL 2 THE CLOSED FORM OF THE DNA POLYMERASE. JRNL REF J.BIOL.CHEM. V. 286 25246 2011 JRNL REFN ISSN 0021-9258 JRNL PMID 21566148 JRNL DOI 10.1074/JBC.M111.248864 REMARK 2 REMARK 2 RESOLUTION. 2.69 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0041 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.69 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 32507 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : TEST SET EXTRACTED FROM 1IG9 REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.600 REMARK 3 FREE R VALUE TEST SET COUNT : 3470 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.69 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.76 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2097 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.52 REMARK 3 BIN R VALUE (WORKING SET) : 0.3470 REMARK 3 BIN FREE R VALUE SET COUNT : 235 REMARK 3 BIN FREE R VALUE : 0.3800 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7379 REMARK 3 NUCLEIC ACID ATOMS : 648 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 246 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 86.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -5.64000 REMARK 3 B22 (A**2) : 0.50000 REMARK 3 B33 (A**2) : 5.14000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.370 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.320 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 25.020 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.918 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8292 ; 0.006 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 11342 ; 0.958 ; 1.900 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 904 ; 4.732 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 373 ;34.671 ;24.182 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1346 ;16.703 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 45 ;14.732 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1170 ; 0.067 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6125 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 47665 ; 0.023 ; 0.200 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 1 E 108 REMARK 3 ORIGIN FOR THE GROUP (A): 28.1050 62.6280 35.5680 REMARK 3 T TENSOR REMARK 3 T11: 0.1992 T22: 0.2718 REMARK 3 T33: 0.9101 T12: -0.0449 REMARK 3 T13: -0.1868 T23: -0.0135 REMARK 3 L TENSOR REMARK 3 L11: 1.5858 L22: 9.1178 REMARK 3 L33: 2.6547 L12: -0.2008 REMARK 3 L13: -0.2989 L23: -2.8129 REMARK 3 S TENSOR REMARK 3 S11: 0.1878 S12: -0.2390 S13: 0.2907 REMARK 3 S21: 0.2886 S22: -0.1110 S23: -1.4607 REMARK 3 S31: -0.0626 S32: 0.2946 S33: -0.0768 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 340 E 382 REMARK 3 ORIGIN FOR THE GROUP (A): 19.1580 55.5630 29.4980 REMARK 3 T TENSOR REMARK 3 T11: 0.1817 T22: 0.2212 REMARK 3 T33: 0.9135 T12: 0.0807 REMARK 3 T13: -0.1198 T23: 0.0110 REMARK 3 L TENSOR REMARK 3 L11: 3.5293 L22: 4.3271 REMARK 3 L33: 2.9673 L12: 3.3954 REMARK 3 L13: -1.5139 L23: -1.2681 REMARK 3 S TENSOR REMARK 3 S11: 0.0200 S12: 0.0259 S13: -0.3613 REMARK 3 S21: -0.0222 S22: -0.0029 S23: -1.2350 REMARK 3 S31: 0.0132 S32: 0.1171 S33: -0.0171 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 109 E 339 REMARK 3 ORIGIN FOR THE GROUP (A): 8.8250 37.0640 51.8710 REMARK 3 T TENSOR REMARK 3 T11: 0.7721 T22: 0.3417 REMARK 3 T33: 0.3556 T12: -0.0049 REMARK 3 T13: -0.4381 T23: -0.0265 REMARK 3 L TENSOR REMARK 3 L11: 2.6973 L22: 3.1633 REMARK 3 L33: 1.9845 L12: 0.6562 REMARK 3 L13: 0.3790 L23: -0.1448 REMARK 3 S TENSOR REMARK 3 S11: 0.1410 S12: -0.3264 S13: 0.0240 REMARK 3 S21: 0.9255 S22: -0.0982 S23: -0.4638 REMARK 3 S31: 0.2417 S32: -0.1871 S33: -0.0428 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 383 E 468 REMARK 3 ORIGIN FOR THE GROUP (A): 1.4740 61.4290 9.6320 REMARK 3 T TENSOR REMARK 3 T11: 0.3321 T22: 0.4798 REMARK 3 T33: 0.4988 T12: 0.0848 REMARK 3 T13: 0.1685 T23: 0.3310 REMARK 3 L TENSOR REMARK 3 L11: 3.3649 L22: 3.2354 REMARK 3 L33: 1.7390 L12: 1.2906 REMARK 3 L13: -0.6037 L23: 0.1958 REMARK 3 S TENSOR REMARK 3 S11: -0.0564 S12: 0.8380 S13: 0.8149 REMARK 3 S21: -0.5007 S22: 0.2369 S23: -0.4721 REMARK 3 S31: -0.3760 S32: -0.2933 S33: -0.1805 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 573 E 729 REMARK 3 ORIGIN FOR THE GROUP (A): -4.6040 45.1730 5.5490 REMARK 3 T TENSOR REMARK 3 T11: 0.2986 T22: 0.6814 REMARK 3 T33: 0.1769 T12: 0.0648 REMARK 3 T13: 0.1060 T23: 0.1198 REMARK 3 L TENSOR REMARK 3 L11: 2.2704 L22: 2.2324 REMARK 3 L33: 1.4025 L12: 0.3105 REMARK 3 L13: -0.0237 L23: 0.7709 REMARK 3 S TENSOR REMARK 3 S11: -0.0285 S12: 0.9601 S13: 0.0547 REMARK 3 S21: -0.4342 S22: 0.0651 S23: -0.3221 REMARK 3 S31: -0.0222 S32: -0.2775 S33: -0.0366 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 469 E 572 REMARK 3 ORIGIN FOR THE GROUP (A): 9.4180 31.3550 18.7480 REMARK 3 T TENSOR REMARK 3 T11: 0.3225 T22: 0.3232 REMARK 3 T33: 0.5135 T12: 0.1115 REMARK 3 T13: 0.0039 T23: 0.0863 REMARK 3 L TENSOR REMARK 3 L11: 2.4606 L22: 9.4214 REMARK 3 L33: 1.1425 L12: -1.1485 REMARK 3 L13: -0.0743 L23: 2.4227 REMARK 3 S TENSOR REMARK 3 S11: -0.1311 S12: 0.2342 S13: -0.5041 REMARK 3 S21: 0.6789 S22: 0.1735 S23: -0.6030 REMARK 3 S31: 0.3213 S32: 0.2639 S33: -0.0424 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 730 E 905 REMARK 3 ORIGIN FOR THE GROUP (A): -22.9110 38.4500 35.9580 REMARK 3 T TENSOR REMARK 3 T11: 0.5418 T22: 0.4838 REMARK 3 T33: 0.0293 T12: -0.0719 REMARK 3 T13: 0.0426 T23: 0.0640 REMARK 3 L TENSOR REMARK 3 L11: 4.5337 L22: 3.5664 REMARK 3 L33: 2.4586 L12: 1.3810 REMARK 3 L13: 0.5875 L23: 0.8275 REMARK 3 S TENSOR REMARK 3 S11: 0.2577 S12: -0.3178 S13: -0.2084 REMARK 3 S21: 0.9773 S22: -0.2592 S23: 0.0870 REMARK 3 S31: 0.2979 S32: -0.6349 S33: 0.0015 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3KD5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-NOV-09. REMARK 100 THE DEPOSITION ID IS D_1000055842. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-AUG-09 REMARK 200 TEMPERATURE (KELVIN) : 200.0 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 4 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03315 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL CRYO-COOLED REMARK 200 SI(111) REMARK 200 OPTICS : SI(111) DOUBLE CRYSTAL REMARK 200 MONOCHROMETER. ADJUSTABLE REMARK 200 FOCUSING MIRRORS IN K-B GEOMET RY REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 300 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36065 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 23.40 REMARK 200 R MERGE (I) : 0.11300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 26.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 21.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: ISOMORPHOUS REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 3KD1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5% PEG 20000, 0.1M SODIUM ACETATE PH5, REMARK 280 0.1M MAGNESIUM ACETATE, 0.1M TRIS HCL PH 7.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 38.92750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.68550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 61.24050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 66.68550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.92750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 61.24050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 44460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -57.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: T, P, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TRP E 906 REMARK 465 SER E 907 REMARK 465 HIS E 908 REMARK 465 PRO E 909 REMARK 465 GLN E 910 REMARK 465 PHE E 911 REMARK 465 GLU E 912 REMARK 465 LYS E 913 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR E 416 O HOH E 1099 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC T 1 C3' - O3' - P ANGL. DEV. = 7.5 DEGREES REMARK 500 DC P 102 C3' - O3' - P ANGL. DEV. = 7.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP E 13 40.40 -102.89 REMARK 500 THR E 47 -156.23 -125.42 REMARK 500 ALA E 129 50.96 39.67 REMARK 500 PRO E 155 1.61 -64.26 REMARK 500 PHE E 221 -58.37 -128.95 REMARK 500 ASN E 255 -158.21 -98.07 REMARK 500 TYR E 257 -84.55 -107.24 REMARK 500 PRO E 458 10.14 -62.31 REMARK 500 VAL E 510 90.13 -69.74 REMARK 500 ASP E 579 109.76 -170.70 REMARK 500 THR E 622 -60.33 69.22 REMARK 500 ASP E 623 28.10 -152.17 REMARK 500 SER E 639 0.61 -59.83 REMARK 500 ARG E 658 -50.12 -120.44 REMARK 500 GLU E 686 -91.87 -105.33 REMARK 500 ALA E 785 71.17 -109.35 REMARK 500 ILE E 819 -72.12 -25.99 REMARK 500 ASP E 843 -129.86 -90.59 REMARK 500 ILE E 858 -8.61 -152.48 REMARK 500 PHE E 876 -61.30 -108.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG E 915 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DA P 113 O3' REMARK 620 2 4DG P 114 OP1 71.4 REMARK 620 3 HOH P 206 O 85.6 78.7 REMARK 620 4 ASP E 411 OD1 155.5 112.0 71.9 REMARK 620 5 ASP E 411 OD2 144.0 72.6 88.3 47.3 REMARK 620 6 ASP E 623 OD1 95.8 100.3 177.9 107.0 89.6 REMARK 620 7 HOH E1077 O 82.8 146.9 79.0 83.5 130.6 102.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG E 916 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 4DG P 114 OP1 REMARK 620 2 ASP E 411 OD2 86.4 REMARK 620 3 LEU E 412 O 177.8 92.3 REMARK 620 4 ASP E 623 OD2 89.6 97.1 92.3 REMARK 620 5 PPF E 914 O1 92.8 86.3 85.4 176.0 REMARK 620 6 PPF E 914 O5 86.9 167.8 94.0 93.1 83.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG E 917 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP E 114 OD2 REMARK 620 2 GLU E 116 OE2 121.7 REMARK 620 3 HOH E1065 O 136.1 65.9 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PPF E 914 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG E 915 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG E 916 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG E 917 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3KD1 RELATED DB: PDB REMARK 900 SIMILAR COMPLEX WITHOUT PHOSPHONOFORMIC ACID DBREF 3KD5 E 1 903 UNP Q38087 DPOL_BPR69 1 903 DBREF 3KD5 T 1 18 PDB 3KD5 3KD5 1 18 DBREF 3KD5 P 101 114 PDB 3KD5 3KD5 101 114 SEQADV 3KD5 ALA E 222 UNP Q38087 ASP 222 ENGINEERED MUTATION SEQADV 3KD5 TRP E 478 UNP Q38087 VAL 478 ENGINEERED MUTATION SEQADV 3KD5 VAL E 479 UNP Q38087 PHE 479 ENGINEERED MUTATION SEQADV 3KD5 SER E 480 UNP Q38087 ASN 480 ENGINEERED MUTATION SEQADV 3KD5 MET E 557 UNP Q38087 ILE 557 ENGINEERED MUTATION SEQADV 3KD5 ALA E 558 UNP Q38087 ASN 558 ENGINEERED MUTATION SEQADV 3KD5 LEU E 559 UNP Q38087 ARG 559 ENGINEERED MUTATION SEQADV 3KD5 VAL E 561 UNP Q38087 LEU 561 ENGINEERED MUTATION SEQADV 3KD5 THR E 562 UNP Q38087 LEU 562 ENGINEERED MUTATION SEQADV 3KD5 CYS E 563 UNP Q38087 ILE 563 ENGINEERED MUTATION SEQADV 3KD5 SER E 904 UNP Q38087 EXPRESSION TAG SEQADV 3KD5 ALA E 905 UNP Q38087 EXPRESSION TAG SEQADV 3KD5 TRP E 906 UNP Q38087 EXPRESSION TAG SEQADV 3KD5 SER E 907 UNP Q38087 EXPRESSION TAG SEQADV 3KD5 HIS E 908 UNP Q38087 EXPRESSION TAG SEQADV 3KD5 PRO E 909 UNP Q38087 EXPRESSION TAG SEQADV 3KD5 GLN E 910 UNP Q38087 EXPRESSION TAG SEQADV 3KD5 PHE E 911 UNP Q38087 EXPRESSION TAG SEQADV 3KD5 GLU E 912 UNP Q38087 EXPRESSION TAG SEQADV 3KD5 LYS E 913 UNP Q38087 EXPRESSION TAG SEQRES 1 T 18 DC DG DT DC DT DT DA DT DG DA DC DA DG SEQRES 2 T 18 DC DC DG DC DG SEQRES 1 P 14 DG DC DG DG DC DT DG DT DC DA DT DA DA SEQRES 2 P 14 4DG SEQRES 1 E 913 MET LYS GLU PHE TYR LEU THR VAL GLU GLN ILE GLY ASP SEQRES 2 E 913 SER ILE PHE GLU ARG TYR ILE ASP SER ASN GLY ARG GLU SEQRES 3 E 913 ARG THR ARG GLU VAL GLU TYR LYS PRO SER LEU PHE ALA SEQRES 4 E 913 HIS CYS PRO GLU SER GLN ALA THR LYS TYR PHE ASP ILE SEQRES 5 E 913 TYR GLY LYS PRO CYS THR ARG LYS LEU PHE ALA ASN MET SEQRES 6 E 913 ARG ASP ALA SER GLN TRP ILE LYS ARG MET GLU ASP ILE SEQRES 7 E 913 GLY LEU GLU ALA LEU GLY MET ASP ASP PHE LYS LEU ALA SEQRES 8 E 913 TYR LEU SER ASP THR TYR ASN TYR GLU ILE LYS TYR ASP SEQRES 9 E 913 HIS THR LYS ILE ARG VAL ALA ASN PHE ASP ILE GLU VAL SEQRES 10 E 913 THR SER PRO ASP GLY PHE PRO GLU PRO SER GLN ALA LYS SEQRES 11 E 913 HIS PRO ILE ASP ALA ILE THR HIS TYR ASP SER ILE ASP SEQRES 12 E 913 ASP ARG PHE TYR VAL PHE ASP LEU LEU ASN SER PRO TYR SEQRES 13 E 913 GLY ASN VAL GLU GLU TRP SER ILE GLU ILE ALA ALA LYS SEQRES 14 E 913 LEU GLN GLU GLN GLY GLY ASP GLU VAL PRO SER GLU ILE SEQRES 15 E 913 ILE ASP LYS ILE ILE TYR MET PRO PHE ASP ASN GLU LYS SEQRES 16 E 913 GLU LEU LEU MET GLU TYR LEU ASN PHE TRP GLN GLN LYS SEQRES 17 E 913 THR PRO VAL ILE LEU THR GLY TRP ASN VAL GLU SER PHE SEQRES 18 E 913 ALA ILE PRO TYR VAL TYR ASN ARG ILE LYS ASN ILE PHE SEQRES 19 E 913 GLY GLU SER THR ALA LYS ARG LEU SER PRO HIS ARG LYS SEQRES 20 E 913 THR ARG VAL LYS VAL ILE GLU ASN MET TYR GLY SER ARG SEQRES 21 E 913 GLU ILE ILE THR LEU PHE GLY ILE SER VAL LEU ASP TYR SEQRES 22 E 913 ILE ASP LEU TYR LYS LYS PHE SER PHE THR ASN GLN PRO SEQRES 23 E 913 SER TYR SER LEU ASP TYR ILE SER GLU PHE GLU LEU ASN SEQRES 24 E 913 VAL GLY LYS LEU LYS TYR ASP GLY PRO ILE SER LYS LEU SEQRES 25 E 913 ARG GLU SER ASN HIS GLN ARG TYR ILE SER TYR ASN ILE SEQRES 26 E 913 ILE ASP VAL TYR ARG VAL LEU GLN ILE ASP ALA LYS ARG SEQRES 27 E 913 GLN PHE ILE ASN LEU SER LEU ASP MET GLY TYR TYR ALA SEQRES 28 E 913 LYS ILE GLN ILE GLN SER VAL PHE SER PRO ILE LYS THR SEQRES 29 E 913 TRP ASP ALA ILE ILE PHE ASN SER LEU LYS GLU GLN ASN SEQRES 30 E 913 LYS VAL ILE PRO GLN GLY ARG SER HIS PRO VAL GLN PRO SEQRES 31 E 913 TYR PRO GLY ALA PHE VAL LYS GLU PRO ILE PRO ASN ARG SEQRES 32 E 913 TYR LYS TYR VAL MET SER PHE ASP LEU THR SER LEU TYR SEQRES 33 E 913 PRO SER ILE ILE ARG GLN VAL ASN ILE SER PRO GLU THR SEQRES 34 E 913 ILE ALA GLY THR PHE LYS VAL ALA PRO LEU HIS ASP TYR SEQRES 35 E 913 ILE ASN ALA VAL ALA GLU ARG PRO SER ASP VAL TYR SER SEQRES 36 E 913 CYS SER PRO ASN GLY MET MET TYR TYR LYS ASP ARG ASP SEQRES 37 E 913 GLY VAL VAL PRO THR GLU ILE THR LYS TRP VAL SER GLN SEQRES 38 E 913 ARG LYS GLU HIS LYS GLY TYR MET LEU ALA ALA GLN ARG SEQRES 39 E 913 ASN GLY GLU ILE ILE LYS GLU ALA LEU HIS ASN PRO ASN SEQRES 40 E 913 LEU SER VAL ASP GLU PRO LEU ASP VAL ASP TYR ARG PHE SEQRES 41 E 913 ASP PHE SER ASP GLU ILE LYS GLU LYS ILE LYS LYS LEU SEQRES 42 E 913 SER ALA LYS SER LEU ASN GLU MET LEU PHE ARG ALA GLN SEQRES 43 E 913 ARG THR GLU VAL ALA GLY MET THR ALA GLN MET ALA LEU SEQRES 44 E 913 LYS VAL THR CYS ASN SER LEU TYR GLY ALA LEU GLY ASN SEQRES 45 E 913 VAL TRP PHE ARG TYR TYR ASP LEU ARG ASN ALA THR ALA SEQRES 46 E 913 ILE THR THR PHE GLY GLN MET ALA LEU GLN TRP ILE GLU SEQRES 47 E 913 ARG LYS VAL ASN GLU TYR LEU ASN GLU VAL CYS GLY THR SEQRES 48 E 913 GLU GLY GLU ALA PHE VAL LEU TYR GLY ASP THR ASP SER SEQRES 49 E 913 ILE TYR VAL SER ALA ASP LYS ILE ILE ASP LYS VAL GLY SEQRES 50 E 913 GLU SER LYS PHE ARG ASP THR ASN HIS TRP VAL ASP PHE SEQRES 51 E 913 LEU ASP LYS PHE ALA ARG GLU ARG MET GLU PRO ALA ILE SEQRES 52 E 913 ASP ARG GLY PHE ARG GLU MET CYS GLU TYR MET ASN ASN SEQRES 53 E 913 LYS GLN HIS LEU MET PHE MET ASP ARG GLU ALA ILE ALA SEQRES 54 E 913 GLY PRO PRO LEU GLY SER LYS GLY ILE GLY GLY PHE TRP SEQRES 55 E 913 THR GLY LYS LYS ARG TYR ALA LEU ASN VAL TRP ASP MET SEQRES 56 E 913 GLU GLY THR ARG TYR ALA GLU PRO LYS LEU LYS ILE MET SEQRES 57 E 913 GLY LEU GLU THR GLN LYS SER SER THR PRO LYS ALA VAL SEQRES 58 E 913 GLN LYS ALA LEU LYS GLU CYS ILE ARG ARG MET LEU GLN SEQRES 59 E 913 GLU GLY GLU GLU SER LEU GLN GLU TYR PHE LYS GLU PHE SEQRES 60 E 913 GLU LYS GLU PHE ARG GLN LEU ASN TYR ILE SER ILE ALA SEQRES 61 E 913 SER VAL SER SER ALA ASN ASN ILE ALA LYS TYR ASP VAL SEQRES 62 E 913 GLY GLY PHE PRO GLY PRO LYS CYS PRO PHE HIS ILE ARG SEQRES 63 E 913 GLY ILE LEU THR TYR ASN ARG ALA ILE LYS GLY ASN ILE SEQRES 64 E 913 ASP ALA PRO GLN VAL VAL GLU GLY GLU LYS VAL TYR VAL SEQRES 65 E 913 LEU PRO LEU ARG GLU GLY ASN PRO PHE GLY ASP LYS CYS SEQRES 66 E 913 ILE ALA TRP PRO SER GLY THR GLU ILE THR ASP LEU ILE SEQRES 67 E 913 LYS ASP ASP VAL LEU HIS TRP MET ASP TYR THR VAL LEU SEQRES 68 E 913 LEU GLU LYS THR PHE ILE LYS PRO LEU GLU GLY PHE THR SEQRES 69 E 913 SER ALA ALA LYS LEU ASP TYR GLU LYS LYS ALA SER LEU SEQRES 70 E 913 PHE ASP MET PHE ASP PHE SER ALA TRP SER HIS PRO GLN SEQRES 71 E 913 PHE GLU LYS HET 4DG P 114 19 HET PPF E 914 7 HET MG E 915 1 HET MG E 916 1 HET MG E 917 1 HETNAM 4DG 2-[(2-AMINO-6-OXO-1,6-DIHYDRO-9H-PURIN-9-YL) HETNAM 2 4DG METHOXY]ETHYL DIHYDROGEN PHOSPHATE HETNAM PPF PHOSPHONOFORMIC ACID HETNAM MG MAGNESIUM ION HETSYN 4DG ACYCLIC GUANOSINE MONOPHOSPHATE; ACYCLOVIR HETSYN 2 4DG MONOPHOSPHATE FORMUL 2 4DG C8 H12 N5 O6 P FORMUL 4 PPF C H3 O5 P FORMUL 5 MG 3(MG 2+) FORMUL 8 HOH *246(H2 O) HELIX 1 1 ASN E 64 ASP E 77 1 14 HELIX 2 2 ASP E 87 TYR E 97 1 11 HELIX 3 3 ASP E 104 ILE E 108 5 5 HELIX 4 4 SER E 163 LYS E 169 1 7 HELIX 5 5 PRO E 179 ILE E 183 5 5 HELIX 6 6 ASN E 193 LYS E 208 1 16 HELIX 7 7 PHE E 221 PHE E 234 1 14 HELIX 8 8 GLY E 235 LYS E 240 1 6 HELIX 9 9 ARG E 241 SER E 243 5 3 HELIX 10 10 TYR E 273 SER E 281 1 9 HELIX 11 11 SER E 289 ASN E 299 1 11 HELIX 12 12 PRO E 308 SER E 310 5 3 HELIX 13 13 LYS E 311 ASN E 316 1 6 HELIX 14 14 ASN E 316 GLN E 339 1 24 HELIX 15 15 GLN E 339 LYS E 352 1 14 HELIX 16 16 GLN E 354 PHE E 359 5 6 HELIX 17 17 SER E 360 GLN E 376 1 17 HELIX 18 18 SER E 414 ASN E 424 1 11 HELIX 19 19 PRO E 438 ASN E 444 1 7 HELIX 20 20 GLY E 469 LEU E 503 1 35 HELIX 21 21 SER E 523 LYS E 532 1 10 HELIX 22 22 SER E 534 LEU E 570 1 37 HELIX 23 23 ASP E 579 GLY E 610 1 32 HELIX 24 24 ALA E 629 GLY E 637 1 9 HELIX 25 25 GLU E 638 PHE E 641 5 4 HELIX 26 26 ASP E 643 ARG E 658 1 16 HELIX 27 27 ARG E 658 ASN E 675 1 18 HELIX 28 28 LEU E 730 LYS E 734 5 5 HELIX 29 29 PRO E 738 GLU E 755 1 18 HELIX 30 30 GLY E 756 PHE E 771 1 16 HELIX 31 31 ARG E 772 LEU E 774 5 3 HELIX 32 32 ASN E 787 TYR E 791 1 5 HELIX 33 33 PRO E 802 ILE E 815 1 14 HELIX 34 34 ILE E 858 MET E 866 1 9 HELIX 35 35 ASP E 867 PHE E 876 1 10 HELIX 36 36 PHE E 876 LYS E 888 1 13 HELIX 37 37 SER E 896 PHE E 901 5 6 SHEET 1 A 3 PHE E 4 ILE E 11 0 SHEET 2 A 3 SER E 14 ILE E 20 -1 O PHE E 16 N GLU E 9 SHEET 3 A 3 GLU E 26 VAL E 31 -1 O VAL E 31 N ILE E 15 SHEET 1 B 2 SER E 36 HIS E 40 0 SHEET 2 B 2 CYS E 57 LEU E 61 -1 O THR E 58 N ALA E 39 SHEET 1 C 2 PHE E 50 ASP E 51 0 SHEET 2 C 2 LYS E 378 VAL E 379 1 O VAL E 379 N PHE E 50 SHEET 1 D 6 ILE E 186 PHE E 191 0 SHEET 2 D 6 ARG E 145 LEU E 151 1 N VAL E 148 O ILE E 187 SHEET 3 D 6 ILE E 133 ASP E 140 -1 N ILE E 136 O PHE E 149 SHEET 4 D 6 VAL E 110 VAL E 117 -1 N ASN E 112 O TYR E 139 SHEET 5 D 6 ILE E 212 GLY E 215 1 O THR E 214 N ALA E 111 SHEET 6 D 6 SER E 269 ASP E 272 1 O LEU E 271 N LEU E 213 SHEET 1 E 2 ASN E 153 SER E 154 0 SHEET 2 E 2 GLY E 157 ASN E 158 -1 O GLY E 157 N SER E 154 SHEET 1 F 2 THR E 248 GLU E 254 0 SHEET 2 F 2 SER E 259 LEU E 265 -1 O ARG E 260 N ILE E 253 SHEET 1 G 7 ASN E 402 ARG E 403 0 SHEET 2 G 7 GLY E 700 GLY E 704 -1 O TRP E 702 N ASN E 402 SHEET 3 G 7 ARG E 707 MET E 715 -1 O ARG E 707 N THR E 703 SHEET 4 G 7 MET E 683 ALA E 689 -1 N ILE E 688 O TRP E 713 SHEET 5 G 7 VAL E 407 LEU E 412 -1 N SER E 409 O GLU E 686 SHEET 6 G 7 SER E 624 SER E 628 -1 O VAL E 627 N MET E 408 SHEET 7 G 7 VAL E 617 TYR E 619 -1 N TYR E 619 O TYR E 626 SHEET 1 H 4 ASN E 402 ARG E 403 0 SHEET 2 H 4 GLY E 700 GLY E 704 -1 O TRP E 702 N ASN E 402 SHEET 3 H 4 ARG E 707 MET E 715 -1 O ARG E 707 N THR E 703 SHEET 4 H 4 THR E 718 MET E 728 -1 O MET E 728 N TYR E 708 SHEET 1 I 3 ILE E 430 THR E 433 0 SHEET 2 I 3 MET E 461 TYR E 464 -1 O MET E 462 N ALA E 431 SHEET 3 I 3 TYR E 454 CYS E 456 -1 N SER E 455 O TYR E 463 SHEET 1 J 3 SER E 781 SER E 784 0 SHEET 2 J 3 LYS E 829 PRO E 834 -1 O VAL E 830 N SER E 783 SHEET 3 J 3 CYS E 845 PRO E 849 -1 O ILE E 846 N LEU E 833 SHEET 1 K 2 ASP E 792 VAL E 793 0 SHEET 2 K 2 PHE E 796 PRO E 797 -1 O PHE E 796 N VAL E 793 LINK O3' DA P 113 P 4DG P 114 1555 1555 1.61 LINK O3' DA P 113 MG MG E 915 1555 1555 2.39 LINK OP1 4DG P 114 MG MG E 915 1555 1555 1.85 LINK OP1 4DG P 114 MG MG E 916 1555 1555 2.25 LINK O HOH P 206 MG MG E 915 1555 1555 2.47 LINK OD2 ASP E 114 MG MG E 917 1555 1555 2.21 LINK OE2 GLU E 116 MG MG E 917 1555 1555 2.68 LINK OD1 ASP E 411 MG MG E 915 1555 1555 2.36 LINK OD2 ASP E 411 MG MG E 915 1555 1555 2.92 LINK OD2 ASP E 411 MG MG E 916 1555 1555 2.06 LINK O LEU E 412 MG MG E 916 1555 1555 2.15 LINK OD1 ASP E 623 MG MG E 915 1555 1555 1.84 LINK OD2 ASP E 623 MG MG E 916 1555 1555 1.97 LINK O1 PPF E 914 MG MG E 916 1555 1555 2.19 LINK O5 PPF E 914 MG MG E 916 1555 1555 2.01 LINK MG MG E 915 O HOH E1077 1555 1555 2.29 LINK MG MG E 917 O HOH E1065 1555 1555 2.79 SITE 1 AC1 13 ASP E 411 LEU E 412 THR E 413 SER E 414 SITE 2 AC1 13 LEU E 415 ARG E 482 LYS E 560 ASP E 623 SITE 3 AC1 13 MG E 916 HOH E 935 HOH E 972 HOH E1020 SITE 4 AC1 13 HOH E1117 SITE 1 AC2 6 ASP E 411 ASP E 623 MG E 916 HOH E1077 SITE 2 AC2 6 DA P 113 HOH P 206 SITE 1 AC3 5 ASP E 411 LEU E 412 ASP E 623 PPF E 914 SITE 2 AC3 5 MG E 915 SITE 1 AC4 5 ASP E 114 GLU E 116 ASN E 324 ASP E 327 SITE 2 AC4 5 HOH E1065 CRYST1 77.855 122.481 133.371 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012844 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008165 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007498 0.00000