data_3KEV # _entry.id 3KEV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3KEV RCSB RCSB055904 WWPDB D_1000055904 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id go.88344 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3KEV _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-10-26 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Burgie, E.S.' 1 'Bingman, C.A.' 2 'Phillips Jr., G.N.' 3 'Center for Eukaryotic Structural Genomics (CESG)' 4 # _citation.id primary _citation.title 'Structural architecture of Galdieria sulphuraria DCN1L.' _citation.journal_abbrev Proteins _citation.journal_volume 79 _citation.page_first 1329 _citation.page_last 1336 _citation.year 2011 _citation.journal_id_ASTM PSFGEY _citation.country US _citation.journal_id_ISSN 0887-3585 _citation.journal_id_CSD 0867 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21387409 _citation.pdbx_database_id_DOI 10.1002/prot.22937 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Burgie, E.S.' 1 primary 'Bingman, C.A.' 2 primary 'Makino, S.' 3 primary 'Wesenberg, G.E.' 4 primary 'Pan, X.' 5 primary 'Fox, B.G.' 6 primary 'Phillips, G.N.' 7 # _cell.length_a 36.743 _cell.length_b 52.422 _cell.length_c 49.113 _cell.angle_alpha 90.000 _cell.angle_beta 111.170 _cell.angle_gamma 90.000 _cell.entry_id 3KEV _cell.pdbx_unique_axis ? _cell.Z_PDB 2 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.entry_id 3KEV _symmetry.Int_Tables_number 4 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Galieria sulfuraria DCUN1 domain-containing protein' 23325.146 1 ? ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 non-polymer syn 'ACETATE ION' 59.044 2 ? ? ? ? 4 water nat water 18.015 176 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SKRADKKAILELFQTYKEPLGNYIGAEGLQRLFEDIQVDPSDVVTLVLAWKLKASST(CSO)EFSEKEFVEGLANLQVDS LEKLKRKLSSLRKEIEDPSKFRAFYQFVFQYSKEPSQRSLPAETA(MSE)ALWDVLLRGRFSLLDSWLEFLKNNTHSISR DTWNLLYDFSQLSEKDLSDYDENGAWPVLIDDFVKWLKHEQPNKHES ; _entity_poly.pdbx_seq_one_letter_code_can ;SKRADKKAILELFQTYKEPLGNYIGAEGLQRLFEDIQVDPSDVVTLVLAWKLKASSTCEFSEKEFVEGLANLQVDSLEKL KRKLSSLRKEIEDPSKFRAFYQFVFQYSKEPSQRSLPAETAMALWDVLLRGRFSLLDSWLEFLKNNTHSISRDTWNLLYD FSQLSEKDLSDYDENGAWPVLIDDFVKWLKHEQPNKHES ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier go.88344 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 LYS n 1 3 ARG n 1 4 ALA n 1 5 ASP n 1 6 LYS n 1 7 LYS n 1 8 ALA n 1 9 ILE n 1 10 LEU n 1 11 GLU n 1 12 LEU n 1 13 PHE n 1 14 GLN n 1 15 THR n 1 16 TYR n 1 17 LYS n 1 18 GLU n 1 19 PRO n 1 20 LEU n 1 21 GLY n 1 22 ASN n 1 23 TYR n 1 24 ILE n 1 25 GLY n 1 26 ALA n 1 27 GLU n 1 28 GLY n 1 29 LEU n 1 30 GLN n 1 31 ARG n 1 32 LEU n 1 33 PHE n 1 34 GLU n 1 35 ASP n 1 36 ILE n 1 37 GLN n 1 38 VAL n 1 39 ASP n 1 40 PRO n 1 41 SER n 1 42 ASP n 1 43 VAL n 1 44 VAL n 1 45 THR n 1 46 LEU n 1 47 VAL n 1 48 LEU n 1 49 ALA n 1 50 TRP n 1 51 LYS n 1 52 LEU n 1 53 LYS n 1 54 ALA n 1 55 SER n 1 56 SER n 1 57 THR n 1 58 CSO n 1 59 GLU n 1 60 PHE n 1 61 SER n 1 62 GLU n 1 63 LYS n 1 64 GLU n 1 65 PHE n 1 66 VAL n 1 67 GLU n 1 68 GLY n 1 69 LEU n 1 70 ALA n 1 71 ASN n 1 72 LEU n 1 73 GLN n 1 74 VAL n 1 75 ASP n 1 76 SER n 1 77 LEU n 1 78 GLU n 1 79 LYS n 1 80 LEU n 1 81 LYS n 1 82 ARG n 1 83 LYS n 1 84 LEU n 1 85 SER n 1 86 SER n 1 87 LEU n 1 88 ARG n 1 89 LYS n 1 90 GLU n 1 91 ILE n 1 92 GLU n 1 93 ASP n 1 94 PRO n 1 95 SER n 1 96 LYS n 1 97 PHE n 1 98 ARG n 1 99 ALA n 1 100 PHE n 1 101 TYR n 1 102 GLN n 1 103 PHE n 1 104 VAL n 1 105 PHE n 1 106 GLN n 1 107 TYR n 1 108 SER n 1 109 LYS n 1 110 GLU n 1 111 PRO n 1 112 SER n 1 113 GLN n 1 114 ARG n 1 115 SER n 1 116 LEU n 1 117 PRO n 1 118 ALA n 1 119 GLU n 1 120 THR n 1 121 ALA n 1 122 MSE n 1 123 ALA n 1 124 LEU n 1 125 TRP n 1 126 ASP n 1 127 VAL n 1 128 LEU n 1 129 LEU n 1 130 ARG n 1 131 GLY n 1 132 ARG n 1 133 PHE n 1 134 SER n 1 135 LEU n 1 136 LEU n 1 137 ASP n 1 138 SER n 1 139 TRP n 1 140 LEU n 1 141 GLU n 1 142 PHE n 1 143 LEU n 1 144 LYS n 1 145 ASN n 1 146 ASN n 1 147 THR n 1 148 HIS n 1 149 SER n 1 150 ILE n 1 151 SER n 1 152 ARG n 1 153 ASP n 1 154 THR n 1 155 TRP n 1 156 ASN n 1 157 LEU n 1 158 LEU n 1 159 TYR n 1 160 ASP n 1 161 PHE n 1 162 SER n 1 163 GLN n 1 164 LEU n 1 165 SER n 1 166 GLU n 1 167 LYS n 1 168 ASP n 1 169 LEU n 1 170 SER n 1 171 ASP n 1 172 TYR n 1 173 ASP n 1 174 GLU n 1 175 ASN n 1 176 GLY n 1 177 ALA n 1 178 TRP n 1 179 PRO n 1 180 VAL n 1 181 LEU n 1 182 ILE n 1 183 ASP n 1 184 ASP n 1 185 PHE n 1 186 VAL n 1 187 LYS n 1 188 TRP n 1 189 LEU n 1 190 LYS n 1 191 HIS n 1 192 GLU n 1 193 GLN n 1 194 PRO n 1 195 ASN n 1 196 LYS n 1 197 HIS n 1 198 GLU n 1 199 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'red algae' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Galdieria sulphuraria' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 130081 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'CELL-FREE SYNTHESIS' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pEU-His-Flexi _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Wheat germ cell free' # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3KEV _struct_ref.pdbx_db_accession 3KEV _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;SKRADKKAILELFQTYKEPLGNYIGAEGLQRLFEDIQVDPSDVVTLVLAWKLKASSTCEFSEKEFVEGLANLQVDSLEKL KRKLSSLRKEIEDPSKFRAFYQFVFQYSKEPSQRSLPAETAMALWDVLLRGRFSLLDSWLEFLKNNTHSISRDTWNLLYD FSQLSEKDLSDYDENGAWPVLIDDFVKWLKHEQPNKHES ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3KEV _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 199 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 3KEV _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 199 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 199 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CSO 'L-peptide linking' n S-HYDROXYCYSTEINE ? 'C3 H7 N O3 S' 137.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3KEV _exptl.method 'X-RAY DIFFRACTION' # loop_ _exptl_crystal.id _exptl_crystal.density_Matthews _exptl_crystal.density_meas _exptl_crystal.density_percent_sol _exptl_crystal.description _exptl_crystal.F_000 _exptl_crystal.preparation 1 1.89 ? 34.95 ? ? ? 2 ? ? ? ? ? ? # loop_ _exptl_crystal_grow.crystal_id _exptl_crystal_grow.method _exptl_crystal_grow.pH _exptl_crystal_grow.temp _exptl_crystal_grow.pdbx_details _exptl_crystal_grow.temp_details _exptl_crystal_grow.pdbx_pH_range 1 'VAPOR DIFFUSION, SITTING DROP' 5.0 293 ;30% PEG 1500, 100 mM sodium acetate pH 5.0, 150 mM MgCl2, 50 mM NaCl, 5 mM HEPES pH 7.0, 0.3 mM TCEP, VAPOR DIFFUSION, SITTING DROP, temperature 293K ; ? ? 2 'VAPOR DIFFUSION, SITTING DROP' 5.0 293 ;27% PEG 1500, 100 mM sodium acetate pH 5.0, 150 mM LiCl2, 50 mM NaCl, 5 mM HEPES pH 7.0, 0.3 mM TCEP, VAPOR DIFFUSION, SITTING DROP, temperature 293K ; ? ? # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 100 ? 2 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 CCD 'MARMOSAIC 300 mm CCD' 2009-10-12 ? 2 CCD 'MARMOSAIC 300 mm CCD' 2009-10-18 ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.monochromator _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.pdbx_scattering_type 1 'SINGLE WAVELENGTH' 'Si(111)' 1 ? x-ray 2 MAD 'Si(111)' 1 ? x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 .97625 1.0 2 0.96426 1.0 3 0.97949 1.0 4 0.97965 1.0 5 0.99522 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_wavelength_list _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline 1 SYNCHROTRON 'APS BEAMLINE 21-ID-D' .97625 ? APS 21-ID-D 2 SYNCHROTRON 'APS BEAMLINE 23-ID-D' '0.96426, 0.97949, 0.97965, 0.99522' ? APS 23-ID-D # _reflns.entry_id 3KEV _reflns.d_resolution_high 1.300 _reflns.d_resolution_low 50.000 _reflns.number_obs 42243 _reflns.pdbx_Rmerge_I_obs 0.040 _reflns.pdbx_netI_over_sigmaI 16.000 _reflns.pdbx_chi_squared 1.012 _reflns.pdbx_redundancy 4.000 _reflns.percent_possible_obs 98.500 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all 42886 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1,2 # _reflns_shell.d_res_high 1.30 _reflns_shell.d_res_low 1.32 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.388 _reflns_shell.meanI_over_sigI_obs 2.6 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 1.114 _reflns_shell.pdbx_redundancy 3.00 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1849 _reflns_shell.percent_possible_all 87.20 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1,2 # _refine.entry_id 3KEV _refine.ls_d_res_high 1.300 _refine.ls_d_res_low 20.984 _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.460 _refine.ls_number_reflns_obs 42161 _refine.ls_number_reflns_all 42820 _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details random _refine.details ? _refine.ls_R_factor_all .156 _refine.ls_R_factor_obs 0.156 _refine.ls_R_factor_R_work 0.155 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.178 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.010 _refine.ls_number_reflns_R_free 2111 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 20.012 _refine.solvent_model_param_bsol 60.058 _refine.solvent_model_param_ksol 0.400 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -1.285 _refine.aniso_B[2][2] -2.060 _refine.aniso_B[3][3] 3.345 _refine.aniso_B[1][2] -0.000 _refine.aniso_B[1][3] 2.593 _refine.aniso_B[2][3] -0.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.160 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.110 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.900 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MAD, MR' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.922 _refine.B_iso_max 52.77 _refine.B_iso_min 7.22 _refine.occupancy_max 1.40 _refine.occupancy_min 0.19 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1,2 _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1525 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 13 _refine_hist.number_atoms_solvent 176 _refine_hist.number_atoms_total 1714 _refine_hist.d_res_high 1.300 _refine_hist.d_res_low 20.984 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 1800 0.018 ? ? 'X-RAY DIFFRACTION' ? f_angle_d 2465 1.566 ? ? 'X-RAY DIFFRACTION' ? f_chiral_restr 259 0.101 ? ? 'X-RAY DIFFRACTION' ? f_plane_restr 328 0.007 ? ? 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 679 17.426 ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 1.300 1.330 15 88.000 2388 . 0.183 0.197 . 124 . 2512 . . 'X-RAY DIFFRACTION' 1.330 1.363 15 96.000 2599 . 0.173 0.210 . 143 . 2742 . . 'X-RAY DIFFRACTION' 1.363 1.400 15 99.000 2640 . 0.156 0.200 . 148 . 2788 . . 'X-RAY DIFFRACTION' 1.400 1.442 15 100.000 2687 . 0.147 0.194 . 141 . 2828 . . 'X-RAY DIFFRACTION' 1.442 1.488 15 100.000 2741 . 0.134 0.192 . 126 . 2867 . . 'X-RAY DIFFRACTION' 1.488 1.541 15 100.000 2669 . 0.122 0.163 . 161 . 2830 . . 'X-RAY DIFFRACTION' 1.541 1.603 15 100.000 2717 . 0.116 0.160 . 139 . 2856 . . 'X-RAY DIFFRACTION' 1.603 1.676 15 100.000 2709 . 0.113 0.178 . 137 . 2846 . . 'X-RAY DIFFRACTION' 1.676 1.764 15 100.000 2696 . 0.116 0.125 . 137 . 2833 . . 'X-RAY DIFFRACTION' 1.764 1.875 15 100.000 2710 . 0.118 0.172 . 144 . 2854 . . 'X-RAY DIFFRACTION' 1.875 2.019 15 100.000 2706 . 0.130 0.153 . 133 . 2839 . . 'X-RAY DIFFRACTION' 2.019 2.222 15 100.000 2723 . 0.125 0.143 . 138 . 2861 . . 'X-RAY DIFFRACTION' 2.222 2.543 15 100.000 2718 . 0.142 0.178 . 139 . 2857 . . 'X-RAY DIFFRACTION' 2.543 3.203 15 100.000 2729 . 0.159 0.186 . 151 . 2880 . . 'X-RAY DIFFRACTION' 3.203 20.987 15 94.000 2618 . 0.169 0.171 . 150 . 2768 . . 'X-RAY DIFFRACTION' # _struct.entry_id 3KEV _struct.title 'X-ray crystal structure of a DCUN1 domain-containing protein from Galdieria sulfuraria' _struct.pdbx_descriptor 'Galdieria sulphuraria DCUN1 domain-containing protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3KEV _struct_keywords.text ;cullin, neddylation, DCUN1, DCN-1, E3, Center for Eukaryotic Structural Genomics, PSI, Protein Structure Initiative, CESG, structural genomics, unknown function ; _struct_keywords.pdbx_keywords 'structural genomics, unknown function' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 5 ? LYS A 17 ? ASP A 5 LYS A 17 1 ? 13 HELX_P HELX_P2 2 GLY A 25 ? ILE A 36 ? GLY A 25 ILE A 36 1 ? 12 HELX_P HELX_P3 3 ASP A 42 ? LEU A 52 ? ASP A 42 LEU A 52 1 ? 11 HELX_P HELX_P4 4 GLU A 62 ? LEU A 72 ? GLU A 62 LEU A 72 1 ? 11 HELX_P HELX_P5 5 SER A 76 ? ILE A 91 ? SER A 76 ILE A 91 1 ? 16 HELX_P HELX_P6 6 ASP A 93 ? LYS A 109 ? ASP A 93 LYS A 109 1 ? 17 HELX_P HELX_P7 7 PRO A 117 ? ARG A 130 ? PRO A 117 ARG A 130 1 ? 14 HELX_P HELX_P8 8 LEU A 135 ? LEU A 143 ? LEU A 135 LEU A 143 1 ? 9 HELX_P HELX_P9 9 LYS A 144 ? ASN A 146 ? LYS A 144 ASN A 146 5 ? 3 HELX_P HELX_P10 10 SER A 151 ? GLN A 163 ? SER A 151 GLN A 163 1 ? 13 HELX_P HELX_P11 11 PRO A 179 ? LYS A 190 ? PRO A 179 LYS A 190 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A THR 57 C ? ? ? 1_555 A CSO 58 N A ? A THR 57 A CSO 58 1_555 ? ? ? ? ? ? ? 1.324 ? covale2 covale ? ? A THR 57 C ? ? ? 1_555 A CSO 58 N B ? A THR 57 A CSO 58 1_555 ? ? ? ? ? ? ? 1.335 ? covale3 covale ? ? A THR 57 C ? ? ? 1_555 A CSO 58 N C ? A THR 57 A CSO 58 1_555 ? ? ? ? ? ? ? 1.328 ? covale4 covale ? ? A CSO 58 C A ? ? 1_555 A GLU 59 N A ? A CSO 58 A GLU 59 1_555 ? ? ? ? ? ? ? 1.294 ? covale5 covale ? ? A CSO 58 C B ? ? 1_555 A GLU 59 N B ? A CSO 58 A GLU 59 1_555 ? ? ? ? ? ? ? 1.326 ? covale6 covale ? ? A ALA 121 C ? ? ? 1_555 A MSE 122 N A ? A ALA 121 A MSE 122 1_555 ? ? ? ? ? ? ? 1.333 ? covale7 covale ? ? A ALA 121 C ? ? ? 1_555 A MSE 122 N B ? A ALA 121 A MSE 122 1_555 ? ? ? ? ? ? ? 1.330 ? covale8 covale ? ? A MSE 122 C A ? ? 1_555 A ALA 123 N ? ? A MSE 122 A ALA 123 1_555 ? ? ? ? ? ? ? 1.321 ? covale9 covale ? ? A MSE 122 C B ? ? 1_555 A ALA 123 N ? ? A MSE 122 A ALA 123 1_555 ? ? ? ? ? ? ? 1.331 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 23 ? ILE A 24 ? TYR A 23 ILE A 24 A 2 PHE A 60 ? SER A 61 ? PHE A 60 SER A 61 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id ILE _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 24 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id ILE _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 24 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id PHE _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 60 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id PHE _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 60 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE SO4 A 200' AC2 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE ACT A 201' AC3 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE ACT A 202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 SER A 85 ? SER A 85 . ? 1_555 ? 2 AC1 3 ARG A 88 ? ARG A 88 . ? 1_555 ? 3 AC1 3 HOH E . ? HOH A 254 . ? 1_555 ? 4 AC2 2 ARG A 152 ? ARG A 152 . ? 1_555 ? 5 AC2 2 HOH E . ? HOH A 258 . ? 1_555 ? 6 AC3 3 LYS A 6 ? LYS A 6 . ? 1_555 ? 7 AC3 3 GLU A 67 ? GLU A 67 . ? 1_555 ? 8 AC3 3 LEU A 135 ? LEU A 135 . ? 1_454 ? # _atom_sites.entry_id 3KEV _atom_sites.fract_transf_matrix[1][1] 0.027216 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.010541 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019076 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021835 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1 ? ? ? A . n A 1 2 LYS 2 2 ? ? ? A . n A 1 3 ARG 3 3 ? ? ? A . n A 1 4 ALA 4 4 4 ALA ALA A . n A 1 5 ASP 5 5 5 ASP ASP A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 ALA 8 8 8 ALA ALA A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 PHE 13 13 13 PHE PHE A . n A 1 14 GLN 14 14 14 GLN GLN A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 TYR 16 16 16 TYR TYR A . n A 1 17 LYS 17 17 17 LYS LYS A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 ASN 22 22 22 ASN ASN A . n A 1 23 TYR 23 23 23 TYR TYR A . n A 1 24 ILE 24 24 24 ILE ILE A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 ALA 26 26 26 ALA ALA A . n A 1 27 GLU 27 27 27 GLU GLU A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 GLN 30 30 30 GLN GLN A . n A 1 31 ARG 31 31 31 ARG ARG A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 PHE 33 33 33 PHE PHE A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 ASP 35 35 35 ASP ASP A . n A 1 36 ILE 36 36 36 ILE ILE A . n A 1 37 GLN 37 37 37 GLN GLN A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 PRO 40 40 40 PRO PRO A . n A 1 41 SER 41 41 41 SER SER A . n A 1 42 ASP 42 42 42 ASP ASP A . n A 1 43 VAL 43 43 43 VAL VAL A . n A 1 44 VAL 44 44 44 VAL VAL A . n A 1 45 THR 45 45 45 THR THR A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 TRP 50 50 50 TRP TRP A . n A 1 51 LYS 51 51 51 LYS LYS A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 LYS 53 53 53 LYS LYS A . n A 1 54 ALA 54 54 54 ALA ALA A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 SER 56 56 56 SER SER A . n A 1 57 THR 57 57 57 THR THR A . n A 1 58 CSO 58 58 58 CSO CSO A . n A 1 59 GLU 59 59 59 GLU GLU A . n A 1 60 PHE 60 60 60 PHE PHE A . n A 1 61 SER 61 61 61 SER SER A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 PHE 65 65 65 PHE PHE A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 GLU 67 67 67 GLU GLU A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 ASN 71 71 71 ASN ASN A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 GLN 73 73 73 GLN GLN A . n A 1 74 VAL 74 74 74 VAL VAL A . n A 1 75 ASP 75 75 75 ASP ASP A . n A 1 76 SER 76 76 76 SER SER A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 GLU 78 78 78 GLU GLU A . n A 1 79 LYS 79 79 79 LYS LYS A . n A 1 80 LEU 80 80 80 LEU LEU A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 ARG 82 82 82 ARG ARG A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 SER 86 86 86 SER SER A . n A 1 87 LEU 87 87 87 LEU LEU A . n A 1 88 ARG 88 88 88 ARG ARG A . n A 1 89 LYS 89 89 89 LYS LYS A . n A 1 90 GLU 90 90 90 GLU GLU A . n A 1 91 ILE 91 91 91 ILE ILE A . n A 1 92 GLU 92 92 92 GLU GLU A . n A 1 93 ASP 93 93 93 ASP ASP A . n A 1 94 PRO 94 94 94 PRO PRO A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 LYS 96 96 96 LYS LYS A . n A 1 97 PHE 97 97 97 PHE PHE A . n A 1 98 ARG 98 98 98 ARG ARG A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 PHE 100 100 100 PHE PHE A . n A 1 101 TYR 101 101 101 TYR TYR A . n A 1 102 GLN 102 102 102 GLN GLN A . n A 1 103 PHE 103 103 103 PHE PHE A . n A 1 104 VAL 104 104 104 VAL VAL A . n A 1 105 PHE 105 105 105 PHE PHE A . n A 1 106 GLN 106 106 106 GLN GLN A . n A 1 107 TYR 107 107 107 TYR TYR A . n A 1 108 SER 108 108 108 SER SER A . n A 1 109 LYS 109 109 109 LYS LYS A . n A 1 110 GLU 110 110 110 GLU GLU A . n A 1 111 PRO 111 111 111 PRO PRO A . n A 1 112 SER 112 112 112 SER SER A . n A 1 113 GLN 113 113 113 GLN GLN A . n A 1 114 ARG 114 114 114 ARG ARG A . n A 1 115 SER 115 115 115 SER SER A . n A 1 116 LEU 116 116 116 LEU LEU A . n A 1 117 PRO 117 117 117 PRO PRO A . n A 1 118 ALA 118 118 118 ALA ALA A . n A 1 119 GLU 119 119 119 GLU GLU A . n A 1 120 THR 120 120 120 THR THR A . n A 1 121 ALA 121 121 121 ALA ALA A . n A 1 122 MSE 122 122 122 MSE MSE A . n A 1 123 ALA 123 123 123 ALA ALA A . n A 1 124 LEU 124 124 124 LEU LEU A . n A 1 125 TRP 125 125 125 TRP TRP A . n A 1 126 ASP 126 126 126 ASP ASP A . n A 1 127 VAL 127 127 127 VAL VAL A . n A 1 128 LEU 128 128 128 LEU LEU A . n A 1 129 LEU 129 129 129 LEU LEU A . n A 1 130 ARG 130 130 130 ARG ARG A . n A 1 131 GLY 131 131 131 GLY GLY A . n A 1 132 ARG 132 132 132 ARG ARG A . n A 1 133 PHE 133 133 133 PHE PHE A . n A 1 134 SER 134 134 134 SER SER A . n A 1 135 LEU 135 135 135 LEU LEU A . n A 1 136 LEU 136 136 136 LEU LEU A . n A 1 137 ASP 137 137 137 ASP ASP A . n A 1 138 SER 138 138 138 SER SER A . n A 1 139 TRP 139 139 139 TRP TRP A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 GLU 141 141 141 GLU GLU A . n A 1 142 PHE 142 142 142 PHE PHE A . n A 1 143 LEU 143 143 143 LEU LEU A . n A 1 144 LYS 144 144 144 LYS LYS A . n A 1 145 ASN 145 145 145 ASN ASN A . n A 1 146 ASN 146 146 146 ASN ASN A . n A 1 147 THR 147 147 147 THR THR A . n A 1 148 HIS 148 148 148 HIS HIS A . n A 1 149 SER 149 149 149 SER SER A . n A 1 150 ILE 150 150 150 ILE ILE A . n A 1 151 SER 151 151 151 SER SER A . n A 1 152 ARG 152 152 152 ARG ARG A . n A 1 153 ASP 153 153 153 ASP ASP A . n A 1 154 THR 154 154 154 THR THR A . n A 1 155 TRP 155 155 155 TRP TRP A . n A 1 156 ASN 156 156 156 ASN ASN A . n A 1 157 LEU 157 157 157 LEU LEU A . n A 1 158 LEU 158 158 158 LEU LEU A . n A 1 159 TYR 159 159 159 TYR TYR A . n A 1 160 ASP 160 160 160 ASP ASP A . n A 1 161 PHE 161 161 161 PHE PHE A . n A 1 162 SER 162 162 162 SER SER A . n A 1 163 GLN 163 163 163 GLN GLN A . n A 1 164 LEU 164 164 164 LEU LEU A . n A 1 165 SER 165 165 ? ? ? A . n A 1 166 GLU 166 166 ? ? ? A . n A 1 167 LYS 167 167 167 LYS LYS A . n A 1 168 ASP 168 168 168 ASP ASP A . n A 1 169 LEU 169 169 169 LEU LEU A . n A 1 170 SER 170 170 170 SER SER A . n A 1 171 ASP 171 171 171 ASP ASP A . n A 1 172 TYR 172 172 172 TYR TYR A . n A 1 173 ASP 173 173 173 ASP ASP A . n A 1 174 GLU 174 174 ? ? ? A . n A 1 175 ASN 175 175 ? ? ? A . n A 1 176 GLY 176 176 ? ? ? A . n A 1 177 ALA 177 177 177 ALA ALA A . n A 1 178 TRP 178 178 178 TRP TRP A . n A 1 179 PRO 179 179 179 PRO PRO A . n A 1 180 VAL 180 180 180 VAL VAL A . n A 1 181 LEU 181 181 181 LEU LEU A . n A 1 182 ILE 182 182 182 ILE ILE A . n A 1 183 ASP 183 183 183 ASP ASP A . n A 1 184 ASP 184 184 184 ASP ASP A . n A 1 185 PHE 185 185 185 PHE PHE A . n A 1 186 VAL 186 186 186 VAL VAL A . n A 1 187 LYS 187 187 187 LYS LYS A . n A 1 188 TRP 188 188 188 TRP TRP A . n A 1 189 LEU 189 189 189 LEU LEU A . n A 1 190 LYS 190 190 190 LYS LYS A . n A 1 191 HIS 191 191 191 HIS HIS A . n A 1 192 GLU 192 192 192 GLU GLU A . n A 1 193 GLN 193 193 ? ? ? A . n A 1 194 PRO 194 194 ? ? ? A . n A 1 195 ASN 195 195 ? ? ? A . n A 1 196 LYS 196 196 ? ? ? A . n A 1 197 HIS 197 197 ? ? ? A . n A 1 198 GLU 198 198 ? ? ? A . n A 1 199 SER 199 199 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Center for Eukaryotic Structural Genomics' _pdbx_SG_project.initial_of_center CESG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 200 1 SO4 SO4 A . C 3 ACT 1 201 1 ACT ACT A . D 3 ACT 1 202 2 ACT ACT A . E 4 HOH 1 203 1 HOH HOH A . E 4 HOH 2 204 2 HOH HOH A . E 4 HOH 3 205 3 HOH HOH A . E 4 HOH 4 206 4 HOH HOH A . E 4 HOH 5 207 5 HOH HOH A . E 4 HOH 6 208 6 HOH HOH A . E 4 HOH 7 209 7 HOH HOH A . E 4 HOH 8 210 8 HOH HOH A . E 4 HOH 9 211 9 HOH HOH A . E 4 HOH 10 212 10 HOH HOH A . E 4 HOH 11 213 11 HOH HOH A . E 4 HOH 12 214 12 HOH HOH A . E 4 HOH 13 215 13 HOH HOH A . E 4 HOH 14 216 14 HOH HOH A . E 4 HOH 15 217 15 HOH HOH A . E 4 HOH 16 218 16 HOH HOH A . E 4 HOH 17 219 17 HOH HOH A . E 4 HOH 18 220 18 HOH HOH A . E 4 HOH 19 221 19 HOH HOH A . E 4 HOH 20 222 20 HOH HOH A . E 4 HOH 21 223 21 HOH HOH A . E 4 HOH 22 224 22 HOH HOH A . E 4 HOH 23 225 24 HOH HOH A . E 4 HOH 24 226 25 HOH HOH A . E 4 HOH 25 227 26 HOH HOH A . E 4 HOH 26 228 27 HOH HOH A . E 4 HOH 27 229 28 HOH HOH A . E 4 HOH 28 230 29 HOH HOH A . E 4 HOH 29 231 30 HOH HOH A . E 4 HOH 30 232 31 HOH HOH A . E 4 HOH 31 233 32 HOH HOH A . E 4 HOH 32 234 33 HOH HOH A . E 4 HOH 33 235 34 HOH HOH A . E 4 HOH 34 236 35 HOH HOH A . E 4 HOH 35 237 36 HOH HOH A . E 4 HOH 36 238 37 HOH HOH A . E 4 HOH 37 239 38 HOH HOH A . E 4 HOH 38 240 39 HOH HOH A . E 4 HOH 39 241 40 HOH HOH A . E 4 HOH 40 242 42 HOH HOH A . E 4 HOH 41 243 43 HOH HOH A . E 4 HOH 42 244 44 HOH HOH A . E 4 HOH 43 245 45 HOH HOH A . E 4 HOH 44 246 46 HOH HOH A . E 4 HOH 45 247 47 HOH HOH A . E 4 HOH 46 248 48 HOH HOH A . E 4 HOH 47 249 49 HOH HOH A . E 4 HOH 48 250 50 HOH HOH A . E 4 HOH 49 251 51 HOH HOH A . E 4 HOH 50 252 52 HOH HOH A . E 4 HOH 51 253 53 HOH HOH A . E 4 HOH 52 254 54 HOH HOH A . E 4 HOH 53 255 55 HOH HOH A . E 4 HOH 54 256 56 HOH HOH A . E 4 HOH 55 257 57 HOH HOH A . E 4 HOH 56 258 58 HOH HOH A . E 4 HOH 57 259 59 HOH HOH A . E 4 HOH 58 260 60 HOH HOH A . E 4 HOH 59 261 61 HOH HOH A . E 4 HOH 60 262 62 HOH HOH A . E 4 HOH 61 263 63 HOH HOH A . E 4 HOH 62 264 64 HOH HOH A . E 4 HOH 63 265 66 HOH HOH A . E 4 HOH 64 266 67 HOH HOH A . E 4 HOH 65 267 68 HOH HOH A . E 4 HOH 66 268 70 HOH HOH A . E 4 HOH 67 269 71 HOH HOH A . E 4 HOH 68 270 73 HOH HOH A . E 4 HOH 69 271 74 HOH HOH A . E 4 HOH 70 272 75 HOH HOH A . E 4 HOH 71 273 76 HOH HOH A . E 4 HOH 72 274 77 HOH HOH A . E 4 HOH 73 275 79 HOH HOH A . E 4 HOH 74 276 80 HOH HOH A . E 4 HOH 75 277 81 HOH HOH A . E 4 HOH 76 278 82 HOH HOH A . E 4 HOH 77 279 83 HOH HOH A . E 4 HOH 78 280 84 HOH HOH A . E 4 HOH 79 281 85 HOH HOH A . E 4 HOH 80 282 86 HOH HOH A . E 4 HOH 81 283 87 HOH HOH A . E 4 HOH 82 284 88 HOH HOH A . E 4 HOH 83 285 89 HOH HOH A . E 4 HOH 84 286 90 HOH HOH A . E 4 HOH 85 287 91 HOH HOH A . E 4 HOH 86 288 92 HOH HOH A . E 4 HOH 87 289 93 HOH HOH A . E 4 HOH 88 290 94 HOH HOH A . E 4 HOH 89 291 96 HOH HOH A . E 4 HOH 90 292 97 HOH HOH A . E 4 HOH 91 293 98 HOH HOH A . E 4 HOH 92 294 99 HOH HOH A . E 4 HOH 93 295 101 HOH HOH A . E 4 HOH 94 296 102 HOH HOH A . E 4 HOH 95 297 103 HOH HOH A . E 4 HOH 96 298 104 HOH HOH A . E 4 HOH 97 299 105 HOH HOH A . E 4 HOH 98 300 106 HOH HOH A . E 4 HOH 99 301 107 HOH HOH A . E 4 HOH 100 302 108 HOH HOH A . E 4 HOH 101 303 109 HOH HOH A . E 4 HOH 102 304 110 HOH HOH A . E 4 HOH 103 305 111 HOH HOH A . E 4 HOH 104 306 112 HOH HOH A . E 4 HOH 105 307 113 HOH HOH A . E 4 HOH 106 308 114 HOH HOH A . E 4 HOH 107 309 115 HOH HOH A . E 4 HOH 108 310 116 HOH HOH A . E 4 HOH 109 311 117 HOH HOH A . E 4 HOH 110 312 118 HOH HOH A . E 4 HOH 111 313 119 HOH HOH A . E 4 HOH 112 314 120 HOH HOH A . E 4 HOH 113 315 121 HOH HOH A . E 4 HOH 114 316 122 HOH HOH A . E 4 HOH 115 317 123 HOH HOH A . E 4 HOH 116 318 124 HOH HOH A . E 4 HOH 117 319 125 HOH HOH A . E 4 HOH 118 320 126 HOH HOH A . E 4 HOH 119 321 127 HOH HOH A . E 4 HOH 120 322 128 HOH HOH A . E 4 HOH 121 323 129 HOH HOH A . E 4 HOH 122 324 130 HOH HOH A . E 4 HOH 123 325 133 HOH HOH A . E 4 HOH 124 326 134 HOH HOH A . E 4 HOH 125 327 135 HOH HOH A . E 4 HOH 126 328 136 HOH HOH A . E 4 HOH 127 329 138 HOH HOH A . E 4 HOH 128 330 139 HOH HOH A . E 4 HOH 129 331 140 HOH HOH A . E 4 HOH 130 332 141 HOH HOH A . E 4 HOH 131 333 143 HOH HOH A . E 4 HOH 132 334 144 HOH HOH A . E 4 HOH 133 335 145 HOH HOH A . E 4 HOH 134 336 146 HOH HOH A . E 4 HOH 135 337 148 HOH HOH A . E 4 HOH 136 338 149 HOH HOH A . E 4 HOH 137 339 150 HOH HOH A . E 4 HOH 138 340 152 HOH HOH A . E 4 HOH 139 341 153 HOH HOH A . E 4 HOH 140 342 154 HOH HOH A . E 4 HOH 141 343 155 HOH HOH A . E 4 HOH 142 344 156 HOH HOH A . E 4 HOH 143 345 158 HOH HOH A . E 4 HOH 144 346 159 HOH HOH A . E 4 HOH 145 347 160 HOH HOH A . E 4 HOH 146 348 161 HOH HOH A . E 4 HOH 147 349 162 HOH HOH A . E 4 HOH 148 350 163 HOH HOH A . E 4 HOH 149 351 164 HOH HOH A . E 4 HOH 150 352 165 HOH HOH A . E 4 HOH 151 353 166 HOH HOH A . E 4 HOH 152 354 167 HOH HOH A . E 4 HOH 153 355 168 HOH HOH A . E 4 HOH 154 356 169 HOH HOH A . E 4 HOH 155 357 171 HOH HOH A . E 4 HOH 156 358 173 HOH HOH A . E 4 HOH 157 359 174 HOH HOH A . E 4 HOH 158 360 175 HOH HOH A . E 4 HOH 159 361 176 HOH HOH A . E 4 HOH 160 362 177 HOH HOH A . E 4 HOH 161 363 179 HOH HOH A . E 4 HOH 162 364 180 HOH HOH A . E 4 HOH 163 365 181 HOH HOH A . E 4 HOH 164 366 182 HOH HOH A . E 4 HOH 165 367 183 HOH HOH A . E 4 HOH 166 368 184 HOH HOH A . E 4 HOH 167 369 185 HOH HOH A . E 4 HOH 168 370 186 HOH HOH A . E 4 HOH 169 371 187 HOH HOH A . E 4 HOH 170 372 188 HOH HOH A . E 4 HOH 171 373 189 HOH HOH A . E 4 HOH 172 374 191 HOH HOH A . E 4 HOH 173 375 192 HOH HOH A . E 4 HOH 174 376 193 HOH HOH A . E 4 HOH 175 377 194 HOH HOH A . E 4 HOH 176 378 195 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A CSO 58 A CSO 58 ? CYS S-HYDROXYCYSTEINE 2 A MSE 122 A MSE 122 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-12-01 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.contact_author' 3 3 'Structure model' '_software.contact_author_email' 4 3 'Structure model' '_software.date' 5 3 'Structure model' '_software.language' 6 3 'Structure model' '_software.location' 7 3 'Structure model' '_software.name' 8 3 'Structure model' '_software.type' 9 3 'Structure model' '_software.version' # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 1.810 _diffrn_reflns.pdbx_d_res_low 50.000 _diffrn_reflns.pdbx_number_obs 15091 _diffrn_reflns.pdbx_Rmerge_I_obs 0.075 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 1.24 _diffrn_reflns.av_sigmaI_over_netI 23.15 _diffrn_reflns.pdbx_redundancy 7.50 _diffrn_reflns.pdbx_percent_possible_obs 97.70 _diffrn_reflns.number 112798 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 4.91 50.00 ? ? 0.080 ? 1.332 7.30 97.50 1 3.90 4.91 ? ? 0.046 ? 0.880 7.50 99.20 1 3.41 3.90 ? ? 0.041 ? 0.892 7.30 99.00 1 3.09 3.41 ? ? 0.043 ? 0.912 7.30 98.80 1 2.87 3.09 ? ? 0.046 ? 0.944 7.40 99.00 1 2.70 2.87 ? ? 0.053 ? 1.049 7.40 99.00 1 2.57 2.70 ? ? 0.061 ? 1.183 7.50 98.40 1 2.46 2.57 ? ? 0.073 ? 1.262 7.60 98.30 1 2.36 2.46 ? ? 0.076 ? 1.310 7.70 98.20 1 2.28 2.36 ? ? 0.076 ? 1.234 7.70 98.20 1 2.21 2.28 ? ? 0.085 ? 1.289 7.60 99.20 1 2.15 2.21 ? ? 0.094 ? 1.295 7.70 97.20 1 2.09 2.15 ? ? 0.105 ? 1.260 7.70 97.70 1 2.04 2.09 ? ? 0.112 ? 1.346 7.70 98.30 1 1.99 2.04 ? ? 0.131 ? 1.387 7.70 96.90 1 1.95 1.99 ? ? 0.132 ? 1.396 7.60 98.80 1 1.91 1.95 ? ? 0.160 ? 1.460 7.60 96.10 1 1.87 1.91 ? ? 0.185 ? 1.440 7.50 98.40 1 1.84 1.87 ? ? 0.192 ? 1.408 7.40 96.00 1 1.81 1.84 ? ? 0.231 ? 1.587 6.30 89.70 # loop_ _pdbx_phasing_MAD_set.id _pdbx_phasing_MAD_set.d_res_low _pdbx_phasing_MAD_set.d_res_high _pdbx_phasing_MAD_set.reflns_acentric _pdbx_phasing_MAD_set.reflns_centric _pdbx_phasing_MAD_set.R_cullis_acentric _pdbx_phasing_MAD_set.R_cullis_centric ISO_1 34.22 1.79 14383 695 0.000 0.000 ISO_2 34.22 1.79 14378 692 0.481 0.488 ISO_3 34.22 1.79 13794 660 0.731 0.734 ISO_4 34.22 1.79 14360 692 0.642 0.670 ANO_1 34.22 1.79 14323 0 0.958 0.000 ANO_2 34.22 1.79 14950 0 0.974 0.000 ANO_3 34.22 1.79 13742 0 0.999 0.000 ANO_4 34.22 1.79 14418 0 0.994 0.000 # loop_ _pdbx_phasing_MAD_set_shell.id _pdbx_phasing_MAD_set_shell.d_res_low _pdbx_phasing_MAD_set_shell.d_res_high _pdbx_phasing_MAD_set_shell.reflns_acentric _pdbx_phasing_MAD_set_shell.reflns_centric _pdbx_phasing_MAD_set_shell.R_cullis_acentric _pdbx_phasing_MAD_set_shell.R_cullis_centric ISO_1 34.22 7.81 158 34 0.000 0.000 ISO_1 7.81 5.60 304 39 0.000 0.000 ISO_1 5.60 4.59 398 37 0.000 0.000 ISO_1 4.59 3.98 469 39 0.000 0.000 ISO_1 3.98 3.57 535 37 0.000 0.000 ISO_1 3.57 3.26 591 40 0.000 0.000 ISO_1 3.26 3.02 637 34 0.000 0.000 ISO_1 3.02 2.83 708 35 0.000 0.000 ISO_1 2.83 2.67 735 39 0.000 0.000 ISO_1 2.67 2.53 774 34 0.000 0.000 ISO_1 2.53 2.41 817 35 0.000 0.000 ISO_1 2.41 2.31 871 37 0.000 0.000 ISO_1 2.31 2.22 899 36 0.000 0.000 ISO_1 2.22 2.14 922 31 0.000 0.000 ISO_1 2.14 2.07 961 33 0.000 0.000 ISO_1 2.07 2.00 992 38 0.000 0.000 ISO_1 2.00 1.94 1017 31 0.000 0.000 ISO_1 1.94 1.89 1058 41 0.000 0.000 ISO_1 1.89 1.84 1075 26 0.000 0.000 ISO_1 1.84 1.79 462 19 0.000 0.000 ANO_1 34.22 7.81 157 0 0.769 0.000 ANO_1 7.81 5.60 304 0 0.660 0.000 ANO_1 5.60 4.59 398 0 0.807 0.000 ANO_1 4.59 3.98 469 0 0.868 0.000 ANO_1 3.98 3.57 531 0 0.872 0.000 ANO_1 3.57 3.26 587 0 0.894 0.000 ANO_1 3.26 3.02 633 0 0.858 0.000 ANO_1 3.02 2.83 706 0 0.880 0.000 ANO_1 2.83 2.67 733 0 0.888 0.000 ANO_1 2.67 2.53 772 0 0.923 0.000 ANO_1 2.53 2.41 817 0 0.937 0.000 ANO_1 2.41 2.31 871 0 0.965 0.000 ANO_1 2.31 2.22 898 0 0.973 0.000 ANO_1 2.22 2.14 922 0 0.984 0.000 ANO_1 2.14 2.07 959 0 0.990 0.000 ANO_1 2.07 2.00 992 0 0.992 0.000 ANO_1 2.00 1.94 1016 0 0.995 0.000 ANO_1 1.94 1.89 1057 0 0.997 0.000 ANO_1 1.89 1.84 1072 0 0.998 0.000 ANO_1 1.84 1.79 429 0 0.999 0.000 ISO_2 34.22 7.81 155 34 0.570 0.871 ISO_2 7.81 5.60 304 39 0.430 0.537 ISO_2 5.60 4.59 398 37 0.459 0.430 ISO_2 4.59 3.98 469 39 0.417 0.389 ISO_2 3.98 3.57 535 37 0.445 0.275 ISO_2 3.57 3.26 591 40 0.359 0.398 ISO_2 3.26 3.02 637 34 0.329 0.399 ISO_2 3.02 2.83 708 35 0.339 0.333 ISO_2 2.83 2.67 735 39 0.357 0.432 ISO_2 2.67 2.53 774 34 0.353 0.406 ISO_2 2.53 2.41 817 35 0.355 0.400 ISO_2 2.41 2.31 871 37 0.400 0.414 ISO_2 2.31 2.22 899 36 0.406 0.580 ISO_2 2.22 2.14 922 31 0.455 0.570 ISO_2 2.14 2.07 961 33 0.487 0.619 ISO_2 2.07 2.00 992 38 0.516 0.660 ISO_2 2.00 1.94 1017 31 0.530 0.570 ISO_2 1.94 1.89 1058 41 0.577 0.551 ISO_2 1.89 1.84 1074 24 0.634 0.650 ISO_2 1.84 1.79 461 18 0.599 0.458 ANO_2 34.22 7.81 152 0 0.786 0.000 ANO_2 7.81 5.60 304 0 0.674 0.000 ANO_2 5.60 4.59 398 0 0.808 0.000 ANO_2 4.59 3.98 469 0 0.887 0.000 ANO_2 3.98 3.57 535 0 0.881 0.000 ANO_2 3.57 3.26 590 0 0.884 0.000 ANO_2 3.26 3.02 640 0 0.891 0.000 ANO_2 3.02 2.83 708 0 0.901 0.000 ANO_2 2.83 2.67 735 0 0.907 0.000 ANO_2 2.67 2.53 774 0 0.944 0.000 ANO_2 2.53 2.41 817 0 0.957 0.000 ANO_2 2.41 2.31 870 0 0.977 0.000 ANO_2 2.31 2.22 899 0 0.982 0.000 ANO_2 2.22 2.14 923 0 0.990 0.000 ANO_2 2.14 2.07 963 0 0.994 0.000 ANO_2 2.07 2.00 992 0 0.996 0.000 ANO_2 2.00 1.94 1016 0 0.997 0.000 ANO_2 1.94 1.89 1058 0 0.998 0.000 ANO_2 1.89 1.84 1075 0 0.999 0.000 ANO_2 1.84 1.79 1032 0 1.001 0.000 ISO_3 34.22 7.81 144 33 0.770 0.841 ISO_3 7.81 5.60 304 38 0.743 0.778 ISO_3 5.60 4.59 398 37 0.725 0.677 ISO_3 4.59 3.98 469 39 0.700 0.693 ISO_3 3.98 3.57 535 37 0.707 0.673 ISO_3 3.57 3.26 590 40 0.706 0.731 ISO_3 3.26 3.02 637 34 0.704 0.701 ISO_3 3.02 2.83 708 35 0.713 0.675 ISO_3 2.83 2.67 735 39 0.702 0.752 ISO_3 2.67 2.53 774 34 0.710 0.803 ISO_3 2.53 2.41 817 35 0.705 0.751 ISO_3 2.41 2.31 870 37 0.718 0.690 ISO_3 2.31 2.22 899 36 0.713 0.777 ISO_3 2.22 2.14 922 31 0.735 0.802 ISO_3 2.14 2.07 961 33 0.746 0.721 ISO_3 2.07 2.00 992 38 0.760 0.833 ISO_3 2.00 1.94 1017 29 0.771 0.713 ISO_3 1.94 1.89 1050 38 0.796 0.849 ISO_3 1.89 1.84 970 16 0.855 0.711 ISO_3 1.84 1.79 2 1 1.376 0.969 ANO_3 34.22 7.81 142 0 0.969 0.000 ANO_3 7.81 5.60 304 0 0.948 0.000 ANO_3 5.60 4.59 397 0 0.972 0.000 ANO_3 4.59 3.98 469 0 0.982 0.000 ANO_3 3.98 3.57 534 0 0.989 0.000 ANO_3 3.57 3.26 589 0 0.983 0.000 ANO_3 3.26 3.02 641 0 0.989 0.000 ANO_3 3.02 2.83 708 0 0.998 0.000 ANO_3 2.83 2.67 736 0 0.999 0.000 ANO_3 2.67 2.53 774 0 0.999 0.000 ANO_3 2.53 2.41 817 0 0.999 0.000 ANO_3 2.41 2.31 870 0 0.999 0.000 ANO_3 2.31 2.22 899 0 0.999 0.000 ANO_3 2.22 2.14 921 0 1.000 0.000 ANO_3 2.14 2.07 960 0 1.000 0.000 ANO_3 2.07 2.00 991 0 1.000 0.000 ANO_3 2.00 1.94 1016 0 1.000 0.000 ANO_3 1.94 1.89 1044 0 1.000 0.000 ANO_3 1.89 1.84 929 0 1.000 0.000 ANO_3 1.84 1.79 1 0 1.000 0.000 ISO_4 34.22 7.81 141 32 0.777 0.863 ISO_4 7.81 5.60 304 39 0.713 0.776 ISO_4 5.60 4.59 398 37 0.660 0.607 ISO_4 4.59 3.98 468 39 0.599 0.621 ISO_4 3.98 3.57 535 37 0.597 0.592 ISO_4 3.57 3.26 589 40 0.593 0.646 ISO_4 3.26 3.02 637 34 0.595 0.610 ISO_4 3.02 2.83 708 35 0.613 0.541 ISO_4 2.83 2.67 735 39 0.600 0.650 ISO_4 2.67 2.53 774 34 0.615 0.734 ISO_4 2.53 2.41 817 35 0.611 0.615 ISO_4 2.41 2.31 871 37 0.624 0.611 ISO_4 2.31 2.22 899 36 0.611 0.648 ISO_4 2.22 2.14 922 31 0.643 0.751 ISO_4 2.14 2.07 961 33 0.647 0.654 ISO_4 2.07 2.00 992 38 0.665 0.732 ISO_4 2.00 1.94 1017 31 0.671 0.654 ISO_4 1.94 1.89 1057 41 0.703 0.743 ISO_4 1.89 1.84 1075 26 0.767 0.785 ISO_4 1.84 1.79 460 18 0.816 0.737 ANO_4 34.22 7.81 138 0 0.897 0.000 ANO_4 7.81 5.60 304 0 0.771 0.000 ANO_4 5.60 4.59 396 0 0.901 0.000 ANO_4 4.59 3.98 466 0 0.939 0.000 ANO_4 3.98 3.57 534 0 0.936 0.000 ANO_4 3.57 3.26 588 0 0.944 0.000 ANO_4 3.26 3.02 640 0 0.958 0.000 ANO_4 3.02 2.83 709 0 0.955 0.000 ANO_4 2.83 2.67 735 0 0.987 0.000 ANO_4 2.67 2.53 774 0 0.982 0.000 ANO_4 2.53 2.41 817 0 0.989 0.000 ANO_4 2.41 2.31 871 0 0.990 0.000 ANO_4 2.31 2.22 899 0 0.996 0.000 ANO_4 2.22 2.14 922 0 0.997 0.000 ANO_4 2.14 2.07 963 0 0.998 0.000 ANO_4 2.07 2.00 992 0 0.999 0.000 ANO_4 2.00 1.94 1017 0 0.999 0.000 ANO_4 1.94 1.89 1057 0 1.000 0.000 ANO_4 1.89 1.84 1068 0 1.000 0.000 ANO_4 1.84 1.79 528 0 1.000 0.000 # _pdbx_phasing_MAD_set_site.id 1 _pdbx_phasing_MAD_set_site.atom_type_symbol SE _pdbx_phasing_MAD_set_site.Cartn_x 5.162 _pdbx_phasing_MAD_set_site.Cartn_y 0.052 _pdbx_phasing_MAD_set_site.Cartn_z 12.191 _pdbx_phasing_MAD_set_site.occupancy 0.83 _pdbx_phasing_MAD_set_site.b_iso 36.84 # _pdbx_phasing_MR.entry_id 3KEV _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 1.600 _pdbx_phasing_MR.d_res_low_rotation 20.990 _pdbx_phasing_MR.d_res_high_translation 1.600 _pdbx_phasing_MR.d_res_low_translation 20.990 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _pdbx_phasing_dm.entry_id 3KEV _pdbx_phasing_dm.method 'Solvent flattening and Histogram matching' _pdbx_phasing_dm.reflns 15703 # loop_ _pdbx_phasing_dm_shell.d_res_high _pdbx_phasing_dm_shell.d_res_low _pdbx_phasing_dm_shell.delta_phi_final _pdbx_phasing_dm_shell.delta_phi_initial _pdbx_phasing_dm_shell.fom_acentric _pdbx_phasing_dm_shell.fom_centric _pdbx_phasing_dm_shell.fom _pdbx_phasing_dm_shell.reflns_acentric _pdbx_phasing_dm_shell.reflns_centric _pdbx_phasing_dm_shell.reflns 5.720 100.000 54.000 ? ? ? 0.782 ? ? 504 4.530 5.720 47.600 ? ? ? 0.915 ? ? 502 3.940 4.530 54.500 ? ? ? 0.914 ? ? 515 3.590 3.940 55.600 ? ? ? 0.914 ? ? 506 3.320 3.590 60.400 ? ? ? 0.878 ? ? 503 3.130 3.320 71.600 ? ? ? 0.878 ? ? 504 2.970 3.130 62.400 ? ? ? 0.861 ? ? 507 2.840 2.970 70.700 ? ? ? 0.882 ? ? 516 2.720 2.840 63.500 ? ? ? 0.875 ? ? 519 2.620 2.720 68.700 ? ? ? 0.881 ? ? 532 2.530 2.620 63.700 ? ? ? 0.876 ? ? 572 2.450 2.530 69.600 ? ? ? 0.877 ? ? 573 2.380 2.450 66.700 ? ? ? 0.865 ? ? 608 2.310 2.380 67.700 ? ? ? 0.876 ? ? 620 2.240 2.310 70.400 ? ? ? 0.860 ? ? 620 2.190 2.240 71.500 ? ? ? 0.875 ? ? 652 2.130 2.190 70.200 ? ? ? 0.886 ? ? 666 2.080 2.130 73.200 ? ? ? 0.865 ? ? 679 2.040 2.080 75.100 ? ? ? 0.858 ? ? 685 1.990 2.040 75.200 ? ? ? 0.867 ? ? 726 1.950 1.990 76.600 ? ? ? 0.848 ? ? 733 1.910 1.950 80.300 ? ? ? 0.833 ? ? 694 1.880 1.910 81.800 ? ? ? 0.810 ? ? 792 1.840 1.880 85.400 ? ? ? 0.791 ? ? 730 1.790 1.840 87.200 ? ? ? 0.743 ? ? 1245 # loop_ _phasing.method MAD MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 MOLREP . ? program 'Alexei Vaguine' alexei@ysbl.york.ac.uk phasing http://www.ccp4.ac.uk/dist/html/molrep.html Fortran_77 ? 4 SHARP . ? package 'Eric de La Fortelle' sharp-develop@globalphasing.com phasing http://www.globalphasing.com/sharp/ ? ? 5 DM 6.1 ? program 'Kevin Cowtan' kowtan@ysbl.york.ac.uk phasing http://www.ccp4.ac.uk/dist/html/dm.html Fortran_77 ? 6 PHENIX 1.5_2 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 7 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 8 HKL-2000 . ? ? ? ? 'data collection' ? ? ? 9 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CE1 _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 TYR _pdbx_validate_rmsd_bond.auth_seq_id_1 159 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CZ _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 TYR _pdbx_validate_rmsd_bond.auth_seq_id_2 159 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.302 _pdbx_validate_rmsd_bond.bond_target_value 1.381 _pdbx_validate_rmsd_bond.bond_deviation -0.079 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.013 _pdbx_validate_rmsd_bond.linker_flag N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASP _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 75 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -140.72 _pdbx_validate_torsion.psi 26.40 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 1 ? A SER 1 2 1 Y 1 A LYS 2 ? A LYS 2 3 1 Y 1 A ARG 3 ? A ARG 3 4 1 Y 1 A SER 165 ? A SER 165 5 1 Y 1 A GLU 166 ? A GLU 166 6 1 Y 1 A GLU 174 ? A GLU 174 7 1 Y 1 A ASN 175 ? A ASN 175 8 1 Y 1 A GLY 176 ? A GLY 176 9 1 Y 1 A GLN 193 ? A GLN 193 10 1 Y 1 A PRO 194 ? A PRO 194 11 1 Y 1 A ASN 195 ? A ASN 195 12 1 Y 1 A LYS 196 ? A LYS 196 13 1 Y 1 A HIS 197 ? A HIS 197 14 1 Y 1 A GLU 198 ? A GLU 198 15 1 Y 1 A SER 199 ? A SER 199 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 'ACETATE ION' ACT 4 water HOH #