HEADER CELL CYCLE/CALCIUM-BINDING PROTEIN 27-OCT-09 3KF9 TITLE CRYSTAL STRUCTURE OF THE SDCEN/SKMLCK COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: CALTRACTIN; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: UNP RESIDUES 20-168 OUT OF 168; COMPND 5 SYNONYM: CENTRIN; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: MYOSIN LIGHT CHAIN KINASE 2, SKELETAL/CARDIAC MUSCLE; COMPND 9 CHAIN: B, D; COMPND 10 FRAGMENT: UNP RESIDUES 566-587 OUT OF 596; COMPND 11 SYNONYM: MLCK2; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SCHERFFELIA DUBIA; SOURCE 3 ORGANISM_TAXID: 3190; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET24A(+); SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 OTHER_DETAILS: THE PEPTIDE WAS CHEMICALLY SYNTHESIZED. THIS SEQUENCE SOURCE 12 OCCURS IN HOMO SAPIENS KEYWDS CENTRIN, MYOSIN LIGHT CHAIN KINASE, CELL CYCLE, CELL DIVISION, KEYWDS 2 MITOSIS, CALMODULIN-BINDING, CELL CYCLE-CALCIUM-BINDING PROTEIN KEYWDS 3 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR L.RADU,L.ASSAIRI,Y.BLOUQUIT,D.DURAND,S.MIRON,J.B.CHARBONNIER, AUTHOR 2 C.T.CRAESCU REVDAT 2 01-NOV-23 3KF9 1 REMARK LINK REVDAT 1 26-JAN-11 3KF9 0 JRNL AUTH L.RADU,S.MIRON,D.DURAND,L.ASSAIRI,Y.BLOUQUIT,J.B.CHARBONNIER JRNL TITL STRUCTURAL FEATURES OF THE COMPLEXES FORMED BY SCHERFFELIA JRNL TITL 2 DUBIA CENTRIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.500 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.0 REMARK 3 NUMBER OF REFLECTIONS : 10318 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.290 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 525 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 762 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.24 REMARK 3 BIN R VALUE (WORKING SET) : 0.2340 REMARK 3 BIN FREE R VALUE SET COUNT : 38 REMARK 3 BIN FREE R VALUE : 0.3810 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2731 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 69 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.74 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.28000 REMARK 3 B22 (A**2) : 1.50000 REMARK 3 B33 (A**2) : -0.23000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.410 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.286 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 28.577 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.911 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.819 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2759 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3659 ; 1.451 ; 1.970 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 337 ; 5.235 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 142 ;32.603 ;25.070 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 581 ;18.272 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 21 ;17.250 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 387 ; 0.101 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2035 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1681 ; 0.474 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2674 ; 0.929 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1078 ; 1.757 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 985 ; 2.979 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 2 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 0 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 1172 ; 0.41 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 1172 ; 0.63 ; 2.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : B D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 0 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 2 A (A): 177 ; 0.46 ; 0.50 REMARK 3 MEDIUM THERMAL 2 A (A**2): 177 ; 0.59 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 20 A 168 REMARK 3 ORIGIN FOR THE GROUP (A): 0.6609 -0.7912 7.3821 REMARK 3 T TENSOR REMARK 3 T11: 0.0816 T22: 0.0066 REMARK 3 T33: 0.0162 T12: -0.0054 REMARK 3 T13: 0.0005 T23: -0.0096 REMARK 3 L TENSOR REMARK 3 L11: 2.7299 L22: 0.8691 REMARK 3 L33: 1.2384 L12: -0.6047 REMARK 3 L13: -0.8375 L23: 0.5276 REMARK 3 S TENSOR REMARK 3 S11: -0.0098 S12: -0.0432 S13: 0.1172 REMARK 3 S21: 0.0724 S22: -0.0021 S23: -0.0338 REMARK 3 S31: -0.0336 S32: -0.0265 S33: 0.0119 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 22 REMARK 3 ORIGIN FOR THE GROUP (A): -1.0152 0.1699 6.1983 REMARK 3 T TENSOR REMARK 3 T11: 0.1260 T22: 0.0830 REMARK 3 T33: 0.0467 T12: -0.0531 REMARK 3 T13: 0.0262 T23: -0.0105 REMARK 3 L TENSOR REMARK 3 L11: 7.1843 L22: 8.0400 REMARK 3 L33: 2.0515 L12: -4.5408 REMARK 3 L13: -0.4115 L23: 2.5878 REMARK 3 S TENSOR REMARK 3 S11: 0.1626 S12: 0.0275 S13: -0.0619 REMARK 3 S21: -0.2739 S22: -0.2943 S23: 0.1994 REMARK 3 S31: -0.1263 S32: -0.0117 S33: 0.1318 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 20 C 168 REMARK 3 ORIGIN FOR THE GROUP (A): 9.2005 7.3057 36.2388 REMARK 3 T TENSOR REMARK 3 T11: 0.0880 T22: 0.0527 REMARK 3 T33: 0.0580 T12: -0.0083 REMARK 3 T13: -0.0013 T23: -0.0034 REMARK 3 L TENSOR REMARK 3 L11: 3.4364 L22: 0.7500 REMARK 3 L33: 1.0643 L12: -0.6028 REMARK 3 L13: -0.4232 L23: 0.2511 REMARK 3 S TENSOR REMARK 3 S11: -0.0247 S12: -0.1075 S13: -0.2944 REMARK 3 S21: 0.0135 S22: 0.0248 S23: 0.0543 REMARK 3 S31: -0.0190 S32: -0.0111 S33: -0.0001 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 2 D 22 REMARK 3 ORIGIN FOR THE GROUP (A): 11.0119 9.3681 36.3691 REMARK 3 T TENSOR REMARK 3 T11: 0.1553 T22: 0.2235 REMARK 3 T33: 0.0772 T12: 0.0368 REMARK 3 T13: 0.0354 T23: -0.0416 REMARK 3 L TENSOR REMARK 3 L11: 11.6217 L22: 12.2871 REMARK 3 L33: 8.2663 L12: 6.3374 REMARK 3 L13: -4.1576 L23: -7.5168 REMARK 3 S TENSOR REMARK 3 S11: -0.1399 S12: -0.3237 S13: -0.2309 REMARK 3 S21: 0.4488 S22: 0.4275 S23: 0.0008 REMARK 3 S31: -0.5413 S32: -0.5567 S33: -0.2876 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3KF9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-NOV-09. REMARK 100 THE DEPOSITION ID IS D_1000055918. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-SEP-09 REMARK 200 TEMPERATURE (KELVIN) : 200 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9756 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : KIRKPATRICK-BAEZ PAIR OF BI REMARK 200 -MORPH MIRRORS PLUS CHANNEL CUT REMARK 200 CRYOGENICALLY COOLED REMARK 200 MONOCHROMATOR CRYSTAL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10844 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.10400 REMARK 200 R SYM (I) : 0.10400 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.23500 REMARK 200 R SYM FOR SHELL (I) : 0.23500 REMARK 200 <I/SIGMA(I)> FOR SHELL : 6.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1QTX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MPEG 2000, NACACODYLATE 0.1M, PH 6.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.37500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.76500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.87500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 64.76500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.37500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.87500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -65.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -78.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS D 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 24 CD OE1 OE2 REMARK 470 GLU A 63 CG CD OE1 OE2 REMARK 470 GLU A 136 CD OE1 OE2 REMARK 470 GLU C 23 CG CD OE1 OE2 REMARK 470 GLU C 59 CG CD OE1 OE2 REMARK 470 GLU C 63 CG CD OE1 OE2 REMARK 470 GLU C 140 CG CD OE1 OE2 REMARK 470 ARG C 147 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 182 O HOH A 183 2.09 REMARK 500 O HOH C 6 O HOH C 178 2.10 REMARK 500 O ASP A 146 OE1 GLU A 157 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 132 73.02 -104.83 REMARK 500 ARG A 147 -54.65 69.95 REMARK 500 ASN C 132 70.70 45.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 303 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 17 O REMARK 620 2 ASP A 110 OD1 152.5 REMARK 620 3 ASP A 112 OD1 75.0 83.3 REMARK 620 4 THR A 114 OG1 83.3 84.6 101.3 REMARK 620 5 LYS A 116 O 107.8 95.2 174.6 83.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 37 OD1 REMARK 620 2 ASP A 39 OD1 72.6 REMARK 620 3 SER A 41 OG 90.3 98.6 REMARK 620 4 THR A 43 O 78.4 150.4 87.2 REMARK 620 5 GLU A 48 OE1 109.7 110.3 148.5 73.9 REMARK 620 6 GLU A 48 OE2 84.7 62.5 161.1 109.5 49.2 REMARK 620 7 HOH A 193 O 156.1 85.3 83.9 124.2 86.2 93.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 302 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 73 OD1 REMARK 620 2 ASP A 75 OD1 74.9 REMARK 620 3 SER A 77 OG 79.4 81.6 REMARK 620 4 THR A 79 O 76.8 145.0 73.2 REMARK 620 5 GLU A 84 OE2 83.2 81.0 158.0 115.7 REMARK 620 6 GLU A 84 OE1 110.5 132.2 145.9 77.5 54.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 304 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 146 OD1 REMARK 620 2 ASP A 146 O 57.2 REMARK 620 3 ASP A 148 OD2 79.5 88.5 REMARK 620 4 ASP A 148 OD1 121.0 97.2 44.8 REMARK 620 5 ASP A 150 OD2 82.7 136.5 66.4 89.2 REMARK 620 6 GLU A 152 O 78.6 108.9 137.7 153.6 75.2 REMARK 620 7 GLU A 157 OE2 105.8 65.0 140.9 107.8 151.9 80.2 REMARK 620 8 HOH A 178 O 152.0 148.3 88.4 59.8 69.4 94.3 99.5 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 302 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH C 12 O REMARK 620 2 ASP C 73 OD1 133.1 REMARK 620 3 ASP C 75 OD2 62.7 70.4 REMARK 620 4 SER C 77 OG 79.2 89.6 78.8 REMARK 620 5 THR C 79 O 132.3 92.5 159.3 89.8 REMARK 620 6 GLU C 84 OE2 82.2 86.5 72.2 150.4 119.7 REMARK 620 7 GLU C 84 OE1 80.1 122.5 112.6 147.8 86.1 47.4 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 304 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH C 19 O REMARK 620 2 ASP C 146 OD1 167.2 REMARK 620 3 ASP C 148 OD1 96.9 74.2 REMARK 620 4 ASP C 150 OD1 89.6 80.6 85.3 REMARK 620 5 GLU C 152 O 111.1 74.7 146.0 76.3 REMARK 620 6 GLU C 157 OE1 101.9 90.5 118.6 151.3 75.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 37 OD1 REMARK 620 2 ASP C 39 OD2 88.7 REMARK 620 3 SER C 41 OG 81.6 93.4 REMARK 620 4 THR C 43 O 79.5 165.1 76.0 REMARK 620 5 GLU C 48 OE2 87.6 63.6 154.9 124.3 REMARK 620 6 GLU C 48 OE1 118.8 106.6 151.0 87.2 52.9 REMARK 620 7 HOH C 177 O 158.2 72.7 88.1 116.6 93.9 78.4 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 303 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 110 OD1 REMARK 620 2 ASP C 112 OD2 67.9 REMARK 620 3 THR C 114 OG1 79.3 91.8 REMARK 620 4 LYS C 116 O 85.4 153.4 82.2 REMARK 620 5 HOH C 187 O 146.5 82.6 86.2 122.6 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA C 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA C 303 DBREF 3KF9 A 20 168 UNP Q06827 CATR_SCHDU 20 168 DBREF 3KF9 B 1 22 UNP Q9H1R3 MYLK2_HUMAN 566 587 DBREF 3KF9 C 20 168 UNP Q06827 CATR_SCHDU 20 168 DBREF 3KF9 D 1 22 UNP Q9H1R3 MYLK2_HUMAN 566 587 SEQRES 1 A 149 GLY LEU THR GLU GLU GLN LYS GLN GLU ILE ARG GLU ALA SEQRES 2 A 149 PHE ASP LEU PHE ASP THR ASP GLY SER GLY THR ILE ASP SEQRES 3 A 149 ALA LYS GLU LEU LYS VAL ALA MET ARG ALA LEU GLY PHE SEQRES 4 A 149 GLU PRO LYS LYS GLU GLU ILE LYS LYS MET ILE ALA ASP SEQRES 5 A 149 ILE ASP LYS ASP GLY SER GLY THR ILE ASP PHE GLU GLU SEQRES 6 A 149 PHE LEU GLN MET MET THR ALA LYS MET GLY GLU ARG ASP SEQRES 7 A 149 SER ARG GLU GLU ILE MET LYS ALA PHE ARG LEU PHE ASP SEQRES 8 A 149 ASP ASP GLU THR GLY LYS ILE SER PHE LYS ASN LEU LYS SEQRES 9 A 149 ARG VAL ALA LYS GLU LEU GLY GLU ASN MET THR ASP GLU SEQRES 10 A 149 GLU LEU GLN GLU MET ILE ASP GLU ALA ASP ARG ASP GLY SEQRES 11 A 149 ASP GLY GLU VAL ASN GLU GLU GLU PHE PHE ARG ILE MET SEQRES 12 A 149 LYS LYS THR SER LEU PHE SEQRES 1 B 22 LYS ARG ARG TRP LYS LYS ASN PHE ILE ALA VAL SER ALA SEQRES 2 B 22 ALA ASN ARG PHE LYS LYS ILE SER SER SEQRES 1 C 149 GLY LEU THR GLU GLU GLN LYS GLN GLU ILE ARG GLU ALA SEQRES 2 C 149 PHE ASP LEU PHE ASP THR ASP GLY SER GLY THR ILE ASP SEQRES 3 C 149 ALA LYS GLU LEU LYS VAL ALA MET ARG ALA LEU GLY PHE SEQRES 4 C 149 GLU PRO LYS LYS GLU GLU ILE LYS LYS MET ILE ALA ASP SEQRES 5 C 149 ILE ASP LYS ASP GLY SER GLY THR ILE ASP PHE GLU GLU SEQRES 6 C 149 PHE LEU GLN MET MET THR ALA LYS MET GLY GLU ARG ASP SEQRES 7 C 149 SER ARG GLU GLU ILE MET LYS ALA PHE ARG LEU PHE ASP SEQRES 8 C 149 ASP ASP GLU THR GLY LYS ILE SER PHE LYS ASN LEU LYS SEQRES 9 C 149 ARG VAL ALA LYS GLU LEU GLY GLU ASN MET THR ASP GLU SEQRES 10 C 149 GLU LEU GLN GLU MET ILE ASP GLU ALA ASP ARG ASP GLY SEQRES 11 C 149 ASP GLY GLU VAL ASN GLU GLU GLU PHE PHE ARG ILE MET SEQRES 12 C 149 LYS LYS THR SER LEU PHE SEQRES 1 D 22 LYS ARG ARG TRP LYS LYS ASN PHE ILE ALA VAL SER ALA SEQRES 2 D 22 ALA ASN ARG PHE LYS LYS ILE SER SER HET CA A 301 1 HET CA A 302 1 HET CA A 304 1 HET CA A 303 1 HET CA C 302 1 HET CA C 304 1 HET CA C 301 1 HET CA C 303 1 HETNAM CA CALCIUM ION FORMUL 5 CA 8(CA 2+) FORMUL 13 HOH *69(H2 O) HELIX 1 1 THR A 22 ASP A 37 1 16 HELIX 2 2 ASP A 45 LEU A 56 1 12 HELIX 3 3 LYS A 61 ASP A 73 1 13 HELIX 4 4 PHE A 82 MET A 89 1 8 HELIX 5 5 GLY A 94 ASP A 110 1 17 HELIX 6 6 SER A 118 LEU A 129 1 12 HELIX 7 7 THR A 134 ARG A 147 1 14 HELIX 8 8 ASN A 154 MET A 162 1 9 HELIX 9 9 LYS A 164 PHE A 168 5 5 HELIX 10 10 LYS B 1 SER B 22 1 22 HELIX 11 11 THR C 22 ASP C 37 1 16 HELIX 12 12 ASP C 45 GLY C 57 1 13 HELIX 13 13 LYS C 61 ASP C 73 1 13 HELIX 14 14 PHE C 82 MET C 89 1 8 HELIX 15 15 GLY C 94 ASP C 110 1 17 HELIX 16 16 SER C 118 LEU C 129 1 12 HELIX 17 17 THR C 134 ASP C 146 1 13 HELIX 18 18 GLU C 155 MET C 162 1 8 HELIX 19 19 LYS C 164 PHE C 168 5 5 HELIX 20 20 ARG D 2 SER D 22 1 21 SHEET 1 A 2 THR A 43 ILE A 44 0 SHEET 2 A 2 ILE A 80 ASP A 81 -1 O ILE A 80 N ILE A 44 SHEET 1 B 2 THR C 43 ILE C 44 0 SHEET 2 B 2 ILE C 80 ASP C 81 -1 O ILE C 80 N ILE C 44 SHEET 1 C 2 LYS C 116 ILE C 117 0 SHEET 2 C 2 VAL C 153 ASN C 154 -1 O VAL C 153 N ILE C 117 LINK O HOH A 17 CA CA A 303 1555 1555 2.77 LINK OD1 ASP A 37 CA CA A 301 1555 1555 2.27 LINK OD1 ASP A 39 CA CA A 301 1555 1555 2.23 LINK OG SER A 41 CA CA A 301 1555 1555 2.51 LINK O THR A 43 CA CA A 301 1555 1555 2.49 LINK OE1 GLU A 48 CA CA A 301 1555 1555 2.37 LINK OE2 GLU A 48 CA CA A 301 1555 1555 2.79 LINK OD1 ASP A 73 CA CA A 302 1555 1555 2.04 LINK OD1 ASP A 75 CA CA A 302 1555 1555 2.36 LINK OG SER A 77 CA CA A 302 1555 1555 2.57 LINK O THR A 79 CA CA A 302 1555 1555 2.29 LINK OE2 GLU A 84 CA CA A 302 1555 1555 2.35 LINK OE1 GLU A 84 CA CA A 302 1555 1555 2.44 LINK OD1 ASP A 110 CA CA A 303 1555 1555 2.37 LINK OD1 ASP A 112 CA CA A 303 1555 1555 2.51 LINK OG1 THR A 114 CA CA A 303 1555 1555 2.82 LINK O LYS A 116 CA CA A 303 1555 1555 2.32 LINK OD1 ASP A 146 CA CA A 304 1555 1555 2.38 LINK O ASP A 146 CA CA A 304 1555 1555 3.18 LINK OD2 ASP A 148 CA CA A 304 1555 1555 2.83 LINK OD1 ASP A 148 CA CA A 304 1555 1555 2.94 LINK OD2 ASP A 150 CA CA A 304 1555 1555 2.21 LINK O GLU A 152 CA CA A 304 1555 1555 2.35 LINK OE2 GLU A 157 CA CA A 304 1555 1555 1.95 LINK O HOH A 178 CA CA A 304 1555 1555 2.50 LINK O HOH A 193 CA CA A 301 1555 1555 2.23 LINK O HOH C 12 CA CA C 302 1555 1555 1.95 LINK O HOH C 19 CA CA C 304 1555 1555 2.49 LINK OD1 ASP C 37 CA CA C 301 1555 1555 2.04 LINK OD2 ASP C 39 CA CA C 301 1555 1555 2.18 LINK OG SER C 41 CA CA C 301 1555 1555 1.98 LINK O THR C 43 CA CA C 301 1555 1555 2.22 LINK OE2 GLU C 48 CA CA C 301 1555 1555 2.45 LINK OE1 GLU C 48 CA CA C 301 1555 1555 2.48 LINK OD1 ASP C 73 CA CA C 302 1555 1555 2.27 LINK OD2 ASP C 75 CA CA C 302 1555 1555 2.43 LINK OG SER C 77 CA CA C 302 1555 1555 2.55 LINK O THR C 79 CA CA C 302 1555 1555 2.42 LINK OE2 GLU C 84 CA CA C 302 1555 1555 2.62 LINK OE1 GLU C 84 CA CA C 302 1555 1555 2.81 LINK OD1 ASP C 110 CA CA C 303 1555 1555 2.38 LINK OD2 ASP C 112 CA CA C 303 1555 1555 2.61 LINK OG1 THR C 114 CA CA C 303 1555 1555 2.70 LINK O LYS C 116 CA CA C 303 1555 1555 2.17 LINK OD1 ASP C 146 CA CA C 304 1555 1555 2.57 LINK OD1 ASP C 148 CA CA C 304 1555 1555 2.35 LINK OD1 ASP C 150 CA CA C 304 1555 1555 2.36 LINK O GLU C 152 CA CA C 304 1555 1555 2.55 LINK OE1 GLU C 157 CA CA C 304 1555 1555 2.14 LINK O HOH C 177 CA CA C 301 1555 1555 2.60 LINK O HOH C 187 CA CA C 303 1555 1555 2.45 SITE 1 AC1 6 ASP A 37 ASP A 39 SER A 41 THR A 43 SITE 2 AC1 6 GLU A 48 HOH A 193 SITE 1 AC2 6 ASP A 73 ASP A 75 SER A 77 THR A 79 SITE 2 AC2 6 ASP A 81 GLU A 84 SITE 1 AC3 6 ASP A 146 ASP A 148 ASP A 150 GLU A 152 SITE 2 AC3 6 GLU A 157 HOH A 178 SITE 1 AC4 6 HOH A 17 ASP A 110 ASP A 112 THR A 114 SITE 2 AC4 6 LYS A 116 ASN A 121 SITE 1 AC5 6 HOH C 12 ASP C 73 ASP C 75 SER C 77 SITE 2 AC5 6 THR C 79 GLU C 84 SITE 1 AC6 6 HOH C 19 ASP C 146 ASP C 148 ASP C 150 SITE 2 AC6 6 GLU C 152 GLU C 157 SITE 1 AC7 6 ASP C 37 ASP C 39 SER C 41 THR C 43 SITE 2 AC7 6 GLU C 48 HOH C 177 SITE 1 AC8 6 ASP C 110 ASP C 112 THR C 114 LYS C 116 SITE 2 AC8 6 ASN C 121 HOH C 187 CRYST1 40.750 67.750 129.530 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024540 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014760 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007720 0.00000