data_3KFO # _entry.id 3KFO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.338 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3KFO RCSB RCSB055933 WWPDB D_1000055933 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id NYSGXRC-15133a _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3KFO _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-10-27 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Sampathkumar, P.' 1 ? 'Bonanno, J.B.' 2 ? 'Miller, S.' 3 ? 'Bain, K.' 4 ? 'Dickey, M.' 5 ? 'Gheyi, T.' 6 ? 'Almo, S.C.' 7 ? 'Rout, M.' 8 ? 'Sali, A.' 9 ? 'Phillips, J.' 10 ? 'Pieper, U.' 11 ? 'Fernandez-Martinez, J.' 12 ? 'Franke, J.D.' 13 ? 'Atwell, S.' 14 ? 'Thompson, D.A.' 15 ? 'Emtage, J.S.' 16 ? 'Wasserman, S.' 17 ? 'Sauder, J.M.' 18 0000-0002-0254-4955 'Burley, S.K.' 19 0000-0002-2487-9713 'New York SGX Research Center for Structural Genomics (NYSGXRC)' 20 ? # _citation.id primary _citation.title 'Structure of the C-terminal domain of Saccharomyces cerevisiae Nup133, a component of the nuclear pore complex.' _citation.journal_abbrev Proteins _citation.journal_volume 79 _citation.page_first 1672 _citation.page_last 1677 _citation.year 2011 _citation.journal_id_ASTM PSFGEY _citation.country US _citation.journal_id_ISSN 0887-3585 _citation.journal_id_CSD 0867 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21365675 _citation.pdbx_database_id_DOI 10.1002/prot.22973 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sampathkumar, P.' 1 ? primary 'Gheyi, T.' 2 ? primary 'Miller, S.A.' 3 ? primary 'Bain, K.T.' 4 ? primary 'Dickey, M.' 5 ? primary 'Bonanno, J.B.' 6 ? primary 'Kim, S.J.' 7 ? primary 'Phillips, J.' 8 ? primary 'Pieper, U.' 9 ? primary 'Fernandez-Martinez, J.' 10 ? primary 'Franke, J.D.' 11 ? primary 'Martel, A.' 12 ? primary 'Tsuruta, H.' 13 ? primary 'Atwell, S.' 14 ? primary 'Thompson, D.A.' 15 ? primary 'Emtage, J.S.' 16 ? primary 'Wasserman, S.R.' 17 ? primary 'Rout, M.P.' 18 ? primary 'Sali, A.' 19 ? primary 'Sauder, J.M.' 20 ? primary 'Burley, S.K.' 21 0000-0002-2487-9713 # _cell.length_a 47.433 _cell.length_b 52.678 _cell.length_c 76.674 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3KFO _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 3KFO _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 19 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Nucleoporin NUP133' 33243.129 1 ? ? 'C-terminal domain, residues 881-1157' ? 2 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 3 water nat water 18.015 100 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Nuclear pore protein NUP133' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)SLKYGHVAWIQQILDGSYADA(MSE)NTLKNITVDDSKKGESLSECELHLNVAKLSSLLVEKDNLDINTLRKIQY NLDTIDAEKNISNKLKKGEVQICKRFKNGSIREVFNILVEELKSTTVVNLSDLVELYS(MSE)LDDEESLFIPLRLLSVD GNLLNFEVKKFLNALVWRRIVLLNASNEGDKLLQHIVKRVFDEELPKNNDFPLPSVDLLCDKSLLTPEYISETYGRFPID QNAIREEIYEEISQVETLNSDNSLEIKLHSTIGSVAKEKNYTINYETNTVEYEGHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MSLKYGHVAWIQQILDGSYADAMNTLKNITVDDSKKGESLSECELHLNVAKLSSLLVEKDNLDINTLRKIQYNLDTIDAE KNISNKLKKGEVQICKRFKNGSIREVFNILVEELKSTTVVNLSDLVELYSMLDDEESLFIPLRLLSVDGNLLNFEVKKFL NALVWRRIVLLNASNEGDKLLQHIVKRVFDEELPKNNDFPLPSVDLLCDKSLLTPEYISETYGRFPIDQNAIREEIYEEI SQVETLNSDNSLEIKLHSTIGSVAKEKNYTINYETNTVEYEGHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier NYSGXRC-15133a # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 SER n 1 3 LEU n 1 4 LYS n 1 5 TYR n 1 6 GLY n 1 7 HIS n 1 8 VAL n 1 9 ALA n 1 10 TRP n 1 11 ILE n 1 12 GLN n 1 13 GLN n 1 14 ILE n 1 15 LEU n 1 16 ASP n 1 17 GLY n 1 18 SER n 1 19 TYR n 1 20 ALA n 1 21 ASP n 1 22 ALA n 1 23 MSE n 1 24 ASN n 1 25 THR n 1 26 LEU n 1 27 LYS n 1 28 ASN n 1 29 ILE n 1 30 THR n 1 31 VAL n 1 32 ASP n 1 33 ASP n 1 34 SER n 1 35 LYS n 1 36 LYS n 1 37 GLY n 1 38 GLU n 1 39 SER n 1 40 LEU n 1 41 SER n 1 42 GLU n 1 43 CYS n 1 44 GLU n 1 45 LEU n 1 46 HIS n 1 47 LEU n 1 48 ASN n 1 49 VAL n 1 50 ALA n 1 51 LYS n 1 52 LEU n 1 53 SER n 1 54 SER n 1 55 LEU n 1 56 LEU n 1 57 VAL n 1 58 GLU n 1 59 LYS n 1 60 ASP n 1 61 ASN n 1 62 LEU n 1 63 ASP n 1 64 ILE n 1 65 ASN n 1 66 THR n 1 67 LEU n 1 68 ARG n 1 69 LYS n 1 70 ILE n 1 71 GLN n 1 72 TYR n 1 73 ASN n 1 74 LEU n 1 75 ASP n 1 76 THR n 1 77 ILE n 1 78 ASP n 1 79 ALA n 1 80 GLU n 1 81 LYS n 1 82 ASN n 1 83 ILE n 1 84 SER n 1 85 ASN n 1 86 LYS n 1 87 LEU n 1 88 LYS n 1 89 LYS n 1 90 GLY n 1 91 GLU n 1 92 VAL n 1 93 GLN n 1 94 ILE n 1 95 CYS n 1 96 LYS n 1 97 ARG n 1 98 PHE n 1 99 LYS n 1 100 ASN n 1 101 GLY n 1 102 SER n 1 103 ILE n 1 104 ARG n 1 105 GLU n 1 106 VAL n 1 107 PHE n 1 108 ASN n 1 109 ILE n 1 110 LEU n 1 111 VAL n 1 112 GLU n 1 113 GLU n 1 114 LEU n 1 115 LYS n 1 116 SER n 1 117 THR n 1 118 THR n 1 119 VAL n 1 120 VAL n 1 121 ASN n 1 122 LEU n 1 123 SER n 1 124 ASP n 1 125 LEU n 1 126 VAL n 1 127 GLU n 1 128 LEU n 1 129 TYR n 1 130 SER n 1 131 MSE n 1 132 LEU n 1 133 ASP n 1 134 ASP n 1 135 GLU n 1 136 GLU n 1 137 SER n 1 138 LEU n 1 139 PHE n 1 140 ILE n 1 141 PRO n 1 142 LEU n 1 143 ARG n 1 144 LEU n 1 145 LEU n 1 146 SER n 1 147 VAL n 1 148 ASP n 1 149 GLY n 1 150 ASN n 1 151 LEU n 1 152 LEU n 1 153 ASN n 1 154 PHE n 1 155 GLU n 1 156 VAL n 1 157 LYS n 1 158 LYS n 1 159 PHE n 1 160 LEU n 1 161 ASN n 1 162 ALA n 1 163 LEU n 1 164 VAL n 1 165 TRP n 1 166 ARG n 1 167 ARG n 1 168 ILE n 1 169 VAL n 1 170 LEU n 1 171 LEU n 1 172 ASN n 1 173 ALA n 1 174 SER n 1 175 ASN n 1 176 GLU n 1 177 GLY n 1 178 ASP n 1 179 LYS n 1 180 LEU n 1 181 LEU n 1 182 GLN n 1 183 HIS n 1 184 ILE n 1 185 VAL n 1 186 LYS n 1 187 ARG n 1 188 VAL n 1 189 PHE n 1 190 ASP n 1 191 GLU n 1 192 GLU n 1 193 LEU n 1 194 PRO n 1 195 LYS n 1 196 ASN n 1 197 ASN n 1 198 ASP n 1 199 PHE n 1 200 PRO n 1 201 LEU n 1 202 PRO n 1 203 SER n 1 204 VAL n 1 205 ASP n 1 206 LEU n 1 207 LEU n 1 208 CYS n 1 209 ASP n 1 210 LYS n 1 211 SER n 1 212 LEU n 1 213 LEU n 1 214 THR n 1 215 PRO n 1 216 GLU n 1 217 TYR n 1 218 ILE n 1 219 SER n 1 220 GLU n 1 221 THR n 1 222 TYR n 1 223 GLY n 1 224 ARG n 1 225 PHE n 1 226 PRO n 1 227 ILE n 1 228 ASP n 1 229 GLN n 1 230 ASN n 1 231 ALA n 1 232 ILE n 1 233 ARG n 1 234 GLU n 1 235 GLU n 1 236 ILE n 1 237 TYR n 1 238 GLU n 1 239 GLU n 1 240 ILE n 1 241 SER n 1 242 GLN n 1 243 VAL n 1 244 GLU n 1 245 THR n 1 246 LEU n 1 247 ASN n 1 248 SER n 1 249 ASP n 1 250 ASN n 1 251 SER n 1 252 LEU n 1 253 GLU n 1 254 ILE n 1 255 LYS n 1 256 LEU n 1 257 HIS n 1 258 SER n 1 259 THR n 1 260 ILE n 1 261 GLY n 1 262 SER n 1 263 VAL n 1 264 ALA n 1 265 LYS n 1 266 GLU n 1 267 LYS n 1 268 ASN n 1 269 TYR n 1 270 THR n 1 271 ILE n 1 272 ASN n 1 273 TYR n 1 274 GLU n 1 275 THR n 1 276 ASN n 1 277 THR n 1 278 VAL n 1 279 GLU n 1 280 TYR n 1 281 GLU n 1 282 GLY n 1 283 HIS n 1 284 HIS n 1 285 HIS n 1 286 HIS n 1 287 HIS n 1 288 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ;brewer's yeast,lager beer yeast,yeast ; _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'NUP133, RAT3, YKR082W, YKR402' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 4932 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)-Codon+RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'BC-pSGX3(BC); modified pET26b' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NU133_YEAST _struct_ref.pdbx_db_accession P36161 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KYGHVAWIQQILDGSYADAMNTLKNITVDDSKKGESLSECELHLNVAKLSSLLVEKDNLDINTLRKIQYNLDTIDAEKNI SNKLKKGEVQICKRFKNGSIREVFNILVEELKSTTVVNLSDLVELYSMLDDEESLFIPLRLLSVDGNLLNFEVKKFLNAL VWRRIVLLNASNEGDKLLQHIVKRVFDEELPKNNDFPLPSVDLLCDKSLLTPEYISETYGRFPIDQNAIREEIYEEISQV ETLNSDNSLEIKLHSTIGSVAKEKNYTINYETNTVEY ; _struct_ref.pdbx_align_begin 881 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3KFO _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 280 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P36161 _struct_ref_seq.db_align_beg 881 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1157 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 881 _struct_ref_seq.pdbx_auth_seq_align_end 1157 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3KFO MSE A 1 ? UNP P36161 ? ? 'expression tag' 878 1 1 3KFO SER A 2 ? UNP P36161 ? ? 'expression tag' 879 2 1 3KFO LEU A 3 ? UNP P36161 ? ? 'expression tag' 880 3 1 3KFO GLU A 281 ? UNP P36161 ? ? 'expression tag' 1158 4 1 3KFO GLY A 282 ? UNP P36161 ? ? 'expression tag' 1159 5 1 3KFO HIS A 283 ? UNP P36161 ? ? 'expression tag' 1160 6 1 3KFO HIS A 284 ? UNP P36161 ? ? 'expression tag' 1161 7 1 3KFO HIS A 285 ? UNP P36161 ? ? 'expression tag' 1162 8 1 3KFO HIS A 286 ? UNP P36161 ? ? 'expression tag' 1163 9 1 3KFO HIS A 287 ? UNP P36161 ? ? 'expression tag' 1164 10 1 3KFO HIS A 288 ? UNP P36161 ? ? 'expression tag' 1165 11 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3KFO _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews ? _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH ? _exptl_crystal_grow.temp 294 _exptl_crystal_grow.pdbx_details '20% PEG 3350, 200mM Potassium Thiocyanate, VAPOR DIFFUSION, SITTING DROP, temperature 294K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RAYONIX MX225HE' _diffrn_detector.pdbx_collection_date 2009-07-31 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator diamond _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97929 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 31-ID' _diffrn_source.pdbx_wavelength_list 0.97929 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 31-ID # _reflns.entry_id 3KFO _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 1.90 _reflns.d_resolution_low 31.0 _reflns.number_all ? _reflns.number_obs 15683 _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.121 _reflns.pdbx_netI_over_sigmaI 10.6 _reflns.B_iso_Wilson_estimate 19.5 _reflns.pdbx_redundancy 7.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_Rrim_I_all ? # _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 2.00 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_obs 4.6 _reflns_shell.pdbx_Rsym_value 0.414 _reflns_shell.pdbx_redundancy 7.8 _reflns_shell.number_unique_all 2236 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_Rrim_I_all ? # _refine.entry_id 3KFO _refine.ls_d_res_high 1.900 _refine.ls_d_res_low 23.000 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.670 _refine.ls_number_reflns_obs 15628 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.193 _refine.ls_R_factor_R_work 0.191 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.245 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.200 _refine.ls_number_reflns_R_free 811 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 23.975 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.010 _refine.aniso_B[2][2] -0.020 _refine.aniso_B[3][3] 0.010 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.943 _refine.correlation_coeff_Fo_to_Fc_free 0.921 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.180 _refine.pdbx_overall_ESU_R_Free 0.165 _refine.overall_SU_ML 0.106 _refine.overall_SU_B 3.489 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 52.49 _refine.B_iso_min 6.67 _refine.occupancy_max 1.00 _refine.occupancy_min 0.50 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1669 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 100 _refine_hist.number_atoms_total 1775 _refine_hist.d_res_high 1.900 _refine_hist.d_res_low 23.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1731 0.018 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1135 0.008 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2360 1.635 1.980 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 2802 1.001 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 224 5.340 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 82 32.694 25.610 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 307 13.929 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 9 13.775 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 284 0.099 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1931 0.007 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 325 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 454 0.226 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 1207 0.193 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 920 0.187 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 889 0.092 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 91 0.164 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 7 0.280 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 26 0.183 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 7 0.149 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1111 1.282 1.500 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 431 0.300 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1759 1.991 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 689 3.172 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 595 4.728 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.900 _refine_ls_shell.d_res_low 1.949 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 100.000 _refine_ls_shell.number_reflns_R_work 1041 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.201 _refine_ls_shell.R_factor_R_free 0.299 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 66 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1107 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_obs ? # _struct.entry_id 3KFO _struct.title 'Crystal structure of the C-terminal domain from the nuclear pore complex component NUP133 from Saccharomyces cerevisiae' _struct.pdbx_descriptor 'Nucleoporin NUP133' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3KFO _struct_keywords.text ;Nuclear pore complex, NUP133, yeast, proteolysis, STRUCTURAL GENOMICS, PSI2, PROTEIN STRUCTURE INITIATIVE, NEW YORK STRUCTURAL GENOMIX RESEARCH CONSORTIUM, NYSGXRC, Membrane, mRNA transport, Nucleus, Phosphoprotein, Protein transport, Translocation, Transport, New York SGX Research Center for Structural Genomics ; _struct_keywords.pdbx_keywords 'PROTEIN TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 73 ? LYS A 89 ? ASN A 950 LYS A 966 1 ? 17 HELX_P HELX_P2 2 CYS A 95 ? LYS A 99 ? CYS A 972 LYS A 976 5 ? 5 HELX_P HELX_P3 3 ASN A 100 ? SER A 116 ? ASN A 977 SER A 993 1 ? 17 HELX_P HELX_P4 4 ASN A 121 ? SER A 130 ? ASN A 998 SER A 1007 1 ? 10 HELX_P HELX_P5 5 ASP A 134 ? GLY A 149 ? ASP A 1011 GLY A 1026 1 ? 16 HELX_P HELX_P6 6 ASN A 150 ? LEU A 152 ? ASN A 1027 LEU A 1029 5 ? 3 HELX_P HELX_P7 7 ASN A 153 ? ALA A 173 ? ASN A 1030 ALA A 1050 1 ? 21 HELX_P HELX_P8 8 ASP A 178 ? GLU A 191 ? ASP A 1055 GLU A 1068 1 ? 14 HELX_P HELX_P9 9 GLU A 192 ? ASN A 197 ? GLU A 1069 ASN A 1074 1 ? 6 HELX_P HELX_P10 10 SER A 203 ? CYS A 208 ? SER A 1080 CYS A 1085 1 ? 6 HELX_P HELX_P11 11 ASP A 209 ? LEU A 213 ? ASP A 1086 LEU A 1090 5 ? 5 HELX_P HELX_P12 12 THR A 214 ? GLY A 223 ? THR A 1091 GLY A 1100 1 ? 10 HELX_P HELX_P13 13 ASP A 228 ? ASN A 247 ? ASP A 1105 ASN A 1124 1 ? 20 HELX_P HELX_P14 14 ASN A 250 ? LYS A 265 ? ASN A 1127 LYS A 1142 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A SER 130 C ? ? ? 1_555 A MSE 131 N ? ? A SER 1007 A MSE 1008 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale2 covale both ? A MSE 131 C ? ? ? 1_555 A LEU 132 N ? ? A MSE 1008 A LEU 1009 1_555 ? ? ? ? ? ? ? 1.327 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 199 ? PRO A 200 ? PHE A 1076 PRO A 1077 A 2 THR A 277 ? TYR A 280 ? THR A 1154 TYR A 1157 A 3 TYR A 269 ? ASN A 272 ? TYR A 1146 ASN A 1149 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE A 199 ? N PHE A 1076 O VAL A 278 ? O VAL A 1155 A 2 3 O THR A 277 ? O THR A 1154 N ASN A 272 ? N ASN A 1149 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id GOL _struct_site.pdbx_auth_seq_id 1 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 3 _struct_site.details 'BINDING SITE FOR RESIDUE GOL A 1' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 PHE A 154 ? PHE A 1031 . ? 1_555 ? 2 AC1 3 LYS A 158 ? LYS A 1035 . ? 1_555 ? 3 AC1 3 PRO A 200 ? PRO A 1077 . ? 1_555 ? # _atom_sites.entry_id 3KFO _atom_sites.fract_transf_matrix[1][1] 0.021082 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018983 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013042 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 878 ? ? ? A . n A 1 2 SER 2 879 ? ? ? A . n A 1 3 LEU 3 880 ? ? ? A . n A 1 4 LYS 4 881 ? ? ? A . n A 1 5 TYR 5 882 ? ? ? A . n A 1 6 GLY 6 883 ? ? ? A . n A 1 7 HIS 7 884 ? ? ? A . n A 1 8 VAL 8 885 ? ? ? A . n A 1 9 ALA 9 886 ? ? ? A . n A 1 10 TRP 10 887 ? ? ? A . n A 1 11 ILE 11 888 ? ? ? A . n A 1 12 GLN 12 889 ? ? ? A . n A 1 13 GLN 13 890 ? ? ? A . n A 1 14 ILE 14 891 ? ? ? A . n A 1 15 LEU 15 892 ? ? ? A . n A 1 16 ASP 16 893 ? ? ? A . n A 1 17 GLY 17 894 ? ? ? A . n A 1 18 SER 18 895 ? ? ? A . n A 1 19 TYR 19 896 ? ? ? A . n A 1 20 ALA 20 897 ? ? ? A . n A 1 21 ASP 21 898 ? ? ? A . n A 1 22 ALA 22 899 ? ? ? A . n A 1 23 MSE 23 900 ? ? ? A . n A 1 24 ASN 24 901 ? ? ? A . n A 1 25 THR 25 902 ? ? ? A . n A 1 26 LEU 26 903 ? ? ? A . n A 1 27 LYS 27 904 ? ? ? A . n A 1 28 ASN 28 905 ? ? ? A . n A 1 29 ILE 29 906 ? ? ? A . n A 1 30 THR 30 907 ? ? ? A . n A 1 31 VAL 31 908 ? ? ? A . n A 1 32 ASP 32 909 ? ? ? A . n A 1 33 ASP 33 910 ? ? ? A . n A 1 34 SER 34 911 ? ? ? A . n A 1 35 LYS 35 912 ? ? ? A . n A 1 36 LYS 36 913 ? ? ? A . n A 1 37 GLY 37 914 ? ? ? A . n A 1 38 GLU 38 915 ? ? ? A . n A 1 39 SER 39 916 ? ? ? A . n A 1 40 LEU 40 917 ? ? ? A . n A 1 41 SER 41 918 ? ? ? A . n A 1 42 GLU 42 919 ? ? ? A . n A 1 43 CYS 43 920 ? ? ? A . n A 1 44 GLU 44 921 ? ? ? A . n A 1 45 LEU 45 922 ? ? ? A . n A 1 46 HIS 46 923 ? ? ? A . n A 1 47 LEU 47 924 ? ? ? A . n A 1 48 ASN 48 925 ? ? ? A . n A 1 49 VAL 49 926 ? ? ? A . n A 1 50 ALA 50 927 ? ? ? A . n A 1 51 LYS 51 928 ? ? ? A . n A 1 52 LEU 52 929 ? ? ? A . n A 1 53 SER 53 930 ? ? ? A . n A 1 54 SER 54 931 ? ? ? A . n A 1 55 LEU 55 932 ? ? ? A . n A 1 56 LEU 56 933 ? ? ? A . n A 1 57 VAL 57 934 ? ? ? A . n A 1 58 GLU 58 935 ? ? ? A . n A 1 59 LYS 59 936 ? ? ? A . n A 1 60 ASP 60 937 ? ? ? A . n A 1 61 ASN 61 938 ? ? ? A . n A 1 62 LEU 62 939 ? ? ? A . n A 1 63 ASP 63 940 ? ? ? A . n A 1 64 ILE 64 941 ? ? ? A . n A 1 65 ASN 65 942 ? ? ? A . n A 1 66 THR 66 943 ? ? ? A . n A 1 67 LEU 67 944 ? ? ? A . n A 1 68 ARG 68 945 ? ? ? A . n A 1 69 LYS 69 946 946 LYS LYS A . n A 1 70 ILE 70 947 947 ILE ILE A . n A 1 71 GLN 71 948 948 GLN GLN A . n A 1 72 TYR 72 949 949 TYR TYR A . n A 1 73 ASN 73 950 950 ASN ASN A . n A 1 74 LEU 74 951 951 LEU LEU A . n A 1 75 ASP 75 952 952 ASP ASP A . n A 1 76 THR 76 953 953 THR THR A . n A 1 77 ILE 77 954 954 ILE ILE A . n A 1 78 ASP 78 955 955 ASP ASP A . n A 1 79 ALA 79 956 956 ALA ALA A . n A 1 80 GLU 80 957 957 GLU GLU A . n A 1 81 LYS 81 958 958 LYS LYS A . n A 1 82 ASN 82 959 959 ASN ASN A . n A 1 83 ILE 83 960 960 ILE ILE A . n A 1 84 SER 84 961 961 SER SER A . n A 1 85 ASN 85 962 962 ASN ASN A . n A 1 86 LYS 86 963 963 LYS LYS A . n A 1 87 LEU 87 964 964 LEU LEU A . n A 1 88 LYS 88 965 965 LYS LYS A . n A 1 89 LYS 89 966 966 LYS LYS A . n A 1 90 GLY 90 967 967 GLY GLY A . n A 1 91 GLU 91 968 968 GLU GLU A . n A 1 92 VAL 92 969 969 VAL VAL A . n A 1 93 GLN 93 970 970 GLN GLN A . n A 1 94 ILE 94 971 971 ILE ILE A . n A 1 95 CYS 95 972 972 CYS CYS A . n A 1 96 LYS 96 973 973 LYS LYS A . n A 1 97 ARG 97 974 974 ARG ARG A . n A 1 98 PHE 98 975 975 PHE PHE A . n A 1 99 LYS 99 976 976 LYS LYS A . n A 1 100 ASN 100 977 977 ASN ASN A . n A 1 101 GLY 101 978 978 GLY GLY A . n A 1 102 SER 102 979 979 SER SER A . n A 1 103 ILE 103 980 980 ILE ILE A . n A 1 104 ARG 104 981 981 ARG ARG A . n A 1 105 GLU 105 982 982 GLU GLU A . n A 1 106 VAL 106 983 983 VAL VAL A . n A 1 107 PHE 107 984 984 PHE PHE A . n A 1 108 ASN 108 985 985 ASN ASN A . n A 1 109 ILE 109 986 986 ILE ILE A . n A 1 110 LEU 110 987 987 LEU LEU A . n A 1 111 VAL 111 988 988 VAL VAL A . n A 1 112 GLU 112 989 989 GLU GLU A . n A 1 113 GLU 113 990 990 GLU GLU A . n A 1 114 LEU 114 991 991 LEU LEU A . n A 1 115 LYS 115 992 992 LYS LYS A . n A 1 116 SER 116 993 993 SER SER A . n A 1 117 THR 117 994 994 THR THR A . n A 1 118 THR 118 995 995 THR THR A . n A 1 119 VAL 119 996 996 VAL VAL A . n A 1 120 VAL 120 997 997 VAL VAL A . n A 1 121 ASN 121 998 998 ASN ASN A . n A 1 122 LEU 122 999 999 LEU LEU A . n A 1 123 SER 123 1000 1000 SER SER A . n A 1 124 ASP 124 1001 1001 ASP ASP A . n A 1 125 LEU 125 1002 1002 LEU LEU A . n A 1 126 VAL 126 1003 1003 VAL VAL A . n A 1 127 GLU 127 1004 1004 GLU GLU A . n A 1 128 LEU 128 1005 1005 LEU LEU A . n A 1 129 TYR 129 1006 1006 TYR TYR A . n A 1 130 SER 130 1007 1007 SER SER A . n A 1 131 MSE 131 1008 1008 MSE MSE A . n A 1 132 LEU 132 1009 1009 LEU LEU A . n A 1 133 ASP 133 1010 1010 ASP ASP A . n A 1 134 ASP 134 1011 1011 ASP ASP A . n A 1 135 GLU 135 1012 1012 GLU GLU A . n A 1 136 GLU 136 1013 1013 GLU GLU A . n A 1 137 SER 137 1014 1014 SER SER A . n A 1 138 LEU 138 1015 1015 LEU LEU A . n A 1 139 PHE 139 1016 1016 PHE PHE A . n A 1 140 ILE 140 1017 1017 ILE ILE A . n A 1 141 PRO 141 1018 1018 PRO PRO A . n A 1 142 LEU 142 1019 1019 LEU LEU A . n A 1 143 ARG 143 1020 1020 ARG ARG A . n A 1 144 LEU 144 1021 1021 LEU LEU A . n A 1 145 LEU 145 1022 1022 LEU LEU A . n A 1 146 SER 146 1023 1023 SER SER A . n A 1 147 VAL 147 1024 1024 VAL VAL A . n A 1 148 ASP 148 1025 1025 ASP ASP A . n A 1 149 GLY 149 1026 1026 GLY GLY A . n A 1 150 ASN 150 1027 1027 ASN ASN A . n A 1 151 LEU 151 1028 1028 LEU LEU A . n A 1 152 LEU 152 1029 1029 LEU LEU A . n A 1 153 ASN 153 1030 1030 ASN ASN A . n A 1 154 PHE 154 1031 1031 PHE PHE A . n A 1 155 GLU 155 1032 1032 GLU GLU A . n A 1 156 VAL 156 1033 1033 VAL VAL A . n A 1 157 LYS 157 1034 1034 LYS LYS A . n A 1 158 LYS 158 1035 1035 LYS LYS A . n A 1 159 PHE 159 1036 1036 PHE PHE A . n A 1 160 LEU 160 1037 1037 LEU LEU A . n A 1 161 ASN 161 1038 1038 ASN ASN A . n A 1 162 ALA 162 1039 1039 ALA ALA A . n A 1 163 LEU 163 1040 1040 LEU LEU A . n A 1 164 VAL 164 1041 1041 VAL VAL A . n A 1 165 TRP 165 1042 1042 TRP TRP A . n A 1 166 ARG 166 1043 1043 ARG ARG A . n A 1 167 ARG 167 1044 1044 ARG ARG A . n A 1 168 ILE 168 1045 1045 ILE ILE A . n A 1 169 VAL 169 1046 1046 VAL VAL A . n A 1 170 LEU 170 1047 1047 LEU LEU A . n A 1 171 LEU 171 1048 1048 LEU LEU A . n A 1 172 ASN 172 1049 1049 ASN ASN A . n A 1 173 ALA 173 1050 1050 ALA ALA A . n A 1 174 SER 174 1051 1051 SER SER A . n A 1 175 ASN 175 1052 1052 ASN ASN A . n A 1 176 GLU 176 1053 1053 GLU GLU A . n A 1 177 GLY 177 1054 1054 GLY GLY A . n A 1 178 ASP 178 1055 1055 ASP ASP A . n A 1 179 LYS 179 1056 1056 LYS LYS A . n A 1 180 LEU 180 1057 1057 LEU LEU A . n A 1 181 LEU 181 1058 1058 LEU LEU A . n A 1 182 GLN 182 1059 1059 GLN GLN A . n A 1 183 HIS 183 1060 1060 HIS HIS A . n A 1 184 ILE 184 1061 1061 ILE ILE A . n A 1 185 VAL 185 1062 1062 VAL VAL A . n A 1 186 LYS 186 1063 1063 LYS LYS A . n A 1 187 ARG 187 1064 1064 ARG ARG A . n A 1 188 VAL 188 1065 1065 VAL VAL A . n A 1 189 PHE 189 1066 1066 PHE PHE A . n A 1 190 ASP 190 1067 1067 ASP ASP A . n A 1 191 GLU 191 1068 1068 GLU GLU A . n A 1 192 GLU 192 1069 1069 GLU GLU A . n A 1 193 LEU 193 1070 1070 LEU LEU A . n A 1 194 PRO 194 1071 1071 PRO PRO A . n A 1 195 LYS 195 1072 1072 LYS LYS A . n A 1 196 ASN 196 1073 1073 ASN ASN A . n A 1 197 ASN 197 1074 1074 ASN ASN A . n A 1 198 ASP 198 1075 1075 ASP ASP A . n A 1 199 PHE 199 1076 1076 PHE PHE A . n A 1 200 PRO 200 1077 1077 PRO PRO A . n A 1 201 LEU 201 1078 1078 LEU LEU A . n A 1 202 PRO 202 1079 1079 PRO PRO A . n A 1 203 SER 203 1080 1080 SER SER A . n A 1 204 VAL 204 1081 1081 VAL VAL A . n A 1 205 ASP 205 1082 1082 ASP ASP A . n A 1 206 LEU 206 1083 1083 LEU LEU A . n A 1 207 LEU 207 1084 1084 LEU LEU A . n A 1 208 CYS 208 1085 1085 CYS CYS A . n A 1 209 ASP 209 1086 1086 ASP ASP A . n A 1 210 LYS 210 1087 1087 LYS LYS A . n A 1 211 SER 211 1088 1088 SER SER A . n A 1 212 LEU 212 1089 1089 LEU LEU A . n A 1 213 LEU 213 1090 1090 LEU LEU A . n A 1 214 THR 214 1091 1091 THR THR A . n A 1 215 PRO 215 1092 1092 PRO PRO A . n A 1 216 GLU 216 1093 1093 GLU GLU A . n A 1 217 TYR 217 1094 1094 TYR TYR A . n A 1 218 ILE 218 1095 1095 ILE ILE A . n A 1 219 SER 219 1096 1096 SER SER A . n A 1 220 GLU 220 1097 1097 GLU GLU A . n A 1 221 THR 221 1098 1098 THR THR A . n A 1 222 TYR 222 1099 1099 TYR TYR A . n A 1 223 GLY 223 1100 1100 GLY GLY A . n A 1 224 ARG 224 1101 1101 ARG ARG A . n A 1 225 PHE 225 1102 1102 PHE PHE A . n A 1 226 PRO 226 1103 1103 PRO PRO A . n A 1 227 ILE 227 1104 1104 ILE ILE A . n A 1 228 ASP 228 1105 1105 ASP ASP A . n A 1 229 GLN 229 1106 1106 GLN GLN A . n A 1 230 ASN 230 1107 1107 ASN ASN A . n A 1 231 ALA 231 1108 1108 ALA ALA A . n A 1 232 ILE 232 1109 1109 ILE ILE A . n A 1 233 ARG 233 1110 1110 ARG ARG A . n A 1 234 GLU 234 1111 1111 GLU GLU A . n A 1 235 GLU 235 1112 1112 GLU GLU A . n A 1 236 ILE 236 1113 1113 ILE ILE A . n A 1 237 TYR 237 1114 1114 TYR TYR A . n A 1 238 GLU 238 1115 1115 GLU GLU A . n A 1 239 GLU 239 1116 1116 GLU GLU A . n A 1 240 ILE 240 1117 1117 ILE ILE A . n A 1 241 SER 241 1118 1118 SER SER A . n A 1 242 GLN 242 1119 1119 GLN GLN A . n A 1 243 VAL 243 1120 1120 VAL VAL A . n A 1 244 GLU 244 1121 1121 GLU GLU A . n A 1 245 THR 245 1122 1122 THR THR A . n A 1 246 LEU 246 1123 1123 LEU LEU A . n A 1 247 ASN 247 1124 1124 ASN ASN A . n A 1 248 SER 248 1125 1125 SER SER A . n A 1 249 ASP 249 1126 1126 ASP ASP A . n A 1 250 ASN 250 1127 1127 ASN ASN A . n A 1 251 SER 251 1128 1128 SER SER A . n A 1 252 LEU 252 1129 1129 LEU LEU A . n A 1 253 GLU 253 1130 1130 GLU GLU A . n A 1 254 ILE 254 1131 1131 ILE ILE A . n A 1 255 LYS 255 1132 1132 LYS LYS A . n A 1 256 LEU 256 1133 1133 LEU LEU A . n A 1 257 HIS 257 1134 1134 HIS HIS A . n A 1 258 SER 258 1135 1135 SER SER A . n A 1 259 THR 259 1136 1136 THR THR A . n A 1 260 ILE 260 1137 1137 ILE ILE A . n A 1 261 GLY 261 1138 1138 GLY GLY A . n A 1 262 SER 262 1139 1139 SER SER A . n A 1 263 VAL 263 1140 1140 VAL VAL A . n A 1 264 ALA 264 1141 1141 ALA ALA A . n A 1 265 LYS 265 1142 1142 LYS LYS A . n A 1 266 GLU 266 1143 1143 GLU GLU A . n A 1 267 LYS 267 1144 1144 LYS LYS A . n A 1 268 ASN 268 1145 1145 ASN ASN A . n A 1 269 TYR 269 1146 1146 TYR TYR A . n A 1 270 THR 270 1147 1147 THR THR A . n A 1 271 ILE 271 1148 1148 ILE ILE A . n A 1 272 ASN 272 1149 1149 ASN ASN A . n A 1 273 TYR 273 1150 1150 TYR TYR A . n A 1 274 GLU 274 1151 1151 GLU GLU A . n A 1 275 THR 275 1152 1152 THR THR A . n A 1 276 ASN 276 1153 1153 ASN ASN A . n A 1 277 THR 277 1154 1154 THR THR A . n A 1 278 VAL 278 1155 1155 VAL VAL A . n A 1 279 GLU 279 1156 1156 GLU GLU A . n A 1 280 TYR 280 1157 1157 TYR TYR A . n A 1 281 GLU 281 1158 1158 GLU GLU A . n A 1 282 GLY 282 1159 ? ? ? A . n A 1 283 HIS 283 1160 ? ? ? A . n A 1 284 HIS 284 1161 ? ? ? A . n A 1 285 HIS 285 1162 ? ? ? A . n A 1 286 HIS 286 1163 ? ? ? A . n A 1 287 HIS 287 1164 ? ? ? A . n A 1 288 HIS 288 1165 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'New York SGX Research Center for Structural Genomics' _pdbx_SG_project.initial_of_center NYSGXRC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL 1 1 1 GOL GOL A . C 3 HOH 1 2 2 HOH HOH A . C 3 HOH 2 3 3 HOH HOH A . C 3 HOH 3 4 4 HOH HOH A . C 3 HOH 4 5 5 HOH HOH A . C 3 HOH 5 6 6 HOH HOH A . C 3 HOH 6 7 7 HOH HOH A . C 3 HOH 7 8 8 HOH HOH A . C 3 HOH 8 9 9 HOH HOH A . C 3 HOH 9 10 10 HOH HOH A . C 3 HOH 10 11 11 HOH HOH A . C 3 HOH 11 12 12 HOH HOH A . C 3 HOH 12 13 13 HOH HOH A . C 3 HOH 13 14 14 HOH HOH A . C 3 HOH 14 15 15 HOH HOH A . C 3 HOH 15 16 16 HOH HOH A . C 3 HOH 16 17 17 HOH HOH A . C 3 HOH 17 18 18 HOH HOH A . C 3 HOH 18 19 19 HOH HOH A . C 3 HOH 19 20 20 HOH HOH A . C 3 HOH 20 21 21 HOH HOH A . C 3 HOH 21 22 22 HOH HOH A . C 3 HOH 22 23 23 HOH HOH A . C 3 HOH 23 24 24 HOH HOH A . C 3 HOH 24 25 25 HOH HOH A . C 3 HOH 25 26 26 HOH HOH A . C 3 HOH 26 27 27 HOH HOH A . C 3 HOH 27 28 28 HOH HOH A . C 3 HOH 28 29 29 HOH HOH A . C 3 HOH 29 30 30 HOH HOH A . C 3 HOH 30 31 31 HOH HOH A . C 3 HOH 31 32 32 HOH HOH A . C 3 HOH 32 33 33 HOH HOH A . C 3 HOH 33 34 34 HOH HOH A . C 3 HOH 34 35 35 HOH HOH A . C 3 HOH 35 36 36 HOH HOH A . C 3 HOH 36 37 37 HOH HOH A . C 3 HOH 37 38 38 HOH HOH A . C 3 HOH 38 39 39 HOH HOH A . C 3 HOH 39 40 40 HOH HOH A . C 3 HOH 40 41 41 HOH HOH A . C 3 HOH 41 42 42 HOH HOH A . C 3 HOH 42 43 43 HOH HOH A . C 3 HOH 43 44 44 HOH HOH A . C 3 HOH 44 45 45 HOH HOH A . C 3 HOH 45 46 46 HOH HOH A . C 3 HOH 46 47 47 HOH HOH A . C 3 HOH 47 49 49 HOH HOH A . C 3 HOH 48 50 50 HOH HOH A . C 3 HOH 49 51 51 HOH HOH A . C 3 HOH 50 52 52 HOH HOH A . C 3 HOH 51 53 53 HOH HOH A . C 3 HOH 52 54 54 HOH HOH A . C 3 HOH 53 55 55 HOH HOH A . C 3 HOH 54 56 56 HOH HOH A . C 3 HOH 55 57 57 HOH HOH A . C 3 HOH 56 58 58 HOH HOH A . C 3 HOH 57 59 59 HOH HOH A . C 3 HOH 58 60 60 HOH HOH A . C 3 HOH 59 61 61 HOH HOH A . C 3 HOH 60 62 62 HOH HOH A . C 3 HOH 61 63 63 HOH HOH A . C 3 HOH 62 64 64 HOH HOH A . C 3 HOH 63 65 65 HOH HOH A . C 3 HOH 64 66 66 HOH HOH A . C 3 HOH 65 67 67 HOH HOH A . C 3 HOH 66 68 68 HOH HOH A . C 3 HOH 67 69 69 HOH HOH A . C 3 HOH 68 70 70 HOH HOH A . C 3 HOH 69 71 71 HOH HOH A . C 3 HOH 70 72 72 HOH HOH A . C 3 HOH 71 73 73 HOH HOH A . C 3 HOH 72 74 74 HOH HOH A . C 3 HOH 73 75 75 HOH HOH A . C 3 HOH 74 76 76 HOH HOH A . C 3 HOH 75 77 77 HOH HOH A . C 3 HOH 76 78 78 HOH HOH A . C 3 HOH 77 79 79 HOH HOH A . C 3 HOH 78 80 80 HOH HOH A . C 3 HOH 79 81 81 HOH HOH A . C 3 HOH 80 82 82 HOH HOH A . C 3 HOH 81 83 83 HOH HOH A . C 3 HOH 82 84 84 HOH HOH A . C 3 HOH 83 85 85 HOH HOH A . C 3 HOH 84 86 86 HOH HOH A . C 3 HOH 85 87 87 HOH HOH A . C 3 HOH 86 88 88 HOH HOH A . C 3 HOH 87 89 89 HOH HOH A . C 3 HOH 88 90 90 HOH HOH A . C 3 HOH 89 91 91 HOH HOH A . C 3 HOH 90 92 92 HOH HOH A . C 3 HOH 91 93 93 HOH HOH A . C 3 HOH 92 94 94 HOH HOH A . C 3 HOH 93 95 95 HOH HOH A . C 3 HOH 94 96 96 HOH HOH A . C 3 HOH 95 97 97 HOH HOH A . C 3 HOH 96 98 98 HOH HOH A . C 3 HOH 97 99 99 HOH HOH A . C 3 HOH 98 100 100 HOH HOH A . C 3 HOH 99 101 101 HOH HOH A . C 3 HOH 100 1166 1 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id MSE _pdbx_struct_mod_residue.label_seq_id 131 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id MSE _pdbx_struct_mod_residue.auth_seq_id 1008 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id MET _pdbx_struct_mod_residue.details SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-01-26 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 4 'Structure model' 1 3 2018-11-21 5 'Structure model' 1 4 2020-07-29 6 'Structure model' 1 5 2021-02-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Structure summary' 5 5 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Structure summary' 7 6 'Structure model' 'Database references' 8 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' audit_author 3 5 'Structure model' audit_author 4 5 'Structure model' struct_conn 5 5 'Structure model' struct_site 6 6 'Structure model' audit_author 7 6 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_audit_author.identifier_ORCID' 4 5 'Structure model' '_audit_author.name' 5 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 7 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 8 5 'Structure model' '_struct_site.pdbx_auth_seq_id' 9 6 'Structure model' '_audit_author.identifier_ORCID' 10 6 'Structure model' '_citation_author.identifier_ORCID' # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 REFMAC 5.2.0019 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 2 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 4 SCALA . ? ? ? ? 'data scaling' ? ? ? 5 SHELX C ? ? ? ? phasing ? ? ? 6 SHELXD . ? ? ? ? phasing ? ? ? 7 SHELXE . ? ? ? ? 'model building' ? ? ? # _pdbx_entry_details.entry_id 3KFO _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'N-TERMINAL RESIDUES ARE NOT DEFINED THE ELECTRON DENSITY DUE TO IN-CELL PROTEOLYSIS OF THE ORIGINALLY DESIGNED CONSTRUCT.' _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 974 ? B CZ A ARG 974 ? B NH1 A ARG 974 ? B 123.64 120.30 3.34 0.50 N 2 1 NE A ARG 974 ? B CZ A ARG 974 ? B NH2 A ARG 974 ? B 117.24 120.30 -3.06 0.50 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASN _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 1153 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 30.58 _pdbx_validate_torsion.psi 67.47 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 958 ? CG ? A LYS 81 CG 2 1 Y 1 A LYS 958 ? CD ? A LYS 81 CD 3 1 Y 1 A LYS 958 ? CE ? A LYS 81 CE 4 1 Y 1 A LYS 958 ? NZ ? A LYS 81 NZ 5 1 Y 1 A LYS 966 ? CG ? A LYS 89 CG 6 1 Y 1 A LYS 966 ? CD ? A LYS 89 CD 7 1 Y 1 A LYS 966 ? CE ? A LYS 89 CE 8 1 Y 1 A LYS 966 ? NZ ? A LYS 89 NZ 9 1 Y 1 A LYS 973 ? CG ? A LYS 96 CG 10 1 Y 1 A LYS 973 ? CD ? A LYS 96 CD 11 1 Y 1 A LYS 973 ? CE ? A LYS 96 CE 12 1 Y 1 A LYS 973 ? NZ ? A LYS 96 NZ 13 1 Y 1 A LYS 976 ? CG ? A LYS 99 CG 14 1 Y 1 A LYS 976 ? CD ? A LYS 99 CD 15 1 Y 1 A LYS 976 ? CE ? A LYS 99 CE 16 1 Y 1 A LYS 976 ? NZ ? A LYS 99 NZ 17 1 Y 1 A GLU 1032 ? CG ? A GLU 155 CG 18 1 Y 1 A GLU 1032 ? CD ? A GLU 155 CD 19 1 Y 1 A GLU 1032 ? OE1 ? A GLU 155 OE1 20 1 Y 1 A GLU 1032 ? OE2 ? A GLU 155 OE2 21 1 Y 1 A GLU 1053 ? CG ? A GLU 176 CG 22 1 Y 1 A GLU 1053 ? CD ? A GLU 176 CD 23 1 Y 1 A GLU 1053 ? OE1 ? A GLU 176 OE1 24 1 Y 1 A GLU 1053 ? OE2 ? A GLU 176 OE2 25 1 Y 1 A LYS 1063 ? CG ? A LYS 186 CG 26 1 Y 1 A LYS 1063 ? CD ? A LYS 186 CD 27 1 Y 1 A LYS 1063 ? CE ? A LYS 186 CE 28 1 Y 1 A LYS 1063 ? NZ ? A LYS 186 NZ 29 1 Y 1 A LYS 1072 ? CG ? A LYS 195 CG 30 1 Y 1 A LYS 1072 ? CD ? A LYS 195 CD 31 1 Y 1 A LYS 1072 ? CE ? A LYS 195 CE 32 1 Y 1 A LYS 1072 ? NZ ? A LYS 195 NZ 33 1 Y 1 A ASN 1073 ? CG ? A ASN 196 CG 34 1 Y 1 A ASN 1073 ? OD1 ? A ASN 196 OD1 35 1 Y 1 A ASN 1073 ? ND2 ? A ASN 196 ND2 36 1 Y 1 A LEU 1083 ? CG ? A LEU 206 CG 37 1 Y 1 A LEU 1083 ? CD1 ? A LEU 206 CD1 38 1 Y 1 A LEU 1083 ? CD2 ? A LEU 206 CD2 39 1 Y 1 A GLU 1093 ? CG ? A GLU 216 CG 40 1 Y 1 A GLU 1093 ? CD ? A GLU 216 CD 41 1 Y 1 A GLU 1093 ? OE1 ? A GLU 216 OE1 42 1 Y 1 A GLU 1093 ? OE2 ? A GLU 216 OE2 43 1 Y 1 A GLU 1097 ? CG ? A GLU 220 CG 44 1 Y 1 A GLU 1097 ? CD ? A GLU 220 CD 45 1 Y 1 A GLU 1097 ? OE1 ? A GLU 220 OE1 46 1 Y 1 A GLU 1097 ? OE2 ? A GLU 220 OE2 47 1 Y 1 A ASP 1126 ? CG ? A ASP 249 CG 48 1 Y 1 A ASP 1126 ? OD1 ? A ASP 249 OD1 49 1 Y 1 A ASP 1126 ? OD2 ? A ASP 249 OD2 50 1 Y 1 A LYS 1144 ? CG ? A LYS 267 CG 51 1 Y 1 A LYS 1144 ? CD ? A LYS 267 CD 52 1 Y 1 A LYS 1144 ? CE ? A LYS 267 CE 53 1 Y 1 A LYS 1144 ? NZ ? A LYS 267 NZ 54 1 Y 1 A TYR 1150 ? CG ? A TYR 273 CG 55 1 Y 1 A TYR 1150 ? CD1 ? A TYR 273 CD1 56 1 Y 1 A TYR 1150 ? CD2 ? A TYR 273 CD2 57 1 Y 1 A TYR 1150 ? CE1 ? A TYR 273 CE1 58 1 Y 1 A TYR 1150 ? CE2 ? A TYR 273 CE2 59 1 Y 1 A TYR 1150 ? CZ ? A TYR 273 CZ 60 1 Y 1 A TYR 1150 ? OH ? A TYR 273 OH 61 1 Y 1 A GLU 1151 ? CG ? A GLU 274 CG 62 1 Y 1 A GLU 1151 ? CD ? A GLU 274 CD 63 1 Y 1 A GLU 1151 ? OE1 ? A GLU 274 OE1 64 1 Y 1 A GLU 1151 ? OE2 ? A GLU 274 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 878 ? A MSE 1 2 1 Y 1 A SER 879 ? A SER 2 3 1 Y 1 A LEU 880 ? A LEU 3 4 1 Y 1 A LYS 881 ? A LYS 4 5 1 Y 1 A TYR 882 ? A TYR 5 6 1 Y 1 A GLY 883 ? A GLY 6 7 1 Y 1 A HIS 884 ? A HIS 7 8 1 Y 1 A VAL 885 ? A VAL 8 9 1 Y 1 A ALA 886 ? A ALA 9 10 1 Y 1 A TRP 887 ? A TRP 10 11 1 Y 1 A ILE 888 ? A ILE 11 12 1 Y 1 A GLN 889 ? A GLN 12 13 1 Y 1 A GLN 890 ? A GLN 13 14 1 Y 1 A ILE 891 ? A ILE 14 15 1 Y 1 A LEU 892 ? A LEU 15 16 1 Y 1 A ASP 893 ? A ASP 16 17 1 Y 1 A GLY 894 ? A GLY 17 18 1 Y 1 A SER 895 ? A SER 18 19 1 Y 1 A TYR 896 ? A TYR 19 20 1 Y 1 A ALA 897 ? A ALA 20 21 1 Y 1 A ASP 898 ? A ASP 21 22 1 Y 1 A ALA 899 ? A ALA 22 23 1 Y 1 A MSE 900 ? A MSE 23 24 1 Y 1 A ASN 901 ? A ASN 24 25 1 Y 1 A THR 902 ? A THR 25 26 1 Y 1 A LEU 903 ? A LEU 26 27 1 Y 1 A LYS 904 ? A LYS 27 28 1 Y 1 A ASN 905 ? A ASN 28 29 1 Y 1 A ILE 906 ? A ILE 29 30 1 Y 1 A THR 907 ? A THR 30 31 1 Y 1 A VAL 908 ? A VAL 31 32 1 Y 1 A ASP 909 ? A ASP 32 33 1 Y 1 A ASP 910 ? A ASP 33 34 1 Y 1 A SER 911 ? A SER 34 35 1 Y 1 A LYS 912 ? A LYS 35 36 1 Y 1 A LYS 913 ? A LYS 36 37 1 Y 1 A GLY 914 ? A GLY 37 38 1 Y 1 A GLU 915 ? A GLU 38 39 1 Y 1 A SER 916 ? A SER 39 40 1 Y 1 A LEU 917 ? A LEU 40 41 1 Y 1 A SER 918 ? A SER 41 42 1 Y 1 A GLU 919 ? A GLU 42 43 1 Y 1 A CYS 920 ? A CYS 43 44 1 Y 1 A GLU 921 ? A GLU 44 45 1 Y 1 A LEU 922 ? A LEU 45 46 1 Y 1 A HIS 923 ? A HIS 46 47 1 Y 1 A LEU 924 ? A LEU 47 48 1 Y 1 A ASN 925 ? A ASN 48 49 1 Y 1 A VAL 926 ? A VAL 49 50 1 Y 1 A ALA 927 ? A ALA 50 51 1 Y 1 A LYS 928 ? A LYS 51 52 1 Y 1 A LEU 929 ? A LEU 52 53 1 Y 1 A SER 930 ? A SER 53 54 1 Y 1 A SER 931 ? A SER 54 55 1 Y 1 A LEU 932 ? A LEU 55 56 1 Y 1 A LEU 933 ? A LEU 56 57 1 Y 1 A VAL 934 ? A VAL 57 58 1 Y 1 A GLU 935 ? A GLU 58 59 1 Y 1 A LYS 936 ? A LYS 59 60 1 Y 1 A ASP 937 ? A ASP 60 61 1 Y 1 A ASN 938 ? A ASN 61 62 1 Y 1 A LEU 939 ? A LEU 62 63 1 Y 1 A ASP 940 ? A ASP 63 64 1 Y 1 A ILE 941 ? A ILE 64 65 1 Y 1 A ASN 942 ? A ASN 65 66 1 Y 1 A THR 943 ? A THR 66 67 1 Y 1 A LEU 944 ? A LEU 67 68 1 Y 1 A ARG 945 ? A ARG 68 69 1 Y 1 A GLY 1159 ? A GLY 282 70 1 Y 1 A HIS 1160 ? A HIS 283 71 1 Y 1 A HIS 1161 ? A HIS 284 72 1 Y 1 A HIS 1162 ? A HIS 285 73 1 Y 1 A HIS 1163 ? A HIS 286 74 1 Y 1 A HIS 1164 ? A HIS 287 75 1 Y 1 A HIS 1165 ? A HIS 288 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 water HOH #