HEADER TRANSFERASE 31-OCT-09 3KHY TITLE CRYSTAL STRUCTURE OF A PROPIONATE KINASE FROM FRANCISELLA TULARENSIS TITLE 2 SUBSP. TULARENSIS SCHU S4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROPIONATE KINASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.7.2.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: FRANCISELLA TULARENSIS SUBSP. TULARENSIS; SOURCE 3 ORGANISM_TAXID: 119856; SOURCE 4 GENE: FTT1753, FTT_1753, TDCD; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS(DE3)-RIPL; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS PROPIONATE KINASE, CSGID, IDP01739, ATP-BINDING, KINASE, NUCLEOTIDE- KEYWDS 2 BINDING, TRANSFERASE, STRUCTURAL GENOMICS, NATIONAL INSTITUTE OF KEYWDS 3 ALLERGY AND INFECTIOUS DISEASES, NATIONAL INSTITUTES OF HEALTH, KEYWDS 4 DEPARTMENT OF HEALTH AND HUMAN SERVICES, CENTER FOR STRUCTURAL KEYWDS 5 GENOMICS OF INFECTIOUS DISEASES EXPDTA X-RAY DIFFRACTION AUTHOR J.S.BRUNZELLE,T.SKARINA,S.SHARMA,Y.WANG,A.SAVCHENKO,W.F.ANDERSON, AUTHOR 2 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 3 30-OCT-24 3KHY 1 LINK REVDAT 2 01-OCT-14 3KHY 1 AUTHOR JRNL VERSN REVDAT 1 19-JAN-10 3KHY 0 JRNL AUTH J.S.BRUNZELLE,S.S.SHARMA,T.SKARINA,Y.WANG,A.SAVCHENKO, JRNL AUTH 2 W.F.ANDERSON, JRNL AUTH 3 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 4 (CSGID) JRNL TITL CRYSTAL STRUCTURE OF A PROPIONATE KINASE FROM FRANCISELLA JRNL TITL 2 TULARENSIS SUBSP. TULARENSIS SCHU S4 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.98 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.4_115) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.98 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.51 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.040 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 60374 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.155 REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : 0.193 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 3066 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.5134 - 4.2579 1.00 6170 321 0.1533 0.1690 REMARK 3 2 4.2579 - 3.3814 1.00 5937 328 0.1343 0.1647 REMARK 3 3 3.3814 - 2.9545 1.00 5883 317 0.1721 0.2125 REMARK 3 4 2.9545 - 2.6846 1.00 5852 297 0.1827 0.2175 REMARK 3 5 2.6846 - 2.4923 0.99 5766 313 0.1615 0.2098 REMARK 3 6 2.4923 - 2.3454 0.98 5750 311 0.1492 0.2026 REMARK 3 7 2.3454 - 2.2280 0.98 5724 299 0.1410 0.1918 REMARK 3 8 2.2280 - 2.1310 0.97 5654 298 0.1436 0.2027 REMARK 3 9 2.1310 - 2.0490 0.96 5598 290 0.1482 0.1961 REMARK 3 10 2.0490 - 1.9780 0.86 4974 292 0.1639 0.2417 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.37 REMARK 3 B_SOL : 48.23 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 6080 REMARK 3 ANGLE : 1.011 8225 REMARK 3 CHIRALITY : 0.071 953 REMARK 3 PLANARITY : 0.004 1051 REMARK 3 DIHEDRAL : 16.764 2191 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 1:61) REMARK 3 ORIGIN FOR THE GROUP (A): 40.7207 33.2013 67.8238 REMARK 3 T TENSOR REMARK 3 T11: 0.3343 T22: 0.2106 REMARK 3 T33: 0.1543 T12: -0.0719 REMARK 3 T13: 0.0555 T23: -0.0230 REMARK 3 L TENSOR REMARK 3 L11: 0.1045 L22: 0.5675 REMARK 3 L33: 0.9269 L12: -0.0967 REMARK 3 L13: 0.0262 L23: -0.0576 REMARK 3 S TENSOR REMARK 3 S11: -0.2171 S12: -0.0738 S13: 0.1013 REMARK 3 S21: -0.1573 S22: 0.0157 S23: -0.0805 REMARK 3 S31: 0.5254 S32: -0.0736 S33: -0.0055 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 62:99) REMARK 3 ORIGIN FOR THE GROUP (A): 45.5892 31.4784 76.8450 REMARK 3 T TENSOR REMARK 3 T11: 0.3457 T22: 0.2110 REMARK 3 T33: 0.1809 T12: 0.1221 REMARK 3 T13: 0.0698 T23: -0.0161 REMARK 3 L TENSOR REMARK 3 L11: 0.4807 L22: 0.6809 REMARK 3 L33: 0.5184 L12: -0.0187 REMARK 3 L13: -0.1759 L23: -0.1717 REMARK 3 S TENSOR REMARK 3 S11: -0.2282 S12: -0.0720 S13: -0.1876 REMARK 3 S21: -0.0978 S22: 0.1159 S23: -0.1543 REMARK 3 S31: 0.7137 S32: 0.1872 S33: 0.0133 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 100:134) REMARK 3 ORIGIN FOR THE GROUP (A): 39.2680 26.7510 85.3165 REMARK 3 T TENSOR REMARK 3 T11: 0.6175 T22: 0.1543 REMARK 3 T33: 0.2701 T12: 0.0372 REMARK 3 T13: 0.1005 T23: 0.0082 REMARK 3 L TENSOR REMARK 3 L11: 0.1389 L22: 0.3225 REMARK 3 L33: 0.8149 L12: 0.0920 REMARK 3 L13: 0.0455 L23: 0.1708 REMARK 3 S TENSOR REMARK 3 S11: -0.2637 S12: -0.0755 S13: -0.3313 REMARK 3 S21: 0.0009 S22: -0.0233 S23: 0.0098 REMARK 3 S31: 0.8473 S32: -0.1576 S33: -0.0018 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 135:224) REMARK 3 ORIGIN FOR THE GROUP (A): 36.0518 47.7072 91.0271 REMARK 3 T TENSOR REMARK 3 T11: 0.1148 T22: 0.1266 REMARK 3 T33: 0.1155 T12: 0.0237 REMARK 3 T13: -0.0219 T23: 0.0128 REMARK 3 L TENSOR REMARK 3 L11: 0.3123 L22: 0.3704 REMARK 3 L33: 0.9780 L12: -0.2913 REMARK 3 L13: -0.1879 L23: -0.2433 REMARK 3 S TENSOR REMARK 3 S11: 0.0053 S12: -0.0457 S13: 0.0029 REMARK 3 S21: 0.0186 S22: -0.0021 S23: -0.0420 REMARK 3 S31: 0.1594 S32: 0.2369 S33: 0.0054 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 225:298) REMARK 3 ORIGIN FOR THE GROUP (A): 15.5731 48.0464 79.4866 REMARK 3 T TENSOR REMARK 3 T11: 0.1191 T22: 0.1553 REMARK 3 T33: 0.1271 T12: -0.0200 REMARK 3 T13: 0.0019 T23: -0.0134 REMARK 3 L TENSOR REMARK 3 L11: 0.7740 L22: 0.3679 REMARK 3 L33: 0.5333 L12: -0.1778 REMARK 3 L13: -0.4589 L23: -0.2236 REMARK 3 S TENSOR REMARK 3 S11: -0.0444 S12: 0.1505 S13: -0.0882 REMARK 3 S21: -0.0589 S22: -0.0339 S23: -0.0200 REMARK 3 S31: 0.1743 S32: -0.1236 S33: -0.0002 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 299:384) REMARK 3 ORIGIN FOR THE GROUP (A): 35.5737 60.3796 80.5116 REMARK 3 T TENSOR REMARK 3 T11: 0.0805 T22: 0.1345 REMARK 3 T33: 0.1248 T12: -0.0111 REMARK 3 T13: 0.0021 T23: 0.0056 REMARK 3 L TENSOR REMARK 3 L11: 0.4646 L22: 0.1759 REMARK 3 L33: 0.9082 L12: -0.0775 REMARK 3 L13: -0.1839 L23: 0.0166 REMARK 3 S TENSOR REMARK 3 S11: 0.0518 S12: 0.0246 S13: 0.0869 REMARK 3 S21: 0.0259 S22: 0.0210 S23: -0.0720 REMARK 3 S31: -0.0786 S32: 0.1070 S33: -0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN B AND RESID 1:77) REMARK 3 ORIGIN FOR THE GROUP (A): -7.0040 58.1992 119.4931 REMARK 3 T TENSOR REMARK 3 T11: 0.1927 T22: 0.1033 REMARK 3 T33: 0.1780 T12: -0.0000 REMARK 3 T13: 0.0333 T23: 0.0063 REMARK 3 L TENSOR REMARK 3 L11: 0.7046 L22: 0.5625 REMARK 3 L33: 1.6605 L12: 0.1941 REMARK 3 L13: 0.5193 L23: -0.1932 REMARK 3 S TENSOR REMARK 3 S11: 0.2619 S12: -0.1029 S13: -0.0444 REMARK 3 S21: 0.1165 S22: -0.1148 S23: 0.2073 REMARK 3 S31: -0.0609 S32: -0.0087 S33: -0.0009 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN B AND RESID 78:141) REMARK 3 ORIGIN FOR THE GROUP (A): -8.5781 56.4183 101.3174 REMARK 3 T TENSOR REMARK 3 T11: 0.0781 T22: 0.2324 REMARK 3 T33: 0.1567 T12: 0.0132 REMARK 3 T13: 0.0136 T23: -0.0259 REMARK 3 L TENSOR REMARK 3 L11: 0.8634 L22: 0.7678 REMARK 3 L33: 0.8336 L12: 0.2285 REMARK 3 L13: -0.2449 L23: -0.3068 REMARK 3 S TENSOR REMARK 3 S11: -0.0222 S12: 0.3246 S13: -0.1535 REMARK 3 S21: -0.0074 S22: -0.0472 S23: 0.0965 REMARK 3 S31: 0.0361 S32: -0.4055 S33: -0.1202 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN B AND RESID 142:224) REMARK 3 ORIGIN FOR THE GROUP (A): 9.3632 62.6723 94.2102 REMARK 3 T TENSOR REMARK 3 T11: 0.0989 T22: 0.1047 REMARK 3 T33: 0.1218 T12: 0.0073 REMARK 3 T13: 0.0101 T23: 0.0145 REMARK 3 L TENSOR REMARK 3 L11: 0.3924 L22: 0.4003 REMARK 3 L33: 0.5060 L12: 0.0433 REMARK 3 L13: -0.2011 L23: 0.3629 REMARK 3 S TENSOR REMARK 3 S11: 0.0667 S12: 0.0193 S13: 0.0442 REMARK 3 S21: 0.0128 S22: -0.0110 S23: 0.1090 REMARK 3 S31: -0.0397 S32: -0.1766 S33: 0.0101 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN B AND RESID 225:299) REMARK 3 ORIGIN FOR THE GROUP (A): 19.6384 46.0300 106.1427 REMARK 3 T TENSOR REMARK 3 T11: 0.1706 T22: 0.1296 REMARK 3 T33: 0.1208 T12: -0.0002 REMARK 3 T13: 0.0136 T23: 0.0333 REMARK 3 L TENSOR REMARK 3 L11: 0.5581 L22: 0.3669 REMARK 3 L33: 0.2066 L12: 0.1890 REMARK 3 L13: -0.2525 L23: 0.0423 REMARK 3 S TENSOR REMARK 3 S11: -0.0518 S12: -0.1513 S13: -0.0871 REMARK 3 S21: 0.1447 S22: -0.0366 S23: 0.1190 REMARK 3 S31: 0.0441 S32: -0.0241 S33: -0.0106 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN B AND RESID 300:370) REMARK 3 ORIGIN FOR THE GROUP (A): 23.3047 69.5328 105.1893 REMARK 3 T TENSOR REMARK 3 T11: 0.1194 T22: 0.1237 REMARK 3 T33: 0.1369 T12: -0.0195 REMARK 3 T13: 0.0068 T23: -0.0381 REMARK 3 L TENSOR REMARK 3 L11: 0.5819 L22: 0.6452 REMARK 3 L33: 0.4562 L12: -0.0500 REMARK 3 L13: -0.0335 L23: 0.5194 REMARK 3 S TENSOR REMARK 3 S11: 0.0483 S12: -0.1663 S13: 0.1894 REMARK 3 S21: 0.0908 S22: 0.0378 S23: -0.1422 REMARK 3 S31: -0.1344 S32: 0.1604 S33: -0.0000 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN B AND RESID 371:384) REMARK 3 ORIGIN FOR THE GROUP (A): -4.1779 69.1390 105.5052 REMARK 3 T TENSOR REMARK 3 T11: 0.2872 T22: 0.1182 REMARK 3 T33: 0.2288 T12: 0.0625 REMARK 3 T13: 0.0734 T23: 0.0491 REMARK 3 L TENSOR REMARK 3 L11: 0.4636 L22: 0.1596 REMARK 3 L33: 0.6251 L12: 0.0037 REMARK 3 L13: -0.4949 L23: 0.1218 REMARK 3 S TENSOR REMARK 3 S11: 0.3209 S12: -0.0021 S13: 0.2421 REMARK 3 S21: -0.3385 S22: -0.1798 S23: -0.1031 REMARK 3 S31: -0.4878 S32: 0.0557 S33: 0.0400 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3KHY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-NOV-09. REMARK 100 THE DEPOSITION ID IS D_1000056015. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-OCT-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97857 REMARK 200 MONOCHROMATOR : DIAMOND-111 REMARK 200 OPTICS : BE-LENES REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 117233 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.970 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.600 REMARK 200 R MERGE (I) : 0.12400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 7.60 REMARK 200 R MERGE FOR SHELL (I) : 0.49000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX 1.4_115 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NAFORMATE 4M, 0.3M 195 NDSB, PH 7, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 33.53950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 74.83050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.56350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 74.83050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.53950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.56350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -50.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER B 2 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU B 379 O HOH B 482 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 46 -112.59 -113.49 REMARK 500 LEU A 189 -71.81 -82.88 REMARK 500 SER A 264 -150.69 -112.10 REMARK 500 ASN A 371 77.91 -152.96 REMARK 500 ALA B 46 -126.68 -117.29 REMARK 500 HIS B 117 -54.38 -127.82 REMARK 500 ALA B 173 -165.16 -160.36 REMARK 500 HIS B 174 19.50 55.17 REMARK 500 PRO B 224 5.25 -68.22 REMARK 500 SER B 264 -152.70 -109.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: IDP01739 RELATED DB: TARGETDB DBREF 3KHY A 1 384 UNP Q5NE95 Q5NE95_FRATT 1 384 DBREF 3KHY B 1 384 UNP Q5NE95 Q5NE95_FRATT 1 384 SEQRES 1 A 384 MSE SER GLU ILE LEU VAL LEU ASN CYS GLY SER SER SER SEQRES 2 A 384 VAL LYS PHE ALA LEU ILE ASN PRO HIS THR SER GLN SER SEQRES 3 A 384 LEU VAL THR GLY LEU ALA GLU ASN ILE ALA THR LYS ASN SEQRES 4 A 384 CYS LYS VAL VAL PHE LYS ALA GLU HIS LYS ILE VAL LYS SEQRES 5 A 384 TYR LEU GLU ASN GLY SER TYR LYS ASP VAL PHE GLU MSE SEQRES 6 A 384 LEU LYS ASP PHE LEU VAL GLU ASN LYS HIS LEU GLU LYS SEQRES 7 A 384 ILE VAL ALA ILE GLY HIS ARG VAL VAL HIS GLY GLY GLN SEQRES 8 A 384 TYR PHE SER LYS SER VAL LEU ILE ASN ALA ASP SER LEU SEQRES 9 A 384 GLU LYS ILE LYS ALA CYS ILE ALA LEU ALA PRO LEU HIS SEQRES 10 A 384 ASN PRO ALA HIS ILE GLU GLY ILE ARG PHE CYS GLN GLN SEQRES 11 A 384 ILE PHE PRO GLU LEU PRO GLN VAL ALA VAL PHE ASP THR SEQRES 12 A 384 ALA PHE HIS GLN THR MSE PRO SER TYR ILE ALA GLU TYR SEQRES 13 A 384 ALA ILE PRO TYR GLU LEU THR HIS LYS HIS ASN ILE ARG SEQRES 14 A 384 LYS TYR GLY ALA HIS GLY THR SER HIS LYS TYR VAL SER SEQRES 15 A 384 GLU GLN ALA ALA LYS ILE LEU THR GLN GLN LYS ALA ASN SEQRES 16 A 384 VAL ILE VAL ALA HIS LEU GLY ASN GLY CYS SER ILE THR SEQRES 17 A 384 ALA VAL VAL ASP GLY LYS SER ILE ASP THR SER MSE GLY SEQRES 18 A 384 LEU THR PRO LEU ASP GLY LEU VAL MSE GLY THR ARG SER SEQRES 19 A 384 GLY CYS ILE ASP PRO SER ILE PHE ALA TYR ILE SER ASP SEQRES 20 A 384 ASN LEU GLY TRP SER VAL THR GLU ILE THR ASN MSE LEU SEQRES 21 A 384 ASN LYS GLN SER GLY LEU LEU GLY ILE CYS GLY HIS ASN SEQRES 22 A 384 ASP MSE ARG GLU VAL SER GLN LEU ALA ALA LYS GLY ASP SEQRES 23 A 384 SER LEU ALA LYS LEU ALA ILE GLU ILE PHE SER HIS ARG SEQRES 24 A 384 VAL ALA LYS PHE VAL ALA SER TYR MSE ILE TYR PHE ASN SEQRES 25 A 384 LYS LEU ASP ALA LEU VAL PHE THR GLY GLY ILE GLY GLU SEQRES 26 A 384 ASN ALA ALA ASN ILE ARG LYS ASN ILE ILE SER LYS LEU SEQRES 27 A 384 ALA ASN LEU GLY PHE MSE ILE ASP HIS GLN LYS ASN SER SEQRES 28 A 384 ASN SER GLU THR PHE ILE ASN SER LYS ASN SER HIS ASN SEQRES 29 A 384 ILE MSE VAL ILE ALA THR ASN GLU GLU LEU MSE ILE ALA SEQRES 30 A 384 GLN GLU THR GLN ASN LEU ILE SEQRES 1 B 384 MSE SER GLU ILE LEU VAL LEU ASN CYS GLY SER SER SER SEQRES 2 B 384 VAL LYS PHE ALA LEU ILE ASN PRO HIS THR SER GLN SER SEQRES 3 B 384 LEU VAL THR GLY LEU ALA GLU ASN ILE ALA THR LYS ASN SEQRES 4 B 384 CYS LYS VAL VAL PHE LYS ALA GLU HIS LYS ILE VAL LYS SEQRES 5 B 384 TYR LEU GLU ASN GLY SER TYR LYS ASP VAL PHE GLU MSE SEQRES 6 B 384 LEU LYS ASP PHE LEU VAL GLU ASN LYS HIS LEU GLU LYS SEQRES 7 B 384 ILE VAL ALA ILE GLY HIS ARG VAL VAL HIS GLY GLY GLN SEQRES 8 B 384 TYR PHE SER LYS SER VAL LEU ILE ASN ALA ASP SER LEU SEQRES 9 B 384 GLU LYS ILE LYS ALA CYS ILE ALA LEU ALA PRO LEU HIS SEQRES 10 B 384 ASN PRO ALA HIS ILE GLU GLY ILE ARG PHE CYS GLN GLN SEQRES 11 B 384 ILE PHE PRO GLU LEU PRO GLN VAL ALA VAL PHE ASP THR SEQRES 12 B 384 ALA PHE HIS GLN THR MSE PRO SER TYR ILE ALA GLU TYR SEQRES 13 B 384 ALA ILE PRO TYR GLU LEU THR HIS LYS HIS ASN ILE ARG SEQRES 14 B 384 LYS TYR GLY ALA HIS GLY THR SER HIS LYS TYR VAL SER SEQRES 15 B 384 GLU GLN ALA ALA LYS ILE LEU THR GLN GLN LYS ALA ASN SEQRES 16 B 384 VAL ILE VAL ALA HIS LEU GLY ASN GLY CYS SER ILE THR SEQRES 17 B 384 ALA VAL VAL ASP GLY LYS SER ILE ASP THR SER MSE GLY SEQRES 18 B 384 LEU THR PRO LEU ASP GLY LEU VAL MSE GLY THR ARG SER SEQRES 19 B 384 GLY CYS ILE ASP PRO SER ILE PHE ALA TYR ILE SER ASP SEQRES 20 B 384 ASN LEU GLY TRP SER VAL THR GLU ILE THR ASN MSE LEU SEQRES 21 B 384 ASN LYS GLN SER GLY LEU LEU GLY ILE CYS GLY HIS ASN SEQRES 22 B 384 ASP MSE ARG GLU VAL SER GLN LEU ALA ALA LYS GLY ASP SEQRES 23 B 384 SER LEU ALA LYS LEU ALA ILE GLU ILE PHE SER HIS ARG SEQRES 24 B 384 VAL ALA LYS PHE VAL ALA SER TYR MSE ILE TYR PHE ASN SEQRES 25 B 384 LYS LEU ASP ALA LEU VAL PHE THR GLY GLY ILE GLY GLU SEQRES 26 B 384 ASN ALA ALA ASN ILE ARG LYS ASN ILE ILE SER LYS LEU SEQRES 27 B 384 ALA ASN LEU GLY PHE MSE ILE ASP HIS GLN LYS ASN SER SEQRES 28 B 384 ASN SER GLU THR PHE ILE ASN SER LYS ASN SER HIS ASN SEQRES 29 B 384 ILE MSE VAL ILE ALA THR ASN GLU GLU LEU MSE ILE ALA SEQRES 30 B 384 GLN GLU THR GLN ASN LEU ILE MODRES 3KHY MSE A 1 MET SELENOMETHIONINE MODRES 3KHY MSE A 65 MET SELENOMETHIONINE MODRES 3KHY MSE A 149 MET SELENOMETHIONINE MODRES 3KHY MSE A 220 MET SELENOMETHIONINE MODRES 3KHY MSE A 230 MET SELENOMETHIONINE MODRES 3KHY MSE A 259 MET SELENOMETHIONINE MODRES 3KHY MSE A 275 MET SELENOMETHIONINE MODRES 3KHY MSE A 308 MET SELENOMETHIONINE MODRES 3KHY MSE A 344 MET SELENOMETHIONINE MODRES 3KHY MSE A 366 MET SELENOMETHIONINE MODRES 3KHY MSE A 375 MET SELENOMETHIONINE MODRES 3KHY MSE B 1 MET SELENOMETHIONINE MODRES 3KHY MSE B 65 MET SELENOMETHIONINE MODRES 3KHY MSE B 149 MET SELENOMETHIONINE MODRES 3KHY MSE B 220 MET SELENOMETHIONINE MODRES 3KHY MSE B 230 MET SELENOMETHIONINE MODRES 3KHY MSE B 259 MET SELENOMETHIONINE MODRES 3KHY MSE B 275 MET SELENOMETHIONINE MODRES 3KHY MSE B 308 MET SELENOMETHIONINE MODRES 3KHY MSE B 344 MET SELENOMETHIONINE MODRES 3KHY MSE B 366 MET SELENOMETHIONINE MODRES 3KHY MSE B 375 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 65 8 HET MSE A 149 8 HET MSE A 220 8 HET MSE A 230 8 HET MSE A 259 8 HET MSE A 275 8 HET MSE A 308 8 HET MSE A 344 8 HET MSE A 366 8 HET MSE A 375 8 HET MSE B 1 8 HET MSE B 65 8 HET MSE B 149 8 HET MSE B 220 8 HET MSE B 230 8 HET MSE B 259 8 HET MSE B 275 8 HET MSE B 308 8 HET MSE B 344 8 HET MSE B 366 8 HET MSE B 375 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 22(C5 H11 N O2 SE) FORMUL 3 HOH *656(H2 O) HELIX 1 1 SER A 58 ASN A 73 1 16 HELIX 2 2 HIS A 75 GLU A 77 5 3 HELIX 3 3 ASN A 100 CYS A 110 1 11 HELIX 4 4 ILE A 111 ALA A 114 5 4 HELIX 5 5 HIS A 117 PHE A 132 1 16 HELIX 6 6 THR A 143 MSE A 149 5 7 HELIX 7 7 PRO A 150 GLU A 155 1 6 HELIX 8 8 PRO A 159 LYS A 165 1 7 HELIX 9 9 HIS A 174 LEU A 189 1 16 HELIX 10 10 SER A 240 GLY A 250 1 11 HELIX 11 11 SER A 252 GLN A 263 1 12 HELIX 12 12 SER A 264 GLY A 271 1 8 HELIX 13 13 ASP A 274 LYS A 284 1 11 HELIX 14 14 ASP A 286 MSE A 308 1 23 HELIX 15 15 ILE A 309 PHE A 311 5 3 HELIX 16 16 GLY A 321 ALA A 327 1 7 HELIX 17 17 ALA A 327 LEU A 338 1 12 HELIX 18 18 ALA A 339 GLY A 342 5 4 HELIX 19 19 ASP A 346 ASN A 352 1 7 HELIX 20 20 ASN A 371 LEU A 383 1 13 HELIX 21 21 SER B 58 ASN B 73 1 16 HELIX 22 22 HIS B 75 GLU B 77 5 3 HELIX 23 23 ASN B 100 CYS B 110 1 11 HELIX 24 24 ILE B 111 LEU B 113 5 3 HELIX 25 25 HIS B 117 PHE B 132 1 16 HELIX 26 26 THR B 143 MSE B 149 5 7 HELIX 27 27 PRO B 150 GLU B 155 1 6 HELIX 28 28 PRO B 159 LYS B 165 1 7 HELIX 29 29 HIS B 174 LEU B 189 1 16 HELIX 30 30 SER B 240 GLY B 250 1 11 HELIX 31 31 SER B 252 GLN B 263 1 12 HELIX 32 32 SER B 264 GLY B 271 1 8 HELIX 33 33 ASP B 274 LYS B 284 1 11 HELIX 34 34 ASP B 286 MSE B 308 1 23 HELIX 35 35 ILE B 309 PHE B 311 5 3 HELIX 36 36 GLY B 321 ALA B 327 1 7 HELIX 37 37 ALA B 327 LYS B 337 1 11 HELIX 38 38 LEU B 338 GLY B 342 5 5 HELIX 39 39 ASP B 346 ASN B 352 1 7 HELIX 40 40 ASN B 371 ILE B 384 1 14 SHEET 1 A 8 LYS A 49 TYR A 53 0 SHEET 2 A 8 LYS A 41 LYS A 45 -1 N VAL A 42 O LYS A 52 SHEET 3 A 8 GLN A 25 GLU A 33 -1 N THR A 29 O LYS A 45 SHEET 4 A 8 VAL A 14 ASN A 20 -1 N LEU A 18 O LEU A 27 SHEET 5 A 8 GLU A 3 CYS A 9 -1 N VAL A 6 O ALA A 17 SHEET 6 A 8 ILE A 79 VAL A 86 1 O GLY A 83 N LEU A 7 SHEET 7 A 8 GLN A 137 PHE A 141 1 O VAL A 138 N HIS A 84 SHEET 8 A 8 VAL A 97 LEU A 98 -1 N VAL A 97 O ALA A 139 SHEET 1 B 5 LYS A 214 THR A 218 0 SHEET 2 B 5 CYS A 205 VAL A 211 -1 N VAL A 211 O LYS A 214 SHEET 3 B 5 VAL A 196 LEU A 201 -1 N VAL A 196 O VAL A 210 SHEET 4 B 5 ALA A 316 THR A 320 1 O VAL A 318 N ALA A 199 SHEET 5 B 5 ILE A 365 VAL A 367 1 O MSE A 366 N LEU A 317 SHEET 1 C 8 LYS B 49 TYR B 53 0 SHEET 2 C 8 LYS B 41 LYS B 45 -1 N PHE B 44 O ILE B 50 SHEET 3 C 8 GLN B 25 GLU B 33 -1 N THR B 29 O LYS B 45 SHEET 4 C 8 VAL B 14 ASN B 20 -1 N LEU B 18 O VAL B 28 SHEET 5 C 8 GLU B 3 CYS B 9 -1 N VAL B 6 O ALA B 17 SHEET 6 C 8 ILE B 79 VAL B 86 1 O GLY B 83 N LEU B 7 SHEET 7 C 8 GLN B 137 PHE B 141 1 O VAL B 138 N HIS B 84 SHEET 8 C 8 VAL B 97 LEU B 98 -1 N VAL B 97 O ALA B 139 SHEET 1 D 5 LYS B 214 THR B 218 0 SHEET 2 D 5 CYS B 205 VAL B 211 -1 N ALA B 209 O ILE B 216 SHEET 3 D 5 VAL B 196 LEU B 201 -1 N VAL B 196 O VAL B 210 SHEET 4 D 5 ALA B 316 THR B 320 1 O VAL B 318 N ALA B 199 SHEET 5 D 5 ILE B 365 VAL B 367 1 O MSE B 366 N PHE B 319 LINK C MSE A 1 N SER A 2 1555 1555 1.33 LINK C GLU A 64 N MSE A 65 1555 1555 1.33 LINK C MSE A 65 N LEU A 66 1555 1555 1.33 LINK C THR A 148 N MSE A 149 1555 1555 1.33 LINK C MSE A 149 N PRO A 150 1555 1555 1.34 LINK C SER A 219 N MSE A 220 1555 1555 1.34 LINK C MSE A 220 N GLY A 221 1555 1555 1.33 LINK C VAL A 229 N MSE A 230 1555 1555 1.33 LINK C MSE A 230 N GLY A 231 1555 1555 1.33 LINK C ASN A 258 N MSE A 259 1555 1555 1.33 LINK C MSE A 259 N LEU A 260 1555 1555 1.33 LINK C ASP A 274 N MSE A 275 1555 1555 1.33 LINK C MSE A 275 N ARG A 276 1555 1555 1.33 LINK C TYR A 307 N MSE A 308 1555 1555 1.33 LINK C MSE A 308 N ILE A 309 1555 1555 1.33 LINK C PHE A 343 N MSE A 344 1555 1555 1.33 LINK C MSE A 344 N ILE A 345 1555 1555 1.33 LINK C ILE A 365 N MSE A 366 1555 1555 1.33 LINK C MSE A 366 N VAL A 367 1555 1555 1.32 LINK C LEU A 374 N MSE A 375 1555 1555 1.33 LINK C MSE A 375 N ILE A 376 1555 1555 1.33 LINK C MSE B 1 N SER B 2 1555 1555 1.33 LINK C GLU B 64 N MSE B 65 1555 1555 1.33 LINK C MSE B 65 N LEU B 66 1555 1555 1.33 LINK C THR B 148 N MSE B 149 1555 1555 1.33 LINK C MSE B 149 N PRO B 150 1555 1555 1.34 LINK C SER B 219 N MSE B 220 1555 1555 1.33 LINK C MSE B 220 N GLY B 221 1555 1555 1.33 LINK C VAL B 229 N MSE B 230 1555 1555 1.33 LINK C MSE B 230 N GLY B 231 1555 1555 1.33 LINK C ASN B 258 N MSE B 259 1555 1555 1.33 LINK C MSE B 259 N LEU B 260 1555 1555 1.33 LINK C ASP B 274 N MSE B 275 1555 1555 1.33 LINK C MSE B 275 N ARG B 276 1555 1555 1.33 LINK C TYR B 307 N MSE B 308 1555 1555 1.33 LINK C MSE B 308 N AILE B 309 1555 1555 1.32 LINK C MSE B 308 N BILE B 309 1555 1555 1.33 LINK C PHE B 343 N MSE B 344 1555 1555 1.33 LINK C MSE B 344 N ILE B 345 1555 1555 1.33 LINK C ILE B 365 N MSE B 366 1555 1555 1.32 LINK C MSE B 366 N VAL B 367 1555 1555 1.33 LINK C LEU B 374 N MSE B 375 1555 1555 1.33 LINK C MSE B 375 N ILE B 376 1555 1555 1.33 CRYST1 67.079 87.127 149.661 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014908 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011477 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006682 0.00000 HETATM 1 N MSE A 1 60.054 40.281 71.939 1.00 66.23 N HETATM 2 CA MSE A 1 59.627 39.422 70.836 1.00 67.59 C HETATM 3 C MSE A 1 58.643 38.336 71.267 1.00 63.11 C HETATM 4 O MSE A 1 57.981 37.716 70.430 1.00 55.75 O HETATM 5 CB MSE A 1 60.837 38.787 70.149 1.00 76.34 C HETATM 6 CG MSE A 1 61.390 39.617 69.000 1.00 82.40 C HETATM 7 SE MSE A 1 60.224 39.623 67.427 1.00176.86 SE HETATM 8 CE MSE A 1 60.909 38.030 66.528 1.00 97.88 C