data_3KK9 # _entry.id 3KK9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.350 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3KK9 pdb_00003kk9 10.2210/pdb3kk9/pdb RCSB RCSB056096 ? ? WWPDB D_1000056096 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3KK8 . unspecified PDB 3KL8 . unspecified # _pdbx_database_status.entry_id 3KK9 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-11-04 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kuriyan, J.' 1 'Chao, L.H.' 2 'Pellicena, P.' 3 'Deindl, S.' 4 'Barclay, L.A.' 5 'Schulman, H.' 6 # _citation.id primary _citation.title 'Intersubunit capture of regulatory segments is a component of cooperative CaMKII activation.' _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_volume 17 _citation.page_first 264 _citation.page_last 272 _citation.year 2010 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1545-9993 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20139983 _citation.pdbx_database_id_DOI 10.1038/nsmb.1751 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chao, L.H.' 1 ? primary 'Pellicena, P.' 2 ? primary 'Deindl, S.' 3 ? primary 'Barclay, L.A.' 4 ? primary 'Schulman, H.' 5 ? primary 'Kuriyan, J.' 6 ? # _cell.length_a 37.708 _cell.length_b 60.470 _cell.length_c 70.243 _cell.angle_alpha 90.000 _cell.angle_beta 93.920 _cell.angle_gamma 90.000 _cell.entry_id 3KK9 _cell.pdbx_unique_axis ? _cell.Z_PDB 2 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.entry_id 3KK9 _symmetry.Int_Tables_number 4 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Calcium/calmodulin dependent protein kinase II' _entity.formula_weight 32003.350 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'CaMKII kinase domain' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSL IDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQD(TPO)VDC ; _entity_poly.pdbx_seq_one_letter_code_can ;TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSL IDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDC ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 LYS n 1 3 PHE n 1 4 SER n 1 5 ASP n 1 6 ASN n 1 7 TYR n 1 8 ASP n 1 9 VAL n 1 10 LYS n 1 11 GLU n 1 12 GLU n 1 13 LEU n 1 14 GLY n 1 15 LYS n 1 16 GLY n 1 17 ALA n 1 18 PHE n 1 19 SER n 1 20 VAL n 1 21 VAL n 1 22 ARG n 1 23 ARG n 1 24 CYS n 1 25 VAL n 1 26 HIS n 1 27 LYS n 1 28 THR n 1 29 THR n 1 30 GLY n 1 31 LEU n 1 32 GLU n 1 33 PHE n 1 34 ALA n 1 35 ALA n 1 36 LYS n 1 37 ILE n 1 38 ILE n 1 39 ASN n 1 40 THR n 1 41 LYS n 1 42 LYS n 1 43 LEU n 1 44 SER n 1 45 ALA n 1 46 ARG n 1 47 ASP n 1 48 PHE n 1 49 GLN n 1 50 LYS n 1 51 LEU n 1 52 GLU n 1 53 ARG n 1 54 GLU n 1 55 ALA n 1 56 ARG n 1 57 ILE n 1 58 CYS n 1 59 ARG n 1 60 LYS n 1 61 LEU n 1 62 GLN n 1 63 HIS n 1 64 PRO n 1 65 ASN n 1 66 ILE n 1 67 VAL n 1 68 ARG n 1 69 LEU n 1 70 HIS n 1 71 ASP n 1 72 SER n 1 73 ILE n 1 74 GLN n 1 75 GLU n 1 76 GLU n 1 77 SER n 1 78 PHE n 1 79 HIS n 1 80 TYR n 1 81 LEU n 1 82 VAL n 1 83 PHE n 1 84 ASP n 1 85 LEU n 1 86 VAL n 1 87 THR n 1 88 GLY n 1 89 GLY n 1 90 GLU n 1 91 LEU n 1 92 PHE n 1 93 GLU n 1 94 ASP n 1 95 ILE n 1 96 VAL n 1 97 ALA n 1 98 ARG n 1 99 GLU n 1 100 PHE n 1 101 TYR n 1 102 SER n 1 103 GLU n 1 104 ALA n 1 105 ASP n 1 106 ALA n 1 107 SER n 1 108 HIS n 1 109 CYS n 1 110 ILE n 1 111 GLN n 1 112 GLN n 1 113 ILE n 1 114 LEU n 1 115 GLU n 1 116 SER n 1 117 ILE n 1 118 ALA n 1 119 TYR n 1 120 CYS n 1 121 HIS n 1 122 SER n 1 123 ASN n 1 124 GLY n 1 125 ILE n 1 126 VAL n 1 127 HIS n 1 128 ARG n 1 129 ASN n 1 130 LEU n 1 131 LYS n 1 132 PRO n 1 133 GLU n 1 134 ASN n 1 135 LEU n 1 136 LEU n 1 137 LEU n 1 138 ALA n 1 139 SER n 1 140 LYS n 1 141 ALA n 1 142 LYS n 1 143 GLY n 1 144 ALA n 1 145 ALA n 1 146 VAL n 1 147 LYS n 1 148 LEU n 1 149 ALA n 1 150 ASP n 1 151 PHE n 1 152 GLY n 1 153 LEU n 1 154 ALA n 1 155 ILE n 1 156 GLU n 1 157 VAL n 1 158 ASN n 1 159 ASP n 1 160 SER n 1 161 GLU n 1 162 ALA n 1 163 TRP n 1 164 HIS n 1 165 GLY n 1 166 PHE n 1 167 ALA n 1 168 GLY n 1 169 THR n 1 170 PRO n 1 171 GLY n 1 172 TYR n 1 173 LEU n 1 174 SER n 1 175 PRO n 1 176 GLU n 1 177 VAL n 1 178 LEU n 1 179 LYS n 1 180 LYS n 1 181 ASP n 1 182 PRO n 1 183 TYR n 1 184 SER n 1 185 LYS n 1 186 PRO n 1 187 VAL n 1 188 ASP n 1 189 ILE n 1 190 TRP n 1 191 ALA n 1 192 CYS n 1 193 GLY n 1 194 VAL n 1 195 ILE n 1 196 LEU n 1 197 TYR n 1 198 ILE n 1 199 LEU n 1 200 LEU n 1 201 VAL n 1 202 GLY n 1 203 TYR n 1 204 PRO n 1 205 PRO n 1 206 PHE n 1 207 TRP n 1 208 ASP n 1 209 GLU n 1 210 ASP n 1 211 GLN n 1 212 HIS n 1 213 ARG n 1 214 LEU n 1 215 TYR n 1 216 ALA n 1 217 GLN n 1 218 ILE n 1 219 LYS n 1 220 ALA n 1 221 GLY n 1 222 ALA n 1 223 TYR n 1 224 ASP n 1 225 TYR n 1 226 PRO n 1 227 SER n 1 228 PRO n 1 229 GLU n 1 230 TRP n 1 231 ASP n 1 232 THR n 1 233 VAL n 1 234 THR n 1 235 PRO n 1 236 GLU n 1 237 ALA n 1 238 LYS n 1 239 SER n 1 240 LEU n 1 241 ILE n 1 242 ASP n 1 243 SER n 1 244 MET n 1 245 LEU n 1 246 THR n 1 247 VAL n 1 248 ASN n 1 249 PRO n 1 250 LYS n 1 251 LYS n 1 252 ARG n 1 253 ILE n 1 254 THR n 1 255 ALA n 1 256 ASP n 1 257 GLN n 1 258 ALA n 1 259 LEU n 1 260 LYS n 1 261 VAL n 1 262 PRO n 1 263 TRP n 1 264 ILE n 1 265 CYS n 1 266 ASN n 1 267 ARG n 1 268 GLU n 1 269 ARG n 1 270 VAL n 1 271 ALA n 1 272 SER n 1 273 ALA n 1 274 ILE n 1 275 HIS n 1 276 ARG n 1 277 GLN n 1 278 ASP n 1 279 TPO n 1 280 VAL n 1 281 ASP n 1 282 CYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name nematode _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'unc-43, K11E8.1, K11E8.1d' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Caenorhabditis elegans' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 6239 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9U6Q0_CAEEL _struct_ref.pdbx_db_accession Q9U6Q0 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDS EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSL IDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDC ; _struct_ref.pdbx_align_begin 6 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3KK9 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 282 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9U6Q0 _struct_ref_seq.db_align_beg 6 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 287 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 7 _struct_ref_seq.pdbx_auth_seq_align_end 288 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3KK9 _struct_ref_seq_dif.mon_id ASN _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 129 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q9U6Q0 _struct_ref_seq_dif.db_mon_id ASP _struct_ref_seq_dif.pdbx_seq_db_seq_num 134 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 135 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TPO 'L-peptide linking' n PHOSPHOTHREONINE PHOSPHONOTHREONINE 'C4 H10 N O6 P' 199.099 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3KK9 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.50 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 50.73 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details ;15% 2-methyl-2,4-pentanediol, .1M potassium chloride, 5mM magnesium suflate, 50mM 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid, pH 7.0, VAPOR DIFFUSION, temperature 293K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2008-04-24 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength .9537 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.2.2' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list .9537 _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.2.2 # _reflns.entry_id 3KK9 _reflns.observed_criterion_sigma_F 2.0 _reflns.observed_criterion_sigma_I 2.0 _reflns.d_resolution_high 3.2 _reflns.d_resolution_low 50.00 _reflns.number_all 5292 _reflns.number_obs 5171 _reflns.percent_possible_obs 97.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.127 _reflns.pdbx_netI_over_sigmaI 9.93 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 3.2 _reflns_shell.d_res_low 3.31 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 87.7 _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_obs 2.3 _reflns_shell.pdbx_Rsym_value 0.399 _reflns_shell.pdbx_redundancy 3.1 _reflns_shell.number_unique_all 463 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3KK9 _refine.ls_d_res_high 3.206 _refine.ls_d_res_low 45.782 _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 97.500 _refine.ls_number_reflns_obs 5153 _refine.ls_number_reflns_all 5292 _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.272 _refine.ls_R_factor_R_work 0.270 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.329 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.580 _refine.ls_number_reflns_R_free 236 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 91.219 _refine.solvent_model_param_bsol 63.034 _refine.solvent_model_param_ksol 0.286 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 65.114 _refine.aniso_B[2][2] -37.622 _refine.aniso_B[3][3] -27.492 _refine.aniso_B[1][2] -0.000 _refine.aniso_B[1][3] 17.363 _refine.aniso_B[2][3] -0.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.760 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.110 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.900 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.680 _refine.B_iso_max 195.44 _refine.B_iso_min 57.85 _refine.occupancy_max 1.00 _refine.occupancy_min 1.00 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2204 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2204 _refine_hist.d_res_high 3.206 _refine_hist.d_res_low 45.782 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 2257 0.004 ? ? 'X-RAY DIFFRACTION' ? f_angle_d 3062 0.798 ? ? 'X-RAY DIFFRACTION' ? f_chiral_restr 336 0.053 ? ? 'X-RAY DIFFRACTION' ? f_plane_restr 392 0.003 ? ? 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 817 15.927 ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 3.206 4.038 2 95.000 2378 . 0.310 0.386 . 117 . 2495 . . 'X-RAY DIFFRACTION' 4.038 45.787 2 100.000 2539 . 0.249 0.299 . 119 . 2658 . . 'X-RAY DIFFRACTION' # _struct.entry_id 3KK9 _struct.title 'CaMKII Substrate Complex B' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3KK9 _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'CaMKII, ATP-binding, Kinase, Nucleotide-binding, Serine/threonine-protein kinase, TRANSFERASE' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 2 ? ASN A 6 ? LYS A 8 ASN A 12 1 ? 5 HELX_P HELX_P2 2 SER A 44 ? LEU A 61 ? SER A 50 LEU A 67 1 ? 18 HELX_P HELX_P3 3 GLU A 90 ? GLU A 99 ? GLU A 96 GLU A 105 1 ? 10 HELX_P HELX_P4 4 SER A 102 ? ASN A 123 ? SER A 108 ASN A 129 1 ? 22 HELX_P HELX_P5 5 THR A 169 ? LEU A 173 ? THR A 175 LEU A 179 5 ? 5 HELX_P HELX_P6 6 SER A 174 ? LYS A 179 ? SER A 180 LYS A 185 1 ? 6 HELX_P HELX_P7 7 LYS A 185 ? GLY A 202 ? LYS A 191 GLY A 208 1 ? 18 HELX_P HELX_P8 8 ASP A 210 ? GLY A 221 ? ASP A 216 GLY A 227 1 ? 12 HELX_P HELX_P9 9 PRO A 228 ? THR A 232 ? PRO A 234 THR A 238 5 ? 5 HELX_P HELX_P10 10 THR A 234 ? LEU A 245 ? THR A 240 LEU A 251 1 ? 12 HELX_P HELX_P11 11 THR A 254 ? LEU A 259 ? THR A 260 LEU A 265 1 ? 6 HELX_P HELX_P12 12 VAL A 261 ? ASN A 266 ? VAL A 267 ASN A 272 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ASP 278 C ? ? ? 1_555 A TPO 279 N ? ? A ASP 284 A TPO 285 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale2 covale both ? A TPO 279 C ? ? ? 1_555 A VAL 280 N ? ? A TPO 285 A VAL 286 1_555 ? ? ? ? ? ? ? 1.329 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 227 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 233 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 228 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 234 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 3.22 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 7 ? GLY A 16 ? TYR A 13 GLY A 22 A 2 SER A 19 ? HIS A 26 ? SER A 25 HIS A 32 A 3 GLU A 32 ? ASN A 39 ? GLU A 38 ASN A 45 A 4 PHE A 78 ? ASP A 84 ? PHE A 84 ASP A 90 A 5 LEU A 69 ? GLU A 75 ? LEU A 75 GLU A 81 B 1 ILE A 125 ? VAL A 126 ? ILE A 131 VAL A 132 B 2 ILE A 155 ? GLU A 156 ? ILE A 161 GLU A 162 C 1 LEU A 135 ? LEU A 137 ? LEU A 141 LEU A 143 C 2 VAL A 146 ? LEU A 148 ? VAL A 152 LEU A 154 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 10 ? N LYS A 16 O ARG A 23 ? O ARG A 29 A 2 3 N CYS A 24 ? N CYS A 30 O PHE A 33 ? O PHE A 39 A 3 4 N ALA A 34 ? N ALA A 40 O PHE A 83 ? O PHE A 89 A 4 5 O VAL A 82 ? O VAL A 88 N HIS A 70 ? N HIS A 76 B 1 2 N VAL A 126 ? N VAL A 132 O ILE A 155 ? O ILE A 161 C 1 2 N LEU A 136 ? N LEU A 142 O LYS A 147 ? O LYS A 153 # _atom_sites.entry_id 3KK9 _atom_sites.fract_transf_matrix[1][1] 0.026520 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001819 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016537 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014270 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 7 7 THR THR A . n A 1 2 LYS 2 8 8 LYS LYS A . n A 1 3 PHE 3 9 9 PHE PHE A . n A 1 4 SER 4 10 10 SER SER A . n A 1 5 ASP 5 11 11 ASP ASP A . n A 1 6 ASN 6 12 12 ASN ASN A . n A 1 7 TYR 7 13 13 TYR TYR A . n A 1 8 ASP 8 14 14 ASP ASP A . n A 1 9 VAL 9 15 15 VAL VAL A . n A 1 10 LYS 10 16 16 LYS LYS A . n A 1 11 GLU 11 17 17 GLU GLU A . n A 1 12 GLU 12 18 18 GLU GLU A . n A 1 13 LEU 13 19 19 LEU LEU A . n A 1 14 GLY 14 20 20 GLY GLY A . n A 1 15 LYS 15 21 21 LYS LYS A . n A 1 16 GLY 16 22 22 GLY GLY A . n A 1 17 ALA 17 23 23 ALA ALA A . n A 1 18 PHE 18 24 24 PHE PHE A . n A 1 19 SER 19 25 25 SER SER A . n A 1 20 VAL 20 26 26 VAL VAL A . n A 1 21 VAL 21 27 27 VAL VAL A . n A 1 22 ARG 22 28 28 ARG ARG A . n A 1 23 ARG 23 29 29 ARG ARG A . n A 1 24 CYS 24 30 30 CYS CYS A . n A 1 25 VAL 25 31 31 VAL VAL A . n A 1 26 HIS 26 32 32 HIS HIS A . n A 1 27 LYS 27 33 33 LYS LYS A . n A 1 28 THR 28 34 34 THR THR A . n A 1 29 THR 29 35 35 THR THR A . n A 1 30 GLY 30 36 36 GLY GLY A . n A 1 31 LEU 31 37 37 LEU LEU A . n A 1 32 GLU 32 38 38 GLU GLU A . n A 1 33 PHE 33 39 39 PHE PHE A . n A 1 34 ALA 34 40 40 ALA ALA A . n A 1 35 ALA 35 41 41 ALA ALA A . n A 1 36 LYS 36 42 42 LYS LYS A . n A 1 37 ILE 37 43 43 ILE ILE A . n A 1 38 ILE 38 44 44 ILE ILE A . n A 1 39 ASN 39 45 45 ASN ASN A . n A 1 40 THR 40 46 46 THR THR A . n A 1 41 LYS 41 47 47 LYS LYS A . n A 1 42 LYS 42 48 48 LYS LYS A . n A 1 43 LEU 43 49 49 LEU LEU A . n A 1 44 SER 44 50 50 SER SER A . n A 1 45 ALA 45 51 51 ALA ALA A . n A 1 46 ARG 46 52 52 ARG ARG A . n A 1 47 ASP 47 53 53 ASP ASP A . n A 1 48 PHE 48 54 54 PHE PHE A . n A 1 49 GLN 49 55 55 GLN GLN A . n A 1 50 LYS 50 56 56 LYS LYS A . n A 1 51 LEU 51 57 57 LEU LEU A . n A 1 52 GLU 52 58 58 GLU GLU A . n A 1 53 ARG 53 59 59 ARG ARG A . n A 1 54 GLU 54 60 60 GLU GLU A . n A 1 55 ALA 55 61 61 ALA ALA A . n A 1 56 ARG 56 62 62 ARG ARG A . n A 1 57 ILE 57 63 63 ILE ILE A . n A 1 58 CYS 58 64 64 CYS CYS A . n A 1 59 ARG 59 65 65 ARG ARG A . n A 1 60 LYS 60 66 66 LYS LYS A . n A 1 61 LEU 61 67 67 LEU LEU A . n A 1 62 GLN 62 68 68 GLN GLN A . n A 1 63 HIS 63 69 69 HIS HIS A . n A 1 64 PRO 64 70 70 PRO PRO A . n A 1 65 ASN 65 71 71 ASN ASN A . n A 1 66 ILE 66 72 72 ILE ILE A . n A 1 67 VAL 67 73 73 VAL VAL A . n A 1 68 ARG 68 74 74 ARG ARG A . n A 1 69 LEU 69 75 75 LEU LEU A . n A 1 70 HIS 70 76 76 HIS HIS A . n A 1 71 ASP 71 77 77 ASP ASP A . n A 1 72 SER 72 78 78 SER SER A . n A 1 73 ILE 73 79 79 ILE ILE A . n A 1 74 GLN 74 80 80 GLN GLN A . n A 1 75 GLU 75 81 81 GLU GLU A . n A 1 76 GLU 76 82 82 GLU GLU A . n A 1 77 SER 77 83 83 SER SER A . n A 1 78 PHE 78 84 84 PHE PHE A . n A 1 79 HIS 79 85 85 HIS HIS A . n A 1 80 TYR 80 86 86 TYR TYR A . n A 1 81 LEU 81 87 87 LEU LEU A . n A 1 82 VAL 82 88 88 VAL VAL A . n A 1 83 PHE 83 89 89 PHE PHE A . n A 1 84 ASP 84 90 90 ASP ASP A . n A 1 85 LEU 85 91 91 LEU LEU A . n A 1 86 VAL 86 92 92 VAL VAL A . n A 1 87 THR 87 93 93 THR THR A . n A 1 88 GLY 88 94 94 GLY GLY A . n A 1 89 GLY 89 95 95 GLY GLY A . n A 1 90 GLU 90 96 96 GLU GLU A . n A 1 91 LEU 91 97 97 LEU LEU A . n A 1 92 PHE 92 98 98 PHE PHE A . n A 1 93 GLU 93 99 99 GLU GLU A . n A 1 94 ASP 94 100 100 ASP ASP A . n A 1 95 ILE 95 101 101 ILE ILE A . n A 1 96 VAL 96 102 102 VAL VAL A . n A 1 97 ALA 97 103 103 ALA ALA A . n A 1 98 ARG 98 104 104 ARG ARG A . n A 1 99 GLU 99 105 105 GLU GLU A . n A 1 100 PHE 100 106 106 PHE PHE A . n A 1 101 TYR 101 107 107 TYR TYR A . n A 1 102 SER 102 108 108 SER SER A . n A 1 103 GLU 103 109 109 GLU GLU A . n A 1 104 ALA 104 110 110 ALA ALA A . n A 1 105 ASP 105 111 111 ASP ASP A . n A 1 106 ALA 106 112 112 ALA ALA A . n A 1 107 SER 107 113 113 SER SER A . n A 1 108 HIS 108 114 114 HIS HIS A . n A 1 109 CYS 109 115 115 CYS CYS A . n A 1 110 ILE 110 116 116 ILE ILE A . n A 1 111 GLN 111 117 117 GLN GLN A . n A 1 112 GLN 112 118 118 GLN GLN A . n A 1 113 ILE 113 119 119 ILE ILE A . n A 1 114 LEU 114 120 120 LEU LEU A . n A 1 115 GLU 115 121 121 GLU GLU A . n A 1 116 SER 116 122 122 SER SER A . n A 1 117 ILE 117 123 123 ILE ILE A . n A 1 118 ALA 118 124 124 ALA ALA A . n A 1 119 TYR 119 125 125 TYR TYR A . n A 1 120 CYS 120 126 126 CYS CYS A . n A 1 121 HIS 121 127 127 HIS HIS A . n A 1 122 SER 122 128 128 SER SER A . n A 1 123 ASN 123 129 129 ASN ASN A . n A 1 124 GLY 124 130 130 GLY GLY A . n A 1 125 ILE 125 131 131 ILE ILE A . n A 1 126 VAL 126 132 132 VAL VAL A . n A 1 127 HIS 127 133 133 HIS HIS A . n A 1 128 ARG 128 134 134 ARG ARG A . n A 1 129 ASN 129 135 135 ASN ASN A . n A 1 130 LEU 130 136 136 LEU LEU A . n A 1 131 LYS 131 137 137 LYS LYS A . n A 1 132 PRO 132 138 138 PRO PRO A . n A 1 133 GLU 133 139 139 GLU GLU A . n A 1 134 ASN 134 140 140 ASN ASN A . n A 1 135 LEU 135 141 141 LEU LEU A . n A 1 136 LEU 136 142 142 LEU LEU A . n A 1 137 LEU 137 143 143 LEU LEU A . n A 1 138 ALA 138 144 144 ALA ALA A . n A 1 139 SER 139 145 145 SER SER A . n A 1 140 LYS 140 146 146 LYS LYS A . n A 1 141 ALA 141 147 147 ALA ALA A . n A 1 142 LYS 142 148 148 LYS LYS A . n A 1 143 GLY 143 149 149 GLY GLY A . n A 1 144 ALA 144 150 150 ALA ALA A . n A 1 145 ALA 145 151 151 ALA ALA A . n A 1 146 VAL 146 152 152 VAL VAL A . n A 1 147 LYS 147 153 153 LYS LYS A . n A 1 148 LEU 148 154 154 LEU LEU A . n A 1 149 ALA 149 155 155 ALA ALA A . n A 1 150 ASP 150 156 156 ASP ASP A . n A 1 151 PHE 151 157 157 PHE PHE A . n A 1 152 GLY 152 158 158 GLY GLY A . n A 1 153 LEU 153 159 159 LEU LEU A . n A 1 154 ALA 154 160 160 ALA ALA A . n A 1 155 ILE 155 161 161 ILE ILE A . n A 1 156 GLU 156 162 162 GLU GLU A . n A 1 157 VAL 157 163 163 VAL VAL A . n A 1 158 ASN 158 164 164 ASN ASN A . n A 1 159 ASP 159 165 165 ASP ASP A . n A 1 160 SER 160 166 166 SER SER A . n A 1 161 GLU 161 167 167 GLU GLU A . n A 1 162 ALA 162 168 168 ALA ALA A . n A 1 163 TRP 163 169 169 TRP TRP A . n A 1 164 HIS 164 170 170 HIS HIS A . n A 1 165 GLY 165 171 171 GLY GLY A . n A 1 166 PHE 166 172 172 PHE PHE A . n A 1 167 ALA 167 173 173 ALA ALA A . n A 1 168 GLY 168 174 174 GLY GLY A . n A 1 169 THR 169 175 175 THR THR A . n A 1 170 PRO 170 176 176 PRO PRO A . n A 1 171 GLY 171 177 177 GLY GLY A . n A 1 172 TYR 172 178 178 TYR TYR A . n A 1 173 LEU 173 179 179 LEU LEU A . n A 1 174 SER 174 180 180 SER SER A . n A 1 175 PRO 175 181 181 PRO PRO A . n A 1 176 GLU 176 182 182 GLU GLU A . n A 1 177 VAL 177 183 183 VAL VAL A . n A 1 178 LEU 178 184 184 LEU LEU A . n A 1 179 LYS 179 185 185 LYS LYS A . n A 1 180 LYS 180 186 186 LYS LYS A . n A 1 181 ASP 181 187 187 ASP ASP A . n A 1 182 PRO 182 188 188 PRO PRO A . n A 1 183 TYR 183 189 189 TYR TYR A . n A 1 184 SER 184 190 190 SER SER A . n A 1 185 LYS 185 191 191 LYS LYS A . n A 1 186 PRO 186 192 192 PRO PRO A . n A 1 187 VAL 187 193 193 VAL VAL A . n A 1 188 ASP 188 194 194 ASP ASP A . n A 1 189 ILE 189 195 195 ILE ILE A . n A 1 190 TRP 190 196 196 TRP TRP A . n A 1 191 ALA 191 197 197 ALA ALA A . n A 1 192 CYS 192 198 198 CYS CYS A . n A 1 193 GLY 193 199 199 GLY GLY A . n A 1 194 VAL 194 200 200 VAL VAL A . n A 1 195 ILE 195 201 201 ILE ILE A . n A 1 196 LEU 196 202 202 LEU LEU A . n A 1 197 TYR 197 203 203 TYR TYR A . n A 1 198 ILE 198 204 204 ILE ILE A . n A 1 199 LEU 199 205 205 LEU LEU A . n A 1 200 LEU 200 206 206 LEU LEU A . n A 1 201 VAL 201 207 207 VAL VAL A . n A 1 202 GLY 202 208 208 GLY GLY A . n A 1 203 TYR 203 209 209 TYR TYR A . n A 1 204 PRO 204 210 210 PRO PRO A . n A 1 205 PRO 205 211 211 PRO PRO A . n A 1 206 PHE 206 212 212 PHE PHE A . n A 1 207 TRP 207 213 213 TRP TRP A . n A 1 208 ASP 208 214 214 ASP ASP A . n A 1 209 GLU 209 215 215 GLU GLU A . n A 1 210 ASP 210 216 216 ASP ASP A . n A 1 211 GLN 211 217 217 GLN GLN A . n A 1 212 HIS 212 218 218 HIS HIS A . n A 1 213 ARG 213 219 219 ARG ARG A . n A 1 214 LEU 214 220 220 LEU LEU A . n A 1 215 TYR 215 221 221 TYR TYR A . n A 1 216 ALA 216 222 222 ALA ALA A . n A 1 217 GLN 217 223 223 GLN GLN A . n A 1 218 ILE 218 224 224 ILE ILE A . n A 1 219 LYS 219 225 225 LYS LYS A . n A 1 220 ALA 220 226 226 ALA ALA A . n A 1 221 GLY 221 227 227 GLY GLY A . n A 1 222 ALA 222 228 228 ALA ALA A . n A 1 223 TYR 223 229 229 TYR TYR A . n A 1 224 ASP 224 230 230 ASP ASP A . n A 1 225 TYR 225 231 231 TYR TYR A . n A 1 226 PRO 226 232 232 PRO PRO A . n A 1 227 SER 227 233 233 SER SER A . n A 1 228 PRO 228 234 234 PRO PRO A . n A 1 229 GLU 229 235 235 GLU GLU A . n A 1 230 TRP 230 236 236 TRP TRP A . n A 1 231 ASP 231 237 237 ASP ASP A . n A 1 232 THR 232 238 238 THR THR A . n A 1 233 VAL 233 239 239 VAL VAL A . n A 1 234 THR 234 240 240 THR THR A . n A 1 235 PRO 235 241 241 PRO PRO A . n A 1 236 GLU 236 242 242 GLU GLU A . n A 1 237 ALA 237 243 243 ALA ALA A . n A 1 238 LYS 238 244 244 LYS LYS A . n A 1 239 SER 239 245 245 SER SER A . n A 1 240 LEU 240 246 246 LEU LEU A . n A 1 241 ILE 241 247 247 ILE ILE A . n A 1 242 ASP 242 248 248 ASP ASP A . n A 1 243 SER 243 249 249 SER SER A . n A 1 244 MET 244 250 250 MET MET A . n A 1 245 LEU 245 251 251 LEU LEU A . n A 1 246 THR 246 252 252 THR THR A . n A 1 247 VAL 247 253 253 VAL VAL A . n A 1 248 ASN 248 254 254 ASN ASN A . n A 1 249 PRO 249 255 255 PRO PRO A . n A 1 250 LYS 250 256 256 LYS LYS A . n A 1 251 LYS 251 257 257 LYS LYS A . n A 1 252 ARG 252 258 258 ARG ARG A . n A 1 253 ILE 253 259 259 ILE ILE A . n A 1 254 THR 254 260 260 THR THR A . n A 1 255 ALA 255 261 261 ALA ALA A . n A 1 256 ASP 256 262 262 ASP ASP A . n A 1 257 GLN 257 263 263 GLN GLN A . n A 1 258 ALA 258 264 264 ALA ALA A . n A 1 259 LEU 259 265 265 LEU LEU A . n A 1 260 LYS 260 266 266 LYS LYS A . n A 1 261 VAL 261 267 267 VAL VAL A . n A 1 262 PRO 262 268 268 PRO PRO A . n A 1 263 TRP 263 269 269 TRP TRP A . n A 1 264 ILE 264 270 270 ILE ILE A . n A 1 265 CYS 265 271 271 CYS CYS A . n A 1 266 ASN 266 272 272 ASN ASN A . n A 1 267 ARG 267 273 ? ? ? A . n A 1 268 GLU 268 274 ? ? ? A . n A 1 269 ARG 269 275 ? ? ? A . n A 1 270 VAL 270 276 ? ? ? A . n A 1 271 ALA 271 277 ? ? ? A . n A 1 272 SER 272 278 ? ? ? A . n A 1 273 ALA 273 279 279 ALA ALA A . n A 1 274 ILE 274 280 280 ILE ILE A . n A 1 275 HIS 275 281 281 HIS HIS A . n A 1 276 ARG 276 282 282 ARG ARG A . n A 1 277 GLN 277 283 283 GLN GLN A . n A 1 278 ASP 278 284 284 ASP ASP A . n A 1 279 TPO 279 285 285 TPO TPO A . n A 1 280 VAL 280 286 286 VAL VAL A . n A 1 281 ASP 281 287 287 ASP ASP A . n A 1 282 CYS 282 288 288 CYS CYS A . n # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id TPO _pdbx_struct_mod_residue.label_seq_id 279 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id TPO _pdbx_struct_mod_residue.auth_seq_id 285 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id THR _pdbx_struct_mod_residue.details PHOSPHOTHREONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2 A 2 1 A # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 1_455 x-1,y,z 1.0000000000 0.0000000000 0.0000000000 -37.7080000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-02-09 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2021-10-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' struct_conn 3 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 3 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -13.7108 _pdbx_refine_tls.origin_y -16.3141 _pdbx_refine_tls.origin_z -19.2794 _pdbx_refine_tls.T[1][1] 0.0350 _pdbx_refine_tls.T[2][2] 0.3536 _pdbx_refine_tls.T[3][3] 0.2581 _pdbx_refine_tls.T[1][2] -0.0078 _pdbx_refine_tls.T[1][3] 0.0312 _pdbx_refine_tls.T[2][3] 0.0069 _pdbx_refine_tls.L[1][1] 1.1008 _pdbx_refine_tls.L[2][2] 3.1507 _pdbx_refine_tls.L[3][3] 2.2915 _pdbx_refine_tls.L[1][2] 0.0876 _pdbx_refine_tls.L[1][3] 0.4936 _pdbx_refine_tls.L[2][3] -0.3188 _pdbx_refine_tls.S[1][1] -0.1150 _pdbx_refine_tls.S[2][2] -0.0365 _pdbx_refine_tls.S[3][3] -0.0547 _pdbx_refine_tls.S[1][2] 0.4115 _pdbx_refine_tls.S[1][3] -0.1052 _pdbx_refine_tls.S[2][3] 0.0250 _pdbx_refine_tls.S[2][1] -0.1861 _pdbx_refine_tls.S[3][1] -0.2236 _pdbx_refine_tls.S[3][2] 0.1134 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 7 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 288 _pdbx_refine_tls_group.selection_details all _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? # _pdbx_phasing_MR.entry_id 3KK9 _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor 43.850 _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 3.210 _pdbx_phasing_MR.d_res_low_rotation 45.780 _pdbx_phasing_MR.d_res_high_translation 3.210 _pdbx_phasing_MR.d_res_low_translation 45.780 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 SCALA . ? other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 2 PHASER 2.1.1 'Thu Nov 22 16:35:27 2007' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 PHENIX . ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 4 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 HKL-2000 . ? ? ? ? 'data collection' ? ? ? 6 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 16 ? ? -112.45 -137.24 2 1 PHE A 24 ? ? 40.78 28.55 3 1 ALA A 61 ? ? -38.88 -70.56 4 1 VAL A 73 ? ? -39.85 104.83 5 1 GLU A 82 ? ? 56.84 -82.30 6 1 ASP A 90 ? ? -39.28 139.28 7 1 GLU A 105 ? ? 68.54 -56.19 8 1 SER A 108 ? ? -68.84 -177.08 9 1 ARG A 134 ? ? 79.26 -38.56 10 1 ASN A 135 ? ? -109.48 48.03 11 1 ALA A 144 ? ? -27.87 -50.69 12 1 ASP A 156 ? ? 46.02 74.17 13 1 ALA A 160 ? ? -39.97 140.03 14 1 ASN A 164 ? ? -97.83 -144.01 15 1 PRO A 176 ? ? -30.63 -76.69 16 1 SER A 190 ? ? -152.56 -145.17 17 1 VAL A 207 ? ? -142.38 -14.99 18 1 ASP A 214 ? ? 161.76 140.88 19 1 ASP A 230 ? ? -160.77 -163.44 20 1 GLU A 235 ? ? -29.13 -69.35 21 1 TRP A 236 ? ? -61.86 8.25 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ARG 273 ? A ARG 267 2 1 Y 1 A GLU 274 ? A GLU 268 3 1 Y 1 A ARG 275 ? A ARG 269 4 1 Y 1 A VAL 276 ? A VAL 270 5 1 Y 1 A ALA 277 ? A ALA 271 6 1 Y 1 A SER 278 ? A SER 272 #