data_3KKQ # _entry.id 3KKQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3KKQ pdb_00003kkq 10.2210/pdb3kkq/pdb RCSB RCSB056113 ? ? WWPDB D_1000056113 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1X1S . unspecified PDB 1X1R . unspecified PDB 3KKM . unspecified PDB 3KKN . unspecified PDB 3KKO . unspecified PDB 3KKP . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3KKQ _pdbx_database_status.recvd_initial_deposition_date 2009-11-06 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Muraoka, S.' 1 'Shima, F.' 2 'Liao, J.' 3 'Ijiri, Y.' 4 'Matsumoto, K.' 5 'Ye, M.' 6 'Inoue, T.' 7 'Kataoka, T.' 8 # _citation.id primary _citation.title 'Structural basis for conformational dynamics of GTP-bound Ras protein' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 285 _citation.page_first 22696 _citation.page_last 22705 _citation.year 2010 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20479006 _citation.pdbx_database_id_DOI 10.1074/jbc.M110.125161 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Shima, F.' 1 ? primary 'Ijiri, Y.' 2 ? primary 'Muraoka, S.' 3 ? primary 'Liao, J.' 4 ? primary 'Ye, M.' 5 ? primary 'Araki, M.' 6 ? primary 'Matsumoto, K.' 7 ? primary 'Yamamoto, N.' 8 ? primary 'Sugimoto, T.' 9 ? primary 'Yoshikawa, Y.' 10 ? primary 'Kumasaka, T.' 11 ? primary 'Yamamoto, M.' 12 ? primary 'Tamura, A.' 13 ? primary 'Kataoka, T.' 14 ? # _cell.entry_id 3KKQ _cell.length_a 64.947 _cell.length_b 70.754 _cell.length_c 43.445 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3KKQ _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ras-related protein M-Ras' 20854.705 1 ? P40D 'G domain, UNP residues 1-178' ? 2 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 water nat water 18.015 243 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Ras-related protein R-Ras3, Muscle and microspikes Ras, X-Ras' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPLGSMATSAVPSENLPTYKLVVVGDGGVGKSALTIQFFQKIFVDDYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEFS AMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKVTRDQGKEMATKYNIPYIET SAKDPPLNVDKTFHDLVRVIRQQ ; _entity_poly.pdbx_seq_one_letter_code_can ;GPLGSMATSAVPSENLPTYKLVVVGDGGVGKSALTIQFFQKIFVDDYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEFS AMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKVTRDQGKEMATKYNIPYIET SAKDPPLNVDKTFHDLVRVIRQQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 MET n 1 7 ALA n 1 8 THR n 1 9 SER n 1 10 ALA n 1 11 VAL n 1 12 PRO n 1 13 SER n 1 14 GLU n 1 15 ASN n 1 16 LEU n 1 17 PRO n 1 18 THR n 1 19 TYR n 1 20 LYS n 1 21 LEU n 1 22 VAL n 1 23 VAL n 1 24 VAL n 1 25 GLY n 1 26 ASP n 1 27 GLY n 1 28 GLY n 1 29 VAL n 1 30 GLY n 1 31 LYS n 1 32 SER n 1 33 ALA n 1 34 LEU n 1 35 THR n 1 36 ILE n 1 37 GLN n 1 38 PHE n 1 39 PHE n 1 40 GLN n 1 41 LYS n 1 42 ILE n 1 43 PHE n 1 44 VAL n 1 45 ASP n 1 46 ASP n 1 47 TYR n 1 48 ASP n 1 49 PRO n 1 50 THR n 1 51 ILE n 1 52 GLU n 1 53 ASP n 1 54 SER n 1 55 TYR n 1 56 LEU n 1 57 LYS n 1 58 HIS n 1 59 THR n 1 60 GLU n 1 61 ILE n 1 62 ASP n 1 63 ASN n 1 64 GLN n 1 65 TRP n 1 66 ALA n 1 67 ILE n 1 68 LEU n 1 69 ASP n 1 70 VAL n 1 71 LEU n 1 72 ASP n 1 73 THR n 1 74 ALA n 1 75 GLY n 1 76 GLN n 1 77 GLU n 1 78 GLU n 1 79 PHE n 1 80 SER n 1 81 ALA n 1 82 MET n 1 83 ARG n 1 84 GLU n 1 85 GLN n 1 86 TYR n 1 87 MET n 1 88 ARG n 1 89 THR n 1 90 GLY n 1 91 ASP n 1 92 GLY n 1 93 PHE n 1 94 LEU n 1 95 ILE n 1 96 VAL n 1 97 TYR n 1 98 SER n 1 99 VAL n 1 100 THR n 1 101 ASP n 1 102 LYS n 1 103 ALA n 1 104 SER n 1 105 PHE n 1 106 GLU n 1 107 HIS n 1 108 VAL n 1 109 ASP n 1 110 ARG n 1 111 PHE n 1 112 HIS n 1 113 GLN n 1 114 LEU n 1 115 ILE n 1 116 LEU n 1 117 ARG n 1 118 VAL n 1 119 LYS n 1 120 ASP n 1 121 ARG n 1 122 GLU n 1 123 SER n 1 124 PHE n 1 125 PRO n 1 126 MET n 1 127 ILE n 1 128 LEU n 1 129 VAL n 1 130 ALA n 1 131 ASN n 1 132 LYS n 1 133 VAL n 1 134 ASP n 1 135 LEU n 1 136 MET n 1 137 HIS n 1 138 LEU n 1 139 ARG n 1 140 LYS n 1 141 VAL n 1 142 THR n 1 143 ARG n 1 144 ASP n 1 145 GLN n 1 146 GLY n 1 147 LYS n 1 148 GLU n 1 149 MET n 1 150 ALA n 1 151 THR n 1 152 LYS n 1 153 TYR n 1 154 ASN n 1 155 ILE n 1 156 PRO n 1 157 TYR n 1 158 ILE n 1 159 GLU n 1 160 THR n 1 161 SER n 1 162 ALA n 1 163 LYS n 1 164 ASP n 1 165 PRO n 1 166 PRO n 1 167 LEU n 1 168 ASN n 1 169 VAL n 1 170 ASP n 1 171 LYS n 1 172 THR n 1 173 PHE n 1 174 HIS n 1 175 ASP n 1 176 LEU n 1 177 VAL n 1 178 ARG n 1 179 VAL n 1 180 ILE n 1 181 ARG n 1 182 GLN n 1 183 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain AG-1 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX-6P-1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RASM_MOUSE _struct_ref.pdbx_db_accession O08989 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MATSAVPSENLPTYKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQ YMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKVTRDQGKEMATKYNIPYIETSAKDP PLNVDKTFHDLVRVIRQQ ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3KKQ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 6 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 183 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O08989 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 178 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 178 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3KKQ GLY A 1 ? UNP O08989 ? ? 'expression tag' -4 1 1 3KKQ PRO A 2 ? UNP O08989 ? ? 'expression tag' -3 2 1 3KKQ LEU A 3 ? UNP O08989 ? ? 'expression tag' -2 3 1 3KKQ GLY A 4 ? UNP O08989 ? ? 'expression tag' -1 4 1 3KKQ SER A 5 ? UNP O08989 ? ? 'expression tag' 0 5 1 3KKQ ASP A 45 ? UNP O08989 PRO 40 'engineered mutation' 40 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3KKQ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.39 _exptl_crystal.density_percent_sol 48.60 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pdbx_details 'PEG-4000, sodium acetate, ammonium acetate, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2005-05-21 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL41XU' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL41XU _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.8 # _reflns.entry_id 3KKQ _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 36.11 _reflns.d_resolution_high 1.20 _reflns.number_obs 62215 _reflns.number_all 62215 _reflns.percent_possible_obs 98.4 _reflns.pdbx_Rmerge_I_obs 0.060 _reflns.pdbx_Rsym_value 0.060 _reflns.pdbx_netI_over_sigmaI 8.4 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.20 _reflns_shell.d_res_low 1.26 _reflns_shell.percent_possible_all 97.3 _reflns_shell.Rmerge_I_obs 0.286 _reflns_shell.pdbx_Rsym_value 0.286 _reflns_shell.meanI_over_sigI_obs 2.6 _reflns_shell.pdbx_redundancy 7.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 8859 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3KKQ _refine.ls_number_reflns_obs 59019 _refine.ls_number_reflns_all 59019 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 29.51 _refine.ls_d_res_high 1.20 _refine.ls_percent_reflns_obs 98.18 _refine.ls_R_factor_obs 0.17658 _refine.ls_R_factor_all 0.17658 _refine.ls_R_factor_R_work 0.17576 _refine.ls_R_factor_R_free 0.19222 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 3159 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.961 _refine.correlation_coeff_Fo_to_Fc_free 0.953 _refine.B_iso_mean 10.329 _refine.aniso_B[1][1] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 1X1R' _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.038 _refine.pdbx_overall_ESU_R_Free 0.040 _refine.overall_SU_ML 0.022 _refine.overall_SU_B 0.466 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1387 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 29 _refine_hist.number_atoms_solvent 243 _refine_hist.number_atoms_total 1659 _refine_hist.d_res_high 1.20 _refine_hist.d_res_low 29.51 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.006 0.022 ? 1445 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.161 1.982 ? 1961 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.425 5.000 ? 169 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 36.544 24.444 ? 72 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.436 15.000 ? 256 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 16.952 15.000 ? 9 'X-RAY DIFFRACTION' ? r_chiral_restr 0.077 0.200 ? 218 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 1084 'X-RAY DIFFRACTION' ? r_nbd_refined 0.192 0.200 ? 678 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.311 0.200 ? 997 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.097 0.200 ? 185 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.155 0.200 ? 35 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.088 0.200 ? 22 'X-RAY DIFFRACTION' ? r_mcbond_it 0.610 1.500 ? 868 'X-RAY DIFFRACTION' ? r_mcangle_it 0.991 2.000 ? 1383 'X-RAY DIFFRACTION' ? r_scbond_it 1.457 3.000 ? 653 'X-RAY DIFFRACTION' ? r_scangle_it 2.137 4.500 ? 578 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.200 _refine_ls_shell.d_res_low 1.231 _refine_ls_shell.number_reflns_R_work 4202 _refine_ls_shell.R_factor_R_work 0.190 _refine_ls_shell.percent_reflns_obs 96.93 _refine_ls_shell.R_factor_R_free 0.199 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 254 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 4202 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3KKQ _struct.title 'Crystal structure of M-Ras P40D in complex with GDP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3KKQ _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text 'GTP-binding, GTPase, SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details 'AUTHOR DETERMINED BIOLOGICAL UNIT: UNKNOWN' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 30 ? LYS A 41 ? GLY A 25 LYS A 36 1 ? 12 HELX_P HELX_P2 2 GLN A 76 ? SER A 80 ? GLN A 71 SER A 75 5 ? 5 HELX_P HELX_P3 3 MET A 82 ? GLY A 90 ? MET A 77 GLY A 85 1 ? 9 HELX_P HELX_P4 4 ASP A 101 ? HIS A 107 ? ASP A 96 HIS A 102 1 ? 7 HELX_P HELX_P5 5 HIS A 107 ? ASP A 120 ? HIS A 102 ASP A 115 1 ? 14 HELX_P HELX_P6 6 THR A 142 ? ASN A 154 ? THR A 137 ASN A 149 1 ? 13 HELX_P HELX_P7 7 ASN A 168 ? GLN A 183 ? ASN A 163 GLN A 178 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A SER 32 OG ? ? ? 1_555 C MG . MG ? ? A SER 27 A MG 180 1_555 ? ? ? ? ? ? ? 2.078 ? ? metalc2 metalc ? ? B GDP . O2B ? ? ? 1_555 C MG . MG ? ? A GDP 179 A MG 180 1_555 ? ? ? ? ? ? ? 2.045 ? ? metalc3 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 180 A HOH 1001 1_555 ? ? ? ? ? ? ? 2.039 ? ? metalc4 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 180 A HOH 1002 1_555 ? ? ? ? ? ? ? 2.106 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 180 A HOH 1003 1_555 ? ? ? ? ? ? ? 2.067 ? ? metalc6 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 180 A HOH 1004 1_555 ? ? ? ? ? ? ? 2.097 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASP _struct_mon_prot_cis.label_seq_id 164 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASP _struct_mon_prot_cis.auth_seq_id 159 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 165 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 160 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -6.00 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASP A 53 ? ILE A 61 ? ASP A 48 ILE A 56 A 2 GLN A 64 ? ASP A 72 ? GLN A 59 ASP A 67 A 3 THR A 18 ? VAL A 24 ? THR A 13 VAL A 19 A 4 GLY A 92 ? SER A 98 ? GLY A 87 SER A 93 A 5 MET A 126 ? ASN A 131 ? MET A 121 ASN A 126 A 6 TYR A 157 ? THR A 160 ? TYR A 152 THR A 155 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 57 ? N LYS A 52 O LEU A 68 ? O LEU A 63 A 2 3 O ILE A 67 ? O ILE A 62 N TYR A 19 ? N TYR A 14 A 3 4 N VAL A 24 ? N VAL A 19 O VAL A 96 ? O VAL A 91 A 4 5 N TYR A 97 ? N TYR A 92 O ASN A 131 ? O ASN A 126 A 5 6 N ALA A 130 ? N ALA A 125 O ILE A 158 ? O ILE A 153 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GDP 179 ? 24 'BINDING SITE FOR RESIDUE GDP A 179' AC2 Software A MG 180 ? 6 'BINDING SITE FOR RESIDUE MG A 180' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 24 GLY A 28 ? GLY A 23 . ? 1_555 ? 2 AC1 24 VAL A 29 ? VAL A 24 . ? 1_555 ? 3 AC1 24 GLY A 30 ? GLY A 25 . ? 1_555 ? 4 AC1 24 LYS A 31 ? LYS A 26 . ? 1_555 ? 5 AC1 24 SER A 32 ? SER A 27 . ? 1_555 ? 6 AC1 24 ALA A 33 ? ALA A 28 . ? 1_555 ? 7 AC1 24 PHE A 43 ? PHE A 38 . ? 1_555 ? 8 AC1 24 ASP A 45 ? ASP A 40 . ? 1_555 ? 9 AC1 24 ASN A 131 ? ASN A 126 . ? 1_555 ? 10 AC1 24 LYS A 132 ? LYS A 127 . ? 1_555 ? 11 AC1 24 ASP A 134 ? ASP A 129 . ? 1_555 ? 12 AC1 24 LEU A 135 ? LEU A 130 . ? 1_555 ? 13 AC1 24 SER A 161 ? SER A 156 . ? 1_555 ? 14 AC1 24 ALA A 162 ? ALA A 157 . ? 1_555 ? 15 AC1 24 MG C . ? MG A 180 . ? 1_555 ? 16 AC1 24 HOH D . ? HOH A 1001 . ? 1_555 ? 17 AC1 24 HOH D . ? HOH A 1002 . ? 1_555 ? 18 AC1 24 HOH D . ? HOH A 1004 . ? 1_555 ? 19 AC1 24 HOH D . ? HOH A 1032 . ? 1_555 ? 20 AC1 24 HOH D . ? HOH A 1042 . ? 1_555 ? 21 AC1 24 HOH D . ? HOH A 1046 . ? 1_555 ? 22 AC1 24 HOH D . ? HOH A 1118 . ? 1_555 ? 23 AC1 24 HOH D . ? HOH A 1119 . ? 1_555 ? 24 AC1 24 HOH D . ? HOH A 1130 . ? 1_555 ? 25 AC2 6 SER A 32 ? SER A 27 . ? 1_555 ? 26 AC2 6 GDP B . ? GDP A 179 . ? 1_555 ? 27 AC2 6 HOH D . ? HOH A 1001 . ? 1_555 ? 28 AC2 6 HOH D . ? HOH A 1002 . ? 1_555 ? 29 AC2 6 HOH D . ? HOH A 1003 . ? 1_555 ? 30 AC2 6 HOH D . ? HOH A 1004 . ? 1_555 ? # _database_PDB_matrix.entry_id 3KKQ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3KKQ _atom_sites.fract_transf_matrix[1][1] 0.015397 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014133 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023018 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -4 ? ? ? A . n A 1 2 PRO 2 -3 ? ? ? A . n A 1 3 LEU 3 -2 ? ? ? A . n A 1 4 GLY 4 -1 ? ? ? A . n A 1 5 SER 5 0 ? ? ? A . n A 1 6 MET 6 1 ? ? ? A . n A 1 7 ALA 7 2 ? ? ? A . n A 1 8 THR 8 3 ? ? ? A . n A 1 9 SER 9 4 ? ? ? A . n A 1 10 ALA 10 5 ? ? ? A . n A 1 11 VAL 11 6 ? ? ? A . n A 1 12 PRO 12 7 ? ? ? A . n A 1 13 SER 13 8 ? ? ? A . n A 1 14 GLU 14 9 9 GLU GLU A . n A 1 15 ASN 15 10 10 ASN ASN A . n A 1 16 LEU 16 11 11 LEU LEU A . n A 1 17 PRO 17 12 12 PRO PRO A . n A 1 18 THR 18 13 13 THR THR A . n A 1 19 TYR 19 14 14 TYR TYR A . n A 1 20 LYS 20 15 15 LYS LYS A . n A 1 21 LEU 21 16 16 LEU LEU A . n A 1 22 VAL 22 17 17 VAL VAL A . n A 1 23 VAL 23 18 18 VAL VAL A . n A 1 24 VAL 24 19 19 VAL VAL A . n A 1 25 GLY 25 20 20 GLY GLY A . n A 1 26 ASP 26 21 21 ASP ASP A . n A 1 27 GLY 27 22 22 GLY GLY A . n A 1 28 GLY 28 23 23 GLY GLY A . n A 1 29 VAL 29 24 24 VAL VAL A . n A 1 30 GLY 30 25 25 GLY GLY A . n A 1 31 LYS 31 26 26 LYS LYS A . n A 1 32 SER 32 27 27 SER SER A . n A 1 33 ALA 33 28 28 ALA ALA A . n A 1 34 LEU 34 29 29 LEU LEU A . n A 1 35 THR 35 30 30 THR THR A . n A 1 36 ILE 36 31 31 ILE ILE A . n A 1 37 GLN 37 32 32 GLN GLN A . n A 1 38 PHE 38 33 33 PHE PHE A . n A 1 39 PHE 39 34 34 PHE PHE A . n A 1 40 GLN 40 35 35 GLN GLN A . n A 1 41 LYS 41 36 36 LYS LYS A . n A 1 42 ILE 42 37 37 ILE ILE A . n A 1 43 PHE 43 38 38 PHE PHE A . n A 1 44 VAL 44 39 39 VAL VAL A . n A 1 45 ASP 45 40 40 ASP ASP A . n A 1 46 ASP 46 41 41 ASP ASP A . n A 1 47 TYR 47 42 42 TYR TYR A . n A 1 48 ASP 48 43 43 ASP ASP A . n A 1 49 PRO 49 44 44 PRO PRO A . n A 1 50 THR 50 45 45 THR THR A . n A 1 51 ILE 51 46 46 ILE ILE A . n A 1 52 GLU 52 47 47 GLU GLU A . n A 1 53 ASP 53 48 48 ASP ASP A . n A 1 54 SER 54 49 49 SER SER A . n A 1 55 TYR 55 50 50 TYR TYR A . n A 1 56 LEU 56 51 51 LEU LEU A . n A 1 57 LYS 57 52 52 LYS LYS A . n A 1 58 HIS 58 53 53 HIS HIS A . n A 1 59 THR 59 54 54 THR THR A . n A 1 60 GLU 60 55 55 GLU GLU A . n A 1 61 ILE 61 56 56 ILE ILE A . n A 1 62 ASP 62 57 57 ASP ASP A . n A 1 63 ASN 63 58 58 ASN ASN A . n A 1 64 GLN 64 59 59 GLN GLN A . n A 1 65 TRP 65 60 60 TRP TRP A . n A 1 66 ALA 66 61 61 ALA ALA A . n A 1 67 ILE 67 62 62 ILE ILE A . n A 1 68 LEU 68 63 63 LEU LEU A . n A 1 69 ASP 69 64 64 ASP ASP A . n A 1 70 VAL 70 65 65 VAL VAL A . n A 1 71 LEU 71 66 66 LEU LEU A . n A 1 72 ASP 72 67 67 ASP ASP A . n A 1 73 THR 73 68 68 THR THR A . n A 1 74 ALA 74 69 69 ALA ALA A . n A 1 75 GLY 75 70 70 GLY GLY A . n A 1 76 GLN 76 71 71 GLN GLN A . n A 1 77 GLU 77 72 72 GLU GLU A . n A 1 78 GLU 78 73 73 GLU GLU A . n A 1 79 PHE 79 74 74 PHE PHE A . n A 1 80 SER 80 75 75 SER SER A . n A 1 81 ALA 81 76 76 ALA ALA A . n A 1 82 MET 82 77 77 MET MET A . n A 1 83 ARG 83 78 78 ARG ARG A . n A 1 84 GLU 84 79 79 GLU GLU A . n A 1 85 GLN 85 80 80 GLN GLN A . n A 1 86 TYR 86 81 81 TYR TYR A . n A 1 87 MET 87 82 82 MET MET A . n A 1 88 ARG 88 83 83 ARG ARG A . n A 1 89 THR 89 84 84 THR THR A . n A 1 90 GLY 90 85 85 GLY GLY A . n A 1 91 ASP 91 86 86 ASP ASP A . n A 1 92 GLY 92 87 87 GLY GLY A . n A 1 93 PHE 93 88 88 PHE PHE A . n A 1 94 LEU 94 89 89 LEU LEU A . n A 1 95 ILE 95 90 90 ILE ILE A . n A 1 96 VAL 96 91 91 VAL VAL A . n A 1 97 TYR 97 92 92 TYR TYR A . n A 1 98 SER 98 93 93 SER SER A . n A 1 99 VAL 99 94 94 VAL VAL A . n A 1 100 THR 100 95 95 THR THR A . n A 1 101 ASP 101 96 96 ASP ASP A . n A 1 102 LYS 102 97 97 LYS LYS A . n A 1 103 ALA 103 98 98 ALA ALA A . n A 1 104 SER 104 99 99 SER SER A . n A 1 105 PHE 105 100 100 PHE PHE A . n A 1 106 GLU 106 101 101 GLU GLU A . n A 1 107 HIS 107 102 102 HIS HIS A . n A 1 108 VAL 108 103 103 VAL VAL A . n A 1 109 ASP 109 104 104 ASP ASP A . n A 1 110 ARG 110 105 105 ARG ARG A . n A 1 111 PHE 111 106 106 PHE PHE A . n A 1 112 HIS 112 107 107 HIS HIS A . n A 1 113 GLN 113 108 108 GLN GLN A . n A 1 114 LEU 114 109 109 LEU LEU A . n A 1 115 ILE 115 110 110 ILE ILE A . n A 1 116 LEU 116 111 111 LEU LEU A . n A 1 117 ARG 117 112 112 ARG ARG A . n A 1 118 VAL 118 113 113 VAL VAL A . n A 1 119 LYS 119 114 114 LYS LYS A . n A 1 120 ASP 120 115 115 ASP ASP A . n A 1 121 ARG 121 116 116 ARG ARG A . n A 1 122 GLU 122 117 117 GLU GLU A . n A 1 123 SER 123 118 118 SER SER A . n A 1 124 PHE 124 119 119 PHE PHE A . n A 1 125 PRO 125 120 120 PRO PRO A . n A 1 126 MET 126 121 121 MET MET A . n A 1 127 ILE 127 122 122 ILE ILE A . n A 1 128 LEU 128 123 123 LEU LEU A . n A 1 129 VAL 129 124 124 VAL VAL A . n A 1 130 ALA 130 125 125 ALA ALA A . n A 1 131 ASN 131 126 126 ASN ASN A . n A 1 132 LYS 132 127 127 LYS LYS A . n A 1 133 VAL 133 128 128 VAL VAL A . n A 1 134 ASP 134 129 129 ASP ASP A . n A 1 135 LEU 135 130 130 LEU LEU A . n A 1 136 MET 136 131 131 MET MET A . n A 1 137 HIS 137 132 132 HIS HIS A . n A 1 138 LEU 138 133 133 LEU LEU A . n A 1 139 ARG 139 134 134 ARG ARG A . n A 1 140 LYS 140 135 135 LYS LYS A . n A 1 141 VAL 141 136 136 VAL VAL A . n A 1 142 THR 142 137 137 THR THR A . n A 1 143 ARG 143 138 138 ARG ARG A . n A 1 144 ASP 144 139 139 ASP ASP A . n A 1 145 GLN 145 140 140 GLN GLN A . n A 1 146 GLY 146 141 141 GLY GLY A . n A 1 147 LYS 147 142 142 LYS LYS A . n A 1 148 GLU 148 143 143 GLU GLU A . n A 1 149 MET 149 144 144 MET MET A . n A 1 150 ALA 150 145 145 ALA ALA A . n A 1 151 THR 151 146 146 THR THR A . n A 1 152 LYS 152 147 147 LYS LYS A . n A 1 153 TYR 153 148 148 TYR TYR A . n A 1 154 ASN 154 149 149 ASN ASN A . n A 1 155 ILE 155 150 150 ILE ILE A . n A 1 156 PRO 156 151 151 PRO PRO A . n A 1 157 TYR 157 152 152 TYR TYR A . n A 1 158 ILE 158 153 153 ILE ILE A . n A 1 159 GLU 159 154 154 GLU GLU A . n A 1 160 THR 160 155 155 THR THR A . n A 1 161 SER 161 156 156 SER SER A . n A 1 162 ALA 162 157 157 ALA ALA A . n A 1 163 LYS 163 158 158 LYS LYS A . n A 1 164 ASP 164 159 159 ASP ASP A . n A 1 165 PRO 165 160 160 PRO PRO A . n A 1 166 PRO 166 161 161 PRO PRO A . n A 1 167 LEU 167 162 162 LEU LEU A . n A 1 168 ASN 168 163 163 ASN ASN A . n A 1 169 VAL 169 164 164 VAL VAL A . n A 1 170 ASP 170 165 165 ASP ASP A . n A 1 171 LYS 171 166 166 LYS LYS A . n A 1 172 THR 172 167 167 THR THR A . n A 1 173 PHE 173 168 168 PHE PHE A . n A 1 174 HIS 174 169 169 HIS HIS A . n A 1 175 ASP 175 170 170 ASP ASP A . n A 1 176 LEU 176 171 171 LEU LEU A . n A 1 177 VAL 177 172 172 VAL VAL A . n A 1 178 ARG 178 173 173 ARG ARG A . n A 1 179 VAL 179 174 174 VAL VAL A . n A 1 180 ILE 180 175 175 ILE ILE A . n A 1 181 ARG 181 176 176 ARG ARG A . n A 1 182 GLN 182 177 177 GLN GLN A . n A 1 183 GLN 183 178 178 GLN GLN A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GDP 1 179 179 GDP GDP A . C 3 MG 1 180 180 MG MG A . D 4 HOH 1 1001 1001 HOH HOH A . D 4 HOH 2 1002 1002 HOH HOH A . D 4 HOH 3 1003 1003 HOH HOH A . D 4 HOH 4 1004 1004 HOH HOH A . D 4 HOH 5 1005 1005 HOH HOH A . D 4 HOH 6 1006 1006 HOH HOH A . D 4 HOH 7 1007 1007 HOH HOH A . D 4 HOH 8 1008 1008 HOH HOH A . D 4 HOH 9 1009 1009 HOH HOH A . D 4 HOH 10 1010 1010 HOH HOH A . D 4 HOH 11 1011 1011 HOH HOH A . D 4 HOH 12 1012 1012 HOH HOH A . D 4 HOH 13 1013 1013 HOH HOH A . D 4 HOH 14 1014 1014 HOH HOH A . D 4 HOH 15 1015 1015 HOH HOH A . D 4 HOH 16 1016 1016 HOH HOH A . D 4 HOH 17 1017 1017 HOH HOH A . D 4 HOH 18 1018 1018 HOH HOH A . D 4 HOH 19 1019 1019 HOH HOH A . D 4 HOH 20 1020 1020 HOH HOH A . D 4 HOH 21 1021 1021 HOH HOH A . D 4 HOH 22 1022 1022 HOH HOH A . D 4 HOH 23 1023 1023 HOH HOH A . D 4 HOH 24 1024 1024 HOH HOH A . D 4 HOH 25 1025 1025 HOH HOH A . D 4 HOH 26 1026 1026 HOH HOH A . D 4 HOH 27 1027 1027 HOH HOH A . D 4 HOH 28 1028 1028 HOH HOH A . D 4 HOH 29 1029 1029 HOH HOH A . D 4 HOH 30 1030 1030 HOH HOH A . D 4 HOH 31 1031 1031 HOH HOH A . D 4 HOH 32 1032 1032 HOH HOH A . D 4 HOH 33 1033 1033 HOH HOH A . D 4 HOH 34 1034 1034 HOH HOH A . D 4 HOH 35 1035 1035 HOH HOH A . D 4 HOH 36 1036 1036 HOH HOH A . D 4 HOH 37 1037 1037 HOH HOH A . D 4 HOH 38 1038 1038 HOH HOH A . D 4 HOH 39 1039 1039 HOH HOH A . D 4 HOH 40 1040 1040 HOH HOH A . D 4 HOH 41 1041 1041 HOH HOH A . D 4 HOH 42 1042 1042 HOH HOH A . D 4 HOH 43 1043 1043 HOH HOH A . D 4 HOH 44 1044 1044 HOH HOH A . D 4 HOH 45 1045 1045 HOH HOH A . D 4 HOH 46 1046 1046 HOH HOH A . D 4 HOH 47 1047 1047 HOH HOH A . D 4 HOH 48 1048 1048 HOH HOH A . D 4 HOH 49 1049 1049 HOH HOH A . D 4 HOH 50 1050 1050 HOH HOH A . D 4 HOH 51 1051 1051 HOH HOH A . D 4 HOH 52 1052 1052 HOH HOH A . D 4 HOH 53 1053 1053 HOH HOH A . D 4 HOH 54 1054 1054 HOH HOH A . D 4 HOH 55 1055 1055 HOH HOH A . D 4 HOH 56 1056 1056 HOH HOH A . D 4 HOH 57 1057 1057 HOH HOH A . D 4 HOH 58 1058 1058 HOH HOH A . D 4 HOH 59 1059 1059 HOH HOH A . D 4 HOH 60 1060 1060 HOH HOH A . D 4 HOH 61 1061 1061 HOH HOH A . D 4 HOH 62 1062 1062 HOH HOH A . D 4 HOH 63 1063 1063 HOH HOH A . D 4 HOH 64 1064 1064 HOH HOH A . D 4 HOH 65 1065 1065 HOH HOH A . D 4 HOH 66 1066 1066 HOH HOH A . D 4 HOH 67 1067 1067 HOH HOH A . D 4 HOH 68 1068 1068 HOH HOH A . D 4 HOH 69 1069 1069 HOH HOH A . D 4 HOH 70 1070 1070 HOH HOH A . D 4 HOH 71 1071 1071 HOH HOH A . D 4 HOH 72 1072 1072 HOH HOH A . D 4 HOH 73 1073 1073 HOH HOH A . D 4 HOH 74 1074 1074 HOH HOH A . D 4 HOH 75 1075 1075 HOH HOH A . D 4 HOH 76 1076 1076 HOH HOH A . D 4 HOH 77 1077 1077 HOH HOH A . D 4 HOH 78 1078 1078 HOH HOH A . D 4 HOH 79 1079 1079 HOH HOH A . D 4 HOH 80 1080 1080 HOH HOH A . D 4 HOH 81 1081 1081 HOH HOH A . D 4 HOH 82 1082 1082 HOH HOH A . D 4 HOH 83 1083 1083 HOH HOH A . D 4 HOH 84 1084 1084 HOH HOH A . D 4 HOH 85 1085 1085 HOH HOH A . D 4 HOH 86 1086 1086 HOH HOH A . D 4 HOH 87 1087 1087 HOH HOH A . D 4 HOH 88 1088 1088 HOH HOH A . D 4 HOH 89 1089 1089 HOH HOH A . D 4 HOH 90 1090 1090 HOH HOH A . D 4 HOH 91 1091 1091 HOH HOH A . D 4 HOH 92 1092 1092 HOH HOH A . D 4 HOH 93 1093 1093 HOH HOH A . D 4 HOH 94 1094 1094 HOH HOH A . D 4 HOH 95 1095 1095 HOH HOH A . D 4 HOH 96 1096 1096 HOH HOH A . D 4 HOH 97 1097 1097 HOH HOH A . D 4 HOH 98 1098 1098 HOH HOH A . D 4 HOH 99 1099 1099 HOH HOH A . D 4 HOH 100 1100 1100 HOH HOH A . D 4 HOH 101 1101 1101 HOH HOH A . D 4 HOH 102 1102 1102 HOH HOH A . D 4 HOH 103 1103 1103 HOH HOH A . D 4 HOH 104 1104 1104 HOH HOH A . D 4 HOH 105 1105 1105 HOH HOH A . D 4 HOH 106 1106 1106 HOH HOH A . D 4 HOH 107 1107 1107 HOH HOH A . D 4 HOH 108 1108 1108 HOH HOH A . D 4 HOH 109 1109 1109 HOH HOH A . D 4 HOH 110 1110 1110 HOH HOH A . D 4 HOH 111 1111 1111 HOH HOH A . D 4 HOH 112 1112 1112 HOH HOH A . D 4 HOH 113 1113 1113 HOH HOH A . D 4 HOH 114 1114 1114 HOH HOH A . D 4 HOH 115 1115 1115 HOH HOH A . D 4 HOH 116 1116 1116 HOH HOH A . D 4 HOH 117 1117 1117 HOH HOH A . D 4 HOH 118 1118 1118 HOH HOH A . D 4 HOH 119 1119 1119 HOH HOH A . D 4 HOH 120 1120 1120 HOH HOH A . D 4 HOH 121 1121 1121 HOH HOH A . D 4 HOH 122 1122 1122 HOH HOH A . D 4 HOH 123 1123 1123 HOH HOH A . D 4 HOH 124 1124 1124 HOH HOH A . D 4 HOH 125 1125 1125 HOH HOH A . D 4 HOH 126 1126 1126 HOH HOH A . D 4 HOH 127 1127 1127 HOH HOH A . D 4 HOH 128 1128 1128 HOH HOH A . D 4 HOH 129 1129 1129 HOH HOH A . D 4 HOH 130 1130 1130 HOH HOH A . D 4 HOH 131 1131 1131 HOH HOH A . D 4 HOH 132 1132 1132 HOH HOH A . D 4 HOH 133 1133 1133 HOH HOH A . D 4 HOH 134 1134 1134 HOH HOH A . D 4 HOH 135 1135 1135 HOH HOH A . D 4 HOH 136 1136 1136 HOH HOH A . D 4 HOH 137 1137 1137 HOH HOH A . D 4 HOH 138 1138 1138 HOH HOH A . D 4 HOH 139 1139 1139 HOH HOH A . D 4 HOH 140 1140 1140 HOH HOH A . D 4 HOH 141 1141 1141 HOH HOH A . D 4 HOH 142 1142 1142 HOH HOH A . D 4 HOH 143 1143 1143 HOH HOH A . D 4 HOH 144 1144 1144 HOH HOH A . D 4 HOH 145 1145 1145 HOH HOH A . D 4 HOH 146 1146 1146 HOH HOH A . D 4 HOH 147 1147 1147 HOH HOH A . D 4 HOH 148 1148 1148 HOH HOH A . D 4 HOH 149 1149 1149 HOH HOH A . D 4 HOH 150 1150 1150 HOH HOH A . D 4 HOH 151 1151 1151 HOH HOH A . D 4 HOH 152 1152 1152 HOH HOH A . D 4 HOH 153 1153 1153 HOH HOH A . D 4 HOH 154 1154 1154 HOH HOH A . D 4 HOH 155 1155 1155 HOH HOH A . D 4 HOH 156 1156 1156 HOH HOH A . D 4 HOH 157 1157 1157 HOH HOH A . D 4 HOH 158 1158 1158 HOH HOH A . D 4 HOH 159 1159 1159 HOH HOH A . D 4 HOH 160 1160 1160 HOH HOH A . D 4 HOH 161 1161 1161 HOH HOH A . D 4 HOH 162 1162 1162 HOH HOH A . D 4 HOH 163 1163 1163 HOH HOH A . D 4 HOH 164 1164 1164 HOH HOH A . D 4 HOH 165 1165 1165 HOH HOH A . D 4 HOH 166 1166 1166 HOH HOH A . D 4 HOH 167 1167 1167 HOH HOH A . D 4 HOH 168 1168 1168 HOH HOH A . D 4 HOH 169 1169 1169 HOH HOH A . D 4 HOH 170 1170 1170 HOH HOH A . D 4 HOH 171 1171 1171 HOH HOH A . D 4 HOH 172 1172 1172 HOH HOH A . D 4 HOH 173 1173 1173 HOH HOH A . D 4 HOH 174 1174 1174 HOH HOH A . D 4 HOH 175 1175 1175 HOH HOH A . D 4 HOH 176 1176 1176 HOH HOH A . D 4 HOH 177 1177 1177 HOH HOH A . D 4 HOH 178 1178 1178 HOH HOH A . D 4 HOH 179 1179 1179 HOH HOH A . D 4 HOH 180 1180 1180 HOH HOH A . D 4 HOH 181 1181 1181 HOH HOH A . D 4 HOH 182 1182 1182 HOH HOH A . D 4 HOH 183 1183 1183 HOH HOH A . D 4 HOH 184 1184 1184 HOH HOH A . D 4 HOH 185 1185 1185 HOH HOH A . D 4 HOH 186 1186 1186 HOH HOH A . D 4 HOH 187 1187 1187 HOH HOH A . D 4 HOH 188 1188 1188 HOH HOH A . D 4 HOH 189 1189 1189 HOH HOH A . D 4 HOH 190 1190 1190 HOH HOH A . D 4 HOH 191 1191 1191 HOH HOH A . D 4 HOH 192 1192 1192 HOH HOH A . D 4 HOH 193 1193 1193 HOH HOH A . D 4 HOH 194 1194 1194 HOH HOH A . D 4 HOH 195 1195 1195 HOH HOH A . D 4 HOH 196 1196 1196 HOH HOH A . D 4 HOH 197 1197 1197 HOH HOH A . D 4 HOH 198 1198 1198 HOH HOH A . D 4 HOH 199 1199 1199 HOH HOH A . D 4 HOH 200 1200 1200 HOH HOH A . D 4 HOH 201 1201 1201 HOH HOH A . D 4 HOH 202 1202 1202 HOH HOH A . D 4 HOH 203 1203 1203 HOH HOH A . D 4 HOH 204 1204 1204 HOH HOH A . D 4 HOH 205 1205 1205 HOH HOH A . D 4 HOH 206 1206 1206 HOH HOH A . D 4 HOH 207 1207 1207 HOH HOH A . D 4 HOH 208 1208 1208 HOH HOH A . D 4 HOH 209 1209 1209 HOH HOH A . D 4 HOH 210 1210 1210 HOH HOH A . D 4 HOH 211 1211 1211 HOH HOH A . D 4 HOH 212 1212 1212 HOH HOH A . D 4 HOH 213 1213 1213 HOH HOH A . D 4 HOH 214 1214 1214 HOH HOH A . D 4 HOH 215 1215 1215 HOH HOH A . D 4 HOH 216 1216 1216 HOH HOH A . D 4 HOH 217 1217 1217 HOH HOH A . D 4 HOH 218 1218 1218 HOH HOH A . D 4 HOH 219 1219 1219 HOH HOH A . D 4 HOH 220 1220 1220 HOH HOH A . D 4 HOH 221 1221 1221 HOH HOH A . D 4 HOH 222 1222 1222 HOH HOH A . D 4 HOH 223 1223 1223 HOH HOH A . D 4 HOH 224 1224 1224 HOH HOH A . D 4 HOH 225 1225 1225 HOH HOH A . D 4 HOH 226 1226 1226 HOH HOH A . D 4 HOH 227 1227 1227 HOH HOH A . D 4 HOH 228 1228 1228 HOH HOH A . D 4 HOH 229 1229 1229 HOH HOH A . D 4 HOH 230 1230 1230 HOH HOH A . D 4 HOH 231 1231 1231 HOH HOH A . D 4 HOH 232 1232 1232 HOH HOH A . D 4 HOH 233 1233 1233 HOH HOH A . D 4 HOH 234 1234 1234 HOH HOH A . D 4 HOH 235 1235 1235 HOH HOH A . D 4 HOH 236 1236 1236 HOH HOH A . D 4 HOH 237 1237 1237 HOH HOH A . D 4 HOH 238 1238 1238 HOH HOH A . D 4 HOH 239 1239 1239 HOH HOH A . D 4 HOH 240 1240 1240 HOH HOH A . D 4 HOH 241 1241 1241 HOH HOH A . D 4 HOH 242 1242 1242 HOH HOH A . D 4 HOH 243 1243 1243 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 1146 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG ? A SER 32 ? A SER 27 ? 1_555 MG ? C MG . ? A MG 180 ? 1_555 O2B ? B GDP . ? A GDP 179 ? 1_555 92.2 ? 2 OG ? A SER 32 ? A SER 27 ? 1_555 MG ? C MG . ? A MG 180 ? 1_555 O ? D HOH . ? A HOH 1001 ? 1_555 83.5 ? 3 O2B ? B GDP . ? A GDP 179 ? 1_555 MG ? C MG . ? A MG 180 ? 1_555 O ? D HOH . ? A HOH 1001 ? 1_555 94.1 ? 4 OG ? A SER 32 ? A SER 27 ? 1_555 MG ? C MG . ? A MG 180 ? 1_555 O ? D HOH . ? A HOH 1002 ? 1_555 92.7 ? 5 O2B ? B GDP . ? A GDP 179 ? 1_555 MG ? C MG . ? A MG 180 ? 1_555 O ? D HOH . ? A HOH 1002 ? 1_555 86.1 ? 6 O ? D HOH . ? A HOH 1001 ? 1_555 MG ? C MG . ? A MG 180 ? 1_555 O ? D HOH . ? A HOH 1002 ? 1_555 176.2 ? 7 OG ? A SER 32 ? A SER 27 ? 1_555 MG ? C MG . ? A MG 180 ? 1_555 O ? D HOH . ? A HOH 1003 ? 1_555 92.3 ? 8 O2B ? B GDP . ? A GDP 179 ? 1_555 MG ? C MG . ? A MG 180 ? 1_555 O ? D HOH . ? A HOH 1003 ? 1_555 169.6 ? 9 O ? D HOH . ? A HOH 1001 ? 1_555 MG ? C MG . ? A MG 180 ? 1_555 O ? D HOH . ? A HOH 1003 ? 1_555 95.8 ? 10 O ? D HOH . ? A HOH 1002 ? 1_555 MG ? C MG . ? A MG 180 ? 1_555 O ? D HOH . ? A HOH 1003 ? 1_555 84.3 ? 11 OG ? A SER 32 ? A SER 27 ? 1_555 MG ? C MG . ? A MG 180 ? 1_555 O ? D HOH . ? A HOH 1004 ? 1_555 172.9 ? 12 O2B ? B GDP . ? A GDP 179 ? 1_555 MG ? C MG . ? A MG 180 ? 1_555 O ? D HOH . ? A HOH 1004 ? 1_555 90.1 ? 13 O ? D HOH . ? A HOH 1001 ? 1_555 MG ? C MG . ? A MG 180 ? 1_555 O ? D HOH . ? A HOH 1004 ? 1_555 89.7 ? 14 O ? D HOH . ? A HOH 1002 ? 1_555 MG ? C MG . ? A MG 180 ? 1_555 O ? D HOH . ? A HOH 1004 ? 1_555 94.1 ? 15 O ? D HOH . ? A HOH 1003 ? 1_555 MG ? C MG . ? A MG 180 ? 1_555 O ? D HOH . ? A HOH 1004 ? 1_555 86.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-06-16 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2014-02-12 4 'Structure model' 1 3 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_ref_seq_dif 8 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.value' 16 4 'Structure model' '_struct_conn.pdbx_dist_value' 17 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 18 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 19 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 20 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 23 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 24 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 25 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 26 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 28 4 'Structure model' '_struct_ref_seq_dif.details' 29 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 30 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 31 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal BSS 'data collection' . ? 1 CNS refinement . ? 2 REFMAC refinement 5.2.0005 ? 3 MOSFLM 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 CNS phasing . ? 6 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OH _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 TYR _pdbx_validate_close_contact.auth_seq_id_1 42 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OD1 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 ASP _pdbx_validate_close_contact.auth_seq_id_2 48 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.94 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id MET _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 131 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -103.34 _pdbx_validate_torsion.psi -63.19 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -4 ? A GLY 1 2 1 Y 1 A PRO -3 ? A PRO 2 3 1 Y 1 A LEU -2 ? A LEU 3 4 1 Y 1 A GLY -1 ? A GLY 4 5 1 Y 1 A SER 0 ? A SER 5 6 1 Y 1 A MET 1 ? A MET 6 7 1 Y 1 A ALA 2 ? A ALA 7 8 1 Y 1 A THR 3 ? A THR 8 9 1 Y 1 A SER 4 ? A SER 9 10 1 Y 1 A ALA 5 ? A ALA 10 11 1 Y 1 A VAL 6 ? A VAL 11 12 1 Y 1 A PRO 7 ? A PRO 12 13 1 Y 1 A SER 8 ? A SER 13 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GDP PB P N N 74 GDP O1B O N N 75 GDP O2B O N N 76 GDP O3B O N N 77 GDP O3A O N N 78 GDP PA P N N 79 GDP O1A O N N 80 GDP O2A O N N 81 GDP "O5'" O N N 82 GDP "C5'" C N N 83 GDP "C4'" C N R 84 GDP "O4'" O N N 85 GDP "C3'" C N S 86 GDP "O3'" O N N 87 GDP "C2'" C N R 88 GDP "O2'" O N N 89 GDP "C1'" C N R 90 GDP N9 N Y N 91 GDP C8 C Y N 92 GDP N7 N Y N 93 GDP C5 C Y N 94 GDP C6 C N N 95 GDP O6 O N N 96 GDP N1 N N N 97 GDP C2 C N N 98 GDP N2 N N N 99 GDP N3 N N N 100 GDP C4 C Y N 101 GDP HOB2 H N N 102 GDP HOB3 H N N 103 GDP HOA2 H N N 104 GDP "H5'" H N N 105 GDP "H5''" H N N 106 GDP "H4'" H N N 107 GDP "H3'" H N N 108 GDP "HO3'" H N N 109 GDP "H2'" H N N 110 GDP "HO2'" H N N 111 GDP "H1'" H N N 112 GDP H8 H N N 113 GDP HN1 H N N 114 GDP HN21 H N N 115 GDP HN22 H N N 116 GLN N N N N 117 GLN CA C N S 118 GLN C C N N 119 GLN O O N N 120 GLN CB C N N 121 GLN CG C N N 122 GLN CD C N N 123 GLN OE1 O N N 124 GLN NE2 N N N 125 GLN OXT O N N 126 GLN H H N N 127 GLN H2 H N N 128 GLN HA H N N 129 GLN HB2 H N N 130 GLN HB3 H N N 131 GLN HG2 H N N 132 GLN HG3 H N N 133 GLN HE21 H N N 134 GLN HE22 H N N 135 GLN HXT H N N 136 GLU N N N N 137 GLU CA C N S 138 GLU C C N N 139 GLU O O N N 140 GLU CB C N N 141 GLU CG C N N 142 GLU CD C N N 143 GLU OE1 O N N 144 GLU OE2 O N N 145 GLU OXT O N N 146 GLU H H N N 147 GLU H2 H N N 148 GLU HA H N N 149 GLU HB2 H N N 150 GLU HB3 H N N 151 GLU HG2 H N N 152 GLU HG3 H N N 153 GLU HE2 H N N 154 GLU HXT H N N 155 GLY N N N N 156 GLY CA C N N 157 GLY C C N N 158 GLY O O N N 159 GLY OXT O N N 160 GLY H H N N 161 GLY H2 H N N 162 GLY HA2 H N N 163 GLY HA3 H N N 164 GLY HXT H N N 165 HIS N N N N 166 HIS CA C N S 167 HIS C C N N 168 HIS O O N N 169 HIS CB C N N 170 HIS CG C Y N 171 HIS ND1 N Y N 172 HIS CD2 C Y N 173 HIS CE1 C Y N 174 HIS NE2 N Y N 175 HIS OXT O N N 176 HIS H H N N 177 HIS H2 H N N 178 HIS HA H N N 179 HIS HB2 H N N 180 HIS HB3 H N N 181 HIS HD1 H N N 182 HIS HD2 H N N 183 HIS HE1 H N N 184 HIS HE2 H N N 185 HIS HXT H N N 186 HOH O O N N 187 HOH H1 H N N 188 HOH H2 H N N 189 ILE N N N N 190 ILE CA C N S 191 ILE C C N N 192 ILE O O N N 193 ILE CB C N S 194 ILE CG1 C N N 195 ILE CG2 C N N 196 ILE CD1 C N N 197 ILE OXT O N N 198 ILE H H N N 199 ILE H2 H N N 200 ILE HA H N N 201 ILE HB H N N 202 ILE HG12 H N N 203 ILE HG13 H N N 204 ILE HG21 H N N 205 ILE HG22 H N N 206 ILE HG23 H N N 207 ILE HD11 H N N 208 ILE HD12 H N N 209 ILE HD13 H N N 210 ILE HXT H N N 211 LEU N N N N 212 LEU CA C N S 213 LEU C C N N 214 LEU O O N N 215 LEU CB C N N 216 LEU CG C N N 217 LEU CD1 C N N 218 LEU CD2 C N N 219 LEU OXT O N N 220 LEU H H N N 221 LEU H2 H N N 222 LEU HA H N N 223 LEU HB2 H N N 224 LEU HB3 H N N 225 LEU HG H N N 226 LEU HD11 H N N 227 LEU HD12 H N N 228 LEU HD13 H N N 229 LEU HD21 H N N 230 LEU HD22 H N N 231 LEU HD23 H N N 232 LEU HXT H N N 233 LYS N N N N 234 LYS CA C N S 235 LYS C C N N 236 LYS O O N N 237 LYS CB C N N 238 LYS CG C N N 239 LYS CD C N N 240 LYS CE C N N 241 LYS NZ N N N 242 LYS OXT O N N 243 LYS H H N N 244 LYS H2 H N N 245 LYS HA H N N 246 LYS HB2 H N N 247 LYS HB3 H N N 248 LYS HG2 H N N 249 LYS HG3 H N N 250 LYS HD2 H N N 251 LYS HD3 H N N 252 LYS HE2 H N N 253 LYS HE3 H N N 254 LYS HZ1 H N N 255 LYS HZ2 H N N 256 LYS HZ3 H N N 257 LYS HXT H N N 258 MET N N N N 259 MET CA C N S 260 MET C C N N 261 MET O O N N 262 MET CB C N N 263 MET CG C N N 264 MET SD S N N 265 MET CE C N N 266 MET OXT O N N 267 MET H H N N 268 MET H2 H N N 269 MET HA H N N 270 MET HB2 H N N 271 MET HB3 H N N 272 MET HG2 H N N 273 MET HG3 H N N 274 MET HE1 H N N 275 MET HE2 H N N 276 MET HE3 H N N 277 MET HXT H N N 278 MG MG MG N N 279 PHE N N N N 280 PHE CA C N S 281 PHE C C N N 282 PHE O O N N 283 PHE CB C N N 284 PHE CG C Y N 285 PHE CD1 C Y N 286 PHE CD2 C Y N 287 PHE CE1 C Y N 288 PHE CE2 C Y N 289 PHE CZ C Y N 290 PHE OXT O N N 291 PHE H H N N 292 PHE H2 H N N 293 PHE HA H N N 294 PHE HB2 H N N 295 PHE HB3 H N N 296 PHE HD1 H N N 297 PHE HD2 H N N 298 PHE HE1 H N N 299 PHE HE2 H N N 300 PHE HZ H N N 301 PHE HXT H N N 302 PRO N N N N 303 PRO CA C N S 304 PRO C C N N 305 PRO O O N N 306 PRO CB C N N 307 PRO CG C N N 308 PRO CD C N N 309 PRO OXT O N N 310 PRO H H N N 311 PRO HA H N N 312 PRO HB2 H N N 313 PRO HB3 H N N 314 PRO HG2 H N N 315 PRO HG3 H N N 316 PRO HD2 H N N 317 PRO HD3 H N N 318 PRO HXT H N N 319 SER N N N N 320 SER CA C N S 321 SER C C N N 322 SER O O N N 323 SER CB C N N 324 SER OG O N N 325 SER OXT O N N 326 SER H H N N 327 SER H2 H N N 328 SER HA H N N 329 SER HB2 H N N 330 SER HB3 H N N 331 SER HG H N N 332 SER HXT H N N 333 THR N N N N 334 THR CA C N S 335 THR C C N N 336 THR O O N N 337 THR CB C N R 338 THR OG1 O N N 339 THR CG2 C N N 340 THR OXT O N N 341 THR H H N N 342 THR H2 H N N 343 THR HA H N N 344 THR HB H N N 345 THR HG1 H N N 346 THR HG21 H N N 347 THR HG22 H N N 348 THR HG23 H N N 349 THR HXT H N N 350 TRP N N N N 351 TRP CA C N S 352 TRP C C N N 353 TRP O O N N 354 TRP CB C N N 355 TRP CG C Y N 356 TRP CD1 C Y N 357 TRP CD2 C Y N 358 TRP NE1 N Y N 359 TRP CE2 C Y N 360 TRP CE3 C Y N 361 TRP CZ2 C Y N 362 TRP CZ3 C Y N 363 TRP CH2 C Y N 364 TRP OXT O N N 365 TRP H H N N 366 TRP H2 H N N 367 TRP HA H N N 368 TRP HB2 H N N 369 TRP HB3 H N N 370 TRP HD1 H N N 371 TRP HE1 H N N 372 TRP HE3 H N N 373 TRP HZ2 H N N 374 TRP HZ3 H N N 375 TRP HH2 H N N 376 TRP HXT H N N 377 TYR N N N N 378 TYR CA C N S 379 TYR C C N N 380 TYR O O N N 381 TYR CB C N N 382 TYR CG C Y N 383 TYR CD1 C Y N 384 TYR CD2 C Y N 385 TYR CE1 C Y N 386 TYR CE2 C Y N 387 TYR CZ C Y N 388 TYR OH O N N 389 TYR OXT O N N 390 TYR H H N N 391 TYR H2 H N N 392 TYR HA H N N 393 TYR HB2 H N N 394 TYR HB3 H N N 395 TYR HD1 H N N 396 TYR HD2 H N N 397 TYR HE1 H N N 398 TYR HE2 H N N 399 TYR HH H N N 400 TYR HXT H N N 401 VAL N N N N 402 VAL CA C N S 403 VAL C C N N 404 VAL O O N N 405 VAL CB C N N 406 VAL CG1 C N N 407 VAL CG2 C N N 408 VAL OXT O N N 409 VAL H H N N 410 VAL H2 H N N 411 VAL HA H N N 412 VAL HB H N N 413 VAL HG11 H N N 414 VAL HG12 H N N 415 VAL HG13 H N N 416 VAL HG21 H N N 417 VAL HG22 H N N 418 VAL HG23 H N N 419 VAL HXT H N N 420 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GDP PB O1B doub N N 70 GDP PB O2B sing N N 71 GDP PB O3B sing N N 72 GDP PB O3A sing N N 73 GDP O2B HOB2 sing N N 74 GDP O3B HOB3 sing N N 75 GDP O3A PA sing N N 76 GDP PA O1A doub N N 77 GDP PA O2A sing N N 78 GDP PA "O5'" sing N N 79 GDP O2A HOA2 sing N N 80 GDP "O5'" "C5'" sing N N 81 GDP "C5'" "C4'" sing N N 82 GDP "C5'" "H5'" sing N N 83 GDP "C5'" "H5''" sing N N 84 GDP "C4'" "O4'" sing N N 85 GDP "C4'" "C3'" sing N N 86 GDP "C4'" "H4'" sing N N 87 GDP "O4'" "C1'" sing N N 88 GDP "C3'" "O3'" sing N N 89 GDP "C3'" "C2'" sing N N 90 GDP "C3'" "H3'" sing N N 91 GDP "O3'" "HO3'" sing N N 92 GDP "C2'" "O2'" sing N N 93 GDP "C2'" "C1'" sing N N 94 GDP "C2'" "H2'" sing N N 95 GDP "O2'" "HO2'" sing N N 96 GDP "C1'" N9 sing N N 97 GDP "C1'" "H1'" sing N N 98 GDP N9 C8 sing Y N 99 GDP N9 C4 sing Y N 100 GDP C8 N7 doub Y N 101 GDP C8 H8 sing N N 102 GDP N7 C5 sing Y N 103 GDP C5 C6 sing N N 104 GDP C5 C4 doub Y N 105 GDP C6 O6 doub N N 106 GDP C6 N1 sing N N 107 GDP N1 C2 sing N N 108 GDP N1 HN1 sing N N 109 GDP C2 N2 sing N N 110 GDP C2 N3 doub N N 111 GDP N2 HN21 sing N N 112 GDP N2 HN22 sing N N 113 GDP N3 C4 sing N N 114 GLN N CA sing N N 115 GLN N H sing N N 116 GLN N H2 sing N N 117 GLN CA C sing N N 118 GLN CA CB sing N N 119 GLN CA HA sing N N 120 GLN C O doub N N 121 GLN C OXT sing N N 122 GLN CB CG sing N N 123 GLN CB HB2 sing N N 124 GLN CB HB3 sing N N 125 GLN CG CD sing N N 126 GLN CG HG2 sing N N 127 GLN CG HG3 sing N N 128 GLN CD OE1 doub N N 129 GLN CD NE2 sing N N 130 GLN NE2 HE21 sing N N 131 GLN NE2 HE22 sing N N 132 GLN OXT HXT sing N N 133 GLU N CA sing N N 134 GLU N H sing N N 135 GLU N H2 sing N N 136 GLU CA C sing N N 137 GLU CA CB sing N N 138 GLU CA HA sing N N 139 GLU C O doub N N 140 GLU C OXT sing N N 141 GLU CB CG sing N N 142 GLU CB HB2 sing N N 143 GLU CB HB3 sing N N 144 GLU CG CD sing N N 145 GLU CG HG2 sing N N 146 GLU CG HG3 sing N N 147 GLU CD OE1 doub N N 148 GLU CD OE2 sing N N 149 GLU OE2 HE2 sing N N 150 GLU OXT HXT sing N N 151 GLY N CA sing N N 152 GLY N H sing N N 153 GLY N H2 sing N N 154 GLY CA C sing N N 155 GLY CA HA2 sing N N 156 GLY CA HA3 sing N N 157 GLY C O doub N N 158 GLY C OXT sing N N 159 GLY OXT HXT sing N N 160 HIS N CA sing N N 161 HIS N H sing N N 162 HIS N H2 sing N N 163 HIS CA C sing N N 164 HIS CA CB sing N N 165 HIS CA HA sing N N 166 HIS C O doub N N 167 HIS C OXT sing N N 168 HIS CB CG sing N N 169 HIS CB HB2 sing N N 170 HIS CB HB3 sing N N 171 HIS CG ND1 sing Y N 172 HIS CG CD2 doub Y N 173 HIS ND1 CE1 doub Y N 174 HIS ND1 HD1 sing N N 175 HIS CD2 NE2 sing Y N 176 HIS CD2 HD2 sing N N 177 HIS CE1 NE2 sing Y N 178 HIS CE1 HE1 sing N N 179 HIS NE2 HE2 sing N N 180 HIS OXT HXT sing N N 181 HOH O H1 sing N N 182 HOH O H2 sing N N 183 ILE N CA sing N N 184 ILE N H sing N N 185 ILE N H2 sing N N 186 ILE CA C sing N N 187 ILE CA CB sing N N 188 ILE CA HA sing N N 189 ILE C O doub N N 190 ILE C OXT sing N N 191 ILE CB CG1 sing N N 192 ILE CB CG2 sing N N 193 ILE CB HB sing N N 194 ILE CG1 CD1 sing N N 195 ILE CG1 HG12 sing N N 196 ILE CG1 HG13 sing N N 197 ILE CG2 HG21 sing N N 198 ILE CG2 HG22 sing N N 199 ILE CG2 HG23 sing N N 200 ILE CD1 HD11 sing N N 201 ILE CD1 HD12 sing N N 202 ILE CD1 HD13 sing N N 203 ILE OXT HXT sing N N 204 LEU N CA sing N N 205 LEU N H sing N N 206 LEU N H2 sing N N 207 LEU CA C sing N N 208 LEU CA CB sing N N 209 LEU CA HA sing N N 210 LEU C O doub N N 211 LEU C OXT sing N N 212 LEU CB CG sing N N 213 LEU CB HB2 sing N N 214 LEU CB HB3 sing N N 215 LEU CG CD1 sing N N 216 LEU CG CD2 sing N N 217 LEU CG HG sing N N 218 LEU CD1 HD11 sing N N 219 LEU CD1 HD12 sing N N 220 LEU CD1 HD13 sing N N 221 LEU CD2 HD21 sing N N 222 LEU CD2 HD22 sing N N 223 LEU CD2 HD23 sing N N 224 LEU OXT HXT sing N N 225 LYS N CA sing N N 226 LYS N H sing N N 227 LYS N H2 sing N N 228 LYS CA C sing N N 229 LYS CA CB sing N N 230 LYS CA HA sing N N 231 LYS C O doub N N 232 LYS C OXT sing N N 233 LYS CB CG sing N N 234 LYS CB HB2 sing N N 235 LYS CB HB3 sing N N 236 LYS CG CD sing N N 237 LYS CG HG2 sing N N 238 LYS CG HG3 sing N N 239 LYS CD CE sing N N 240 LYS CD HD2 sing N N 241 LYS CD HD3 sing N N 242 LYS CE NZ sing N N 243 LYS CE HE2 sing N N 244 LYS CE HE3 sing N N 245 LYS NZ HZ1 sing N N 246 LYS NZ HZ2 sing N N 247 LYS NZ HZ3 sing N N 248 LYS OXT HXT sing N N 249 MET N CA sing N N 250 MET N H sing N N 251 MET N H2 sing N N 252 MET CA C sing N N 253 MET CA CB sing N N 254 MET CA HA sing N N 255 MET C O doub N N 256 MET C OXT sing N N 257 MET CB CG sing N N 258 MET CB HB2 sing N N 259 MET CB HB3 sing N N 260 MET CG SD sing N N 261 MET CG HG2 sing N N 262 MET CG HG3 sing N N 263 MET SD CE sing N N 264 MET CE HE1 sing N N 265 MET CE HE2 sing N N 266 MET CE HE3 sing N N 267 MET OXT HXT sing N N 268 PHE N CA sing N N 269 PHE N H sing N N 270 PHE N H2 sing N N 271 PHE CA C sing N N 272 PHE CA CB sing N N 273 PHE CA HA sing N N 274 PHE C O doub N N 275 PHE C OXT sing N N 276 PHE CB CG sing N N 277 PHE CB HB2 sing N N 278 PHE CB HB3 sing N N 279 PHE CG CD1 doub Y N 280 PHE CG CD2 sing Y N 281 PHE CD1 CE1 sing Y N 282 PHE CD1 HD1 sing N N 283 PHE CD2 CE2 doub Y N 284 PHE CD2 HD2 sing N N 285 PHE CE1 CZ doub Y N 286 PHE CE1 HE1 sing N N 287 PHE CE2 CZ sing Y N 288 PHE CE2 HE2 sing N N 289 PHE CZ HZ sing N N 290 PHE OXT HXT sing N N 291 PRO N CA sing N N 292 PRO N CD sing N N 293 PRO N H sing N N 294 PRO CA C sing N N 295 PRO CA CB sing N N 296 PRO CA HA sing N N 297 PRO C O doub N N 298 PRO C OXT sing N N 299 PRO CB CG sing N N 300 PRO CB HB2 sing N N 301 PRO CB HB3 sing N N 302 PRO CG CD sing N N 303 PRO CG HG2 sing N N 304 PRO CG HG3 sing N N 305 PRO CD HD2 sing N N 306 PRO CD HD3 sing N N 307 PRO OXT HXT sing N N 308 SER N CA sing N N 309 SER N H sing N N 310 SER N H2 sing N N 311 SER CA C sing N N 312 SER CA CB sing N N 313 SER CA HA sing N N 314 SER C O doub N N 315 SER C OXT sing N N 316 SER CB OG sing N N 317 SER CB HB2 sing N N 318 SER CB HB3 sing N N 319 SER OG HG sing N N 320 SER OXT HXT sing N N 321 THR N CA sing N N 322 THR N H sing N N 323 THR N H2 sing N N 324 THR CA C sing N N 325 THR CA CB sing N N 326 THR CA HA sing N N 327 THR C O doub N N 328 THR C OXT sing N N 329 THR CB OG1 sing N N 330 THR CB CG2 sing N N 331 THR CB HB sing N N 332 THR OG1 HG1 sing N N 333 THR CG2 HG21 sing N N 334 THR CG2 HG22 sing N N 335 THR CG2 HG23 sing N N 336 THR OXT HXT sing N N 337 TRP N CA sing N N 338 TRP N H sing N N 339 TRP N H2 sing N N 340 TRP CA C sing N N 341 TRP CA CB sing N N 342 TRP CA HA sing N N 343 TRP C O doub N N 344 TRP C OXT sing N N 345 TRP CB CG sing N N 346 TRP CB HB2 sing N N 347 TRP CB HB3 sing N N 348 TRP CG CD1 doub Y N 349 TRP CG CD2 sing Y N 350 TRP CD1 NE1 sing Y N 351 TRP CD1 HD1 sing N N 352 TRP CD2 CE2 doub Y N 353 TRP CD2 CE3 sing Y N 354 TRP NE1 CE2 sing Y N 355 TRP NE1 HE1 sing N N 356 TRP CE2 CZ2 sing Y N 357 TRP CE3 CZ3 doub Y N 358 TRP CE3 HE3 sing N N 359 TRP CZ2 CH2 doub Y N 360 TRP CZ2 HZ2 sing N N 361 TRP CZ3 CH2 sing Y N 362 TRP CZ3 HZ3 sing N N 363 TRP CH2 HH2 sing N N 364 TRP OXT HXT sing N N 365 TYR N CA sing N N 366 TYR N H sing N N 367 TYR N H2 sing N N 368 TYR CA C sing N N 369 TYR CA CB sing N N 370 TYR CA HA sing N N 371 TYR C O doub N N 372 TYR C OXT sing N N 373 TYR CB CG sing N N 374 TYR CB HB2 sing N N 375 TYR CB HB3 sing N N 376 TYR CG CD1 doub Y N 377 TYR CG CD2 sing Y N 378 TYR CD1 CE1 sing Y N 379 TYR CD1 HD1 sing N N 380 TYR CD2 CE2 doub Y N 381 TYR CD2 HD2 sing N N 382 TYR CE1 CZ doub Y N 383 TYR CE1 HE1 sing N N 384 TYR CE2 CZ sing Y N 385 TYR CE2 HE2 sing N N 386 TYR CZ OH sing N N 387 TYR OH HH sing N N 388 TYR OXT HXT sing N N 389 VAL N CA sing N N 390 VAL N H sing N N 391 VAL N H2 sing N N 392 VAL CA C sing N N 393 VAL CA CB sing N N 394 VAL CA HA sing N N 395 VAL C O doub N N 396 VAL C OXT sing N N 397 VAL CB CG1 sing N N 398 VAL CB CG2 sing N N 399 VAL CB HB sing N N 400 VAL CG1 HG11 sing N N 401 VAL CG1 HG12 sing N N 402 VAL CG1 HG13 sing N N 403 VAL CG2 HG21 sing N N 404 VAL CG2 HG22 sing N N 405 VAL CG2 HG23 sing N N 406 VAL OXT HXT sing N N 407 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "GUANOSINE-5'-DIPHOSPHATE" GDP 3 'MAGNESIUM ION' MG 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1X1R _pdbx_initial_refinement_model.details 'PDB ENTRY 1X1R' #